BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781202|ref|YP_003065615.1| hypothetical protein
CLIBASIA_05545 [Candidatus Liberibacter asiaticus str. psy62]
(864 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781202|ref|YP_003065615.1| hypothetical protein CLIBASIA_05545 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040879|gb|ACT57675.1| hypothetical protein CLIBASIA_05545 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120668|gb|ADV02491.1| hypothetical protein SC1_gp030 [Liberibacter phage SC1]
gi|317120812|gb|ADV02633.1| hypothetical protein SC1_gp030 [Candidatus Liberibacter asiaticus]
Length = 864
Score = 1782 bits (4616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 864/864 (100%), Positives = 864/864 (100%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK 60
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK
Sbjct: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK 60
Query: 61 ELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAE 120
ELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAE
Sbjct: 61 ELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAE 120
Query: 121 TKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHS 180
TKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHS
Sbjct: 121 TKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHS 180
Query: 181 QAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIA 240
QAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIA
Sbjct: 181 QAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIA 240
Query: 241 SFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI 300
SFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI
Sbjct: 241 SFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI 300
Query: 301 LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ 360
LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ
Sbjct: 301 LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ 360
Query: 361 EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVG 420
EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVG
Sbjct: 361 EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVG 420
Query: 421 IDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSG 480
IDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSG
Sbjct: 421 IDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSG 480
Query: 481 AEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKR 540
AEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKR
Sbjct: 481 AEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKR 540
Query: 541 AKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ 600
AKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ
Sbjct: 541 AKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ 600
Query: 601 QLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGE 660
QLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGE
Sbjct: 601 QLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGE 660
Query: 661 ALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKAL 720
ALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKAL
Sbjct: 661 ALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKAL 720
Query: 721 LRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAV 780
LRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAV
Sbjct: 721 LRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAV 780
Query: 781 ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK 840
ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK
Sbjct: 781 ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK 840
Query: 841 KGIELFQNMDEGLPHRLPFPFGED 864
KGIELFQNMDEGLPHRLPFPFGED
Sbjct: 841 KGIELFQNMDEGLPHRLPFPFGED 864
>gi|309702799|emb|CBJ02130.1| hypothetical phage protein [Escherichia coli ETEC H10407]
Length = 825
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 209/874 (23%), Positives = 357/874 (40%), Gaps = 98/874 (11%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R SL + L+ AER R AG A
Sbjct: 2 MRQECIQAVQQAAKRTLTAREIQDIEDRIYRNMRSLARDDPASWRQLTDAERLRRAGQLA 61
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
++ Q+E R +L + ++ Q G GK AL + F A S + +
Sbjct: 62 SDELQREAALKKRRVALTISARQRLDNFINNYQ-GADGKLGALNRTIAFSADGKSNFLSV 120
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 121 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVFEMRGQNTGNAKARKGAKAW 180
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 181 GEVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVTKDKWVSDVIGKLDRKYYTRSD 240
Query: 231 GTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G +S SE+ +F+GE + D + S R R HFKD+ +++ Y
Sbjct: 241 GQLMSDSELTAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 300
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA--SAGNK 345
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A S K
Sbjct: 301 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 359
Query: 346 VLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGAL 405
V +L E + + + V N A W +R+ AS LG + +
Sbjct: 360 V-------ERLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSF 410
Query: 406 LEDG--FISRQMLSRVGIDKEAIQRINKMPLKERME--LLSDVGLYAEGVVAHGRNMMEG 461
+ G ++S + ++ + +++ ++ M R E L GL E ++
Sbjct: 411 SDLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELALARRAGLAMESLLGSVNRWAMD 469
Query: 462 SDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRLD 520
+ + + + + SG ++ + + +G + L+ L +D R+
Sbjct: 470 NMGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRIL 529
Query: 521 PSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYH 580
S K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 530 KS-----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG--------- 575
Query: 581 RKKLKNSKTLSPEQ-RQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHT 639
PE+ + E ++L +E+++ + V +Q
Sbjct: 576 ----------EPERVKFEAMRKLLGAVTEEVDMAVITPGAREQMFVGSGLQ--------- 616
Query: 640 SLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHV 699
RGT GE R F + P + + S + MP A
Sbjct: 617 --------------RGTWKGELTRSVFLFKSFPISVVMR--HWSRAMGMPSAGGRAAYIA 660
Query: 700 WIQYSATMALAGIGVAS--IKALLRGEDPS------LPEVIYDGTLANGALLPYMDRLTK 751
S TM +G S I L+ G +P + + + L G Y D L
Sbjct: 661 TFLASTTM----LGALSMQITDLINGRNPKEMTGDHMVKFWINAFLKGGGAGLYGDFLFS 716
Query: 752 LVSKGDRAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNM 807
++ A+ +LGPV +V ++ A + NE + + K + +P N+
Sbjct: 717 DHTRYGSGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANL 776
Query: 808 WYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
WYLK + DH+I NQ+ E +PGYL + + + KK+
Sbjct: 777 WYLKAALDHMIFNQMQEYFSPGYLRKMEQRSKKE 810
>gi|332344341|gb|AEE57675.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 824
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 206/873 (23%), Positives = 366/873 (41%), Gaps = 96/873 (10%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K
Sbjct: 119 VESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYIRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E+++F+GE + D + S R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA--SAGN 344
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A S
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTG 357
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
KV +L + E + + + V N A W +R+ AS LG + +
Sbjct: 358 KV-------ERLANKTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSS 408
Query: 405 LLEDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMME 460
+ G ++S + ++ + +++ ++ M R EL GL E ++
Sbjct: 409 FSDLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAM 467
Query: 461 GSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRL 519
+ + + + + SG ++ + + +G + L+ L D R+
Sbjct: 468 DNMGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDYDFRI 527
Query: 520 DPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAY 579
S K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 528 LKS-----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG-------- 574
Query: 580 HRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHT 639
PE+ +K + K+ V + V +V
Sbjct: 575 -----------EPER------------------VKFEAMRKLLGAVTEEVDMAV-----I 600
Query: 640 SLFDRQRLGLLT-YKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNH 698
+ R+R+ + + +RGT GE R F + P + + + MP A
Sbjct: 601 TPGARERMFVGSGLQRGTWKGELTRSVFLFKSFPISVVMR--HWHRAMGMPSAGGRAAYI 658
Query: 699 VWIQYSATMALAGIGVASIKALLRGEDP------SLPEVIYDGTLANGALLPYMDRLTKL 752
+ A+ + G I L+ G +P ++ + + L G Y D L
Sbjct: 659 A--TFLASTTMLGALSMQITDLINGRNPKEMTGDNMVKFWINAFLKGGGAGLYGDFLFSD 716
Query: 753 VSKGDRAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMW 808
++ A+ +LGPV +V ++ A + NE + + K + +P N+W
Sbjct: 717 HTRYGSGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLW 776
Query: 809 YLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
YLK + DH+I NQ+ E +PGYL + + + KK+
Sbjct: 777 YLKAALDHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|298381705|ref|ZP_06991304.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|298279147|gb|EFI20661.1| conserved hypothetical protein [Escherichia coli FVEC1302]
Length = 824
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 204/873 (23%), Positives = 363/873 (41%), Gaps = 96/873 (10%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDQMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINNYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K
Sbjct: 119 VESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTDLLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E+++F+GE + D + S R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKV 346
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTG 357
Query: 347 LKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALL 406
+ +L + E + + + V N A W +R+ AS LG + +
Sbjct: 358 SVE-----RLANKTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFS 410
Query: 407 EDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGS 462
+ G ++S + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 411 DLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDN 469
Query: 463 DAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRLDP 521
+ + + + SG ++ + + +G + L+ L +D R+
Sbjct: 470 MGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILK 529
Query: 522 SIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHR 581
S K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 530 S-----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG---------- 574
Query: 582 KKLKNSKTLSPEQ-RQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTS 640
PE+ + E ++L +E+++ + V +Q
Sbjct: 575 ---------EPERVKFEAMRKLLGAVTEEVDMAVITPGAREQMFVGSGLQ---------- 615
Query: 641 LFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVW 700
RGT GE R F + P + + + MP A
Sbjct: 616 -------------RGTWKGELTRSVFLFKSFPISVVMR--HWHRAMGMPSAGGRAAYIAT 660
Query: 701 IQYSATMALAGIGVAS--IKALLRGEDP------SLPEVIYDGTLANGALLPYMDRLTKL 752
S TM +G S I L+ G +P ++ + + L G Y D L
Sbjct: 661 FLASTTM----LGALSMQITDLINGRNPKEMTGDNMVKFWINAFLKGGGAGLYGDFLFSD 716
Query: 753 VSKGDRAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMW 808
++ A+ +LGPV +V ++ A + NE + + K + +P N+W
Sbjct: 717 HTRYGSGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLW 776
Query: 809 YLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
YLK + DH+I NQ+ E +PGYL + + + KK+
Sbjct: 777 YLKAALDHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|300898440|ref|ZP_07116781.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300357907|gb|EFJ73777.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 824
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 204/873 (23%), Positives = 362/873 (41%), Gaps = 96/873 (10%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K
Sbjct: 119 VESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E++ F+GE + D + S R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSEFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKV 346
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTG 357
Query: 347 LKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALL 406
+ +L + E + + + V N A W +R+ AS LG + +
Sbjct: 358 SVE-----RLANKTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFS 410
Query: 407 EDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGS 462
+ G ++S + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 411 DLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDN 469
Query: 463 DAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRLDP 521
+ + + + SG ++ + + +G + L+ L +D R+
Sbjct: 470 MGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILK 529
Query: 522 SIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHR 581
S K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 530 S-----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG---------- 574
Query: 582 KKLKNSKTLSPEQ-RQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTS 640
PE+ + E ++L +E+++ + V +Q
Sbjct: 575 ---------EPERVKFEAMRKLLGAVTEEVDMAVITPGAREQMFVGSGLQ---------- 615
Query: 641 LFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVW 700
RGT GE R F + P + + + MP A
Sbjct: 616 -------------RGTWKGELTRSVFLFKSFPISVVMR--HWHRAMGMPSAGGRAAYIAT 660
Query: 701 IQYSATMALAGIGVAS--IKALLRGEDP------SLPEVIYDGTLANGALLPYMDRLTKL 752
S TM +G S I L+ G +P ++ + + L G Y D L
Sbjct: 661 FLASTTM----LGALSMQITDLINGRNPKEMTGDNMVKFWINAFLKGGGAGLYGDFLFSD 716
Query: 753 VSKGDRAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMW 808
++ A+ +LGPV +V ++ A + NE + + K + +P N+W
Sbjct: 717 HTRYGSGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLW 776
Query: 809 YLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
YLK + DH+I NQ+ E +PGYL + + + KK+
Sbjct: 777 YLKAALDHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|331648163|ref|ZP_08349253.1| hypothetical protein ECIG_04089 [Escherichia coli M605]
gi|331043023|gb|EGI15163.1| hypothetical protein ECIG_04089 [Escherichia coli M605]
Length = 824
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 209/877 (23%), Positives = 362/877 (41%), Gaps = 104/877 (11%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE Q+E + R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEE-LQREAALNKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKF-NEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ + V + G D+ D+ EM+G+ T N +A + K
Sbjct: 119 VESRTKATRDYALSQLQGAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E+++F+GE + D + S R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA--SAGN 344
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A S
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTG 357
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
KV +L E + + + V N A W +R+ AS LG + +
Sbjct: 358 KV-------ERLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSS 408
Query: 405 LLEDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMME 460
