HHsearch alignment for GI: 254781197 and conserved domain: COG4088
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism].
Probab=97.48 E-value=0.00018 Score=46.73 Aligned_cols=126 Identities=18% Similarity=0.264 Sum_probs=63.2
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCC-CEEEEEEECC---CCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCEE
Q ss_conf 1899988999998999999985189-8179986118---88999832355300012354211102763644555048605
Q gi|254781197|r 3 HIFVLIGASGVGETTIAKQVVLNSE-YLVMPVGVTT---RRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYY 78 (185)
Q Consensus 3 kiivi~GpSGsGK~tl~~~L~~~~~-~~~~~is~TT---R~~R~~E~~g~dY~Fvs~e~F~~~i~~g~flE~~~~~g~~Y 78 (185)
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kdy~~~i~~DEslpi~-ke~yres~~ks~---------------- 64 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKDYLRGILWDESLPIL-KEVYRESFLKSV---------------- 64 (261)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCHH-HHHHHHHHHHHH----------------
T ss_conf 569982699988017899999999972001121320145412331324037-999999998889----------------
Q ss_pred EEECCCHHHHHHHCCCCCCCCCCC---CHH-HH----HHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 544320023332012320024310---001-33----2105531011222133289999988630342078999999987
Q gi|254781197|r 79 GYLKEDINNPMEHGYDILLILTHQ---GLA-PL----KKLYEDQVTSIFIAPPSEAELIQRRIKRREDTPFNLDPDLFGK 150 (185)
Q Consensus 79 Gt~~~~i~~~~~~g~~~il~id~~---G~~-~l----k~~~~~~~~~IfI~pps~~~L~~RL~~R~~d~~~~i~~rl~~~ 150 (185)
T Consensus 65 ---~rlldSalk-n~~VIvD-dtNYyksmRrqL~ceak~~-~tt~ciIyl~~p-lDtc~rrN~ergepip~Evl~qly~R 137 (261)
T COG4088 65 ---ERLLDSALK-NYLVIVD-DTNYYKSMRRQLACEAKER-KTTWCIIYLRTP-LDTCLRRNRERGEPIPEEVLRQLYDR 137 (261)
T ss_pred ---HHHHHHHHC-CEEEEEE-CCCHHHHHHHHHHHHHHHC-CCCEEEEEECCC-HHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf ---999999863-6499970-6328889999999999863-786599997268-89998860247999989999999996
Q ss_pred HH
Q ss_conf 63
Q gi|254781197|r 151 NH 152 (185)
Q Consensus 151 ~~ 152 (185)
T Consensus 138 fE 139 (261)
T COG4088 138 FE 139 (261)
T ss_pred HC
T ss_conf 14