HHsearch alignment for GI: 254781197 and conserved domain: COG4988
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].
Probab=97.44 E-value=0.00022 Score=46.21 Aligned_cols=51 Identities=24% Similarity=0.270 Sum_probs=33.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf 7189998899999899999998518981799861188899983235530001235421110
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWK 62 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i 62 (185)
T Consensus 347 g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I-------~---vng~~l~~l~~~~~~k~i 397 (559)
T COG4988 347 GQLTALVGASGAGKSTLLNLLLGFLAPTQGEI-------R---VNGIDLRDLSPEAWRKQI 397 (559)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE-------E---ECCCCCCCCCHHHHHHHE
T ss_conf 96799988999978999999847577778448-------8---899310006877888672