+ G ++S + ++ + +++ ++ M R EL+ GL E ++
Sbjct: 409 FSDLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELVRARRAGLAMESLLGSVNRWAM 467
Query: 461 GSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRL 519
+ + + + + SG ++ + + +G + L+ L +D R+
Sbjct: 468 DNMGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRI 527
Query: 520 DPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAY 579
S K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 528 LKS-----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG-------- 574
Query: 580 HRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHT 639
PE+ +K + K+ V + V +V
Sbjct: 575 -----------EPER------------------VKFEAMRKLLGAVTEEVDMAV------ 599
Query: 640 SLFDRQRLGLLT---YKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMAL 696
+ R L+T +RGT GE R F + P + + + MP A
Sbjct: 600 -ITPGAREQLITGSGIQRGTWKGELTRSVFLFKSFPISVVMR--HWHRAMGMPSAGGRAA 656
Query: 697 NHVWIQYSATMALAGIGVAS--IKALLRGEDP------SLPEVIYDGTLANGALLPYMDR 748
S TM +G S I L+ G +P ++ + + L G Y D
Sbjct: 657 YIATFLASTTM----LGALSMQITDLINGRNPKEMTGDNMVKFWINAFLKGGGAGLYGDF 712
Query: 749 LTKLVSKGDRAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPF 804
L ++ A+ +LGPV +V ++ A + NE + + K + +P
Sbjct: 713 LFSDHTRYGSGALASMLGPVVGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPG 772
Query: 805 MNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
N+WYLK + DH+I NQ+ E +PGYL + + + KK+
Sbjct: 773 ANLWYLKAALDHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|304398390|ref|ZP_07380264.1| hypothetical protein PanABDRAFT_3525 [Pantoea sp. aB]
gi|304354256|gb|EFM18629.1| hypothetical protein PanABDRAFT_3525 [Pantoea sp. aB]
Length = 921
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 219/945 (23%), Positives = 386/945 (40%), Gaps = 119/945 (12%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGI---VRAYVSLDGK----GLSKAERYR----L 49
MK C+ + + GR+ EL+ +ED I VR ++ + G A+ Y+ L
Sbjct: 1 MKQACVDAITQTLGRQPLASELKNIEDLISDSVRQVSRMNARAGKSGFPDADTYKQAADL 60
Query: 50 AGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--- 106
A + D K+ R +AI L ++ + SQ +F+ G
Sbjct: 61 AARRVVHDVFKKRQRLAQNAIAINNVTETLNRNVPAPEQTPKNLSQFIFSGRRVADGKEI 120
Query: 107 ---SAEV-----------PLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFG----L 148
SAE L ++ AA V F + +G + D++ G L
Sbjct: 121 DVVSAEELATGAFQDWSRQLSAEMTAAGGDVQKFFEQAQALGEQRFRNIFDQRVGKSSQL 180
Query: 149 DVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRA 207
+ E+ G+ T N A ++ + + + +++G D ++ +P D +RA
Sbjct: 181 QLLKEIYGEDTGNPAAKKIASIWSDVTSRARQEMNDSGFDIGQRDDWHLPYVDEADLVRA 240
Query: 208 TKKDDFVRSML----------------DWL------------DLSRYKDIDGTPLSRSEI 239
+++++ ++ DW D S++ + DGTP++ +
Sbjct: 241 AGREEWLATLPLAERTQARLAGRMPPGDWARRAWVDDIYNTQDRSQFVNPDGTPMNDVQY 300
Query: 240 ASFVGEVFAERVRSTSFK-DPSIPSSEVGVKREFE--RVFHFKDSQAHMDYMEHFGVSTN 296
+ +F + + K DP + G+K RV FKD+++H YME +
Sbjct: 301 REALEYIFETKATDGAQKLDPGAFAGSGGLKNRGSQSRVLAFKDAESHFGYMEKY-TQQP 359
Query: 297 VNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKL 356
V ++ S L + S+D+ + + GP+A + K +I I N V D G
Sbjct: 360 VVGVMMSHLQTASRDLGVVKAFGPDAGTNFK-LIADRIYQ-------NAVKVDGAGHPIA 411
Query: 357 EVRQEAML--QMWEVMRYGETVENTG-WANWMAGLRSAAGASMLGQHPIGALLEDGFISR 413
E+ +E L +M++ M V +T +++ + GLR+ ++MLG I A D + R
Sbjct: 412 EMNKERELVQRMFDSMAGLNGVNSTSVFSSAVGGLRNLMTSAMLGSSVITAT-SDQAVMR 470
Query: 414 QMLSRVGIDKEAIQ----RINKMPLKERMELLSDVGLYAEG---VVAHGRNMMEGSDAFQ 466
+G D+ ++ I + + +++GL + V+A M G D +
Sbjct: 471 AAAQALGFDRNGMRLSATTIRNLFSGDAKRANAELGLLVDAHSAVIAK----MGGFDLTR 526
Query: 467 -IGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKA 525
I K KWSG +D+ ++ L++Y IG +T YA+L LK + S K
Sbjct: 527 GITGWFAEKTLKWSGLIAMDRANKAAFGLLMYKNIGELTRRYATLDALKGSDKALLSSKG 586
Query: 526 FFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRD-LARMSDKI-AYHRKK 583
+ + D+ ++ A+ TP I + D +R LA D++ A +
Sbjct: 587 WSAE----DWAIMNAAELKPLTTSGHMGITPDAIYAVPDEKVRQILAGQIDRVRAGADEA 642
Query: 584 LKNSKTLSPEQRQELQQQL-ADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLF 642
L N ++ + L+Q A++E+ ++++ + L L + A+ T+
Sbjct: 643 LANLGAMTDSRATNLRQAYDAEVEQTISRMVRNARAEAAQKL-LGVTHGEMSQAITTAT- 700
Query: 643 DRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLS-NSAKMPKGASMALNHVWI 701
G+ TY R + GE + F F TTP F ++ + N ++P AL +
Sbjct: 701 -----GIDTYAR-DQGGELYKSFMLFKTTPFAGFRQMVTRAQNLDRVP-----ALKFL-A 748
Query: 702 QYSATMALAGIGVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLVSKGDR 758
Y L G+ + ALL G DP + P TL G Y D L + ++
Sbjct: 749 AYIGGTTLTGMFANQLNALLSGNDPIDMTKPGAWVGATLKGGGFGIYGDFLFQDHTQYGS 808
Query: 759 AAIGGLLGPVPSMVTNLTSSAV---ELATKDNENS-KVNATKAIRKTLPFMNMWYLKNSF 814
+ L GP + +L + + A + E S +A K R PF N+WY K
Sbjct: 809 SIAATLGGPSLGLAESLMKLLITNPQKAMQGEETSFGADAIKTARMITPFANLWYTKAVT 868
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
+HLIL Q+ E NPGY DR + + + + + + N + P R P
Sbjct: 869 NHLILQQLQEMANPGYNDRVRDRAQNQFDVTSWWNPGDTEPRRTP 913
>gi|85059173|ref|YP_454875.1| hypothetical protein SG1195 [Sodalis glossinidius str. 'morsitans']
gi|84779693|dbj|BAE74470.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 824
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 204/894 (22%), Positives = 359/894 (40%), Gaps = 138/894 (15%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
M+ ECIQ + A+ R L+ E++ +ED IV+ L + LS++ER + AG A
Sbjct: 1 MRQECIQAITAASKRTLTSAEIQGIEDRIVKNMRHLARNDPTSWRSLSESERMQRAGHMA 60
Query: 55 EEDFQKELI---RSVNDAIDEAYKRHQLRSDLDRVQAGVYGKS---QALFNKLFFKA-GS 107
E ++E R V I R LD AG GK +AL + F A G
Sbjct: 61 AEALEREATLKKRRVALTI-------AARQRLDNFIAGYKGKGGKLEALNRTIAFHADGK 113
Query: 108 AE-VPLEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQAS 165
A + +E + KA LS+ +E ++ + + DKQ D+ EM+G+ T N +A
Sbjct: 114 APFLSVESRTKATRDYALSQLDELFSAIDPRFFQLFEDKQGISDLVYEMRGQDTGNVRAK 173
Query: 166 RLVKQYFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLS 224
+ + + L + ++AG D E+ +PQ S++K+ + D+V ++ LD +
Sbjct: 174 KGAEAWKNVSELLRRRFNDAGGDIGHLEDWGMPQHHSMEKVGKATQSDWVGFVMGKLDRN 233
Query: 225 RYKDIDGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDS 281
+Y +G +S ++A F+G + D S R ER HFKD+
Sbjct: 234 KYVKENGELMSDKDVADFLGHAYKTIATGGMNKLGDSGRRLSGARANRGNAERQIHFKDA 293
Query: 282 QAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAN--DQE 339
+ ++ Y + FG ++ IL + L +SKDI + GPN D + ++ + A D+
Sbjct: 294 EGYLAYQQRFG-EKSMWDILVNHLDGMSKDIALVETYGPNPDQVFRSLLDELAAKTADET 352
Query: 340 ASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQ 399
S K+ KL+ + E + + + + N A W +R+ AS LG
Sbjct: 353 PSRTGKI-------KKLKNKTEDLYNF--IAGKTQPIANPHIARWADHVRNWLVASRLGS 403
Query: 400 HPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPL---------------KERMELLSDV 444
I +L ++G + ++N +P+ K+ + L
Sbjct: 404 ALISSLSDNGTMY------------LTAKVNNLPMAQLLRNQLAAMNPANKDEIRLARGA 451
Query: 445 GLYAEGVVAH----GRNMMEGSDAFQIGHKL--HSKMHKWSGAEYLDKKRISSHALIVYN 498
GL E ++ + M S + + + + S + WS A KR ++ + +
Sbjct: 452 GLAMETLLGSVNRWATDNMGPSPSRWVANAVMRASGLSAWSDAH----KR--AYGVTMMG 505
Query: 499 QIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPST 558
IG + +A + ++ D D ++K +K +SS D ++
Sbjct: 506 GIGNLVRKHADI-----------------AKIADEDARILK-SKGISSQDWKIW------ 541
Query: 559 IKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQEL-QQQLADLERKEINILKDKV 617
K A+ D N+ L+PE + ++LA L E +V
Sbjct: 542 ----KLAEQEDWGN------------GNTTMLTPESIMRIPNEKLAALGNAE------RV 579
Query: 618 SNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFL 677
+ +L V V A+ T + + +RG GE +R F + P + +
Sbjct: 580 KFEAMRKLLGAVSEEVDMAVVTPGARERMVTGAAMQRGDWRGELVRSVFLFKSFPIAVMM 639
Query: 678 NILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDP------SLPEV 731
S + MP A + A+ + G I ++ G +P +
Sbjct: 640 R--HWSRALNMPSAGGRAAYLA--AFLASTTVLGAMSQQISEVIAGRNPRDITGDKALQF 695
Query: 732 IYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTN----LTSSAVELATKDN 787
+ L G Y D L ++ A+ +LGPV +V + L +
Sbjct: 696 WVNAFLKGGGAGLYGDFLLSDHTRYGSGALASMLGPVAGVVDDAIKLLQGIPLNAVEGKP 755
Query: 788 ENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
E + + K + +P N+WY K FDH++ NQ+ E +PGYL R + + +K+
Sbjct: 756 EQTGGDLVKFAKGMIPGQNLWYTKAVFDHMVFNQLQEIFSPGYLRRMEKRSRKE 809
>gi|330007168|ref|ZP_08305910.1| hypothetical protein HMPREF9538_03599 [Klebsiella sp. MS 92-3]
gi|328535515|gb|EGF61975.1| hypothetical protein HMPREF9538_03599 [Klebsiella sp. MS 92-3]
Length = 924
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 221/951 (23%), Positives = 384/951 (40%), Gaps = 128/951 (13%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGI---VRAYV---SLDGK-GLSKAERYRLAGLK 53
MK CI + GR+ E++ +ED I VR + +GK G+ AE YR A
Sbjct: 1 MKQACIDAVANTLGRQPKADEIKNIEDRIKDAVRVIARRNAREGKTGIPDAETYRQAAEL 60
Query: 54 AEED-----FQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSA 108
A F+K R +AI A R L + + Q +F+ + G
Sbjct: 61 AAAQAVHAVFKKRQ-RVAQNAIAIAKVRDTLNKAIPENEQTPIALQQFIFSG---RRGRD 116
Query: 109 EVP---------------------LEMKIKAAETKVLSKFNEYAEVGSKNLG--FTLDKQ 145
+ P L ++ AA V F + +G + L D++
Sbjct: 117 KQPDINVVSAEEMATGAYQDWTRQLSAELTAAGDDVQKFFYQSQALGEQRLRNLLPFDRE 176
Query: 146 FG----LDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFEN-RIPQPM 200
L + E+ G+ T N A ++ K + + + +++G D ++ +P
Sbjct: 177 ASRSGQLQILKEIYGEDTGNPAAKKIAKVWGDVTSRARQEMNDSGFDIGLRDDWHLPYVD 236
Query: 201 SVDKLRATKKDDFVRSM---------------------LDWLD-------LSRYKDIDGT 232
+ +RA +D+++ S+ W+D S+Y ++DG+
Sbjct: 237 DAELIRAAGRDEWLSSLPLNERAAAIAAGRQPPQDFARQAWVDDVWNTQDRSQYVNLDGS 296
Query: 233 PLSRSEIASFVGEVFAERVRSTSFK-DPSIPSSEVGVKREFE--RVFHFKDSQAHMDYME 289
P++ E + ++ +V + K DP G+K RV FKD+++H YME
Sbjct: 297 PMNDIEYRQALEAIYETKVTEGANKIDPGAFMGSGGIKNRGSQSRVMAFKDAKSHFSYME 356
Query: 290 HFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKD 349
+ V ++ S L S S+D+ + + GP+A S K ++ Q + G +
Sbjct: 357 RY-TQQPVVGVMMSHLQSSSRDLGVVKAFGPDAASNFKLLMDQIYQRATSTTGGGHDIGT 415
Query: 350 WLGRNKLEVRQ-EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLED 408
+ +L R +M + V G GLR+ ++MLG A D
Sbjct: 416 MNDQRQLVERMFNSMAGLNGVASSSVFSSAVG------GLRNLMTSAMLGTSVFTAA-SD 468
Query: 409 GFISRQMLSRVGIDKEAIQRINKMPLK-----ERMELLSDVGLYAEGVVAHGRNMMEGSD 463
I R +G D+ + R++ L+ + +++GL + A M
Sbjct: 469 QAIMRANAQALGFDRNGM-RLSANTLRNLFNGDAKRANAELGLLVDAHAAVVSKMGGFDL 527
Query: 464 AFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSI 523
+ I K KWSG +D+ ++ L+++ IG ++ Y SL L R +
Sbjct: 528 SRGITGWFAEKTLKWSGLIAMDRANKAAFGLLMFKNIGELSRKYKSLDALTGSDRTVLAN 587
Query: 524 KAFFKQLDDTDFTVIKRAKAMS-SPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHR- 581
K + + D+ ++ A+ +PDG+ TP I ++ D +R++ ++D+I R
Sbjct: 588 KGWTPE----DWAIMSAAELRPLTPDGH-KGMTPDAIYDVPDETVRNI--LADRIEKVRV 640
Query: 582 ---KKLKNSKTLSPEQRQELQQQL-ADLERKEINILKDKVSNKMHALVLDNVQTSVRGAM 637
+ L ++ +R+ L+Q A++E+ ++++ + L L + A+
Sbjct: 641 GSDQALAALGDMTDAKRKTLKQAFDAEVEQTISRMVRNARAEAAQHL-LGITHGEMTSAV 699
Query: 638 HTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTP-TGMFLNILDLSNSAKMPKGASMAL 696
T+ GL + R T +G+ L+ F F TTP GM + L + MP A
Sbjct: 700 TTAT------GLDAFARDT-SGDLLKSFMLFKTTPMAGMRQFVTRLQDLETMPAVKFFA- 751
Query: 697 NHVWIQYSATMALAGIGVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLV 753
Y A LAG+ + ALL G DP + P+ L G+ Y D L +
Sbjct: 752 -----AYVAGTTLAGMFANQMNALLSGNDPLDMTKPQTWLQALLKGGSFGIYGDFLFQDH 806
Query: 754 SKGDRAAIGGLLGPVPSMV-----TNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMW 808
++ + G L GPV T LT+S +A ++ + +A K R PF N+W
Sbjct: 807 TQYGSSIAGILGGPVLGFAEQLSKTVLTNSQKAMAGEETTFT-ADALKTARMITPFANLW 865
Query: 809 YLKNSFDHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
Y K +HLIL Q+ E NPGY R + + ++ + E P R P
Sbjct: 866 YTKAITNHLILQQLQEMANPGYNARVRDRAMREFNTTSWWEPGEETPRRAP 916
>gi|30387396|ref|NP_848225.1| hypothetical protein epsilon15p17 [Enterobacteria phage epsilon15]
gi|30266051|gb|AAO06080.1| 17 [Salmonella phage epsilon15]
Length = 918
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 207/926 (22%), Positives = 376/926 (40%), Gaps = 119/926 (12%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGK-GLSKAERYRLAG-- 51
MK C++ + + GR+ EL+ +ED I A + +GK G+ A+ Y A
Sbjct: 1 MKQACVEAIAQTLGRQPKADELKGIEDRIKEAVRQVHKKNAKEGKTGIPDAQTYMEAADL 60
Query: 52 --LKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQ-----------AG---VYGKSQ 95
+ D K+ R +AI + L +++ Q AG GK
Sbjct: 61 VRQRVVHDVYKKRQRVAQNAIAISRVTDTLDANIPPEQQTPANLQQFIFAGRRTTDGKDI 120
Query: 96 ALFNKLFFKAGSAE---VPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFG----L 148
A+ + G+ + L ++ A V F + +G + D+Q
Sbjct: 121 AVTSAEELSTGAYQDWSRQLSAELLKAGDDVRKFFEQSKALGEQRFRSLFDQQAAKSAQF 180
Query: 149 DVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRA 207
+ E+ G+ T N QA ++ + + + + ++ G D ++ +P D +R
Sbjct: 181 QILKELYGEDTGNPQAKKIAQVWNDVTSRARQEMNDNGFDIGLRDDWHLPYVDDADFIRN 240
Query: 208 TKKDDFVRSM---------------------LDWL-------DLSRYKDIDGTPLSRSEI 239
+D+++ S+ W+ D S Y + DG+P++ E
Sbjct: 241 AGRDEWLASLPAAERAKAQLSGRQPPIEFARQAWVDDVYNTQDRSNYVNPDGSPMNDIEY 300
Query: 240 ASFVGEVFAERVRSTSFK-DPSIPSSEVGVKREFE--RVFHFKDSQAHMDYMEHFGVSTN 296
+ +F + + K DP G+K RV FKD+Q+H YME +
Sbjct: 301 RQALEAIFETKATDGANKIDPGAFMGTGGIKNRGSQNRVMAFKDAQSHFAYMERY-TQQP 359
Query: 297 VNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKL 356
V ++ S L S S+D+ + + GP+A ++ + Q A G K + +
Sbjct: 360 VAGVMMSHLQSSSRDLGVVKAFGPDAARNFSLVLDRVY---QRAVTGGKAV------GHM 410
Query: 357 EVRQEAMLQMWEVMR-YGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQM 415
++ + +M+ M ++ + + + GLR+ ++MLG + A D I R
Sbjct: 411 NEERKMVERMFNSMAGLNGAATSSVFTSAVGGLRNLMTSAMLGTSVLTA-TSDQAIMRAN 469
Query: 416 LSRVGIDKEAIQ----RINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKL 471
+G ++ ++ I + + +++GL + A M + I
Sbjct: 470 AQALGFTRDGMRLSANTIKNLFSGDAKRANAELGLLVDSHAAVVSKMGGFDLSRGITGWF 529
Query: 472 HSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLD 531
K KWSG +D+ ++ L++Y IG +T + +L D+K D +I A K
Sbjct: 530 AEKTLKWSGLIAMDRANKAAFGLLMYKNIGELTRKFKTLDDVKGS---DKTILA-NKGWS 585
Query: 532 DTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHR----KKLKNS 587
+ D+ ++ A+ TP I + D + + M+D+IA R + L
Sbjct: 586 NEDWAIMAAAELQPMTTAGHMGMTPDAIYAVPDNVITGI--MADRIAQVRAGSEEVLAAL 643
Query: 588 KTLSPEQRQELQQQL-ADLERKEINILKD---KVSNKMHALVLDNVQTSVRGAMHTSLFD 643
L PE+ + ++Q A+ E+ ++++ + + K+ + + ++V A
Sbjct: 644 GDLPPERLKRMRQAFDAEAEQTITRMVRNARVEAAQKLLGITHGEMTSAVTTAT------ 697
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSA-KMPKGASMALNHVWIQ 702
GL TY R AG+ ++ F F TTP F +++ +N +P +A
Sbjct: 698 ----GLDTYARDD-AGQLIKSFMLFKTTPFAGFRQLVNRANDLDTVPAIKFLA------S 746
Query: 703 YSATMALAGIGVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLVSKGDRA 759
Y A LAG+ + +LL G DP + P L G+ Y D L + ++ +
Sbjct: 747 YIAGTTLAGMFANQMNSLLTGNDPLDMTKPTTWVQALLKGGSFGIYGDFLFQDHTQYGSS 806
Query: 760 AIGGLLGPVPSMVTNLTSSAV---ELATKDNENS-KVNATKAIRKTLPFMNMWYLKNSFD 815
+ GPV S LT + + A + E S +A K R PF N+WY K +
