HHsearch alignment for GI: 254781197 and conserved domain: TIGR02788
>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..
Probab=97.02 E-value=0.00079 Score=42.98 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=27.7
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 718999889999989999999851898179986
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEYLVMPVG 34 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is 34 (185)
T Consensus 158 ~knIii~GGTgSGKTTf~kal~~~IP~~ER~iT 190 (328)
T TIGR02788 158 RKNIIISGGTGSGKTTFLKALVKEIPKDERLIT 190 (328)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
T ss_conf 891999906897189999999732762252788