HHsearch alignment for GI: 254781197 and conserved domain: cd03259
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.32 E-value=0.0003 Score=45.41 Aligned_cols=49 Identities=24% Similarity=0.270 Sum_probs=30.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEE-----EEECCCCCCCCCCCCCCCCCC
Q ss_conf 7189998899999899999998518981799-----861188899983235530001
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEYLVMP-----VGVTTRRPRVDEKQYIDYRFI 53 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~-----is~TTR~~R~~E~~g~dY~Fv 53 (185)
T Consensus 26 Gei~~iiGpnGaGKSTl~~~i~Gl~~p~~G~I~~~g~~i~~~~~~~---r~ig~v~Q 79 (213)
T cd03259 26 GEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPER---RNIGMVFQ 79 (213)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHH---CCEEEEEC
T ss_conf 9899999999973999999997599989708999999988899778---78699906