HHsearch alignment for GI: 254781197 and conserved domain: COG1936
>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism].
Probab=98.41 E-value=6.5e-06 Score=55.14 Aligned_cols=140 Identities=14% Similarity=0.155 Sum_probs=73.2
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEEC
Q ss_conf 18999889999989999999851898179986118889998323553000123542111027636445550486055443
Q gi|254781197|r 3 HIFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYGYLK 82 (185)
Q Consensus 3 kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~flE~~~~~g~~YGt~~ 82 (185)
T Consensus 1 m~I~ITGTPGvGKTT~~~~L~-~lg-~~~-i~--------------------l~el~~--e~~~~~~~de~r-~s~~vD~ 54 (180)
T COG1936 1 MLIAITGTPGVGKTTVCKLLR-ELG-YKV-IE--------------------LNELAK--ENGLYTEYDELR-KSVIVDV 54 (180)
T ss_pred CEEEEECCCCCCHHHHHHHHH-HHC-CCE-EE--------------------HHHHHH--HCCCEECCCCCC-CEEEEEH
T ss_conf 937993799986687999999-829-846-61--------------------999998--669711437766-1588667
Q ss_pred CCHHHHHH---HCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH---------HHH
Q ss_conf 20023332---012320024310001332105531011222133289999988630342078999999---------987
Q gi|254781197|r 83 EDINNPME---HGYDILLILTHQGLAPLKKLYEDQVTSIFIAPPSEAELIQRRIKRREDTPFNLDPDL---------FGK 150 (185)
Q Consensus 83 ~~i~~~~~---~g~~~il~id~~G~~~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~~d~~~~i~~rl---------~~~ 150 (185)
T Consensus 55 d~~~~~le~~~~~~~~Ivd~H~~h------l~~~-~dlVvVLR~~p~~L~~RLk~RG-y~~eKI~ENveAEi~~vi~~EA 126 (180)
T COG1936 55 DKLRKRLEELLREGSGIVDSHLSH------LLPD-CDLVVVLRADPEVLYERLKGRG-YSEEKILENVEAEILDVILIEA 126 (180)
T ss_pred HHHHHHHHHHHCCCCEEEECHHHH------CCCC-CCEEEEECCCHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999988888750588476126662------1787-8889997189899999998769-9878988779999999999999
Q ss_pred HHCCCEEEE----CCCHHHHHHHHHHHHHH
Q ss_conf 636988999----39789999999999999
Q gi|254781197|r 151 NHSYSFTIV----NNHLPTACRQVGFIREF 176 (185)
Q Consensus 151 ~~~fD~~Iv----Nddle~a~~~l~~I~e~ 176 (185)
T Consensus 127 ~E~~~~v~evdtt~~s~ee~~~~i~~ii~~ 156 (180)
T COG1936 127 VERFEAVIEVDTTNRSPEEVAEEIIDIIGG 156 (180)
T ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 973476499978999999999999999703