Sbjct: 807 IAATIGGPVLSFAEQLTKLLITNPQKALQGEETSFGADALKTARMITPFANLWYAKAITN 866
Query: 816 HLILNQILEELNPGYLDRQQSKKKKK 841
HLIL Q+ E NPGY DR + + +++
Sbjct: 867 HLILQQLQEMANPGYNDRVRDRAQRE 892
>gi|215487808|ref|YP_002330239.1| hypothetical protein E2348C_2741 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265880|emb|CAS10289.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
Length = 824
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 167/346 (48%), Gaps = 15/346 (4%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + L+ AER R AG A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLNDAERLRRAGQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E+ R +L + ++ Q G GK AL + F A S + +
Sbjct: 61 AEELQREVALKKRRVALTIAARQRLDNFINSYQ-GADGKLGALNRTIAFSADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNEYAE-VGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E E V + G D+ D+ EM+G+KT N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQEVFEAVDPRFFGLFEDEAGVRDLVFEMRGQKTGNAKAMKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 GEVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E+++F+GE + D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDTELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQT 333
+ +G ++ I+ L +SKDI + GPN D + ++ QT
Sbjct: 300 QQMYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQT 344
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 759 AAIGGLLGPVPSMVTNLTS-------SAVELATKDNENSKVNATKAIRKTLPFMNMWYLK 811
A+ +LGPV +V ++ +AVE ++ V K + P N+WYLK
Sbjct: 723 GALASMLGPVAGLVDDVIKIGQGIPLNAVEGKSEQTGGDLVKLGKGL---TPGANIWYLK 779
Query: 812 NSFDHLILNQILEELNPGYLDRQQSKKKKK 841
+ DH+I NQ+ E +PGYL + + + KK+
Sbjct: 780 AALDHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|317120709|gb|ADV02531.1| hypothetical protein SC2_gp030 [Liberibacter phage SC2]
gi|317120770|gb|ADV02591.1| hypothetical protein SC2_gp030 [Candidatus Liberibacter asiaticus]
Length = 809
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 214/899 (23%), Positives = 376/899 (41%), Gaps = 151/899 (16%)
Query: 1 MKPECIQVLNKAAGR-ELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQ 59
MK ECI + AAG +LS ++ +E I ++ + +G+ +A A L ++ +
Sbjct: 1 MKEECINAVRVAAGELKLSDVDIEHIEHHI---RIAWEQEGVKQAG---FADLPLDQQIK 54
Query: 60 KELIRSVNDAIDEA--YKRHQLRSDLDRVQAGVYGKSQA--LFNKLFFKAGSAEVPLEMK 115
+ ++ + ++ YK ++L S G++Q L ++L A S +EM
Sbjct: 55 RVSKKAKSSFFSDSDRYKPYELLSTFK-------GENQVTELGHRLAHHATSGG-SIEMS 106
Query: 116 IKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQ 175
IK +KV +F +Y G+K GF D ++ ++G K N +A +L + ET
Sbjct: 107 IKGLRSKVFDRFKDYHTYGTKAFGFKNDVNAHTELLRALRGDKGVNPEALKLASIFHETM 166
Query: 176 RELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYK----DIDG 231
L +A G+ + +N PQPM K+ KD+FV L LD + Y+ D +G
Sbjct: 167 DFLVKEAKAVGIKFNPRDNYTPQPMDFRKISLVTKDEFVDRTLPRLDWAEYQKRGLDNEG 226
Query: 232 TPLSRSEIASFVGEVFA-------ERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAH 284
+ + FV +V+ +V ++ KD S S +G + R H+ Q
Sbjct: 227 S------LRQFVEDVYETLASEGRNKVIASGGKDHSGIS--LGGRLRQVRQLHYT-PQGL 277
Query: 285 MDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEAS--- 341
++ M+ FG V +++ +L +DI IARE G NA+ ++ D+E
Sbjct: 278 VEAMKEFGSDLTVEGMMSRSFDNLIRDIAIAREFGANANENFNFVLASMFERDREDINSR 337
Query: 342 -AGNKVLKDWLGRNKLEVRQEAMLQM-WEVMRYGETVENTGWANWMAGLRSAAGA----S 395
G+K K NKL+ ++E +QM W+ + G +T M + +A A +
Sbjct: 338 LEGDKKTK---ALNKLK-KEEMQVQMDWDGLTMGRKQPST-----MDKIVDSATAWTVIT 388
Query: 396 MLGQHPI---GALLEDGFISRQMLSRVGID-KEAIQRI-NKMPL--KERMELLSDVGLYA 448
LG + ++E F+ Q R+G K I I N P+ KER E + + +
Sbjct: 389 KLGSQSLYIPKEIIESAFMGSQ---RMGYTWKTNIANIWNASPVAGKERKEFIKSITVGL 445
Query: 449 EGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYA 508
E + +E + +G + K W G LD + + + + +G T +
Sbjct: 446 EHMATGFTRDLETNSQSVLG-VMAKKTMDWQGLTTLDNMMVRGLSATLQDYVGGFTRNFK 504
Query: 509 SLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLR 568
+ LK K++ + F I + D +K L AD
Sbjct: 505 DMDSLK-------------KKIGEQSFKSIIDEHRFNERD----------LKLLSLADTE 541
Query: 569 DL----ARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHAL 624
++DK Y ++ ++K L+P ++ D+ R LK ++NK
Sbjct: 542 SFKGKGTYLTDKNIY---RIDDTK-LTP-----FLKKGEDIYR-----LKSDLANKYRTF 587
Query: 625 VLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMF-LNILDLS 683
+ VQ RG++ +++ D++ +T K G+ R+ QF P ++++++
Sbjct: 588 IWSTVQEHARGSVGSTIQDKR---WITGKDGS-VNNLARLMGQFLVMPISWSRMHLIEIP 643
Query: 684 NSAKMPKGASMALNHVWIQYSATMALAGI-GVASIK----ALLRGEDPSL---PEVIYDG 735
+S G S + Y A + GI G I+ L+ G++P L Y
Sbjct: 644 SSL---VGVSSQV------YRAKALVIGILGEELIRKTLVPLISGKEPQLDFSDPTEYIK 694
Query: 736 TLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNAT 795
L NG + + +R + S G +LGP S L + E + +
Sbjct: 695 ALING--ITHYERFSPFNSSG-----WDVLGPWSSQAGKLAIAGKEAVWDEGTRKQRGKA 747
Query: 796 KA------IRKTLPFMNMWYLKNSFDHLILNQILEELNPG-------YLDRQQSKKKKK 841
+A + +PF N+WY + +F+H + N I + LNPG Y RQ+ KK++K
Sbjct: 748 QAQFGKELVNTFVPFQNLWYARGAFNHFVRNSIDDVLNPGGRARAEVYRQRQKYKKQRK 806
>gi|301028422|ref|ZP_07191668.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299878533|gb|EFI86744.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 918
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 207/939 (22%), Positives = 375/939 (39%), Gaps = 145/939 (15%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGK-GLSKAERYRLAGLK 53
MK C++ + + GR+ EL+ +ED I A + +GK G+ A+ Y A
Sbjct: 1 MKQACVEAIAQTLGRQPKADELKNIEDRIKEAVQHVHRKNAKEGKSGIPDAQTYMDAA-- 58
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQ--------LRSDLDRVQAGVYGKSQALFN--KLFF 103
EL+R + + YK+ Q + D + A + Q N + F
Sbjct: 59 -------ELVR--QRVVHDVYKKRQRVAQNAIAISKITDTLDANIPPDQQTPVNLQQFIF 109
Query: 104 KAGSAEVPLEMKIKAAETKVLSKFNEYAE----------------------VGSKNLGFT 141
+ ++ + +AE + + +++ +G +
Sbjct: 110 AGRRSRDKADISVTSAEELAIGAYQDWSRQLSAELLKAGDDVRKFFEQSRALGEQRFRSV 169
Query: 142 LDKQFG----LDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFEN-RI 196
D+Q L + E+ G+ T N A ++ + + + + + ++ G D E+
Sbjct: 170 FDRQAAKSAQLQILKEIYGEDTGNPLAKKIAQIWKDVTGRVRHEMNDNGFDIGLREDWHT 229
Query: 197 PQPMSVDKLRATKKDDFVRSM---------------------LDWL-------DLSRYKD 228
P D +R +++++ S+ W+ D S Y +
Sbjct: 230 PYVDDADLIRNAGREEWLASLPVAEQATARLSGRQPPIEFARQKWVDDAYNTQDRSNYVN 289
Query: 229 IDGTPLSRSEIASFVGEVFAERVRSTSFK-DPSIPSSEVGVKREF--ERVFHFKDSQAHM 285
DG+ ++ E + +F + + K +P G+K RV FKD+Q+H
Sbjct: 290 PDGSIMNDVEYRQALEAIFETKATDGANKIEPGTFMGAGGIKSRGSQHRVMAFKDAQSHF 349
Query: 286 DYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNAD---SFVKQMIVQTIANDQEASA 342
YME + V ++ S L S S+D+ + + GP+A+ S V I + A
Sbjct: 350 AYMERYTQQPLVG-VMMSHLQSSSRDLGVVKAFGPDAERNFSLVLDRIY------KRAVT 402
Query: 343 GNKVLKDWLGRNKLEVRQEAML--QMWEVMR-YGETVENTGWANWMAGLRSAAGASMLGQ 399
G G+ K E+ EA L +M+ M ++ +++ + GLR+ ++MLG
Sbjct: 403 G--------GKRKKEMEDEAKLVARMFNSMAGLNGVASSSVFSSAVGGLRNLMTSAMLGT 454
Query: 400 HPIGALLEDGFISRQMLSRVGIDKE----AIQRINKMPLKERMELLSDVGLYAEGVVAHG 455
+ A D I R +G + ++ I + + + +++GL + A
Sbjct: 455 SVLTA-TSDQAIMRANAQALGFTRGGMRLSVNTIKNLFSGDAKKANAELGLLVDSHAAVV 513
Query: 456 RNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKA 515
M + I K KWSG +D+ +S L++Y IG +T + +L D+K
Sbjct: 514 SKMGGFDLSRGITGWFAEKTLKWSGLIAMDRANKASFGLLMYKNIGELTRKFKTLDDMKG 573
Query: 516 DPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSD 575
D +I A K + D+ ++ A+ TP I + D + D+ M+D
Sbjct: 574 ---TDKTILA-NKGWSNEDWAIMAAAELRPMTTAGHMGMTPDAIYAVPDNVIADI--MAD 627
Query: 576 KIAYHR----KKLKNSKTLSPEQRQELQQQL-ADLERKEINILKDKVSNKMHALVLDNVQ 630
+I R K L L PE+ + +++ A+ E+ ++++ + L L
Sbjct: 628 RITRIRAGSEKALAALGDLPPERLKRMKEAFDAEAEQTITRMIRNARAEAAQKL-LGITH 686
Query: 631 TSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSA-KMP 689
+ A+ T+ G+ TY R AGE ++ F F TTP F +++ + +P
Sbjct: 687 GEMTNAVTTA------TGIDTYARDD-AGELMKSFMLFKTTPFAGFRQLVNRTRDLDTVP 739
Query: 690 KGASMALNHVWIQYSATMALAGIGVASIKALLRGEDP---SLPEVIYDGTLANGALLPYM 746
+A Y LAG+ + +LL G DP + P L G+ Y
Sbjct: 740 AIKFLA------SYIGGTTLAGMFAIQMNSLLNGNDPLDMTKPTTWVQALLKGGSFGIYG 793
Query: 747 DRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAV---ELATKDNENS-KVNATKAIRKTL 802
D + + ++ + + GPV S LT + + A + E S +A K R
Sbjct: 794 DFIFQDHTQYGSSIGATMGGPVLSFAEQLTKLLITNPQKALQGEETSFGADALKTARMIT 853
Query: 803 PFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
PF N+WY K +HLIL Q+ E NPGY DR + + +++
Sbjct: 854 PFANLWYAKAITNHLILQQLQEMANPGYNDRVRDRAQRE 892
>gi|332160979|ref|YP_004297556.1| hypothetical protein YE105_C1357 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665209|gb|ADZ41853.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862135|emb|CBX72299.1| hypothetical protein YEW_AK02360 [Yersinia enterocolitica W22703]
Length = 841
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 213/921 (23%), Positives = 373/921 (40%), Gaps = 151/921 (16%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL--DGKG---LSKAERYRLAGLKAE 55
M+ ECIQ + A GR +++ E++ +E+ I + + L D G +SKA+R R
Sbjct: 1 MRAECIQAVVNAIGRSITQAEVKGIENRINQHHKRLAQDTPGWMAMSKADRLR------- 53
Query: 56 EDFQKELIRSVNDAIDEAYKRHQLRSDL-----DRVQAGVYGKSQALFNKL----FFKAG 106
E +S D I K + R+ L DRV+ V + N L F +
Sbjct: 54 -----EAAKSAADEITREAKLKKWRTALTILAHDRVKNYVESSTDTPVNALGRLIAFDSD 108
Query: 107 --SAEVPLEMKIKAAETKVLSKFNEYAEVG-SKNLGFTLDKQFGLDVFDEMKGKKTQNEQ 163
S + +E + KA S+ + K L D + V E+ G+ + N
Sbjct: 109 QKSGVLSVESQAKAIRDIAYSQMLTLIDTTKGKFLSLLSDPESSKAVIKELHGEHSGNAA 168
Query: 164 ASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATK-KDDFVRSMLDWLD 222
A + K++ + L + + +G E+ P S +L+ K ++ +V + W D
Sbjct: 169 AKQSAKEFKDVAEFLRQRFNNSGGAIGRLES-WAMPRSHSQLKVAKNREAWVDDHVKWAD 227
Query: 223 LSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREF-----ERVFH 277
Y + DG+ +S +++ F A R +T + P +G R H
Sbjct: 228 RRSYVNEDGSRMSDAQLREFF--THAARTIATGGINKVEPGRFIGGSLRANHGSESRSIH 285
Query: 278 FKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNAD-SFVKQMIV--QTI 334
+KD+ + + + +G ++ +LT + L++DI + LGPN+D F QM + Q++
Sbjct: 286 YKDADSFILAQQKYG-DKDLLALLTGHIDRLARDIALTETLGPNSDLQFRTQMDMAQQSM 344
Query: 335 ANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGW-ANWMAGLRSAAG 393
N + A K+E + ++++ + + T W RS
Sbjct: 345 INAEPAKF-----------KKIESEMLRVERLYKDVAGQNDIPETPWLKEAFDTYRSINV 393
Query: 394 ASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPL----KERMELLS------- 442
AS LG I A+ + G + M++ ++N +P+ + ++LL+
Sbjct: 394 ASKLGSAAITAITDQGNL---MVT---------AKVNNLPVMQVFAQELKLLNPADSASR 441
Query: 443 --------DVGLYAEGVVAHGRNMMEGSDAFQIG------HKLHSKMHKWSGAEYLDKKR 488
+ Y G+ G + GS G K+ + + SG +
Sbjct: 442 EAARRAGLGINYYLNGLQRFGAETL-GSAGDTSGALSSSAQKIAGFVLRASGLNAMTAAG 500
Query: 489 ISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPD 548
+ +++ + IG MT +A+L L A R + + + D+ V ++A
Sbjct: 501 NQAFGMVMLDTIGGMTRKHANLAHLNAKDR----TRLQGMGVTEADWAVWRKA------- 549
Query: 549 GYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERK 608
D+ DL+ M D + H + L LS L +Q A K
Sbjct: 550 -----------------DVSDLSGMGDTVLTHNEIL----ALSDSALTPLAKQFATTPAK 588
Query: 609 EINILKDKVSNKMHALVLDNVQTSV--RGAMHTSLFDRQRLGL-LTYKRGTRAGEALRMF 665
L++ + K+ +V D Q +V GA R+R+ L RGT +GE R
Sbjct: 589 ----LRNTAATKLLGVVQDEAQMAVVEPGA-------RERVTLHRGTTRGTWSGEIWRSA 637
Query: 666 QQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGED 725
QF + P M ++ ++ A GA I ++T+ L G+ + + + G D
Sbjct: 638 TQFKSFPIAM---VMRHAHRALAQDGAGKGTYAAAIIAASTL-LGGMAI-QLNEIASGRD 692
Query: 726 P---SLPEVIYDGTLANGALLPYMDRLTKLVSKGDR---AAIGG-LLGPVPSMVTNLTSS 778
P + PE L GAL Y D L ++G A+IGG L G + S+V +
Sbjct: 693 PRDMTKPEFWGGAFLKGGALGLYGDFLLTNQTQGGNSFIASIGGPLAGDIESVVKMTQGA 752
Query: 779 AVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDR-QQSK 837
A + + ++ N + I+ P N+WY K + DH+I + I E+ +PGYL R +Q
Sbjct: 753 AFKAIDGKDPHTAANVVRFIKGHTPGANLWYAKAALDHMIFHDIQEQFSPGYLSRMRQRA 812
Query: 838 KKKKGIELFQNMDEGLPHRLP 858
+K+ + + E P R P
Sbjct: 813 QKEYDQQFWWAPGETAPDRAP 833
>gi|323156120|gb|EFZ42279.1| hypothetical protein ECEPECA14_1895 [Escherichia coli EPECa14]
Length = 824
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 145/590 (24%), Positives = 262/590 (44%), Gaps = 35/590 (5%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K
Sbjct: 119 VESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTDLLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E+++F+GE + D + S V R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGVRANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKV 346
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTG 357
Query: 347 LKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALL 406
+ +L + E + + + V N A W +R+ AS LG + +
Sbjct: 358 SVE-----RLANKTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFS 410
Query: 407 EDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGS 462
+ G ++S + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 411 DLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDN 469
Query: 463 DAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRLDP 521
+ + + + SG ++ + + +G + L+ L +D R+
Sbjct: 470 MGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILK 529
Query: 522 SIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLA 571
S K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 530 S-----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG 574
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 759 AAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
A+ +LGPV +V ++ A + +E + + K + +P N+WYLK +
Sbjct: 723 GALASMLGPVAGLVDDVVKIAQGIPLNAVEGKSEQTGGDLVKLGKGLMPGANLWYLKAAL 782
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKK 841
DH+I NQ+ E +PGYL + + + KK+
Sbjct: 783 DHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|117624699|ref|YP_853612.1| hypothetical protein APECO1_4054 [Escherichia coli APEC O1]
gi|115513823|gb|ABJ01898.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|323948672|gb|EGB44577.1| hypothetical protein ERKG_04895 [Escherichia coli H252]
Length = 824
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 149/592 (25%), Positives = 260/592 (43%), Gaps = 39/592 (6%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRMLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A K
Sbjct: 119 VESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARNGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYIRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E++SF+GE + D + S R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSSFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA--SAGN 344
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A S
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTG 357
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
KV +L E + + + V N A W +R+ AS LG + +
Sbjct: 358 KV-------ERLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSS 408
Query: 405 LLEDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMME 460
