HHsearch results for GI: 254781194 and protein with PDBid: 2wcw_A
>2wcw_A HJC; type II restriction endonuclease, hydrolase, DNA binding protein, holliday junction resolvase; 1.58A {Archaeoglobus fulgidus} PDB: 2wcz_A 2wiw_A 2wiz_A 2wj0_A
Probab=97.26 E-value=0.0037 Score=39.13 Aligned_cols=80 Identities=15% Similarity=0.132 Sum_probs=55.9
Q ss_pred HHCCHHHHHHHHHHHHHHCCCEEEEEECCCCC--CCCCEEEEECCCCEEEEEEECCCCC---CCHHHHHHHHHH-HHCCC
Q ss_conf 12059999999999999789889997148988--7662799915991999997278988---698999999999-97898
Q gi|254781194|r 4 DYLSEAKLEKRLVKGSKKLDCLVFKTQFINQR--GCPDRLIITPNGAHFWVEMKTSRGR---LSNAQKRVIATL-LLYHQ 77 (98)
Q Consensus 4 ~~m~E~~ie~~i~~~~k~~g~~~~k~~~~g~~--G~PDli~~~~~g~~~fIEvK~~~gk---ls~~Q~~~~~~l-~~~G~ 77 (98)
+-.+=+..|+.|+..+...|+.+......|.. +.||++.. +++..+.||||.-+.. +++.|...+... +..|.
T Consensus 4 ~r~KG~~~ERel~~~l~~~G~~v~R~~~sg~~~~~~pDlia~-~~~~~~~IEvK~~~~~~iy~~~e~~eql~~~a~~~g~ 82 (139)
T 2wcw_A 4 GKSKGTRFERDLLVELWKAGFAAIRVAGAGVSPFPCPDIVAG-NGRTYLAIEVKMRKELPLYLSADEVEQLVTFARGFGA 82 (139)
T ss_dssp ---CHHHHHHHHHHHHHHTTCEEEEBTTSSSCSSCCCSEEEE-CSSCEEEEEEEECSSSCEEEEHHHHHHHHHHHHHHTC
T ss_pred CHHHCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEE-CCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCC
T ss_conf 000034999999999986897699845566888899989953-7992899999872287053399999999999985799
Q ss_pred EEEEECC
Q ss_conf 6999839
Q gi|254781194|r 78 KVQVLSS 84 (98)
Q Consensus 78 ~~~Vv~s 84 (98)
..++++-
T Consensus 83 ~p~la~K 89 (139)
T 2wcw_A 83 EAYVALK 89 (139)
T ss_dssp EEEEEEE
T ss_pred CEEEEEE
T ss_conf 4799999