HHsearch alignment for GI: 254781197 and conserved domain: COG0466

>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=96.67  E-value=0.0026  Score=39.97  Aligned_cols=84  Identities=23%  Similarity=0.404  Sum_probs=45.0

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCC--EEEEEEECCCCCC-CCCCCCCCCCCCCH---HHHHHHCCCCE----EE--E
Q ss_conf             718999889999989999999851898--1799861188899-98323553000123---54211102763----64--4
Q gi|254781197|r    2 AHIFVLIGASGVGETTIAKQVVLNSEY--LVMPVGVTTRRPR-VDEKQYIDYRFISQ---SQFKGWKHTGL----FI--E   69 (185)
Q Consensus         2 ~kiivi~GpSGsGK~tl~~~L~~~~~~--~~~~is~TTR~~R-~~E~~g~dY~Fvs~---e~F~~~i~~g~----fl--E   69 (185)
T Consensus       350 GpILcLVGPPGVGKTSLgkSIA~al~RkfvR~sLG----GvrDEAEIRGHRRTYIGaMPGrIiQ~mkka~~~NPv~LLDE  425 (782)
T COG0466         350 GPILCLVGPPGVGKTSLGKSIAKALGRKFVRISLG----GVRDEAEIRGHRRTYIGAMPGKIIQGMKKAGVKNPVFLLDE  425 (782)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECC----CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf             85799978998870118999999958977999547----65427775355312335687289999998677687478640


Q ss_pred             EEEECCCEEEEECCCHHHHH
Q ss_conf             55504860554432002333
Q gi|254781197|r   70 TTKVRDEYYGYLKEDINNPM   89 (185)
Q Consensus        70 ~~~~~g~~YGt~~~~i~~~~   89 (185)
T Consensus       426 IDKm~ss~rGDPaSALLEVL  445 (782)
T COG0466         426 IDKMGSSFRGDPASALLEVL  445 (782)
T ss_pred             HHHCCCCCCCCHHHHHHHHC
T ss_conf             33316777788688888626