+ G ++S + ++ + +++ ++ M R EL GL E ++
Sbjct: 409 FSDLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAM 467
Query: 461 GSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRL 519
+ + + + + SG ++ + + +G + L+ L +D R+
Sbjct: 468 DNMGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRI 527
Query: 520 DPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLA 571
S K + DTD++V K AK +G TP +I + D+ ++ L
Sbjct: 528 LKS-----KGITDTDWSVWKLAKQEDWGNGNNTMLTPESIMRIPDSAVKHLG 574
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 759 AAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
A+ +LGPV +V ++ A + +E + + K + +P N+WYLK +
Sbjct: 723 GALASMLGPVAGLVDDVVKIAQGIPLNAVEGKSEQTGGDLVKLGKGLMPGANLWYLKAAL 782
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKK 841
DH+I NQ+ E +PGYL + + + KK+
Sbjct: 783 DHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|324008547|gb|EGB77766.1| hypothetical protein HMPREF9532_01734 [Escherichia coli MS 57-2]
Length = 824
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 149/592 (25%), Positives = 260/592 (43%), Gaps = 39/592 (6%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRMLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A K
Sbjct: 119 VESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQTTGNAKARNGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGRLDRKYYIRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E++SF+GE + D + S R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSSFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA--SAGN 344
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A S
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTG 357
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
KV +L E + + + V N A W +R+ AS LG + +
Sbjct: 358 KV-------ERLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSS 408
Query: 405 LLEDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMME 460
+ G ++S + ++ + +++ ++ M R EL GL E ++
Sbjct: 409 FSDLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAM 467
Query: 461 GSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRL 519
+ + + + + SG ++ + + +G + L+ L +D R+
Sbjct: 468 DNMGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRI 527
Query: 520 DPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLA 571
S K + DTD++V K AK +G TP +I + D+ ++ L
Sbjct: 528 LKS-----KGITDTDWSVWKLAKQEDWGNGNNTMLTPESIMRIPDSAVKHLG 574
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 759 AAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
A+ +LGPV +V ++ A + +E + + K + +P N+WYLK +
Sbjct: 723 GALASMLGPVAGLVDDVVKIAQGIPLNAVEGKSEQTGGDLVKLGKGLMPGANLWYLKAAL 782
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKK 841
DH+I NQ+ E +PGYL + + + KK+
Sbjct: 783 DHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|327252171|gb|EGE63843.1| hypothetical protein ECSTEC7V_3018 [Escherichia coli STEC_7v]
Length = 824
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 147/592 (24%), Positives = 261/592 (44%), Gaps = 39/592 (6%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K
Sbjct: 119 VESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYIRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E+++F+GE + D + S R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA--SAGN 344
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A S
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTG 357
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
KV +L E + + + V N A W +R+ AS LG + +
Sbjct: 358 KV-------ERLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSS 408
Query: 405 LLEDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMME 460
+ G ++S + ++ + +++ ++ M R EL GL E ++
Sbjct: 409 FSDLGTMYLSAK-VTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAM 467
Query: 461 GSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRL 519
+ + + + + SG ++ + + +G + L+ L +D R+
Sbjct: 468 DNMGPSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRI 527
Query: 520 DPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLA 571
S K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 528 LKS-----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG 574
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 759 AAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 723 GALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAAL 782
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKK 841
DH+I NQ+ E +PGYL + + + KK+
Sbjct: 783 DHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|319793417|ref|YP_004155057.1| hypothetical protein Varpa_2748 [Variovorax paradoxus EPS]
gi|315595880|gb|ADU36946.1| hypothetical protein Varpa_2748 [Variovorax paradoxus EPS]
Length = 838
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 203/907 (22%), Positives = 366/907 (40%), Gaps = 126/907 (13%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL----DGKGLSKAERYRLAGLKAEE 56
MKP CI + +A GR +S EL+ +ED I R L DG L+ +R+ A +A E
Sbjct: 1 MKPACIDAVIEAVGRPMSDAELKGIEDRIGRELRRLGNGPDGLRLTGEQRFFEAARRARE 60
Query: 57 DFQKEL-IRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAE---VPL 112
F E +++ DA+ A +H + +++ AG G A +L G A+ + +
Sbjct: 61 SFLGEQELKARRDAL--AVLKH---AQVEQALAGFPGDKIAGLRRLLAFHGDAKGSTLSV 115
Query: 113 EMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVF-DEMKGKKTQNEQASRLVKQY 171
E K +A E + E + + G+ EM G+ + +A ++
Sbjct: 116 ESKAEAIEADAFRQMLGTLEATNPKFFGLFESPEGVRALVREMFGEDSGVREAKEGAAEF 175
Query: 172 FETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
+ EL + ++AG + E+ +P S +K+ A + +V L+ RY++ D
Sbjct: 176 KKVADELLGRFNDAGGKIRPREDWGLPHHHSQNKIAAAGEAVWVEKTFPLLNRDRYRNED 235
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVK-----REFERVFHFKDSQAHM 285
G+ ++ S++ +F+ E + + +T + P + G R H++ + ++
Sbjct: 236 GSRMNDSQVLAFLRESY--QTLATGGVNTLEPGAGGGETMRANLHAAAREIHYRSADDYL 293
Query: 286 DYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQM--IVQTIANDQEASAG 343
Y + FG + +LT + L+ I + GPN D K + Q + +
Sbjct: 294 AYQKDFG-ERGLYDVLTGHVRGLADSIAMVETFGPNPDHAFKYFRDLAQREMTVADPTKH 352
Query: 344 NKVLKDWLGRNKL---------EVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGA 394
K+ K +G + L V E + Q ++ +R W+ A
Sbjct: 353 GKIAKQLVGLDNLYNYVSGKTLPVASEWLAQGFDSLR-----------KWLV-------A 394
Query: 395 SMLGQHPIGALLEDGFISRQMLSRVG-IDKEAIQR--INKMPLKERME--LLSDVGLYAE 449
S LG I +L ++ + Q+ +RV ID + R + + +ME + GL +
Sbjct: 395 SRLGSAFISSLPDEATM--QLTARVNNIDGMQVFRNELAALNPANQMEKRMAQRAGLALQ 452
Query: 450 GVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYAS 509
++ + + + K+ + + SG + + R + + + + +G +T
Sbjct: 453 TMIGSLNRFGDENMRNTLATKMATFTMRASGLNAITEARRRAFGVTMMSSLGHLT----- 507
Query: 510 LKDLKADPRLDPSIKAFF--KQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADL 567
+D +A +LDP K + D D+ V KRA+ G TP I + D L
Sbjct: 508 -RDAEAPSKLDPMDHRILLSKGITDADWQVWKRAELEDWGGGNGTMLTPEAIYRIPDEAL 566
Query: 568 RDLARMSDKIAYHRKKLKNSKTLSPEQ-RQELQQQLADLERKEINILKDKVSNKMHALVL 626
+ + +P+Q R++ +L + +E N+ + ++ A +
Sbjct: 567 VGIGNLD---------------ANPQQLRRDAATRLLGVVLEEQNMAVVEPGSRERAALY 611
Query: 627 DNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSA 686
N+Q RGT GE R F T P M + + S
Sbjct: 612 SNLQ-----------------------RGTWKGELTRSVFLFKTMPIAMLMRHWERGMSG 648
Query: 687 KMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGT---------- 736
P S A + S T + G+ I LL+G DP + ++G
Sbjct: 649 --PDARSKAGYIGALMVSTT--VMGMLALQIDELLKGRDP-VNMNPFEGKAGARNWVRAF 703
Query: 737 LANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVT---NLT-SSAVELATKDNENSKV 792
L G+L Y D L ++ I LGPV V LT + V+L + ++
Sbjct: 704 LKGGSLGIYGDFLFSEQNQHGGGPIASALGPVVGAVEEAFGLTQGNLVQLGQGKDTHAGA 763
Query: 793 NATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDE 851
K + P N+WYLK + +HLI NQ+ E ++PGYL R +S+ +++ G + + +
Sbjct: 764 ELLKFAKGMTPGANLWYLKAATNHLIFNQLQEMVSPGYLARVKSRAQREFGTTEWWDSRQ 823
Query: 852 GLPHRLP 858
+P R P
Sbjct: 824 AVPDRAP 830
>gi|89152441|ref|YP_512274.1| hypothetical protein PhiV10p20 [Escherichia phage phiV10]
gi|74055464|gb|AAZ95913.1| hypothetical protein PhiV10p20 [Escherichia phage phiV10]
Length = 824
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 172/355 (48%), Gaps = 17/355 (4%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K
Sbjct: 119 VESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y
Sbjct: 179 WREVTDLLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYIRA 238
Query: 230 DGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
DG ++ +E+++F+GE + D + S R R HFKD+ +++
Sbjct: 239 DGQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQ 298
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEAS 341
Y + +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 299 YQQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATAN 352
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 759 AAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 723 GALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAAL 782
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKK 841
DH+I NQ+ E +PGYL + + + KK+
Sbjct: 783 DHMIFNQMQEYFSPGYLRKMEQRSKKE 809
>gi|85059662|ref|YP_455364.1| hypothetical protein SG1684 [Sodalis glossinidius str. 'morsitans']
gi|84780182|dbj|BAE74959.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 507
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 196/430 (45%), Gaps = 38/430 (8%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
M+ ECIQ + A+ R L+ E++ +ED IV+ L + LS++ER + AG A
Sbjct: 6 MRQECIQAITAASKRTLTSAEIQGIEDRIVKNMRHLARNDPTSWRSLSESERMQRAGHMA 65
Query: 55 EEDFQKELI---RSVNDAIDEAYKRHQLRSDLDRVQAGVYGKS---QALFNKLFFKA-GS 107
E ++E R V I R LD AG GK +AL K+ F A G
Sbjct: 66 AEALEREATLKKRRVALTI-------AARQRLDNFIAGYKGKGGKLEALNRKIAFHADGK 118
Query: 108 AE-VPLEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQAS 165
A + +E + KA LS+ +E ++ + + DKQ+ D+ EM+G+ T N +A
Sbjct: 119 APFLSVESRTKATRDYALSQLDELFSAIDPRFFQLFEDKQWIRDLVYEMRGQDTGNVRAK 178
Query: 166 RLVKQYFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLS 224
+ + + L + ++AG D E+ +PQ S++K+ + D+V ++ LD +
Sbjct: 179 KGAEAWKNVSELLRRRFNDAGGDIGHLEDWGMPQYHSMEKVGKATQSDWVGFVIGKLDRN 238
Query: 225 RYKDIDGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDS 281
+Y +G +S ++A F+G + D S R ER HFKD+
Sbjct: 239 KYVKENGELMSDKDVADFLGHAYKTIATGGMNKLGDSGRRLSGARANRGNAERQIHFKDA 298
Query: 282 QAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAN--DQE 339
+ ++ Y + FG ++ IL + L +SKDI + GPN D + ++ + A D+
Sbjct: 299 EGYIAYQQRFG-EKSMWDILVNHLDGISKDIALVETYGPNPDHVFRSLLDELAAKTADET 357
Query: 340 ASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQ 399
S K+ KL+ + E + + + V N A W +R+ AS LG
Sbjct: 358 PSRTGKI-------KKLKNKTEDLYNF--IAGKTQPVANPHIARWADHVRNWLVASRLGS 408
Query: 400 HPIGALLEDG 409
I +L ++G
Sbjct: 409 ALISSLSDNG 418
>gi|315121926|ref|YP_004062415.1| hypothetical protein CKC_00880 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122888|ref|YP_004063377.1| hypothetical protein CKC_05720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495328|gb|ADR51927.1| hypothetical protein CKC_00880 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496290|gb|ADR52889.1| hypothetical protein CKC_05720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 810
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 201/902 (22%), Positives = 352/902 (39%), Gaps = 176/902 (19%)
Query: 1 MKPECIQVLNKAAGR-ELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQ 59
M PECI+ + K AG +L ++L ++E + + L+GL+ E F+
Sbjct: 1 MHPECIERVKKLAGEWKLEPEDLDQIE----------------RVSKQALSGLELNESFK 44
Query: 60 KELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQAL-----------FNKL-FFKAGS 107
+++ + + K H L ++ G + S+ L N L F
Sbjct: 45 N--LKTADKVKALSEKAHLLL-----LENGAFAMSETLGGVGRAKHGEQLNTLKNFLRYE 97
Query: 108 AEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRL 167
+E +IK + F+++ ++GSKNLGF+ D + ++G +T + Q ++
Sbjct: 98 TTASIESRIKGEQANARKAFHDFEDLGSKNLGFSADPITNEKITKALRGVETDDPQVNKF 157
Query: 168 VKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYK 227
+ Y + + + +QA + GL + PQP K+RA K ++ +++ W+D+ Y
Sbjct: 158 GRAYRKIRDRVTAQAEDMGLLHPLDNWGSPQPDDALKIRAKGKKAWIETIMPWVDVEAY- 216
Query: 228 DIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPS--------SEVGVKREFERVFHFK 279
D L + F+G V+ +S+ ++ + S + VG R+ R
Sbjct: 217 --DKKGLYGKGLTEFLGHVW--DTKSSEGRNKILASGGAEQAGKASVGGSRKQPRHLFLL 272
Query: 280 DSQAHMDYMEHFG-VSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAND- 337
D + + DY FG N ++ + L +DI IAR G NAD+ + +I Q ND
Sbjct: 273 D-EHYSDYNAAFGKTGLNAEDLVRMTIDPLIRDIEIARTFGSNADNNFRWVITQAYENDL 331
Query: 338 QEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASML 397
+ A + V K +G + +EA + +W+ + + + +N LR
Sbjct: 332 KSAKTASDVTK--MG----GLYKEANI-LWDRLTISSEMLDHELSNAQINLRE------- 377
Query: 398 GQHPIGALLEDGFISRQMLSRVGID-----KEAIQRI------NKMP-----LKERMELL 441
L+ GF + Q++ G+ E I + MP L E L
Sbjct: 378 --------LKSGFSTFQVVKSFGMQIFSALPETINCVVMGSHRQGMPFWSRALPEFKRHL 429
Query: 442 SDVGLYA---------EGVVAHGRNMMEGSDAFQIGHK-LHSKMHKWSGAEYLDKKRISS 491
++ A E + N F G K L K KW G + LD+ +
Sbjct: 430 TNANYKASIRAFAPAGEMAITGMMNEFHNQSKFVSGMKVLAEKTVKWQGLKALDRFQRDL 489
Query: 492 HALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYL 551
+ +G +T + L+D K+ + + T T+IK
Sbjct: 490 SFGFTSSWMGEVTRGFKGLEDFKS------------RYGEQTFKTLIKD----------- 526
Query: 552 YARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ----QLADLER 607
Y T S + L +L D R+ L+P+ +E + LA E
Sbjct: 527 YGFTQSDMHALSKVEL-DAGRL----------------LTPDSIRECRHPDLVTLARSEN 569
Query: 608 KEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQ 667
K I + +S+KM + Q + RG++ +SL D + T RG G L + Q
Sbjct: 570 KSIERMMGDLSSKMSGYIWSQTQDNARGSVGSSLRDTK----YTSSRGGIPG--LSLVTQ 623
Query: 668 FTTTPTGMFLNILDLSNSAKMPKGASMALN--HVWIQYSATMA----LAGIGVASIKALL 721
F TTP M L +PK N W + +A L GI + + L
Sbjct: 624 FLTTPISMAEKHL-----WAVPKTLVGGANGMSAWSYRAKFLAFGIVLEGIVANTARKAL 678
Query: 722 RGE---DPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSS 778
G+ D + P+V+ L L + DR + + + PV S V L +
Sbjct: 679 TGQELDDFTDPKVL---ALMTARTLTHYDRFFNEYHHDFKDLLHSV--PVASTVIGLGDA 733
Query: 779 AVELA-------TKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYL 831
+E++ + + K + +P N++Y+K +F ++++ + E N GY
Sbjct: 734 GLEVSRNIFGEDEEKKAKANAKLAKEVANNMPLKNLFYVKAAFQKMVVDNLCEYFNEGYK 793
Query: 832 DR 833
DR
Sbjct: 794 DR 795
>gi|169795397|ref|YP_001713190.1| putative phage related protein [Acinetobacter baumannii AYE]
gi|169148324|emb|CAM86189.1| conserved hypothetical protein; putative phage related protein
[Acinetobacter baumannii AYE]
Length = 841
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 195/890 (21%), Positives = 355/890 (39%), Gaps = 122/890 (13%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLK 53
MK +C Q + KA G++ LS +E +E I +L + + LS AE+ A +
