HHsearch alignment for GI: 254781197 and conserved domain: cd03269
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.12 E-value=0.00012 Score=47.65 Aligned_cols=25 Identities=32% Similarity=0.519 Sum_probs=21.7
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 7189998899999899999998518
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNS 26 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~ 26 (185)
T Consensus 26 Gei~gllG~NGaGKTTll~~i~Gl~ 50 (210)
T cd03269 26 GEIFGLLGPNGAGKTTTIRMILGII 50 (210)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 9599999899984999999996002