HHsearch results for GI: 254781194 and protein with PDBid: 1cw0_A

>1cw0_A Protein (DNA mismatch endonuclease); protein-DNA complex, intercalation, zinc, hydrolase/DNA; HET: DNA; 2.30A {Escherichia coli} SCOP: c.52.1.15
Probab=93.06  E-value=0.55  Score=26.36  Aligned_cols=74  Identities=15%  Similarity=0.037  Sum_probs=48.0

Q ss_pred             CHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEEECC---------CCCCCHHHHH----------
Q ss_conf             599999999999997898899971489887662799915991999997278---------9886989999----------
Q gi|254781194|r    7 SEAKLEKRLVKGSKKLDCLVFKTQFINQRGCPDRLIITPNGAHFWVEMKTS---------RGRLSNAQKR----------   67 (98)
Q Consensus         7 ~E~~ie~~i~~~~k~~g~~~~k~~~~g~~G~PDli~~~~~g~~~fIEvK~~---------~gkls~~Q~~----------   67 (98)
                      +++..|..+.++|.+.|..+. ...+.-+|-||+ ++ |+- =+.|||-.-         ...|..+...          
T Consensus        19 kdT~pE~~v~~~L~~~G~r~r-~~~~~~pg~pDi-v~-~~~-k~aIfvdGcfWH~~~c~~~~~p~~n~~~W~~K~~~n~~   94 (155)
T 1cw0_A           19 RDTAIEKRLASLLTGQGLAFR-VQDASLPGRPDF-VV-DEY-RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVE   94 (155)
T ss_dssp             SSCHHHHHHHHHHHHTTCCCE-ECCTTSTTCCSE-EE-GGG-TEEEEEECTTTTTCSSTTCCCCSSSHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEE-ECCCCCCCEEEE-EE-CCC-CEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             999999999999997898899-546778983559-96-476-23675462177522434478998748899999877788


Q ss_pred             ----HHHHHHHCCCEEEEECC
Q ss_conf             ----99999978986999839
Q gi|254781194|r   68 ----VIATLLLYHQKVQVLSS   84 (98)
Q Consensus        68 ----~~~~l~~~G~~~~Vv~s   84 (98)
                          ....|+++|+.+..++.
T Consensus        95 RD~~~~~~L~~~GW~vlriWE  115 (155)
T 1cw0_A           95 RDRRDISRLQELGWRVLIVWE  115 (155)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEH
T ss_pred             HHHHHHHHHHHCCCEEEEEEC
T ss_conf             699999999979798999848