Sbjct: 1 MKEQCKQAVAKALGKQSLSAQEATDIEARINETMRNLARKDINNWRNLSDAEKLTEAAKQ 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGK--SQALFNKLFFKAG--SAE 109
D Q++L R A + K+ Q + LD +GK S + +++ G S
Sbjct: 61 VAIDIQEQLKRKHKIAAQDILKQSQNIAALD------HGKLSSMEVIDRMVAAHGDMSGI 114
Query: 110 VPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRL-- 167
++ K + + + ++ LG D++ + E G+ T + A ++
Sbjct: 115 QSIDSKARGIASIYRGELVDFYTNIKGGLGVFTDQELVQKIVRERFGENTGDALAKKISD 174
Query: 168 -VKQYFETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSR 225
+ FET R+ + + G D +N +PQ +++K+ K+ +V +D +
Sbjct: 175 KMGDVFETMRD---RFNRNGGDIGKLDNWGLPQTHNLEKIAKAGKEAWVNKAESLIDTRQ 231
Query: 226 YKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIP-------SSEVGVKREFERVFHF 278
Y +G S+ EI S + E + + S + +S+V + RV HF
Sbjct: 232 YVHENGDYYSQQEIRSLL-EYTYDTLSSDGANKIEVGRQATGGGTSKVTNRHGESRVLHF 290
Query: 279 KDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQ 338
KD+++ ++Y FG V+ ++ + + LSKDI + LG N + +K ++ D
Sbjct: 291 KDAESWLEYQSEFGGMQFVD-LVEAHINGLSKDIAMVENLGSNPKTALKILMDAAAKKDW 349
Query: 339 EASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLG 398
E K K R ++E M++ + G + ++ AN RS A+MLG
Sbjct: 350 EGQIPEKTTKRV--RKRIET-------MFDELSGGNSPQSEVLANLGVLYRSMNVAAMLG 400
Query: 399 QHPIGALLEDGFISRQM----LSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAH 454
I ++ + I++ LS E + ++N +R EL +GL E ++
Sbjct: 401 GTTISSITDQAMIAKTANVHGLSYRKTFGELVDQLNPANKADR-ELAHSLGLATEEMI-- 457
Query: 455 GRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISS-HALIVYNQIG---RMTDTYASL 510
G D + K+ + S R+S +AL +++G + + Y L
Sbjct: 458 GSIARWSDDGLTSTYGKSEKLARISSGIASQVMRVSGLNALTAASKVGFTKLLMEKYGRL 517
Query: 511 KDLKADPRLDPSIKAFFKQ--LDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLR 568
KA LD + LD+ + V + A + D +
Sbjct: 518 SRSKAWNDLDAQDRELLSNTGLDERAWQVFQLADPV--------------------VDRK 557
Query: 569 DLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDN 628
MS + Y K + P+Q +KD+VS+++ A +LD
Sbjct: 558 GNQLMSARSIYEIPDEKLTAFGDPKQ------------------VKDQVSSQLQAHLLDE 599
Query: 629 VQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKM 688
+V + L R++ + RGT GE +R QF + + + + +
Sbjct: 600 QGLAV---VEAGL--REKTLINVGARGTITGEIVRGLAQFKSFSAAFLMRHGSRAFAQEG 654
Query: 689 PKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGT------------ 736
KG + +++ T+ L G V +K LL G D P+ IYD
Sbjct: 655 IKGKAGYAVPLFV----TLTLLGGLVVQLKELLNGND---PQTIYDSNDPKKAGSFFIRS 707
Query: 737 -LANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVN-- 793
+ G L D L R A + GP+ + T L V T+ NE N
Sbjct: 708 AVQGGGLSFLGDILVAGTDTSGRDANSFVAGPLGNDFTALLGLTVGNLTQYNEGKDTNFG 767
Query: 794 --ATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
A K ++ +P N+WY K + + ++ +++ + + PGY ++ K +++
Sbjct: 768 NEAFKFVKGKIPAQNLWYTKAAINRMVFDEMQDTIAPGYREKALRKAERQ 817
>gi|260548934|ref|ZP_05823156.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260408102|gb|EEX01573.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 841
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 198/891 (22%), Positives = 360/891 (40%), Gaps = 124/891 (13%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSLDGK------GLSKAERYRLAGLK 53
MK +C Q + KA G++ LS +E ++E I A ++ K LS +E+ A +
Sbjct: 1 MKEQCKQAVAKALGKQSLSAQEAIKIESRINEAMRNMARKDIDKWRNLSDSEKLIEASKQ 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLE 113
D Q++L R A ++ + + + LD + + + +++ G
Sbjct: 61 VAIDIQEQLKRKHKIAANDILTQSKNLAKLDHTRL----LASEVVDRMVAPHGDMSGIQS 116
Query: 114 MKIKA---AETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+ KA A+ + Y + LG DK+ + E + T + A ++ +
Sbjct: 117 ISSKADGIADIYEGELVDFYTNI-KGGLGIFTDKELVHKIVRERFNENTGDPLAKKISNK 175
Query: 171 ---YFETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRY 226
FET R+ + + +G D +N +PQ +++K+ K +V +D +Y
Sbjct: 176 MGDVFETMRD---RFNRSGGDIGMLDNWGLPQTHNLEKIAKAGKKAWVNKAESLIDTRQY 232
Query: 227 KDIDGTPLSRSEIASFVGEVF-------AERVRSTSFKDPSIPSSEVGVKREFERVFHFK 279
+G S+ EI S + + A ++ + +S+V K RV HFK
Sbjct: 233 VHENGDYYSQQEIRSLLEYTYDTLSSDGANKIE-VGRQATGAGTSKVTNKHSESRVLHFK 291
Query: 280 DSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQE 339
D+++ ++Y FG V+ ++ + + LSKDI + LG N + K I++ A+ ++
Sbjct: 292 DAESWLEYQSDFGGMQFVD-LVNAHIKGLSKDIALVENLGSNPKTAFK--ILKNAADKKD 348
Query: 340 ASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQ 399
AG KD N+ +V M++ G + ++ AN RS SMLG
Sbjct: 349 REAGRITTKDNPALNRAQV-------MFDEFSGGNSPQSQVLANLGIAYRSMNIFSMLGG 401
Query: 400 HPIGALLEDGFISRQM----LSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHG 455
+ + + I++ LS E I+++N +R EL +GL E ++ G
Sbjct: 402 TTVVSTTDQATIAKTAHVHGLSYRKAFGELIRQLNPANKADR-ELAHSLGLATEEML--G 458
Query: 456 RNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRIS-SHALIVYNQIG---RMTDTYASLK 511
D H K+ + S R+S +AL +++G + + Y L
Sbjct: 459 SIARWSDDGLTSTHGKSEKLARISSGVASLVMRVSLLNALTAASKVGFTKLLMEKYGRLS 518
Query: 512 DLKADPRLDPSIKAFFKQ--LDDTDFTVIKRAKAMSSPDG--YLYARTPSTIKNLKDADL 567
KA LD + LD+ + V + A+ + G + AR+ I + K A
Sbjct: 519 RSKAWGDLDIQDRELLSNTGLDERAWQVFQLAEPVVDRKGNQLMSARSIYEIPDEKLAAF 578
Query: 568 RDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLD 627
D P+Q +KD+V++++ A +LD
Sbjct: 579 GD----------------------PKQ------------------VKDQVASQLQAHLLD 598
Query: 628 NVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAK 687
+V + L R++ + RGT GE R QF + + + + +
Sbjct: 599 EQGMAV---IEAGL--REKTLINVGARGTITGEIFRGIVQFKSFSAAFLMRHGSRTMAQE 653
Query: 688 MPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDG------------ 735
KG + +++ T L G+ V +K LL G D P+ IYD
Sbjct: 654 GLKGKAAYAIPLFVM---TTLLGGL-VVQLKELLNGND---PQTIYDSNDPKKASNFFVR 706
Query: 736 TLANGALLPYM-DRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVN- 793
+ G L ++ D L R A + GP+ S +L S V T+ NE N
Sbjct: 707 SAVQGGGLSFLGDILVAGTDTSGRDAHSFVAGPLGSDFESLLSLTVGNLTQYNEGKDTNF 766
Query: 794 ---ATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
A + +++ +P N+WY K + + ++ ++I + + PGY ++ K ++K
Sbjct: 767 GNEAFQFVKRKIPAQNLWYTKAAINRMVFDEIQDFIAPGYREKALRKAEEK 817
>gi|268589387|ref|ZP_06123608.1| hypothetical protein PROVRETT_05519 [Providencia rettgeri DSM 1131]
gi|291315414|gb|EFE55867.1| hypothetical protein PROVRETT_05519 [Providencia rettgeri DSM 1131]
Length = 823
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 160/344 (46%), Gaps = 19/344 (5%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
M+ CI+ + A+ R+L+ +E++ +ED I+ + +L + LS++ER + AG A
Sbjct: 1 MRTACIEAIQNASKRQLTAREVQNIEDRIISSMRNLARNDPASWRLLSESERLQRAGQMA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
+ Q+E R +L ++ Q K +AL + F A S + +
Sbjct: 61 ATELQREADLKQRRVALTIAARQRLDEHINNFQG---SKLEALNRTIAFSADGKSNFMSV 117
Query: 113 EMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGL-DVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E E + Q G+ D+ EMKG+ T+N +A + +
Sbjct: 118 ETRAKATINYALSQLQEAFEAVDPKFFQLFEDQNGVRDLIFEMKGQDTRNVRAKKGAAAW 177
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
L + + AG D E+ +PQ S+ ++ +D +V ++ LD ++Y D
Sbjct: 178 HNVTGMLRNSFNRAGGDIGHLEDWGLPQSHSMQRVGKVTQDKWVSDVIGKLDRNKYIKED 237
Query: 231 GTPLSRSEIASFVGEVFAERVRS---TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMD 286
G+ ++ +E+ F+ + E + + D I S + R R HFKD++++++
Sbjct: 238 GSVMNDAELKQFLDSAY-ETIATGGLNKINDRPIGVSGMRANRGNASRQIHFKDAESYLE 296
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMI 330
Y + +G ++ I+ + +SKDI + GPN D + ++
Sbjct: 297 YQQLYG-EKSLWDIMVGHIEGISKDIGLIETYGPNPDHVFQSLL 339
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 760 AIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFD 815
A LLGPV +V + A + E + + K ++ +P N+WY K D
Sbjct: 722 AFASLLGPVAGVVDDAIKLAQGIPLNAVEGKPEQTGGDTVKFVKGLIPGQNLWYTKAVLD 781
Query: 816 HLILNQILEELNPGYLDRQQSKKKKK 841
H++ NQ+ E +PGYL R + + KK+
Sbjct: 782 HMVFNQLQEYFSPGYLRRMEKRSKKE 807
>gi|332875212|ref|ZP_08443045.1| hypothetical protein HMPREF0022_02678 [Acinetobacter baumannii
6014059]
gi|332736656|gb|EGJ67650.1| hypothetical protein HMPREF0022_02678 [Acinetobacter baumannii
6014059]
Length = 841
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 193/894 (21%), Positives = 355/894 (39%), Gaps = 130/894 (14%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLK 53
MK +C Q + KA G++ L+ +E +E I +L + + LS AE+ A +
Sbjct: 1 MKEQCKQAVAKALGKQSLTAQEATDIEARINETMRNLARKDINNWRNLSDAEKLSEAAKQ 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
D Q++L R A + K+ Q + LD + S + +++ G S
Sbjct: 61 VAIDIQEQLKRKHKIAAQDILKQSQNIAALDHSKL----SSMEVIDRMVAAHGDMSGIQS 116
Query: 112 LEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRL---V 168
++ K + + + ++ LG D++ + E G+ T + A ++ +
Sbjct: 117 IDSKARGIASIYRGELVDFYTNIKGGLGIFTDQELVQKIVRERFGENTGDALAKKISDKM 176
Query: 169 KQYFETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYK 227
FET R+ + + G D +N +PQ +++K+ K+ +V +D +Y
Sbjct: 177 GDVFETMRD---RFNRNGGDIGKLDNWGLPQTHNLEKIAKAGKEAWVNKAESLIDTRQYV 233
Query: 228 DIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIP-------SSEVGVKREFERVFHFKD 280
+G S+ EI S + E + + S + +S+V + RV HFKD
Sbjct: 234 HENGDYYSQQEIRSLL-EYTYDTLSSDGANKIEVGRQATGGGTSKVTNRHGESRVLHFKD 292
Query: 281 SQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA 340
+++ ++Y FG V+ ++ + + LSKDI + LG N + +K ++ +A
Sbjct: 293 AESWLEYQSEFGGMQFVD-LVEAHINGLSKDIAMVENLGSNPKTALKILM--------DA 343
Query: 341 SAGNKVLKDW---LGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASML 397
+A KDW + NK + ++ M++ G T ++ AN RS ASML
Sbjct: 344 AAK----KDWEKGIDENKTQSSRKRAQVMFDEFSGGNTPQSQVLANLGIAYRSMNVASML 399
Query: 398 GQHPIGALLEDGFISRQM----LSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVA 453
G I +L + I++ LS ++++N +R E +GL E ++
Sbjct: 400 GGTTIASLADQATIAKTAHVHNLSYRKAFGGIVEQLNPANKADR-EFAHGLGLATEEML- 457
Query: 454 HGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISS-HALIVYNQIG---RMTDTYAS 509
G D + K+ + S R+S +AL +++G + + Y
Sbjct: 458 -GSIARWSDDGLTSTYGKSEKLARISSGVATQVMRVSFLNALTSASKVGFTKLLMEKYGR 516
Query: 510 LKDLKADPRLDPSIKAFFKQ--LDDTDFTVIKRAKAMSSPDG--YLYARTPSTIKNLKDA 565
L KA LD + LD+ + V + A+ + G + AR+ I + K
Sbjct: 517 LSRSKAWNELDVQDRELLSNTGLDERAWQVFQLAEPVVDRKGNQLMSARSIYEIPDEKLT 576
Query: 566 DLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALV 625
D ++ D++A +LQ L D + +
Sbjct: 577 AFGDPKQVKDQVA-----------------SQLQAHLLDEQGMAV--------------- 604
Query: 626 LDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNS 685
++ +R +R + +GT GE + QF + + + +
Sbjct: 605 ---IEAGLR----------ERTWMTVGAKGTITGEVFKGLMQFKSFSASFLMRQGSRAMA 651
Query: 686 AKMPKG-ASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDG--------- 735
+ KG A+ A I +M L G V ++ +L G D P+ IYD
Sbjct: 652 QEGLKGKAAYA-----IPLMVSMTLLGGLVVQLREILNGND---PQTIYDSNDPKKATSF 703
Query: 736 ---TLANGALLPYM-DRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSK 791
+L G LP + D L R A + GP+ S T L V T+ NE
Sbjct: 704 FMRSLVAGGGLPVLGDILVAGTDTSGRDANSFVSGPLGSDFTALLGLTVGNLTQYNEGKD 763
Query: 792 VN----ATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
N A K ++ +P N+WY K + + + +++ + + PGY ++ K +++
Sbjct: 764 TNFGNEAFKFVKGKIPAQNLWYTKAAINRMFFDEVQDTIAPGYREKALRKAERQ 817
>gi|291334971|gb|ADD94604.1| hypothetical protein [uncultured phage MedDCM-OCT-S08-C233]
Length = 530
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 207/501 (41%), Gaps = 100/501 (19%)
Query: 380 GWANWMAGLRSAAGASMLGQHPIGALLEDGF----ISRQMLSRVGIDKEAIQRI-NKMPL 434
G A W A R+ + LG I A + G +S Q S +G E + + +
Sbjct: 72 GVAKWSAITRAVGNTAKLGGAVISAAADLGIYGSEMSFQGRSFLGGMYEGFKGLARRKNT 131
Query: 435 KERMELLSDVGLYAEGVV-------AHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKK 487
+++ +L+ +G A+GVV G N+ +G Q ++ + W+
Sbjct: 132 QDKKDLVEGMGFLADGVVYDVSGRHTVGDNLTKGWTRIQRTFFKYNLLSWWTNT------ 185
Query: 488 RISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFK--QLDDTDFTVIKRAKAMS 545
+ N + M + YA K+L D +L+ ++ FF +D + VI++
Sbjct: 186 -------LKENSMLGMANYYAKQKNLSFD-KLNKPLQEFFGLYNIDSVKWDVIRKNGMAK 237
Query: 546 SPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADL 605
+ DG + + + + DAD++ + + + L
Sbjct: 238 ADDGTEFINI-ANLDQISDADIKKITGIDN-----------------------------L 267
Query: 606 ERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYK--RGTRAGEALR 663
+ E+ I KDK + ++LD S+ + D + G++T GT GEA+R
Sbjct: 268 SKTELQIEKDKFKYSVSGILLDR---SIYAVIEP---DARVKGIMTQGLLAGTGMGEAIR 321
Query: 664 MFQQFTTTPTGMFLNILDL-----------------SNSAKMPKG----ASMALNHVWIQ 702
QF P + +L + A++ +G A++ + ++
Sbjct: 322 FVGQFKAFPMSIMNKVLGREMAYIRKGKKLGGLSTEAGRAEIGRGIRGMAALVITSGFMG 381
Query: 703 YSATMALAGIGVASIKALLRGEDPSLP---EVIYDGTLANGALLPYMDRLTKLVSKGDRA 759
Y A ++K LL+G++P P + I G L G L Y D L K + +
Sbjct: 382 YMAM---------TMKDLLKGKEPRDPTKFKTIMAGFLQGGGLGIYGDVLFK-EQRDAGS 431
Query: 760 AIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLIL 819
I GL+GP P+ V +L + + S A +AI +PF+N++Y+K +FD+LI
Sbjct: 432 VIAGLVGPAPTTVVDLGLALQYALLGEGGKSGKAAYRAISSNIPFLNLFYIKIAFDYLIG 491
Query: 820 NQILEELNPGYLDRQQSKKKK 840
QI+E +NPG L + + + KK
Sbjct: 492 FQIMETVNPGVLKKVERRMKK 512
>gi|303328566|ref|ZP_07359001.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861332|gb|EFL84271.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 855
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 170/779 (21%), Positives = 286/779 (36%), Gaps = 153/779 (19%)
Query: 143 DKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQREL-HSQAHEAGLDYKFFENRIPQPMS 201
DK F VF EM+ + ++ +R + F E + + AG D + PQ
Sbjct: 130 DKAFHDSVFREMREPDSTGDKNARAIADIFSRYTEQSRVRLNAAGADIGKLDGWTPQTHD 189
Query: 202 VDKLRA---TKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRS----- 253
KL A + +V ML LDL R DG VG V A R R
Sbjct: 190 PYKLMAGGEAGRAKWVDFMLPRLDLER--TFDG-----------VGLVDANRARELLNGV 236
Query: 254 ----TSFKDPSIPSSEVGVKREF------------ERVFHFKDSQAHMDYMEHFGVSTNV 297
T ++P +P G RV HFKD+Q ++Y + +G N+
Sbjct: 237 YDTLTMGRNPHMPGDFTGGGASVPGPRNLASGMGKSRVLHFKDAQGALEYHDAYG-RGNI 295
Query: 298 NTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLE 357
+ L ++ + + LGPN +++++ + LKD N +
Sbjct: 296 FDAMLRHLEQDARALALMERLGPNPQYTLERLLAHE----------KRALKD----NAVL 341
Query: 358 VRQEAMLQMWE--------VMRYGET----VENTGWANWM---------AGLRSAAGASM 396
+E QM E ++R G E TG +W A LR++ S
Sbjct: 342 TPEEKARQMRELDNAFSGGIIRQGRVSAWLAELTGETSWAVHPTLARVGAVLRASQNLSK 401
Query: 397 LGQHPIGALLEDGFISRQMLSRV-------GIDKEAIQRINKMPLKERMELLSDVGLYAE 449
LG + A+ + ++ RV I K Q I KE+ DV
Sbjct: 402 LGGASLSAIAD--VFTKAASMRVNGETWPGAIGKSLAQYIQGFSGKEK-----DVARQCG 454
Query: 450 GVVAHGRNMM-----EGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMT 504
+ H R + + S + L K+ +WSG ++ ++ + + L + +G ++
Sbjct: 455 AFLDHVRGDIVARWDDASGMPGVLADLQDKLFRWSGLNWITERGKAGYTLWLSEHLGEVS 514
Query: 505 DTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMS--SPDGYLYARTPSTIKNL 562
KA +LD +A Q D + + MS + DG Y TP L
Sbjct: 515 G--------KAFDQLDGPRRAML-QYHGVDPERWEAMRKMSHQAEDGKAYF-TPEAAAYL 564
Query: 563 KDADLRDLARMSDKIAYHRKKLKNSKTLSPE-QRQELQQQLADLERKEINILKDKVSNKM 621
DADL L +++K P+ Q +EL + L + +L D+
