HHsearch alignment for GI: 254781197 and conserved domain: PRK08233
>PRK08233 hypothetical protein; Provisional.
Probab=98.79 E-value=5.5e-08 Score=67.25 Aligned_cols=153 Identities=16% Similarity=0.246 Sum_probs=76.7
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC-CCHHHHHHHCCCC-EEEEEEEECCCEEE
Q ss_conf 718999889999989999999851898179986118889998323553000-1235421110276-36445550486055
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRF-ISQSQFKGWKHTG-LFIETTKVRDEYYG 79 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~F-vs~e~F~~~i~~g-~flE~~~~~g~~YG 79 (185)
T Consensus 3 p~IIgIaGgSgSGKTtla~~l~~~l~~~~~-~~~-----------D-~y~~~~~~~~~~~~~~~~~~~-------d~~d~ 62 (182)
T PRK08233 3 TKIITIAAVSGGGKTTLTERLTHKLKNSKA-LYF-----------D-RYDFDNCPEDICKWIDDGANY-------SEWVL 62 (182)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEE-EEE-----------C-CCCCCCCHHHHHHHHCCCCCC-------CHHHH
T ss_conf 889999688867899999999997467758-996-----------6-655546878899874067786-------66669
Q ss_pred E-ECCCHHHHHHHCCCC-CCCCCCCCHH-----HHHHCCCCCHHHHHHCCCCHHHHHHHHHH----C-CCCCHHHHHHHH
Q ss_conf 4-432002333201232-0024310001-----33210553101122213328999998863----0-342078999999
Q gi|254781197|r 80 Y-LKEDINNPMEHGYDI-LLILTHQGLA-----PLKKLYEDQVTSIFIAPPSEAELIQRRIK----R-REDTPFNLDPDL 147 (185)
Q Consensus 80 t-~~~~i~~~~~~g~~~-il~id~~G~~-----~lk~~~~~~~~~IfI~pps~~~L~~RL~~----R-~~d~~~~i~~rl 147 (185)
T Consensus 63 ~~l~~~l~~-l~~~~~~d~iI--vEgil~l~~~~lr~l~D---~kIfVdtp~Dirl~RRi~RDi~Er~gr~i~svl~qY~ 136 (182)
T PRK08233 63 TPLIKDIQE-LIAKSNVDYII--VDYPFAYLNSEMRQYID---VTIFIDTPLDIAMARRILRDFKEDTGNEIHNDLKHYL 136 (182)
T ss_pred HHHHHHHHH-HHCCCCCCEEE--EEEEHHHCCHHHHHHHC---EEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 999999999-85599872899--96443626898997718---7899728689999998888877761887899999999
Q ss_pred HH---HH--------HCCCEEEECC-CHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98---76--------3698899939-7899999999999999852364
Q gi|254781197|r 148 FG---KN--------HSYSFTIVNN-HLPTACRQVGFIREFVKQHRII 183 (185)
Q Consensus 148 ~~---~~--------~~fD~~IvNd-dle~a~~~l~~I~e~~~~~~~~ 183 (185)
T Consensus 137 ~~VrPm~~~fvePsk~~ADiIId~~~aid~i~~---~i~~~l~~~~~~ 181 (182)
T PRK08233 137 NYARPLYLEALDTVKPNADIVLDGALSVEEIIN---QIEEELYRREVI 181 (182)
T ss_pred HHHHHHHHHHHCHHHHCCCEEEECCCCHHHHHH---HHHHHHHHCCCC
T ss_conf 987889999857003219689858607999999---999999745246