HHsearch alignment for GI: 254781197 and conserved domain: PRK12338
>PRK12338 hypothetical protein; Provisional.
Probab=97.75 E-value=7e-05 Score=49.10 Aligned_cols=166 Identities=20% Similarity=0.252 Sum_probs=74.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHH-----------HHHCCCCEEEEEE-
Q ss_conf 8999889999989999999851898179986118889998323553000123542-----------1110276364455-
Q gi|254781197|r 4 IFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQF-----------KGWKHTGLFIETT- 71 (185)
Q Consensus 4 iivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F-----------~~~i~~g~flE~~- 71 (185)
T Consensus 6 iILiGGtSGvGKSTlAseLAsRL-gI~tvIsTD--sIRe-----vmR~~is~e~~P~L~~STY~A~~~Lr~~~~~~~~~~ 77 (320)
T PRK12338 6 VILIGSASGIGKSTIASEVARRL-NIKHLIETD--FIRE-----VVRGIIGKEYAPALHMSSYNAYTALRDKDHFVPKRF 77 (320)
T ss_pred EEEEECCCCCCHHHHHHHHHHHC-CCCEEECCH--HHHH-----HHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 99970688876888999999851-987110334--7999-----999833804153455420267887267423577411
Q ss_pred ---EECCC-----EEEEECC-CHHHHHHHCCCCCCC---CCCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf ---50486-----0554432-002333201232002---43100013321055310112221332899999886303420
Q gi|254781197|r 72 ---KVRDE-----YYGYLKE-DINNPMEHGYDILLI---LTHQGLAPLKKLYEDQVTSIFIAPPSEAELIQRRIKRREDT 139 (185)
Q Consensus 72 ---~~~g~-----~YGt~~~-~i~~~~~~g~~~il~---id~~G~~~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~~d~ 139 (185)
T Consensus 78 ~~~vi~Gfe~q~e~V~~~le~vI~r~~~~~~sivIEGVHLvP-gfi~~~~~~~~~~i~F~i~~~~E~kH~eRF~~Rak~m 156 (320)
T PRK12338 78 EELVIAGFEEHASFVIPAIEKVIKRAVTDADDIVIEGVHLVP-GLINIEQFYEYANIHFFILYADEEEHKERFVKRAMEI 156 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECH-HHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 678999999998999999999999998648867998453055-5505766226666369999817689999999999885
Q ss_pred HH------------HHHHHHHHHHHCCCE-EEECCCHHHHHHHH-HHHHHHHH
Q ss_conf 78------------999999987636988-99939789999999-99999998
Q gi|254781197|r 140 PF------------NLDPDLFGKNHSYSF-TIVNNHLPTACRQV-GFIREFVK 178 (185)
Q Consensus 140 ~~------------~i~~rl~~~~~~fD~-~IvNddle~a~~~l-~~I~e~~~ 178 (185)
T Consensus 157 ~r~~Kyvkyf~niR~Iqd~L~~~Adeh~iP~I~N~nid~sV~~i~~~I~~~~~ 209 (320)
T PRK12338 157 KRGGKHLEYFRENRIIHDFLVSQADEHGIPVIKNDDIDRTVSKVLSVIREVSV 209 (320)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHE
T ss_conf 02650899999889999999841676199730476355689999999998734