Sbjct: 565 TDADLAPLLP------------EHAKNAPPDVQARELARIRDSLRFDSMAMLADET---- 608
Query: 622 HALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNIL- 680
A + + R M + GT AGE R QF + P +L
Sbjct: 609 -AFAIIEPDDATRAIMRQGT-----------RPGTGAGEVWRAIMQFKSFPIAYMQRVLG 656
Query: 681 -------DLSNSAK-----MPKGASMALNH---VWIQYSATMALAGIGVASIKALLRGED 725
DL + +P AL + + + G ++K L +G +
Sbjct: 657 GRRWVRGDLQRGMRYGPRNLPGAVEDALTRDMGGLMGFVLSSVAFGYASMTLKDLAKGRE 716
Query: 726 P-SLP--EVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVEL 782
P SL E + +G + D L V++ + +GP+ ++ + + +L
Sbjct: 717 PRSLAHRETWLAAAMQSGGAGIFGDILFGKVNRFGNSFAETAVGPLGGLIGDAATLGGQL 776
Query: 783 ATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK 841
D ++ + + PF+N+WY + + D ++L + E ++PG L R + K KK+
Sbjct: 777 VRGDMADAGEDTLRLAMGNAPFINLWYTRAALDWMLLYHVREMMSPGTLRRTERKMKKE 835
>gi|294648411|ref|ZP_06725910.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825716|gb|EFF84420.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
Length = 854
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 149/349 (42%), Gaps = 24/349 (6%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLD------GKGLSKAERYRLAGLKA 54
MK EC + GR+L+ KE LE ++A L K +S ER +A
Sbjct: 1 MKNECRAAVEGVLGRKLTDKEADLLEQQFIKASRELPQEDIKAWKSMSDEERAEAIADRA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKL-FFKAGSAEVPLE 113
+++ + I+ V + I++ R L +L +AL KL F S +E
Sbjct: 61 IKNYTDQHIKEVTNLINDLEIREALEHEL--TSHSKLNPLEALNRKLVMFTDQSGIQSVE 118
Query: 114 MKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
I+A E + + + K LG+ +D + E+ GK + + + + L K +
Sbjct: 119 HNIQAIEVRYMGALADVFSKTQKGLGYLIDADKVKLLVKEIFGKPSGDAEIAGLAKSVQD 178
Query: 174 TQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGT 232
+L + G D K N IPQ S K+ + +++++ +D S+Y+ +G
Sbjct: 179 VLEQLRQHYNRYGGDIKKLANYGIPQSHSHYKVIQAGEGEWIKTTFPMVDKSKYRHENGK 238
Query: 233 PLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREF------------ERVFHFKD 280
++ +E+ + V+ + + S S+ + V + + R HFKD
Sbjct: 239 LMNDAEVKEVLKAVY-QTIASEGHNKASVQAHAVQSETDLPVGMNMQALHQHHREVHFKD 297
Query: 281 SQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQM 329
+ + Y E FG N + +L++ + +S +I + + G N + VKQ+
Sbjct: 298 PDSWVAYQEQFG-EVNFHDLLSNHIRRMSTEIGMMQTFGSNPEKLVKQL 345
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 23/249 (9%)
Query: 600 QQLADLERKEINILKDKVSNKMHALVLDNVQTSVR--GAMHTSLFDRQRLGLLTYKRGTR 657
Q+L+D+ + LK++++NK + +V GA ++ R +RGT
Sbjct: 595 QELSDIAFR----LKEQLANKYMNYIYTETNAAVLEVGARESTFMGLGR------ERGTV 644
Query: 658 AGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASI 717
E R F QF P M + + M +G + + A + G V+ I
Sbjct: 645 GNELSRFFWQFKQFPLAMIMRQW----TRGMAQGTPQEKFVYFAKLFAYTTVMGALVSQI 700
Query: 718 KALLRGEDPSLPEVI--YDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGP-----VPS 770
+ L +G+D P + Y ++ G ++ S ++ + P + S
Sbjct: 701 QNLTQGKDLDDPTTLDFYMKSIVKGGSASFLADAISATSDPTERSVKDFIIPAAFKDITS 760
Query: 771 MVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGY 830
+ T ++ + T+ + + A ++ +PF N+WY + FD L++ ++ E + GY
Sbjct: 761 IGTMVSGAGSAFITERDSSYGAEAVNVVKNNIPFQNLWYSRLVFDRLVIAEMQELFDEGY 820
Query: 831 LDRQQSKKK 839
+R+Q +++
Sbjct: 821 RERKQRRQE 829
>gi|320175032|gb|EFW50145.1| 17 [Shigella dysenteriae CDC 74-1112]
Length = 236
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 118/233 (50%), Gaps = 13/233 (5%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAER-YRLAGLK 53
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER YR A L
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDTMSWRQLSESERLYRAAQLA 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
+EE ++ ++ A+ A R +L ++ Q G GK AL + F A S +
Sbjct: 61 SEELQREAALKKRRVALTIA-ARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLS 118
Query: 112 LEMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
+E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K
Sbjct: 119 VESRTKATREYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKA 178
Query: 171 YFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLD 222
+ E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD
Sbjct: 179 WREVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLD 231
>gi|298485996|ref|ZP_07004070.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159473|gb|EFI00520.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 831
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 35/342 (10%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK 60
M C + + +A GR L K E + D I S + L++ + + + ++
Sbjct: 3 MSANCKREVEQAIGRPLKKSEADAINDKI-----SFHIRDLARTDPTKFNAMTEQQRQLA 57
Query: 61 ELIRSVNDAIDEAYKRHQLRS----------DLDRVQAGVYGKSQALFNKLFFKAGSAEV 110
++ D + + K+ Q + D +A V G Q + LF + +
Sbjct: 58 GAQAAMADHMADVAKKAQRKGLNLLAQTRELDNQTARAAVLGGKQPFTSALFERLRQVDT 117
Query: 111 PLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
++ + A T ++ + K +G +K D E+ G+ + N A K
Sbjct: 118 RIKGERNRAFTSIM---DTIMAAEPKFMGLITNKAVERDFVHEVFGQDSGNAIAKNAAKV 174
Query: 171 YFETQRELHSQAHEAG-----LDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSR 225
+ + + + + AG LDY + +PQP S+ K+R ++ +L LD R
Sbjct: 175 WRDQMDSIRERQNAAGADIGRLDYGW----LPQPHSLVKVRRAAPQEWASFVLGRLDRRR 230
Query: 226 YKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKR-----EFERVFHFKD 280
Y + DGT ++ ++ F+ + A T + P + G R R HFKD
Sbjct: 231 YLNEDGTQMNDGQVTDFL--LAAHETLRTDGLNKMTPGTGNGSSRAAKHDNAHRQIHFKD 288
Query: 281 SQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNA 322
++++YM FG T+V + + + KD V+ +LGPNA
Sbjct: 289 GDSYLEYMRDFG-PTSVFEAMNGSVHAQIKDTVLTEQLGPNA 329
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 754 SKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNAT--KAIRKTLPFMNMWYLK 811
++G ++ + GLLGPV ++ + + + E + V A + + PF+ WY K
Sbjct: 715 NRGGQSNLTGLLGPVYGTAADVGLTLGSVFKEKTEPADVGANLLRIGYQNTPFIRSWYTK 774
Query: 812 NSFDHLILNQILEELNPGYLDRQQSKKKKKGIELF-QNMDEGLPHRLP 858
+F+H +++ + E L+PGYL R + + KK + F E P R P
Sbjct: 775 AAFEHAVMHDMQEMLSPGYLSRMKKRAKKDFNQRFWWEPGETAPSRAP 822
>gi|293609607|ref|ZP_06691909.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828059|gb|EFF86422.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 1175
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 190/438 (43%), Gaps = 48/438 (10%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLK 53
MK +C Q + KA G++ L+ +E +E I +L + + LS AE+ A +
Sbjct: 1 MKEQCKQAVAKALGKQSLTAQEATDIEARINETMRNLARKDINNWRNLSDAEKLTEAAKQ 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGK--SQALFNKLFFKAG--SAE 109
D Q++L R A + K+ Q + LD +GK S + +++ G S
Sbjct: 61 VAIDIQEQLKRKHKIAAQDILKQSQNIAALD------HGKLSSMEVIDRMVAAHGDMSGI 114
Query: 110 VPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRL-- 167
++ K + + ++ LG D++ + E G+ T + A ++
Sbjct: 115 QSIDSKARGIAAIYRGELVDFYTNIKGGLGIFTDQELVQKIVRERFGESTGDALAKKISD 174
Query: 168 -VKQYFETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSR 225
+ FET R+ + + G D +N +PQ +++K+ K +V +D +
Sbjct: 175 KMGDVFETMRD---RFNRNGGDIGKLDNWGLPQTHNLEKIAQAGKQAWVSKAESLIDTRQ 231
Query: 226 YKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIP-------SSEVGVKREFERVFHF 278
Y +G S+ EI S + E + + S + +S+V + RV HF
Sbjct: 232 YVHENGDYYSQQEIRSLL-EYTYDTLSSDGANKIEVGRQATGGGTSKVTNRHGESRVLHF 290
Query: 279 KDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQ 338
KD+++ ++Y FG V+ ++ + + LSKDI + LG N + +K ++
Sbjct: 291 KDAESWLEYQSDFGGMQFVD-LVEAHINGLSKDIAMVENLGSNPKTALKILM-------- 341
Query: 339 EASAGNKVLKDW---LGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGAS 395
+A+A KDW + N+ + ++ M++ + G T ++ AN RS AS
Sbjct: 342 DAAAK----KDWEKGIEENQTKSSRKRAQVMFDELSGGNTPQSQVLANLGIAYRSMNVAS 397
Query: 396 MLGQHPIGALLEDGFISR 413
MLG I +L + I++
Sbjct: 398 MLGGTTIASLADQATIAK 415
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 613 LKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTP 672
++D+V++++ A +LD +V + L R+R + +GT GE + QF +
Sbjct: 918 IRDEVASQLQAHLLDEQGMAV---IEAGL--RERTWMTVGAKGTITGEVFKGLMQFKSFS 972
Query: 673 TGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVI 732
+ S M + I +M L G V ++ +L G DP + I
Sbjct: 973 ASFLMR----QGSRAMAQEGLKGKAAYAIPLMVSMTLLGGLVVQLREILNGNDP---QTI 1025
Query: 733 YDG------------TLANGALLPYM-DRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSA 779
YD +L G LP + D L R A + GP+ S T+L
Sbjct: 1026 YDSNDPKKATSFFMRSLVAGGGLPVLGDILVAGTDTSGRDANSFVSGPLGSDFTSLLGLT 1085
Query: 780 VELATKDNENSKVN----ATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGY----- 830
V T+ NE N A K ++ +P N+WY K + + ++ +++ + + PGY
Sbjct: 1086 VGNLTQYNEGKDTNFGNEAFKFVKGKIPAQNLWYTKAAINRMVFDEMQDTIAPGYREKAL 1145
Query: 831 --LDRQQSKKK 839
+RQQ +++
Sbjct: 1146 RKAERQQDRER 1156
>gi|167041093|gb|ABZ05854.1| hypothetical protein ALOHA_HF400048F7ctg1g21 [uncultured marine
microorganism HF4000_48F7]
Length = 828
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 126/608 (20%), Positives = 227/608 (37%), Gaps = 102/608 (16%)
Query: 258 DPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARE 317
+P + + K R HF+DS A ++Y + +G S V I+ + LS + + +
Sbjct: 277 EPGVGRKSLSTKISQSRQLHFRDSAAWIEYNKKYGHSNAVQAIVQG-VGHLSDSLELIKV 335
Query: 318 LGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAML--QMWEVMRYGET 375
G N D K++ L R + Q ML + +V
Sbjct: 336 FGANPDGTFKRL---------------------LERQDFDPGQRTMLRSEYNQVSGAAFE 374
Query: 376 VENTGWANWMAGLRSAAGASMLGQ-------HPIGALLEDGFISRQMLSRV--GIDKEAI 426
V N W W G+++ S LG PI + + + S +
Sbjct: 375 VANPAWHKWTQGIQAIQNLSKLGSAIFSSTTDPIYVAFTQHYHGKNIFSAYYNAFLNIGV 434
Query: 427 QRINKMPLKERMELLS-DVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLD 485
R+ + + +E+ + +GL +GV+ S +WSGA+ D
Sbjct: 435 GRLLQRGKSKEIEMFARKLGLGFDGVIG-------------------SAASRWSGAK--D 473
Query: 486 KKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMS 545
A+ + + L L A+ D D T + K
Sbjct: 474 TTEFMQGAV----------NNFFRLNGLSGWTNFYREGAAYLMASDMADATKLNWDKL-- 521
Query: 546 SPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADL 605
+P+ Y R + D+D +D+A + +K+ +SP R + +L ++
Sbjct: 522 APN---YRRLLERY-GITDSDWKDIAGLP------FEKINGLDVISP-TRVFDEIELGNI 570
Query: 606 ERKEINILKDKVSNKMHALVLDNVQTSVR-GAMHTSLFDRQRLGLLTYKRGTRAGEALRM 664
I ++ L+ +N ++ GA + R G K GT A ++
Sbjct: 571 TGDAIPRSRELAEKIQQVLITENEFAVLQPGANERAFMGRFFTGEEGIKSGTPMAMANKL 630
Query: 665 FQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGE 724
F QF + M + P+ M L + + M L G ++K +L+G
Sbjct: 631 FWQFRSFGLTMLFR--------QWPRAYEMGLPSFY--HLVPMVLMGYVAMAMKDILKGR 680
Query: 725 DPSLPEVIYD-GTLANGALLP------YMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLT- 776
+ L +V+ D G +A ++L D L + + + L GP S + +L
Sbjct: 681 E--LKDVVEDPGKIAVASVLQSGFGGIAGDFLFNDYRQYSTSYVDLLAGPSGSSLNDLAE 738
Query: 777 --SSAVELATK-DNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDR 833
++ ++AT D ++ +A++ +P+ N W + FD+LI Q+ E LNPG L R
Sbjct: 739 FGATTFDVATGGDPVDAAAAGWRAVKGNIPYANWWASRTLFDYLINYQVQEILNPGSLRR 798
Query: 834 QQSKKKKK 841
+ + K+K
Sbjct: 799 MERRFKQK 806
>gi|226953662|ref|ZP_03824126.1| phage related protein [Acinetobacter sp. ATCC 27244]
gi|226835534|gb|EEH67917.1| phage related protein [Acinetobacter sp. ATCC 27244]
Length = 842
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 173/425 (40%), Gaps = 39/425 (9%)
Query: 1 MKPECIQVLNKAAG-RELSKKELRRLEDGIVRAYVSL-----DGKGLSKAERYRLAGLKA 54
M+ EC + + KA G R+LS + R+ +RA +L D S AER K
Sbjct: 1 MRAECREQVAKALGKRKLSAADSNRISSLYIRAQNTLARTDPDWMFKSPAERAEAIAQKT 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKL-FFKAGSAEVPLE 113
D ++ ++ + +A + QL++++ QAL K+ +F S +E
Sbjct: 61 ATDLAVQIAKNNQNIARDAIIKAQLQNEI--YNHPKLNPVQALMRKIAYFSDQSGIQSIE 118
Query: 114 MKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
+ +A ++ +S + + G +++K D+ M G K+ N + + + K+
Sbjct: 119 KQSQALHSRWMSLVADVFTKTQERFGMSVNKAMTDDIIRVMFGGKSDNPEITAMAKEVSA 178
Query: 174 TQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGT 232
E+ + AG + K +N K+ T + ++V L +D ++Y G
Sbjct: 179 ALEEMRLAFNRAGGNIKKLDNFGFMTSHDQKKVALTDQSEWVNDALAGVDRNQYVKETGE 238
Query: 233 PLSRSEIASFVGEVFAERVRSTSFKD-------------PSIPSSEVGVKREFERVFHFK 279
+ E+ S + E++ + + KD P S++ + + R HFK
Sbjct: 239 LMDELELKSMLEEIYKTISTNGANKDLLILNKQAKAGASPVGGRSKMANRHQESRALHFK 298
Query: 280 DSQAHMDYMEHFGV--STNVNTILTSELASLSKDIVIARELGPNA----DSFVKQMIVQT 333
D A + Y + +G + IL + +S ++ + + LG N +S + + ++
Sbjct: 299 DGDAWLAYQKKYGTYDEAGFHEILKNHTHRMSTEVAMMQNLGSNPRNTFESLLDEAKIKL 358
Query: 334 IANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAG 393
A+ Q + +++ + + M+ + ++ N M GLR+
Sbjct: 359 KADPQNG----------MKHGEIDKQAHRAMSMYNTLDANTRAIDSTLGNVMGGLRALMV 408
Query: 394 ASMLG 398
AS LG
Sbjct: 409 ASKLG 413
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 705 ATMALAGIGVASIKALLRGEDPSLPEVI--YDGTLANGALLPYM-DRLTKLVSKGDRAAI 761
A LAG + + L G++P I + +L G L ++ D ++ L R+A
Sbjct: 688 AYQTLAGALIVQTQNLANGKNPEPVFTIDFFGKSLLKGGGLSFLGDIMSALSDPTGRSAS 747
Query: 762 ----GGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHL 817
G LLG + LT + + ++ +P N+WY K D +
Sbjct: 748 DFISGPLLGQSMKLGMLLTGMGNNIIEGKESTRMMEVANTLKSNIPLQNLWYSKLVVDRM 807
Query: 818 ILNQILEELNPGYLDRQQSKKKKKGIELFQNMDE 851
+ +++ ++P YL R Q + + G + ++ E
Sbjct: 808 LYSKMQNMIDPDYLPRTQQRLENLGNSYWWDLSE 841
>gi|262371858|ref|ZP_06065137.1| predicted protein [Acinetobacter junii SH205]
gi|262311883|gb|EEY92968.1| predicted protein [Acinetobacter junii SH205]
Length = 841
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 175/424 (41%), Gaps = 37/424 (8%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSL-----DGKGLSKAERYRLAGLKA 54
M+ EC + + KA G++ L+ + R+ +RA +L D S AER K
Sbjct: 1 MRAECREQVAKALGKKRLNAADSNRISSLYIRAQNTLARTDPDWMFKSPAERAEAIAQKT 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKL-FFKAGSAEVPLE 113
D ++ ++ + +A + QL++++ QAL K+ +F S +E
Sbjct: 61 ASDLAVQIAKNNQNIARDAVIKAQLQTEI--YNHPKLNPVQALMRKIAYFSDQSGIQSIE 118
Query: 114 MKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
+ +A ++ +S + + G +++K D+ M G K+ N + + + K+
Sbjct: 119 KQSQALHSRWMSLVADVFTKTQERFGMSVNKAMTDDIIRVMFGGKSDNPEITAMAKEVSA 178
Query: 174 TQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGT 232
E+ + AG + K +N K+ T + ++V LD LD ++Y G
Sbjct: 179 ALEEMRLAFNRAGGNIKKLDNFGFMTSHDQKKVALTNQAEWVNDALDGLDRNQYVKDTGE 238
Query: 233 PLSRSEIASFVGEVFAERVRSTSFKD-------------PSIPSSEVGVKREFERVFHFK 279
+ E+ S + +++ + + KD P S++ + + R HFK
Sbjct: 239 LMDELELKSMLEDIYKTISTNGANKDLLVLNKQAKAGVSPVGGRSKMANRHQEARALHFK 298
Query: 280 DSQAHMDYMEHFGV--STNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAND 337
D A + Y + +G + IL + +S ++ + + LG N + ++ +
Sbjct: 299 DGDAWLAYQKKYGTYDEAGFHEILKNHTQRMSTEVAMMQNLGSNPRHTFESLLDE----- 353
Query: 338 QEASAGNKVLKDWL-GRNKLEVRQEA--MLQMWEVMRYGETVENTGWANWMAGLRSAAGA 394
A K+ D L G E+ ++A L M+ + ++ N M GLR+ A
Sbjct: 354 ----AKIKLKADPLNGLKHGEIDKQAHRALSMYNTLDANTRAIDSTLGNVMGGLRALMVA 409
Query: 395 SMLG 398
S LG
Sbjct: 410 SKLG 413
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 705 ATMALAGIGVASIKALLRGEDPSLPEVI--YDGTLANGALLPYM-DRLTKLVSKGDRAAI 761
