HHsearch alignment for GI: 254781197 and conserved domain: TIGR03574
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=97.85 E-value=5.6e-05 Score=49.68 Aligned_cols=122 Identities=19% Similarity=0.295 Sum_probs=65.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCC--CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEE
Q ss_conf 899988999998999999985189--817998611888999832355300012354211102763644555048605544
Q gi|254781197|r 4 IFVLIGASGVGETTIAKQVVLNSE--YLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYGYL 81 (185)
Q Consensus 4 iivi~GpSGsGK~tl~~~L~~~~~--~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~flE~~~~~g~~YGt~ 81 (185)
T Consensus 1 Livl~GlP~SGKSt~a~~L~~~l~~~~~~~i~~-~~d~~~-------~~~~~~~~~~Ek~~---------------r~~~ 57 (249)
T TIGR03574 1 LIILTGLPGVGKSTFSKELSKKLSEKNIDNIIL-GTDLIR-------ESFPVWKEKYEEFI---------------RDST 57 (249)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE-CCCCCH-------HHHHHCCHHHHHHH---------------HHHH
T ss_conf 978967899989999999999999829965996-552002-------12000336779998---------------9999
Q ss_pred CCCHHHHHHHCCCCCCCCC--CCCHH----HHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 3200233320123200243--10001----33210553101122213328999998863034207899999998
Q gi|254781197|r 82 KEDINNPMEHGYDILLILT--HQGLA----PLKKLYEDQVTSIFIAPPSEAELIQRRIKRREDTPFNLDPDLFG 149 (185)
Q Consensus 82 ~~~i~~~~~~g~~~il~id--~~G~~----~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~~d~~~~i~~rl~~ 149 (185)
T Consensus 58 ~~~v~~~l~~~~~vI~D~~nYiKg~RYEL~clAk~~~t~~c~I~~~~p-~e~c~~~N~~R~~~~~~e~i~~m~~ 130 (249)
T TIGR03574 58 LYLIKTALKNKYSVIVDDTNYYNSKRRDLINIAKEYNKNYIIIYLKAP-LDTLLRRNIERGEKIPNEVIKDMYE 130 (249)
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC-HHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 999999843376699727327889999999999984998699997399-9999998760689999999999999