HHsearch alignment for GI: 254781197 and conserved domain: COG0466
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=96.67 E-value=0.0026 Score=39.97 Aligned_cols=84 Identities=23% Similarity=0.404 Sum_probs=45.0
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC--EEEEEEECCCCCC-CCCCCCCCCCCCCH---HHHHHHCCCCE----EE--E
Q ss_conf 718999889999989999999851898--1799861188899-98323553000123---54211102763----64--4
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEY--LVMPVGVTTRRPR-VDEKQYIDYRFISQ---SQFKGWKHTGL----FI--E 69 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~--~~~~is~TTR~~R-~~E~~g~dY~Fvs~---e~F~~~i~~g~----fl--E 69 (185)
T Consensus 350 GpILcLVGPPGVGKTSLgkSIA~al~RkfvR~sLG----GvrDEAEIRGHRRTYIGaMPGrIiQ~mkka~~~NPv~LLDE 425 (782)
T COG0466 350 GPILCLVGPPGVGKTSLGKSIAKALGRKFVRISLG----GVRDEAEIRGHRRTYIGAMPGKIIQGMKKAGVKNPVFLLDE 425 (782)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECC----CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf 85799978998870118999999958977999547----65427775355312335687289999998677687478640
Q ss_pred EEEECCCEEEEECCCHHHHH
Q ss_conf 55504860554432002333
Q gi|254781197|r 70 TTKVRDEYYGYLKEDINNPM 89 (185)
Q Consensus 70 ~~~~~g~~YGt~~~~i~~~~ 89 (185)
T Consensus 426 IDKm~ss~rGDPaSALLEVL 445 (782)
T COG0466 426 IDKMGSSFRGDPASALLEVL 445 (782)
T ss_pred HHHCCCCCCCCHHHHHHHHC
T ss_conf 33316777788688888626