HHsearch alignment for GI: 254781197 and conserved domain: TIGR02528
>TIGR02528 EutP ethanolamine utilization protein, EutP; InterPro: IPR012381 Members of this family function in ethanolamine and propanediol degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose , . More than 10f the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect , . The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella , , . Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 biogenic amine metabolic process.
Probab=96.02 E-value=0.003 Score=39.59 Aligned_cols=86 Identities=23% Similarity=0.384 Sum_probs=44.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCEE-E-EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEEC
Q ss_conf 99988999998999999985189817-9-986118889998323553000123542111027636445550486055443
Q gi|254781197|r 5 FVLIGASGVGETTIAKQVVLNSEYLV-M-PVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYGYLK 82 (185)
Q Consensus 5 ivi~GpSGsGK~tl~~~L~~~~~~~~-~-~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~flE~~~~~g~~YGt~~ 82 (185)
T Consensus 3 ~~f~G~~gCGKTTL~q~L~g~~~~YKKTQAvE~~~-------k~~ID----TP---------GEY~enr~----~Y~--- 55 (144)
T TIGR02528 3 IMFIGSVGCGKTTLTQALQGEEIKYKKTQAVEYKD-------KEAID----TP---------GEYVENRR----YYS--- 55 (144)
T ss_pred EEEEECCCCCHHHHHHHCCCCCCCEEEEEEEEECC-------CCCCC----CC---------CCCCCCCC----HHH---
T ss_conf 78871588874435431168732102334454258-------88655----98---------50015752----378---
Q ss_pred CCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHC
Q ss_conf 200233320123200243100013321055310112221
Q gi|254781197|r 83 EDINNPMEHGYDILLILTHQGLAPLKKLYEDQVTSIFIA 121 (185)
Q Consensus 83 ~~i~~~~~~g~~~il~id~~G~~~lk~~~~~~~~~IfI~ 121 (185)
T Consensus 56 -AL~vtaaDAd~i~lV---~~a~~~~~~f~PgF~~~f~k 90 (144)
T TIGR02528 56 -ALIVTAADADVIALV---QSATDEESRFSPGFASIFVK 90 (144)
T ss_pred -HHHHHHHCCEEEEEE---ECCCCCCCCCCCCCCCCCCC
T ss_conf -888887210236677---35776422378500023678