PSIBLAST alignment of GI: 254781193 and protein with PDB id: 1lv5
>gi|29726425|pdb|1LV5|A Chain A, Crystal Structure Of The Closed Conformation Of Bacillus Dna Polymerase I Fragment Bound To Dna And Dctp Length = 580
>gi|29726426|pdb|1LV5|B Chain B, Crystal Structure Of The Closed Conformation Of Bacillus Dna Polymerase I Fragment Bound To Dna And Dctp Length = 580
Score = 305 bits (782), Expect = 1e-80, Method: Composition-based stats.
Identities = 86/661 (13%), Positives = 177/661 (26%), Gaps = 141/661 (21%)
Query: 33 FAFGFDDHPVELWDCVHDPVMPQVLKEALENTDVTIVAHNSYFE---RTVLKACFNLDIP 89
+ + + L + S F+ V +++
Sbjct: 37 VGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKK----SMFDSKRAAVALKWKGIELC 92
Query: 90 IHRWICTLVLARSNGLPSALKAVGEALKLSSQKMEEGKELIARFCKGETHECLYDRNKPN 149
+ L+ A + V A KM++ + + R P+
Sbjct: 93 GVSFD-LLLAAYLLDPAQGVDDVAAA-----AKMKQYEAVRPDEAVYGKGA---KRAVPD 143
Query: 150 HREAWRLFGEYCKGDVTVTR----EIFKRLEPLS--SKEQELWYLDQTINDRGYCVDVAL 203
+ R E+ + + EQ L + + G VD
Sbjct: 144 EPVLAEHLVRKAAAIWELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKR 203
Query: 204 AHTLNQIVDVERTKLDQELESLTYGLVSSSRCLEKLKTWLFLETGLHLEDLTE---TTCQ 260
+ + + + ++Q + L + ++L LF + L + T+ +T
Sbjct: 204 LEQMGKELAEQLGTVEQRIYELAGQ-EFNINSPKQLGVILFEKLQLPVLKKTKTGYSTSA 262
Query: 261 RVLSSNKKLTPQAIQVFNNRMRASRSAVLKLNTLVEAMNSDGRLRGTLQFLGASRTGRWS 320
VL + + R + + L++ + D + T+ ++TGR S
Sbjct: 263 DVLEKLAPYHEIVENILHYRQ-LGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLS 321
Query: 321 GCVFPPQNLPRPSRSHEELDQIITHLPTSITSDPDPLQIISDCVRSCVIASE-GKKLVVA 379
QN+P + +R + SE + A
Sbjct: 322 STEPNLQNIPIRLEEGRK-------------------------IRQAFVPSESDWLIFAA 356
Query: 380 DLAGIEARVLAWMAGEQWKLKAFETGEDLYVTTYARSFNVAPAQVTKDQRAIGKVMELAL 439
D + IE RVLA +A + ++AF D++ T F V+ +VT + R K +
Sbjct: 357 DYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNF-- 414
Query: 440 GYQGGAKAFQKMASTTGLNLNTFAHLVKTNSAPEEWEDAENFCRWMQENHPEHAIEDLFI 499
G++ A
Sbjct: 415 ------------GIVYGISDYGLAQ------------------------------NLNIS 432
Query: 500 GTACERVKKAWRQKHSRVSELWNELHQAFEQTIENGKAIIARKRRDVPLVYMKKDKNNLI 559
+ + + V ++ + G
Sbjct: 433 RKEAAEFIERYFESFPGVKRYM---ENIVQEAKQKGYVTTLLH----------------- 472
Query: 560 LMLPSGRSLVYRDVGNNRSYLNTTTRQLTREYTYGGKLTENIVQAVSRDILAEGMMNA-- 617
R D+ + R +Q + DI+ + M++
Sbjct: 473 ------RRRYLPDITSRNF---NVRSFAERMAMNTP------IQGSAADIIKKAMIDLNA 517
Query: 618 ----TKAGYDIVLTVHDEIVCETPDTDEFNASMLY-HLMTSNPSWAKGLPLKAEGYESKR 672
+ ++L VHDE++ E P + L +M + +PLK + +
Sbjct: 518 RLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT--LRVPLKVDYHYGST 575
Query: 673 Y 673
+
Sbjct: 576 W 576