HHsearch alignment for GI: 254781197 and conserved domain: PRK04195

Probab=97.71  E-value=0.00059  Score=43.73  Aligned_cols=120  Identities=16%  Similarity=0.187  Sum_probs=57.1

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCC--EEEEEEECCCCCCCCCCCCCCCCCCCHH-HHHHHC-CCCEEEEEEEECCCE-
Q ss_conf             18999889999989999999851898--1799861188899983235530001235-421110-276364455504860-
Q gi|254781197|r    3 HIFVLIGASGVGETTIAKQVVLNSEY--LVMPVGVTTRRPRVDEKQYIDYRFISQS-QFKGWK-HTGLFIETTKVRDEY-   77 (185)
Q Consensus         3 kiivi~GpSGsGK~tl~~~L~~~~~~--~~~~is~TTR~~R~~E~~g~dY~Fvs~e-~F~~~i-~~g~flE~~~~~g~~-   77 (185)
T Consensus        41 k~lLL~GPpGvGKTT~a~~lAk~~g~~viElNASD-~R~~-----~~I~-~~i~~~~~~~sl~~~~~KlIIlDEvD~l~~  113 (403)
T PRK04195         41 KALLLYGPPGVGKTSLAHALANDYGWEVIELNASD-QRTK-----DVIE-RVAGEASTSGSLFGAKRKLILLDEVDGIHG  113 (403)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCC-CCCH-----HHHH-HHHHHHHHCCCCCCCCCEEEEEECCCCCCC
T ss_conf             46998893998799999999998499859977101-1478-----9999-999987606887788734999634344572


Q ss_pred             ---EEEECCCHHHHHHHCCCCC-CCC-CCCCH--HHHHHCCCCCHHHHHHCCCCHHHHHHHHHH
Q ss_conf             ---5544320023332012320-024-31000--133210553101122213328999998863
Q gi|254781197|r   78 ---YGYLKEDINNPMEHGYDIL-LIL-THQGL--APLKKLYEDQVTSIFIAPPSEAELIQRRIK  134 (185)
Q Consensus        78 ---YGt~~~~i~~~~~~g~~~i-l~i-d~~G~--~~lk~~~~~~~~~IfI~pps~~~L~~RL~~  134 (185)
T Consensus       114 ~~d~g-g~~al~~~ik~s~~PiIli~Nd~~~~~~~~lrs----~c~~i~F~~~~~~~I~~~L~~  172 (403)
T PRK04195        114 NADRG-GVRAILEIIKKAKNPIILTANDPYDPSLRPLRN----ACLMIEFKRLSKRSIVPVLKR  172 (403)
T ss_pred             HHHHH-HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH----HHHHCCCCCCCHHHHHHHHHH
T ss_conf             44479-999999998548870899826845567177997----661221799499999999999