HHsearch alignment for GI: 254781197 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=96.24 E-value=0.004 Score=38.85 Aligned_cols=21 Identities=43% Similarity=0.648 Sum_probs=13.5
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999889999989999999851
Q gi|254781197|r 5 FVLIGASGVGETTIAKQVVLN 25 (185)
Q Consensus 5 ivi~GpSGsGK~tl~~~L~~~ 25 (185)
T Consensus 599 FLFlGPTGVGKTElAK~LA~~ 619 (852)
T TIGR03345 599 FLLVGPSGVGKTETALALAEL 619 (852)
T ss_pred EEEECCCCCCHHHHHHHHHHH
T ss_conf 998789987789999999999