HHsearch results for GI: 254781194 and protein with PDBid: 1gef_A
>1gef_A Holliday junction resolvase; HJC, hydrolase; 2.00A {Pyrococcus furiosus} SCOP: c.52.1.18 PDB: 1ipi_A
Probab=97.23 E-value=0.0026 Score=40.03 Aligned_cols=73 Identities=12% Similarity=0.081 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCC---CCHHHHHHHHH-HHHCCCEEEEE
Q ss_conf 599999999999997898899971489887662799915991999997278988---69899999999-99789869998
Q gi|254781194|r 7 SEAKLEKRLVKGSKKLDCLVFKTQFINQRGCPDRLIITPNGAHFWVEMKTSRGR---LSNAQKRVIAT-LLLYHQKVQVL 82 (98)
Q Consensus 7 ~E~~ie~~i~~~~k~~g~~~~k~~~~g~~G~PDli~~~~~g~~~fIEvK~~~gk---ls~~Q~~~~~~-l~~~G~~~~Vv 82 (98)
+=+..|+.++..+...|+.+... ++ +|-||++... ++.++.||+|+.+.. ++..|...+-. .+..|....++
T Consensus 4 KG~~~ERel~~~l~~~Gf~v~R~--~g-Sg~~Dlia~~-~~~~~~IEvKs~~~~~iyv~~eq~~~l~~~a~~fg~~p~ia 79 (123)
T 1gef_A 4 KGAQAERELIKLLEKHGFAVVRS--AG-SKKVDLVAGN-GKKYLCIEVKVTKKDHLYVGKRDMGRLIEFSRRFGGIPVLA 79 (123)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEB--GG-GSSCSEEEEC-SSCEEEEEEEEESSSCEEECHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEEC--CC-CCCCCEEECC-CCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCCEEEEE
T ss_conf 42089999999998589139986--79-9998877016-98089997576568548878999999999999649979999
Q ss_pred C
Q ss_conf 3
Q gi|254781194|r 83 S 83 (98)
Q Consensus 83 ~ 83 (98)
.
T Consensus 80 ~ 80 (123)
T 1gef_A 80 V 80 (123)
T ss_dssp E
T ss_pred E
T ss_conf 9