HHsearch alignment for GI: 254781197 and conserved domain: PRK08118

>PRK08118 topology modulation protein; Reviewed.
Probab=97.71  E-value=3e-05  Score=51.27  Aligned_cols=64  Identities=17%  Similarity=0.301  Sum_probs=36.6

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEE----EEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEE--EEEEEC
Q ss_conf             97189998899999899999998518981799----861188899983235530001235421110276364--455504
Q gi|254781197|r    1 MAHIFVLIGASGVGETTIAKQVVLNSEYLVMP----VGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFI--ETTKVR   74 (185)
Q Consensus         1 m~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~----is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~fl--E~~~~~   74 (185)
T Consensus         1 M~r-I~IiG~~GsGKSTlAr~L~~~~-~ip~~~LD~l~w~-----~~---w~---~~~~~e~~~~~~--~~~~~~~WIid   65 (167)
T PRK08118          1 MKK-IILIGSGGSGKSTLARQLGEKL-NIPVHHLDALFWK-----PN---WE---GVPKEEQRTVQN--ELVKEDEWIID   65 (167)
T ss_pred             CCE-EEEECCCCCCHHHHHHHHHHHH-CCCEEECCCEEEC-----CC---CC---CCCHHHHHHHHH--HHHHCCCEEEE
T ss_conf             967-9998899987999999999988-9697964434766-----89---94---688899999999--99838987994


Q ss_pred             CCEEE
Q ss_conf             86055
Q gi|254781197|r   75 DEYYG   79 (185)
Q Consensus        75 g~~YG   79 (185)
T Consensus        66 Gny~~   70 (167)
T PRK08118         66 GNYGG   70 (167)
T ss_pred             CCCHH
T ss_conf             77177