HHsearch alignment for GI: 254781197 and conserved domain: PRK12338

>PRK12338 hypothetical protein; Provisional.
Probab=97.75  E-value=7e-05  Score=49.10  Aligned_cols=166  Identities=20%  Similarity=0.252  Sum_probs=74.0

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHH-----------HHHCCCCEEEEEE-
Q ss_conf             8999889999989999999851898179986118889998323553000123542-----------1110276364455-
Q gi|254781197|r    4 IFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQF-----------KGWKHTGLFIETT-   71 (185)
Q Consensus         4 iivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F-----------~~~i~~g~flE~~-   71 (185)
T Consensus         6 iILiGGtSGvGKSTlAseLAsRL-gI~tvIsTD--sIRe-----vmR~~is~e~~P~L~~STY~A~~~Lr~~~~~~~~~~   77 (320)
T PRK12338          6 VILIGSASGIGKSTIASEVARRL-NIKHLIETD--FIRE-----VVRGIIGKEYAPALHMSSYNAYTALRDKDHFVPKRF   77 (320)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHC-CCCEEECCH--HHHH-----HHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf             99970688876888999999851-987110334--7999-----999833804153455420267887267423577411


Q ss_pred             ---EECCC-----EEEEECC-CHHHHHHHCCCCCCC---CCCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf             ---50486-----0554432-002333201232002---43100013321055310112221332899999886303420
Q gi|254781197|r   72 ---KVRDE-----YYGYLKE-DINNPMEHGYDILLI---LTHQGLAPLKKLYEDQVTSIFIAPPSEAELIQRRIKRREDT  139 (185)
Q Consensus        72 ---~~~g~-----~YGt~~~-~i~~~~~~g~~~il~---id~~G~~~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~~d~  139 (185)
T Consensus        78 ~~~vi~Gfe~q~e~V~~~le~vI~r~~~~~~sivIEGVHLvP-gfi~~~~~~~~~~i~F~i~~~~E~kH~eRF~~Rak~m  156 (320)
T PRK12338         78 EELVIAGFEEHASFVIPAIEKVIKRAVTDADDIVIEGVHLVP-GLINIEQFYEYANIHFFILYADEEEHKERFVKRAMEI  156 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECH-HHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf             678999999998999999999999998648867998453055-5505766226666369999817689999999999885


Q ss_pred             HH------------HHHHHHHHHHHCCCE-EEECCCHHHHHHHH-HHHHHHHH
Q ss_conf             78------------999999987636988-99939789999999-99999998
Q gi|254781197|r  140 PF------------NLDPDLFGKNHSYSF-TIVNNHLPTACRQV-GFIREFVK  178 (185)
Q Consensus       140 ~~------------~i~~rl~~~~~~fD~-~IvNddle~a~~~l-~~I~e~~~  178 (185)
T Consensus       157 ~r~~Kyvkyf~niR~Iqd~L~~~Adeh~iP~I~N~nid~sV~~i~~~I~~~~~  209 (320)
T PRK12338        157 KRGGKHLEYFRENRIIHDFLVSQADEHGIPVIKNDDIDRTVSKVLSVIREVSV  209 (320)
T ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHE
T ss_conf             02650899999889999999841676199730476355689999999998734