HHsearch alignment for GI: 254781197 and conserved domain: pfam01202
>pfam01202 SKI Shikimate kinase.
Probab=95.93 E-value=0.022 Score=34.50 Aligned_cols=55 Identities=7% Similarity=0.066 Sum_probs=30.8
Q ss_pred HHHHHHCCCCHHHHHHHHHHCCC-------CCHHHH----HHHHHHHHHCCCEEEECC--CHHHHHHHH
Q ss_conf 01122213328999998863034-------207899----999998763698899939--789999999
Q gi|254781197|r 115 VTSIFIAPPSEAELIQRRIKRRE-------DTPFNL----DPDLFGKNHSYSFTIVNN--HLPTACRQV 170 (185)
Q Consensus 115 ~~~IfI~pps~~~L~~RL~~R~~-------d~~~~i----~~rl~~~~~~fD~~IvNd--dle~a~~~l 170 (185)
T Consensus 86 g~vi~L~~-~~~~i~~Rl~~~~~RPll~~~~~~~~~~~l~~~R~~~Y~~~a~~~i~~~~~~~~ei~~~I 153 (158)
T pfam01202 86 GIVVYLDA-DPEVLLERLKADKTRPLLQDKDPEEELLELLFERCPLYEEAADIVVDTDESSPEEVAEEI 153 (158)
T ss_pred CEEEEEEC-CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHH
T ss_conf 92799849-999999997179999989899879999999999999999869999879999999999999