HHsearch alignment for GI: 254781197 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=96.40 E-value=0.002 Score=40.59 Aligned_cols=23 Identities=39% Similarity=0.583 Sum_probs=18.3
Q ss_pred CEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 18999889999989999999851
Q gi|254781197|r 3 HIFVLIGASGVGETTIAKQVVLN 25 (185)
Q Consensus 3 kiivi~GpSGsGK~tl~~~L~~~ 25 (185)
T Consensus 102 ~Nvil~G~~GtGKThLA~Alg~~ 124 (258)
T PRK09183 102 ENIVLLGPSGVGKTHLAIALGYE 124 (258)
T ss_pred CCEEEECCCCCCHHHHHHHHHHH
T ss_conf 86799899998689999999999