HHsearch results for GI: 254781194 and protein with PDBid: 1hh1_A
>1hh1_A Holliday junction resolving enzyme HJC; holliday junction resolvase, homologous recombination, nuclease domain, archaea; 2.15A {Sulfolobus solfataricus} SCOP: c.52.1.18
Probab=96.94 E-value=0.0038 Score=39.07 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=56.1
Q ss_pred HHCCHHHHHHHHHHHHHHCCCEEEEEECCCC---CCCCCEEEEECCCCEEEEEEECCCC-----CCCHHHHHHHHHHH-H
Q ss_conf 1205999999999999978988999714898---8766279991599199999727898-----86989999999999-7
Q gi|254781194|r 4 DYLSEAKLEKRLVKGSKKLDCLVFKTQFINQ---RGCPDRLIITPNGAHFWVEMKTSRG-----RLSNAQKRVIATLL-L 74 (98)
Q Consensus 4 ~~m~E~~ie~~i~~~~k~~g~~~~k~~~~g~---~G~PDli~~~~~g~~~fIEvK~~~g-----kls~~Q~~~~~~l~-~ 74 (98)
..=+=+..|+.+++.+...|+.+......|. .-.||++... ++..+.||+|.-.+ .++..|..-+..+. .
T Consensus 4 ~r~kG~~~ERelv~~l~~~Gf~v~R~p~SG~~~~~~~pDivA~~-~~~~~~IEvKs~k~~~~~lyv~~eqve~L~~f~~~ 82 (143)
T 1hh1_A 4 KKRKGSAVERNIVSRLRDKGFAVVRAPASGSKRKDPIPDIIALK-NGVIILIEMKSRKDIEGKIYVRREQAEGIIEFARK 82 (143)
T ss_dssp -----CHHHHHHHHHHHHTTCEEEECCC-------CCCSEEEEE-TTEEEEEEECCEECTTSCEEECHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEC-CCEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHH
T ss_conf 00114499999999998599408980345788878887389854-98699999998148861177679999999999997
Q ss_pred CCCEEEEEC
Q ss_conf 898699983
Q gi|254781194|r 75 YHQKVQVLS 83 (98)
Q Consensus 75 ~G~~~~Vv~ 83 (98)
.|+..+++.
T Consensus 83 fg~~~~iav 91 (143)
T 1hh1_A 83 SGGSLFLGV 91 (143)
T ss_dssp HTCEEEEEE
T ss_pred CCCEEEEEE
T ss_conf 499899999