A LAG + + L G++P I + +L G L ++ D ++ L R+A
Sbjct: 688 AYQTLAGALIVQTQNLANGKNPEPVFTIDFFGKSLLKGGGLSFLGDIMSALSDPTGRSAS 747
Query: 762 ----GGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHL 817
G LLG + LT + + ++ +P N+WY K D +
Sbjct: 748 DFISGPLLGQSMKLGMLLTGMGNNIIEGKESTRMMEVANTLKSNIPLQNLWYSKLVVDRM 807
Query: 818 ILNQILEELNPGYLDRQQSKKKKKGIELFQNMDE 851
+ +++ ++P YL R Q + + G + ++ E
Sbjct: 808 LYSKMQNMIDPDYLPRTQQRLENLGNSYWWDLSE 841
>gi|48697207|ref|YP_024937.1| hypothetical protein BcepC6B_gp17 [Burkholderia phage BcepC6B]
gi|47779013|gb|AAT38376.1| gp17 [Burkholderia phage BcepC6B]
Length = 864
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 156/396 (39%), Gaps = 74/396 (18%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGI---VRAYVSLDGKG---LSKAERYRLAGLKA 54
M +C+ + AAGR+L++ E+ +E+ + +R+ D G +S+A+R
Sbjct: 1 MHQKCVNAVETAAGRKLTQAEIDGIENRVRAGMRSTARQDPAGWSAMSQADRV----AAG 56
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDL---DRVQAGVYGKSQALFNK----------- 100
E +++L+ + +D A K+ Q+ + DR+Q +Y + K
Sbjct: 57 AEWARQQLVHEAD--LDRARKQLQIAKQIETTDRIQEALYADPENAHRKRARETIVKHDI 114
Query: 101 --LFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLD---KQFGLDVFDEM- 154
+ AG+ IK+ + + +VG L D D+ E+
Sbjct: 115 EQTYVTAGA--------IKSDYMRQTMGAIDAMKVGQNFLARAFDVDNPAMERDIIREVY 166
Query: 155 KGK--KTQNEQASRLVKQYFETQRELHSQAHEAG-----LDYKFFENRIPQPMSVDKLRA 207
+G T NE A +Q +T + + + AG LDY + R Q +
Sbjct: 167 RGADGSTGNEVAKAAAEQIGKTTGAMRERFNRAGGNVGELDYGYVPIRHAQSKVLGNGSD 226
Query: 208 TKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIAS-FVGEVFAERVRSTSFKDPSIPSSEV 266
++ + +++ LD S+Y D G PL+ +E+ VGE R+ + ++ +
Sbjct: 227 AQRHAWADAVMPLLDRSQYLDDAGNPLNDAELRKVLVGEDREAWERANAAARGNVAPRKQ 286
Query: 267 GVKREF-------------------------ERVFHFKDSQAHMDYMEHFGVSTNVNTIL 301
GV RV HF+D+ AHM Y FG + +N L
Sbjct: 287 GVWDTIAYGGVNKIVPGETSGGAARANAGSAHRVLHFRDADAHMQYNRQFGEGSLLNA-L 345
Query: 302 TSELASLSKDIVIARELGPNADSFVKQMIVQTIAND 337
+ ++K+I + GPN +K + T +D
Sbjct: 346 VDHVGGMAKNIALVERYGPNPTRNMKTQMQLTAVHD 381
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 26/228 (11%)
Query: 655 GTRAGEALRMFQQFTTTPTGM----FLNILDLSNSAKMPKGASMALNHVWIQYSATMALA 710
GT GE + F QF + P M + I D+ S + AL + + Y+A + ++
Sbjct: 630 GTVTGELKKSFMQFKSFPMAMISRHWGRIGDMRRSGDFRVDGAPALANP-MAYAAALVVS 688
Query: 711 G--IGVASIKA--LLRGEDPS--LPEVIYDG-------TLANGALLPYMDRLTKLVSKGD 757
IG S +A LL G+DP +V + G ++ GA D L D
Sbjct: 689 TTLIGAISTQAKNLLAGKDPEPMFDDVKHAGGFWTRAFSVGGGAGFA-GDMLVAAFQSAD 747
Query: 758 R-----AAIGG-LLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLK 811
+AIGG LL + + ++S+ + A + + + K + P +N+W+ K
Sbjct: 748 YGSLLGSAIGGPLLSTLFQPLRAVSSNVQDAAQGKDTHIGADLLKIAQSNTPLVNLWFWK 807
Query: 812 NSFDHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
++ LI + + E L+PG R ++ + + + F + G P R P
Sbjct: 808 TVWNRLIWDNLAENLSPGVTQRNMNRSRTQYHNDYFWSPGTGSPQRSP 855
>gi|48696687|ref|YP_024981.1| hypothetical protein VP5_gp18 [Vibrio phage VP5]
gi|40806150|gb|AAR92068.1| hypothetical protein [Vibrio phage VP5]
Length = 782
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 653 KRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGI 712
K G GE R F + P +N + K GA ++ I AT L G+
Sbjct: 566 KSGNFGGELHRSLFMFHSFPITTIMNQWRRVFTGKGYSGAFDRMSAAAIMVGATSVL-GV 624
Query: 713 GVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLVSKG---DRAAIGGLLG 766
G+ K +L G+ P S P++ +G +A G Y+ L + + G D + G G
Sbjct: 625 GIIQAKDILNGKKPRSMSDPKLWIEG-MAQGGSFNYIGDLMRNAASGYSHDMTSYVG--G 681
Query: 767 PVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEEL 826
PV + + +A ++A D E++ + +PF N+WY K + D L++++I
Sbjct: 682 PVLAYGDWVAMTAADMAKGDAESAMARTANFATQQIPFNNLWYTKIATDRLLMDRIRRLS 741
Query: 827 NPGYLDRQQSKKKK 840
+P Y +Q +K +K
Sbjct: 742 DPEYDKKQLNKMRK 755
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 33/292 (11%)
Query: 130 YAEVGSKNLGFTLDKQFGLDVF-DEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLD 188
+A + + T +Q LD F E+ G++T N A + K + + +L+++ +AG
Sbjct: 116 FAGIATGERRLTKSQQRLLDDFVHELYGRQTGNADALKAAKGWKKATEDLNARFGQAGGH 175
Query: 189 YKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLD-------LSRYKDIDGTPLSRSEIA 240
++ R+PQ + + D +V + D +D L + KD D R +
Sbjct: 176 MAELDDWRLPQKHNRMAISKAGADVWVEKVWDLIDRDKMVKKLRKGKDEDNL---REALY 232
Query: 241 SFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI 300
S + + + S+ ++ + R ER FKDS + + Y FG TNV
Sbjct: 233 SVYNNIVTDGMSSSK----TLSKKFTDMMRS-ERFITFKDSDSWLKYQREFG-DTNVYAS 286
Query: 301 LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ 360
+ + ++S+ I + GP+ D + T+ + G + R ++
Sbjct: 287 MLGHIDNMSRAIGMMETFGPDPD-----IGFNTLERAVKTKKGLTSRQPTGARPTFDM-- 339
Query: 361 EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFIS 412
+M Y E T W N +AGLR+ AS LG + AL + + S
Sbjct: 340 --------LMGYNMVEEQTVWGNRVAGLRNLWTASKLGAAVVSALTDSVYAS 383
>gi|48696644|ref|YP_024423.1| hypothetical protein VP2p19 [Vibrio phage VP2]
gi|40950042|gb|AAR97633.1| hypothetical protein [Vibrio phage VP2]
Length = 782
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 653 KRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGI 712
K G GE R F + P +N + K GA ++ I AT L G+
Sbjct: 566 KSGNFGGELHRSLFMFHSFPITTIMNQWRRVFTGKGYSGAFDRMSAAAIMVGATSVL-GV 624
Query: 713 GVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLVSKG---DRAAIGGLLG 766
G+ K +L G+ P S P++ +G +A G Y+ L + + G D + G G
Sbjct: 625 GIIQAKDILNGKKPRSMSDPKLWIEG-MAQGGSFNYIGDLMRNAASGYSHDMTSYVG--G 681
Query: 767 PVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEEL 826
PV + + +A ++A D E++ + +PF N+WY K + D L++++I
Sbjct: 682 PVLAYGDWVAMTAADMAKGDAESAMARTANFATQQIPFNNLWYTKIATDRLLMDRIRRLS 741
Query: 827 NPGYLDRQQSKKKK 840
+P Y +Q +K +K
Sbjct: 742 DPEYDKKQLNKMRK 755
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 33/292 (11%)
Query: 130 YAEVGSKNLGFTLDKQFGLDVF-DEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLD 188
+A + + T +Q LD F E+ G++T N A + K + + +L+++ +AG
Sbjct: 116 FAGIATGERRLTKSQQRLLDDFVHELYGRQTGNADALKAAKGWKKATEDLNARFGQAGGH 175
Query: 189 YKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLD-------LSRYKDIDGTPLSRSEIA 240
++ R+PQ + + D +V + D +D L + KD D R +
Sbjct: 176 MAELDDWRLPQKHNRMAISKAGADVWVEKVWDLIDRDKMVKKLRKGKDEDNL---REALY 232
Query: 241 SFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI 300
S + + + S+ ++ + R ER FKDS + + Y FG TNV
Sbjct: 233 SVYNNIVTDGMSSSK----TLSKKFTDMMRS-ERFITFKDSDSWLKYQREFG-DTNVYAS 286
Query: 301 LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ 360
+ + ++S+ I + GP+ D + T+ + G + R ++
Sbjct: 287 MLGHIDNMSRAIGMMETFGPDPD-----IGFNTLERAVKTKKGLTSRQPTGARPTFDM-- 339
Query: 361 EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFIS 412
+M Y E T W N +AGLR+ AS LG + AL + + S
Sbjct: 340 --------LMGYNMVEEQTVWGNRVAGLRNLWTASKLGAAVVSALTDSVYAS 383
>gi|167032768|ref|YP_001667999.1| hypothetical protein PputGB1_1760 [Pseudomonas putida GB-1]
gi|166859256|gb|ABY97663.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 855
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 158/743 (21%), Positives = 294/743 (39%), Gaps = 144/743 (19%)
Query: 165 SRLVKQYFETQRELHSQAHEAGLDYKFFENRIP-QPMSVDKLRATKKDDFVRSMLDWLDL 223
++++++Y E R A+ AG I Q +K+ A + + +L LD
Sbjct: 180 AKIIQKYQEGAR---IDANRAGASIGKLPGYIARQSHDSEKMGAAGFERWAEEILPRLDT 236
Query: 224 SRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREF--ERVFHFKDS 281
+ +++ G P+ + + G V + ++S + + P+ + ++ ERV HFKD
Sbjct: 237 ATFRE-GGDPMVFLK-GVYDGLVSGDHLKSPAGQQPNGFRGPANLAKKLSQERVLHFKDG 294
Query: 282 QAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEAS 341
A +Y + FG N+ + L ++ + R LG N ++ + M + I D A
Sbjct: 295 VAWHEYNQLFGTG-NLREAVLRGLDLSGQNTALMRRLGTNPEANLN-MAMDVIKEDVRAG 352
Query: 342 A----------------GNKVLKDWLGR-----NKLEVRQEAMLQMWEVMRYGETVENTG 380
GN+ LK+ G+ N + R A ++ W+ ++ G
Sbjct: 353 GDPAALANFNTARRGVIGNR-LKEVSGQTRIPGNATQARVAANVRAWQ------SLSKLG 405
Query: 381 WANWMAGLRSAAGASML---GQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKER 437
A + AS + GQ +G+L E G G+ K E+
Sbjct: 406 GALLSSFTDLPVAASEMRYQGQSFLGSLAEMG---------AGLMK-------GRGSAEQ 449
Query: 438 MELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKW---SG-AEYLDKKRISSHA 493
++LS G+YA+ + G M S +G K+ M ++ +G + + D + S+
Sbjct: 450 RQILSAYGVYADSM--RGEIMRRFSADDSVGGKMSRGMSQFFRLNGLSWWTDANKASAGL 507
Query: 494 LIVYNQIGRMTDTYASLK-DLKADPRLDPSIKAF-FKQLDDTDFTVIKRAKAMSSPDGYL 551
++ +N + SL D K +A LD + +++ + DG
Sbjct: 508 MMAHNLAQNKGKAWGSLNGDFK---------RALGLYDLDAGKWELLREMDTRMA-DGRD 557
Query: 552 YARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEIN 611
Y TP I + D R+ +A + PE +++ DLER
Sbjct: 558 YM-TPDGIAGISDE------RIGQYLAERNR---------PESAGAIRETRQDLERSLRA 601
Query: 612 ILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTT- 670
+ D+V+ +A++ + +T R M+ + GT G+ LR QF +
Sbjct: 602 YVNDRVT---YAVLEPDART--RSIMNQGT-----------QPGTVPGDLLRFVTQFKSF 645
Query: 671 ------------------TPTGM---FLNILDLSNSAKMPKGASMALNHVWIQYSATMAL 709
TPT + F DL + + G +AL + + T A
Sbjct: 646 PAAYMQKTLGRELYGRGYTPTALGNSFRGGRDLVQALRNGNGERLALAQLMLW---TTAF 702
Query: 710 AGIGVASIKALLRGEDPSL---PEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLG 766
+ +AS K + +G +P P+ + G L + D L ++ +A+ G
Sbjct: 703 GYLSMAS-KDVTKGREPRPADDPKTWLAAMVQGGGLGIFGDYLFGEANRFGNSALESAAG 761
Query: 767 PV---PSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQIL 823
P + V NL + A K+ +++ +A + + PFMN++Y + + DHL L +
Sbjct: 762 PTIGTAADVINLWARA-----KEGDDTASSALRLAQNNTPFMNLFYTRIALDHLFLYSVQ 816
Query: 824 EELNPGYLDRQQSKKKKKGIELF 846
E +NPG L R + + +++ + F
Sbjct: 817 EAMNPGSLRRTEERIRQQNGQEF 839
>gi|288959378|ref|YP_003449719.1| hypothetical protein AZL_025370 [Azospirillum sp. B510]
gi|288911686|dbj|BAI73175.1| hypothetical protein AZL_025370 [Azospirillum sp. B510]
Length = 995
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 653 KRGTRAG----EALRMFQQFTTTPTGMFLNIL--DLSNSAKMPKGASMALNHVWIQYSAT 706
+RGT+AG EALR QF P + + DL + G + + H + +
Sbjct: 778 RRGTQAGTLEGEALRFVGQFKAFPVAVISKVWGRDLYGGER-GWGRAAGIVHTLVATTVM 836
Query: 707 MALAGIGVASIKALLRGE---DPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGG 763
+AG+ +K L +G DP+ P L G Y D L S+ +
Sbjct: 837 GYVAGM----LKDLSKGRAPRDPTDPRAWGAAFLQGGGAGIYGDFLLGQYSRFGNRFLES 892
Query: 764 LLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQIL 823
GP S L + + ++ + K + PF+N++Y + + D+L L Q+
Sbjct: 893 AAGPTLSSAGELLN--IWAGAREGNDEKAATLRWTLSNTPFVNLFYTRMALDYLFLYQVQ 950
Query: 824 EELNPGYLDRQQSKKKKKGIELF 846
E +NPG+L R + + K + F
Sbjct: 951 EAMNPGFLRRFEQRVAKDNNQRF 973
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 255 SFKDPSIPSSEVGVKREFE-RVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIV 313
FKDP+ S KR + RV H++D+ A MDY FG V +L L +++
Sbjct: 273 GFKDPAFKGSGNIAKRLSQGRVLHWRDADAWMDYQAAFGHGNLVEAVLRG-LDQAARNTA 331
Query: 314 IARELGPNA----DSFVKQMIVQTIANDQEASAGNKVLKDWLGR-------------NKL 356
+ RE G N D+ ++ + D +A + WL N+L
Sbjct: 332 LMREFGTNPRGEFDADMQALAESWRDRDPDAVVKLGEARKWLANRFDELDGTSSMPVNRL 391
Query: 357 EVRQEAMLQMWEVM 370
R A ++ WE M
Sbjct: 392 GARIGASVRAWESM 405
>gi|221213942|ref|ZP_03586915.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221166119|gb|EED98592.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 864
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 32/231 (13%)
Query: 655 GTRAGEALRMFQQFTTTPTGM----FLNILDLSNSAKMPKGASMALNHVWIQYSATMALA 710
GT GE + F QF + P M + I D+ S + AL + + Y+A + ++
Sbjct: 630 GTAMGELKKTFMQFKSFPIAMISRHWGRIGDMRRSGDFRVDGAPALANP-MAYAAALVVS 688
Query: 711 G--IGVAS--IKALLRGEDPSLPEVIYDG------------TLANGALLPYMDRLTKLVS 754
IG S +K LL G+DP E ++D ++ GA D LT
Sbjct: 689 TTLIGAISTQVKNLLAGKDP---EPMFDDVKHAAGFWTRAFSVGGGAGFA-GDMLTASFE 744
Query: 755 KGDRAAIGGLL--GPVPS----MVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMW 808
D ++ G + GP+PS +V +S+A + A + + + K + P +N+W
Sbjct: 745 STDYGSLLGSVVGGPLPSTIYQVVRAFSSNAQDAAQGKDTHVSADLLKVAQSNTPLVNLW 804
Query: 809 YLKNSFDHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
+ K ++ LI + + E L+PG R ++ + + + F + G P R P
Sbjct: 805 FWKTVWNRLIWDNLAENLSPGVTQRNINRSRNQYHNDYFWSPGTGSPQRAP 855
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 151/390 (38%), Gaps = 62/390 (15%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGI---VRAYVSLDGKG---LSKAERYRLAGLKA 54
M +C+ + AAGR+L++ E+ +E+ + +RA D G +S+A+R A
Sbjct: 1 MHQKCVNAVEAAAGRKLTQAEIDGIENRVRAGMRATARQDPVGWSAMSQADRVAAGAEWA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDL---DRVQAGVYGKSQALFNK----------- 100
+ + E +D A K+ Q+ + DR+Q +Y + K
Sbjct: 61 RKQLEHEA------DLDRARKQLQIAKQIETTDRIQEALYADPENAHRKRARETIVKQDI 114
Query: 101 --LFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKK 158
+ AG+ + + A + + N A + +++ +V+ G
Sbjct: 115 EQTYVLAGAIKSDYMRQTMGAIDAMKAGQNFLARAFDVD-NPAMERDIIREVYHGADGS- 172
Query: 159 TQNEQASRLVKQYFETQRELHSQAHEAG-----LDYKFFENRIPQPMSVDKLRATKKDDF 213
T NE A +Q +T + + + AG LDY + R Q + + +
Sbjct: 173 TGNEVAKAAAEQISKTTAAMRERFNRAGGNVGELDYGYVPIRHSQSKVLGNGSDAARHAW 232
Query: 214 VRSMLDWLDLSRYKDIDGTPLSRSEIAS-FVGEVFAERVRSTSFKDPSIPSSEVGVKREF 272
+++ LD S+Y D G PL+ +++ VGE R+ + +I + GV
Sbjct: 233 ADAVMPLLDRSQYLDDAGNPLNDADLRKMLVGEDREPWERANAAARGNIAPRKQGVWDTI 292
Query: 273 -------------------------ERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELAS 307
RV HF+D+ AH+ Y +G + +N L +
Sbjct: 293 AYGGVNKIVPGETTGSAARANAGSAHRVLHFRDADAHIQYNRQYGEGSLLNA-LVDHVGG 351
Query: 308 LSKDIVIARELGPNADSFVKQMIVQTIAND 337
++K+I + GPN +K + T +D
Sbjct: 352 MAKNIALVERYGPNPTRNMKTQMQLTAVHD 381
>gi|320175029|gb|EFW50142.1| 17 [Shigella dysenteriae CDC 74-1112]
Length = 582
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 759 AAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
A+ + GPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 481 GALASMFGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAAL 540
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKK 841
DH+I NQ+ E +PGYL + + + KK+
Sbjct: 541 DHMIFNQMQEYFSPGYLRKMEQRSKKE 567
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 234 LSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEVGVKR-EFERVFHFKDSQAHMDYMEH 290
++ +E+++F+GE + D + S R R HFKD+ +++ Y +
Sbjct: 1 MNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQYQQL 60
Query: 291 FGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEAS 341
+G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 61 YG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATAN 110
>gi|262043551|ref|ZP_06016664.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039085|gb|EEW40243.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 708
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 174/746 (23%), Positives = 301/746 (40%), Gaps = 98/746 (13%)
Query: 4 ECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRL--AGLKAEEDFQK- 60
+C +N AAGR+LS+ E+ L VR + L+ E L A L+A ++
Sbjct: 8 QCEIAVNTAAGRKLSEDEMESL----VRDMNDTTNRILAGNEALTLEEAALRAAQELGNR 63
