HHsearch alignment for GI: 254781197 and conserved domain: PRK13973

>PRK13973 thymidylate kinase; Provisional.
Probab=97.54  E-value=7.8e-05  Score=48.83  Aligned_cols=164  Identities=13%  Similarity=0.137  Sum_probs=76.0

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEE------EEEEEEC-
Q ss_conf             718999889999989999999851898179986118889998323553000123542111027636------4455504-
Q gi|254781197|r    2 AHIFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLF------IETTKVR-   74 (185)
Q Consensus         2 ~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~f------lE~~~~~-   74 (185)
T Consensus         3 G~fIv~EGiDGsGKsTq~~~L~~~L~~~g~~-v~~trePg~t~~-~--------e~ir~~ll~~~~~~~~~~~e~lLfaA   72 (216)
T PRK13973          3 GRFITFEGGEGAGKSTQIRLLAERLRAAGYD-VLVTREPGGSPG-A--------EAIRHVLLSGAAELYGPAMEALLFAA   72 (216)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCC-EEEEECCCCCCC-H--------HHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf             2499988999998999999999999977995-799409899840-8--------99999984666578998999999999


Q ss_pred             CCEEEEECCCHHHHHHHCCCCCCCCCC------CCHH---------HHHH-----CCCCCHHHHHHCCCCHHHHHHHHHH
Q ss_conf             860554432002333201232002431------0001---------3321-----0553101122213328999998863
Q gi|254781197|r   75 DEYYGYLKEDINNPMEHGYDILLILTH------QGLA---------PLKK-----LYEDQVTSIFIAPPSEAELIQRRIK  134 (185)
Q Consensus        75 g~~YGt~~~~i~~~~~~g~~~il~id~------~G~~---------~lk~-----~~~~~~~~IfI~pps~~~L~~RL~~  134 (185)
T Consensus        73 ~R~eh-~~~~I~paL~~g~~VI~DRy~~Ss~AYQg~~~~~~~~~l~~l~~~~~~~~~PD--lti~LDv~-~e~a~~R~~~  148 (216)
T PRK13973         73 ARDDH-VEEVIRPALARGKIVLCDRFIDSTRAYQGVTGNVDPALLAALERVAINGVMPD--LTLILDIP-AEVGLERAAK  148 (216)
T ss_pred             HHHHH-HHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC--EEEEECCC-HHHHHHHHHH
T ss_conf             99999-99999999977998986786257999977427889899999999996799999--89998188-8999999998


Q ss_pred             CCCCCH-H-------HHHHHHHH-----HHHC-CCEEEEC--CCHHHHHHHHHHHH-HHHHH
Q ss_conf             034207-8-------99999998-----7636-9889993--97899999999999-99985
Q gi|254781197|r  135 RREDTP-F-------NLDPDLFG-----KNHS-YSFTIVN--NHLPTACRQVGFIR-EFVKQ  179 (185)
Q Consensus       135 R~~d~~-~-------~i~~rl~~-----~~~~-fD~~IvN--ddle~a~~~l~~I~-e~~~~  179 (185)
T Consensus       149 R~~~~~~dr~E~~~~~f~~kVr~~Y~~la~~~~~r~~vIDa~~s~eeV~~~I~~~v~~~L~e  210 (216)
T PRK13973        149 RRGSETPDRFEKEDLAFHEKRREAFLQIAAQEPERCVVIDADASPEAVAAEIWAAVDQRLLE  210 (216)
T ss_pred             HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
T ss_conf             35776300255647999999999999999859887899719999999999999999998621