HHsearch alignment for GI: 254781197 and conserved domain: PRK09473
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional.
Probab=96.89 E-value=0.0009 Score=42.66 Aligned_cols=50 Identities=10% Similarity=0.065 Sum_probs=31.6
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC---EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 718999889999989999999851898---179986118889998323553000123542111
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEY---LVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGW 61 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~---~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~ 61 (185)
T Consensus 42 GEilgivGeSGsGKSTl~~~i~gll~~~~~~sG~I~----------~~G~~i~~~~~~~~~~~ 94 (330)
T PRK09473 42 GETLGIVGESGSGKSQTAFALMGLLAANGRIGGSAT----------FNGREILNLPEKELNKL 94 (330)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEE----------ECCEECCCCCHHHHHHH
T ss_conf 989999868987799999999768888883358999----------99998665899999986