HHsearch results for GI: 254781194 and protein with PDBid: 2wcw_A

>2wcw_A HJC; type II restriction endonuclease, hydrolase, DNA binding protein, holliday junction resolvase; 1.58A {Archaeoglobus fulgidus} PDB: 2wcz_A 2wiw_A 2wiz_A 2wj0_A
Probab=97.26  E-value=0.0037  Score=39.13  Aligned_cols=80  Identities=15%  Similarity=0.132  Sum_probs=55.9

Q ss_pred             HHCCHHHHHHHHHHHHHHCCCEEEEEECCCCC--CCCCEEEEECCCCEEEEEEECCCCC---CCHHHHHHHHHH-HHCCC
Q ss_conf             12059999999999999789889997148988--7662799915991999997278988---698999999999-97898
Q gi|254781194|r    4 DYLSEAKLEKRLVKGSKKLDCLVFKTQFINQR--GCPDRLIITPNGAHFWVEMKTSRGR---LSNAQKRVIATL-LLYHQ   77 (98)
Q Consensus         4 ~~m~E~~ie~~i~~~~k~~g~~~~k~~~~g~~--G~PDli~~~~~g~~~fIEvK~~~gk---ls~~Q~~~~~~l-~~~G~   77 (98)
                      +-.+=+..|+.|+..+...|+.+......|..  +.||++.. +++..+.||||.-+..   +++.|...+... +..|.
T Consensus         4 ~r~KG~~~ERel~~~l~~~G~~v~R~~~sg~~~~~~pDlia~-~~~~~~~IEvK~~~~~~iy~~~e~~eql~~~a~~~g~   82 (139)
T 2wcw_A            4 GKSKGTRFERDLLVELWKAGFAAIRVAGAGVSPFPCPDIVAG-NGRTYLAIEVKMRKELPLYLSADEVEQLVTFARGFGA   82 (139)
T ss_dssp             ---CHHHHHHHHHHHHHHTTCEEEEBTTSSSCSSCCCSEEEE-CSSCEEEEEEEECSSSCEEEEHHHHHHHHHHHHHHTC
T ss_pred             CHHHCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEE-CCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCC
T ss_conf             000034999999999986897699845566888899989953-7992899999872287053399999999999985799


Q ss_pred             EEEEECC
Q ss_conf             6999839
Q gi|254781194|r   78 KVQVLSS   84 (98)
Q Consensus        78 ~~~Vv~s   84 (98)
                      ..++++-
T Consensus        83 ~p~la~K   89 (139)
T 2wcw_A           83 EAYVALK   89 (139)
T ss_dssp             EEEEEEE
T ss_pred             CEEEEEE
T ss_conf             4799999