HHsearch alignment for GI: 254781197 and conserved domain: PRK03839

Probab=98.38  E-value=4.6e-06  Score=56.02  Aligned_cols=135  Identities=16%  Similarity=0.153  Sum_probs=65.9

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEE-EEEEECCCEEEEEC
Q ss_conf             89998899999899999998518981799861188899983235530001235421110276364-45550486055443
Q gi|254781197|r    4 IFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFI-ETTKVRDEYYGYLK   82 (185)
Q Consensus         4 iivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~fl-E~~~~~g~~YGt~~   82 (185)
T Consensus         2 ~I~ITGTPGtGKTTva~~La~~lg-~~~-i~v~--------------------~l---a~~~~~~~~~d----~~~~iD~   52 (180)
T PRK03839          2 IIAITGTPGVGKTTISKLLAEKLG-YEY-VNLR--------------------DF---ALEKGIGEEKD----DELEIDV   52 (180)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHC-CEE-EEHH--------------------HH---HHHCCCCCCCC----CCCCCCH
T ss_conf             899978999998999999999769-879-8799--------------------99---99839986767----7504659


Q ss_pred             CCHHHHHH---HCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH----HHHH-----HH
Q ss_conf             20023332---012320024310001332105531011222133289999988630342078999----9999-----87
Q gi|254781197|r   83 EDINNPME---HGYDILLILTHQGLAPLKKLYEDQVTSIFIAPPSEAELIQRRIKRREDTPFNLD----PDLF-----GK  150 (185)
Q Consensus        83 ~~i~~~~~---~g~~~il~id~~G~~~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~~d~~~~i~----~rl~-----~~  150 (185)
T Consensus        53 d~l~~~~~~~~~~~~~ivd~H--~----~h~~p~D~-VIVLR-~~P~iL~~RL~~RgY-s~~KI~ENveaEil~vil~Ea  123 (180)
T PRK03839         53 DELAYFVEEEFKGKNVVLDGH--L----SHLMPADL-VIVLR-AHPKLIAERLKERGY-SKKKIGENVEAELVDVILIEA  123 (180)
T ss_pred             HHHHHHHHHHHCCCCEEEEEE--C----CCCCCCCE-EEEEE-CCHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999998734898899864--3----14636877-99997-886999999997699-989999999999999999999


Q ss_pred             HHCCCEE--EE--CCCHHHHHHHHHHHHHH
Q ss_conf             6369889--99--39789999999999999
Q gi|254781197|r  151 NHSYSFT--IV--NNHLPTACRQVGFIREF  176 (185)
Q Consensus       151 ~~~fD~~--Iv--Nddle~a~~~l~~I~e~  176 (185)
T Consensus       124 ~e~~~~~~eidtt~~~pe~v~~~I~~~i~~  153 (180)
T PRK03839        124 LEEHENVIEVDTTNKTPEEVVEEILNLIKS  153 (180)
T ss_pred             HHHCCCEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf             984398899989999999999999999957