HHsearch alignment for GI: 254781197 and conserved domain: PRK13973
>PRK13973 thymidylate kinase; Provisional.
Probab=97.54 E-value=7.8e-05 Score=48.83 Aligned_cols=164 Identities=13% Similarity=0.137 Sum_probs=76.0
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEE------EEEEEEC-
Q ss_conf 718999889999989999999851898179986118889998323553000123542111027636------4455504-
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLF------IETTKVR- 74 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~f------lE~~~~~- 74 (185)
T Consensus 3 G~fIv~EGiDGsGKsTq~~~L~~~L~~~g~~-v~~trePg~t~~-~--------e~ir~~ll~~~~~~~~~~~e~lLfaA 72 (216)
T PRK13973 3 GRFITFEGGEGAGKSTQIRLLAERLRAAGYD-VLVTREPGGSPG-A--------EAIRHVLLSGAAELYGPAMEALLFAA 72 (216)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCC-EEEEECCCCCCC-H--------HHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 2499988999998999999999999977995-799409899840-8--------99999984666578998999999999
Q ss_pred CCEEEEECCCHHHHHHHCCCCCCCCCC------CCHH---------HHHH-----CCCCCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 860554432002333201232002431------0001---------3321-----0553101122213328999998863
Q gi|254781197|r 75 DEYYGYLKEDINNPMEHGYDILLILTH------QGLA---------PLKK-----LYEDQVTSIFIAPPSEAELIQRRIK 134 (185)
Q Consensus 75 g~~YGt~~~~i~~~~~~g~~~il~id~------~G~~---------~lk~-----~~~~~~~~IfI~pps~~~L~~RL~~ 134 (185)
T Consensus 73 ~R~eh-~~~~I~paL~~g~~VI~DRy~~Ss~AYQg~~~~~~~~~l~~l~~~~~~~~~PD--lti~LDv~-~e~a~~R~~~ 148 (216)
T PRK13973 73 ARDDH-VEEVIRPALARGKIVLCDRFIDSTRAYQGVTGNVDPALLAALERVAINGVMPD--LTLILDIP-AEVGLERAAK 148 (216)
T ss_pred HHHHH-HHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC--EEEEECCC-HHHHHHHHHH
T ss_conf 99999-99999999977998986786257999977427889899999999996799999--89998188-8999999998
Q ss_pred CCCCCH-H-------HHHHHHHH-----HHHC-CCEEEEC--CCHHHHHHHHHHHH-HHHHH
Q ss_conf 034207-8-------99999998-----7636-9889993--97899999999999-99985
Q gi|254781197|r 135 RREDTP-F-------NLDPDLFG-----KNHS-YSFTIVN--NHLPTACRQVGFIR-EFVKQ 179 (185)
Q Consensus 135 R~~d~~-~-------~i~~rl~~-----~~~~-fD~~IvN--ddle~a~~~l~~I~-e~~~~ 179 (185)
T Consensus 149 R~~~~~~dr~E~~~~~f~~kVr~~Y~~la~~~~~r~~vIDa~~s~eeV~~~I~~~v~~~L~e 210 (216)
T PRK13973 149 RRGSETPDRFEKEDLAFHEKRREAFLQIAAQEPERCVVIDADASPEAVAAEIWAAVDQRLLE 210 (216)
T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
T ss_conf 35776300255647999999999999999859887899719999999999999999998621