HHsearch alignment for GI: 254781197 and conserved domain: TIGR03608
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=97.56 E-value=0.00011 Score=47.93 Aligned_cols=24 Identities=25% Similarity=0.517 Sum_probs=20.7
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 718999889999989999999851
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLN 25 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~ 25 (185)
T Consensus 24 Ge~~~i~GpSGsGKSTLL~~i~gl 47 (206)
T TIGR03608 24 GKMVAIVGESGSGKSTLLNIIGLL 47 (206)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 989999879997099999999759