HHsearch results for GI: 254781194 and protein with PDBid: 1cw0_A
>1cw0_A Protein (DNA mismatch endonuclease); protein-DNA complex, intercalation, zinc, hydrolase/DNA; HET: DNA; 2.30A {Escherichia coli} SCOP: c.52.1.15
Probab=93.06 E-value=0.55 Score=26.36 Aligned_cols=74 Identities=15% Similarity=0.037 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEEECC---------CCCCCHHHHH----------
Q ss_conf 599999999999997898899971489887662799915991999997278---------9886989999----------
Q gi|254781194|r 7 SEAKLEKRLVKGSKKLDCLVFKTQFINQRGCPDRLIITPNGAHFWVEMKTS---------RGRLSNAQKR---------- 67 (98)
Q Consensus 7 ~E~~ie~~i~~~~k~~g~~~~k~~~~g~~G~PDli~~~~~g~~~fIEvK~~---------~gkls~~Q~~---------- 67 (98)
+++..|..+.++|.+.|..+. ...+.-+|-||+ ++ |+- =+.|||-.- ...|..+...
T Consensus 19 kdT~pE~~v~~~L~~~G~r~r-~~~~~~pg~pDi-v~-~~~-k~aIfvdGcfWH~~~c~~~~~p~~n~~~W~~K~~~n~~ 94 (155)
T 1cw0_A 19 RDTAIEKRLASLLTGQGLAFR-VQDASLPGRPDF-VV-DEY-RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVE 94 (155)
T ss_dssp SSCHHHHHHHHHHHHTTCCCE-ECCTTSTTCCSE-EE-GGG-TEEEEEECTTTTTCSSTTCCCCSSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEE-ECCCCCCCEEEE-EE-CCC-CEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999999997898899-546778983559-96-476-23675462177522434478998748899999877788
Q ss_pred ----HHHHHHHCCCEEEEECC
Q ss_conf ----99999978986999839
Q gi|254781194|r 68 ----VIATLLLYHQKVQVLSS 84 (98)
Q Consensus 68 ----~~~~l~~~G~~~~Vv~s 84 (98)
....|+++|+.+..++.
T Consensus 95 RD~~~~~~L~~~GW~vlriWE 115 (155)
T 1cw0_A 95 RDRRDISRLQELGWRVLIVWE 115 (155)
T ss_dssp HHHHHHHHHHHTTCEEEEEEH
T ss_pred HHHHHHHHHHHCCCEEEEEEC
T ss_conf 699999999979798999848