Query: 61 ----ELIRSVNDAIDEAYKRHQL----RSDLDR----VQAGVYGKSQALFNKLFFKAGSA 108
++I + N AI+ +L R+ DR ++A + G++ A ++ S+
Sbjct: 64 DQLAKVIEARNKAINTRIAAQRLGELRRTWKDRPDIGLEAMLVGRNDARTGSR--RSVSS 121
Query: 109 EVP-LEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKT-----QNE 162
EV L K A + F++ V G + D++ ++ +G+KT Q+
Sbjct: 122 EVAQLRGKYHAG---INYDFDQAGLVKFIASG-SNDREIADAMWRIGRGQKTDGMTPQSV 177
Query: 163 QASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLD 222
A++++ ++ ET R ++A K + Q + K+RA + + ++L LD
Sbjct: 178 SAAKIIMKWQETARVDENRA--GAWIGKMPGYIVRQSHDILKIRAAGYESWRNAILPRLD 235
Query: 223 LSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDP---SIPSSEVGVKREF-ERVFHF 278
+ + I R V + A V TS K S VKR ERV HF
Sbjct: 236 DATFDGIS----DREGFLRGVYDGLASGVHLTSEKPDWMNGFKGSANAVKRASQERVLHF 291
Query: 279 KDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQ 338
KD +Y E FG + + L S ++ I R LG N + K + TIA D
Sbjct: 292 KDGVNWHEYNEQFGTGSLREAVFGG-LNSAARTTGIMRVLGTNPQNMFK-YLTDTIAKDV 349
Query: 339 EASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLG 398
+ L D++ +VR+ M +V + GWAN A +R S LG
Sbjct: 350 SKQSNPAALADFM----TKVRRLNRTVMPQVDGSLNIPGSVGWANASANVRGWLRMSQLG 405
Query: 399 QHPIGALLEDGFISRQMLSRVGIDKEAIQ-----RINKMPLKERMELLSDVGLYAEGVVA 453
I + + + +M + +A+ R ++ E+ E+LS +G+Y++ +
Sbjct: 406 GAVISSFNDVPISATEMRYQGQNFMQALTGAMKGRFSRYTSDEQKEILSSIGVYSDTMTQ 465
Query: 454 HGRNMMEGSDAF--QIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLK 511
M G+D+ ++G + K++ + + +S+A+++ N + + D
Sbjct: 466 EIIRRMSGNDSMSGKMG-RAQQLFFKYNLMNFWTESGRNSNAMMITNWLAKNADQ--QFT 522
Query: 512 DLKADPR--LDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRD 569
L D R LD + D ++ I R M+ +G + T S I+ + D + D
Sbjct: 523 ALPEDLRRVLD------LHGIGDAEWN-IYRNMDMADSEGRKFM-TTSGIRAVPDEVIGD 574
Query: 570 LARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALV-LDN 628
K LK ++ + R+ L+ QL +NI + ++ A + +
Sbjct: 575 YV--------ASKGLKVTERSIADARETLESQLRGYILDRLNIAMSEPGDRTQAFMKMGT 626
Query: 629 VQTSVRGAM---------HTSLFDRQRLGLLTYKRG-TRAGEALRMFQQFTTTPTGMFLN 678
V +V G T+ F + LG + RG T AG + TG N
Sbjct: 627 VPGTVAGEAVRFAGQYKSFTASFMQNVLGREVFGRGYTPAG--------LGESKTGSLTN 678
Query: 679 ILDLSNSAKMPKGASMAL---NHVWI 701
L L N G ++ NHVWI
Sbjct: 679 AL-LRNGKGAFLGGCKSVRMGNHVWI 703
>gi|262043648|ref|ZP_06016757.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038986|gb|EEW40148.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 974
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 126/627 (20%), Positives = 235/627 (37%), Gaps = 98/627 (15%)
Query: 254 TSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIV 313
T FK S + V + ERV HFKD + Y + FGV N+ + S L ++
Sbjct: 391 TGFKGGS---TNVARRASQERVLHFKDGLSWYRYNDKFGVG-NLREAVGSGLIHSAETTG 446
Query: 314 IARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAML--QMWEVMR 371
+ R +G N ++ ++ I +A+ + L NK ++ L Q+ E+
Sbjct: 447 LMRRMGTNPENMFNEL-ADRIEQRYKAAKDDNAL------NKFRQKRNTSLTSQLKEITG 499
Query: 372 YGETVENTGWANWMAGLRSAAGASMLGQHPIGAL-------LEDGFISRQMLSRVGIDKE 424
N A A R+ LG I + +E + R ML V
Sbjct: 500 QTNIPGNAALARVAATTRAIETMMKLGGSMISSFNDIATQAMEMRYQGRNMLGSVWEATA 559
Query: 425 AIQRINKMPLKERMELLSDVGLYAEGVVAH------GRNMMEGSDAFQIGHKLHSKMHKW 478
++ + ER ++L +GL+A+ + N M G + + + W
Sbjct: 560 NKVQLTRWKNAERQQVLKSIGLHADAMKDELIYRFSADNSMPGRVNRAMRNYFRLNLQSW 619
Query: 479 SGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVI 538
+ + R S+ ++V +G T S D+ + R S+ +++ ++ +
Sbjct: 620 ----WTNSSRYST-GMMVSEWLG--THAGKSFGDVPEELRRVLSMHG----IEENEWAAL 668
Query: 539 KRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQEL 598
+ K + + DG Y TP + ++ D+ + L
Sbjct: 669 SKMK-LHAADGNAYM-TPDGVADIPRTDIENY---------------------------L 699
Query: 599 QQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLT--YKRGT 656
+ + + + ++ +S+K+ +LD V ++ D + + ++ +RGT
Sbjct: 700 TNRGIKINDRSVEYARELLSDKVRGYILDRVGVALNEP------DARTMSIMKQGMQRGT 753
Query: 657 RAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAG----- 711
GE LR QF + N + + S++ N+ + + A+
Sbjct: 754 AYGEMLRFAWQFKSFTASFMQNAIGRELYGRGYDFGSLSQNNTFRNNALIRAMRNGNGEL 813
Query: 712 IGVASI--------------KALLRGEDPSLPEVIYDGTLA---NGALLPYMDRLTKLVS 754
+G+A + K +LRG+ P + + T A G L D L +
Sbjct: 814 MGIAQLFLWATAFGYLSMQTKLMLRGQTPRPADNVSTWTAAMAQGGGLGILGDFLFGEYN 873
Query: 755 KGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
+ L GP S L + L + + + AI T P+MN+ ++
Sbjct: 874 RFGNTPATSLAGPFASDAAQLVN-LFGLTKQGDAKAADYFNFAINHT-PYMNLHVVRPVM 931
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKK 841
D LILNQ+ E ++PG L R Q + K++
Sbjct: 932 DFLILNQMREWMSPGSLQRYQQRVKEE 958
>gi|291336673|gb|ADD96216.1| hypothetical protein [uncultured organism MedDCM-OCT-S06-C2377]
Length = 101
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 737 LANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVN--A 794
L G L Y D L + + +A+ +GP+P+ + S A+ A K E K A
Sbjct: 2 LQGGGLGIYTDFLFGNI-QNSTSALATAVGPIPTEAARVLS-ALNYAIK-GEGGKAGKQA 58
Query: 795 TKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYL 831
+I++ +PF+N++Y+K +FD++I Q++E L+PG L
Sbjct: 59 YYSIKENIPFLNLFYIKTAFDYMIGYQMMETLSPGSL 95
>gi|157372110|ref|YP_001480099.1| hypothetical protein Spro_3875 [Serratia proteamaculans 568]
gi|157323874|gb|ABV42971.1| hypothetical protein Spro_3875 [Serratia proteamaculans 568]
Length = 850
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 130/622 (20%), Positives = 233/622 (37%), Gaps = 130/622 (20%)
Query: 273 ERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQ 332
ERV HFKD A +Y + +GV N+ + S L S ++ + R LG N ++ +
Sbjct: 290 ERVLHFKDGVAWHEYNKAYGVG-NLRESVMSGLTSSARTTGVMRVLGTNPENMFGHLFET 348
Query: 333 TIA-----NDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAG 387
A N+ A A D+ GR R+ ++ E++ Y N+ A A
Sbjct: 349 QQARLKKLNNPAAEA------DFAGR-----RRALENELSEILGYNSIPANSAIARAGAT 397
Query: 388 LRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLY 447
+R+ G + LG GA++ +DVG
Sbjct: 398 IRAVEGMTKLG----GAVISS--------------------------------FNDVGNA 421
Query: 448 AEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQI-GRMTDT 506
A + G N+M+ +G + K+ +S A D+K I + I + + M
Sbjct: 422 AMELRYQGMNLMDA-----MGKSIAGKLKGYSAA---DQKEILGYMGIFTDSVRDEMIAK 473
Query: 507 YASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDAD 566
++ D R+ + FFK L+ ++ K+M AR + + + D
Sbjct: 474 FSG--DTSVPGRISRLQRTFFK-LNLLNWWTENSRKSMGLVMSNWMARNSKSAWSSMNED 530
Query: 567 LRDLARMS---------------DKIAYHRKKLKNSKTLSPEQR--QELQQQLADLERKE 609
LR + S D + ++ N P++R + + + +
Sbjct: 531 LRRVLNSSGITEREWNLYRGMEMDSVRGNQHMTPNGVKYIPDERIAEYVAADGLQVNKAS 590
Query: 610 INILKDKVSNKMHALVLDNVQTSVR--GAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQ 667
I ++ + K+ LD V ++ GA ++ + + GT GEA+R Q
Sbjct: 591 IAAARESLEGKLRGYYLDRVLIAMSEPGARTRAMMKQ------GTQPGTPLGEAIRFGGQ 644
Query: 668 FTTTPTGMFLN---------------------ILDLSNSAKMPKGASMALNHVWIQYSAT 706
F + TG F+ L+N+ + G M L ++I +A
Sbjct: 645 FKSF-TGSFMQNTIGREIYGRGYTPAELGQSRFTSLANAMRNGNGEKMGLAQLFIWMTA- 702
Query: 707 MALAGIGVASI--KALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGG- 763
+G S+ K LL+G+ P + T A + G+ GG
Sbjct: 703 -----LGYVSMQTKLLLKGQTPRPADAK---TFLAAAAQGGGLGIMGDFLFGEYNRFGGG 754
Query: 764 ----LLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLIL 819
L GP + + + + L +D + + K PFMN+ ++ + ++LIL
Sbjct: 755 LASSLAGPTVGDLDQIRN--LFLRARDGDAKAADLLKFGIDHTPFMNLHVVRPAMNYLIL 812
Query: 820 NQILEELNPGYLDRQQSKKKKK 841
N+ E L+PG L+R + + +K+
Sbjct: 813 NRAQEWLSPGSLERYRQRVEKE 834
>gi|221201510|ref|ZP_03574549.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221207934|ref|ZP_03580940.1| hypothetical protein BURMUCGD2_2469 [Burkholderia multivorans CGD2]
gi|221172119|gb|EEE04560.1| hypothetical protein BURMUCGD2_2469 [Burkholderia multivorans CGD2]
gi|221178778|gb|EEE11186.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 869
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 153/391 (39%), Gaps = 64/391 (16%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGI---VRAYVSLD---GKGLSKAERYRLAGLKA 54
M +C+ + AAGR+L++ E+ +E+ + +RA D +S+A+R
Sbjct: 1 MHQKCVNAVEAAAGRKLTQAEIDGIENRVRAGMRAKARQDPLAWSAMSQADRV----AAG 56
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDL---DRVQAGVYGKSQALFNKLFFKAGSAEVP 111
E +++L+ +D K+ Q+ + DR+Q +Y + K +A V
Sbjct: 57 AEWARQQLVHEAE--LDRMRKQLQIAKQIETTDRIQEALYADPENAHRK---RARETIVK 111
Query: 112 LEMK--------IKAAETKVLSKFNEYAEVGSKNLGFTLD---KQFGLDVFDEM-KGK-- 157
+++ IK+ + E + G L D D+ E+ +G
Sbjct: 112 HDIEQTYVLAGAIKSDYMRQTMGAIEAMKAGQNFLARAFDVDNPAMERDIIREVYRGADG 171
Query: 158 KTQNEQASRLVKQYFETQRELHSQAHEAG-----LDYKFFENRIPQPMSVDKLRATKKDD 212
T NE A +Q +T + + + AG LDY + R Q + +
Sbjct: 172 STGNEVAKAAAEQISKTTAAMRERFNRAGGNVGELDYGYVPIRHSQSKVLGNGSDAARHA 231
Query: 213 FVRSMLDWLDLSRYKDIDGTPLSRSEIAS-FVGEVFAERVRSTSFKDPSIPSSEVGVKRE 271
+ +++ LD S+Y D G PL+ ++ VGE R+ + +I + GV
Sbjct: 232 WADAVMPLLDRSQYLDDAGNPLNDVDLRKMLVGEDREPWERANAAARGNIAPRKQGVWDT 291
Query: 272 F-------------------------ERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELA 306
RV HF+D+ AH+ Y +G + +N ++ +
Sbjct: 292 IAYGGINKIVPGETTGSAARANAGSAHRVLHFRDADAHIQYNRQYGEGSLLNALI-DHVG 350
Query: 307 SLSKDIVIARELGPNADSFVKQMIVQTIAND 337
++K+I + GPN +K + T +D
Sbjct: 351 GMAKNIALVERYGPNPTRNMKTQMQLTAVHD 381
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 655 GTRAGEALRMFQQFTTTPTGM----FLNILDLSNSAK-----MPKGASMALNHVWIQYSA 705
GT GE + F QF + P M + I ++ S P+ + L + + Y+A
Sbjct: 630 GTVTGELKKSFMQFKSFPMAMISRHWGRIGNMRRSGDYLVEGAPRAFGIPLANP-MAYAA 688
Query: 706 TMALAG--IGVASIKA--LLRGEDPSLPEVIYDGTLANGALLPYMDRLTK--------LV 753
+ ++ IG S +A LL G+DP E ++D G + LV
Sbjct: 689 ALVVSTTLIGAISTQAKNLLAGKDP---EPMFDDVKHAGGFWTRAFSVGGGAGFAGDMLV 745
Query: 754 SKGDRAAIGGLLGPV---PSMVT------NLTSSAVELATKDNENSKVNATKAIRKTLPF 804
+ + A G LLG P + T ++S+ + A + + + K + P
Sbjct: 746 AAFESADYGSLLGSAVGGPLLSTLFQPLRAISSNVQDAAQGKDTHVGADLLKIAQSNTPL 805
Query: 805 MNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
+N+W+ K ++ LI + + E L+PG R ++ + + E F + G P R P
Sbjct: 806 VNLWFWKTVWNRLIWDNLAENLSPGVTQRNMNRSRTQYHNEYFWSPGTGAPQRAP 860
>gi|254251753|ref|ZP_04945071.1| hypothetical protein BDAG_00950 [Burkholderia dolosa AUO158]
gi|124894362|gb|EAY68242.1| hypothetical protein BDAG_00950 [Burkholderia dolosa AUO158]
Length = 865
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 34/232 (14%)
Query: 655 GTRAGEALRMFQQFTTTPTGM----FLNILDLSNSAKMPKGASMALNHVWIQYSATM--- 707
GT GE + F QF + P M + I ++ S + L + Y A +
Sbjct: 631 GTLQGELQKTFLQFKSFPIAMISRHWGRIGEMRRSGDFRVEGAPTLASP-MAYGAALVVS 689
Query: 708 -ALAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTK--------------L 752
L G ++ LL G+DP E + D GA + TK L
Sbjct: 690 TTLLGALAVQLQNLLLGKDP---EPMGDDVKHGGAF--WFRAFTKGGGAGFAGDMLSAML 744
Query: 753 VSKGDRAAIGGLLG-PVPSM----VTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNM 807
K A+G + G P+ S VT +++A+ A + + + K + +P +N+
Sbjct: 745 TGKNPAEAVGSVFGGPLVSTAIQAVTPFSNNAMAAAEGKDTHLSADLLKFAQSNMPIVNL 804
Query: 808 WYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
WY K ++ LI + I E L+PG R +K +++ + F P R P
Sbjct: 805 WYWKTVWNRLIWDNIAENLSPGVTSRNVAKSRQQYHNDYFWEPGTSAPQRAP 856
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 137/360 (38%), Gaps = 59/360 (16%)
Query: 14 GRELSKKELRRLEDGI---VRAYVSLD---GKGLSKAERYRLAGLKAEEDFQKELIRSVN 67
GR+L K EL +E+ + +RA D + +++AER + A + + E
Sbjct: 14 GRDLKKAELDGIENRVRAGMRAVARQDPAAWRSMTEAERVQAGAEWARQQLEAEA----- 68
Query: 68 DAIDEAYKRHQLRSDL---DRVQAGVYGKSQALFNKLFF-KAGSAEVP----LEMKIKAA 119
+D+A K+ Q+ + DR+Q ++ + + K KA A++ L IKA
Sbjct: 69 -NLDKARKQLQIAKQIETTDRIQEALFADPERAYAKRAREKAVKADIERTYELAGGIKAD 127
Query: 120 ETKVLSKFNEYAEVGSKNLGFTLD---KQFGLDVFDEM-KGK--KTQNEQASRLVKQYFE 173
+ E + G L D D+ E+ +G T NE A +Q
Sbjct: 128 YMRQTMDAIEAMKHGQNFLARAFDIDNPAMERDIIREIYRGADGSTGNEVAKAAAQQIGA 187
Query: 174 TQRELHSQAHEAG-----LDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKD 228
T + + + AG LDY + R Q + + + +L LD S+Y D
Sbjct: 188 TSNAMRERFNRAGGNVGQLDYGYVPIRHSQAKILGNGSDAARHAWADFVLPRLDRSQYLD 247
Query: 229 IDGTPLSRSEI---------ASFVGEVFAERVRSTSFKDPSI-------------PSSEV 266
G PL + + S+ A R + + P
Sbjct: 248 DAGNPLDDAALRRVLTGEDRESWEARNIAARGMGVEPRQQGVWDTIAYGGVNKIVPGETT 307
Query: 267 GVKREF-----ERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPN 321
G RV HFKD+ AH++Y +G + +N ++ + ++K+I + GPN
Sbjct: 308 GAAARANAGSQHRVLHFKDADAHIEYNRAYGEGSLLNALI-DHVGGMAKNIALVERYGPN 366
>gi|146276496|ref|YP_001166655.1| hypothetical protein Rsph17025_0444 [Rhodobacter sphaeroides ATCC
17025]
gi|145554737|gb|ABP69350.1| hypothetical protein Rsph17025_0444 [Rhodobacter sphaeroides ATCC
17025]
Length = 830
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 114/283 (40%), Gaps = 29/283 (10%)
Query: 133 VGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDY-KF 191
VG +G + + D+ E+ + + N QA + Q+ + + G D +
Sbjct: 130 VGLNVIGSSRNPVLLRDLIRELHAEASGNAQAKAMADAVRTVQQRMRRAFNSYGGDIGEI 189
Query: 192 FENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID-GTPLS-------RSEIASFV 243
+ +P +R + + + L R D + G P + R+ F+
Sbjct: 190 ADYGVPHSHDAGAMRQAGFEAWAAEIEQRLAWDRIVDFNTGQPFAAPGQVPPRAVSGRFL 249
Query: 244 GEVFAERV-RSTSFKDPS--IPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI 300
+V+ V R +DPS + + +R R+ HF+ ++Y + FG S + +
Sbjct: 250 KDVYEGIVTRGWDDRDPSLAVGGKALANQRAERRLLHFRSGSDWIEYNKAFGASDPFSAM 309
Query: 301 LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ 360
+ L L++D+ + R LGP+ + ++ +A + A+ GN+ KLE R
Sbjct: 310 MNG-LHGLARDVALMRVLGPSPKAGLE--YAAQVAKKRAATIGNQ---------KLEARV 357
Query: 361 EAMLQMWEVMRY-----GETVENTGWANWMAGLRSAAGASMLG 398
+ ++ + M + GWA + +G R+ + LG
Sbjct: 358 DTQSKVAKAMLMHLDGSANVPDRAGWAAFFSGTRAVLTSIQLG 400
>gi|262043550|ref|ZP_06016663.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039084|gb|EEW40242.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 143
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 766 GPVPSMVTNLTSSAVELATKDNENSKVNAT-----KAIRKTLPFMNMWYLKNSFDHLILN 820
GPV S++ S+A + T + ++ +A + PF+N+++L+ + + LILN
Sbjct: 47 GPVTSLMGPAASNADSIITLLQQTTRGDADLGDWYRTALDNTPFLNVFWLRTAMNGLILN 106
Query: 821 QILEELNPGYLDRQQSKKKKK 841
+I + L+PG L+R Q + +++
Sbjct: 107 RIQDALDPGSLERYQRRVERE 127
>gi|291336683|gb|ADD96225.1| hypothetical protein Rsph17025_0444 [uncultured organism
MedDCM-OCT-S08-C1350]
Length = 850
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 153 EMKGKKTQNEQASRLVKQYFETQRELHSQAHEAG---LDYKFFENRIPQPMSVDKLRATK 209
E+ G+ T N A +L + ET L + ++ G L K + +PQ +R +
Sbjct: 161 ELMGETTGNVNAKQLADAWRETAEHLRKRFNKFGGKVLSRKDWG--LPQIHDSLLVRQSS 218
Query: 210 KDDFVRSMLDWLDLSR-YKDIDGTPLSRSEIASFVGEVFAERVRS--TSFKDPSIPSSEV 266
K D++ +L LDL + + G P + I + EV+ +FK +
Sbjct: 219 KADWIDYILPKLDLDKMVNERSGLPFNDKTIREALSEVYDNIATEGMATFKPGTAGYGRA 278
Query: 267 GVKREFE-RVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNAD-- 323
R + R FK++ M+Y FG T++ + ++++DI + + LGPN D
Sbjct: 279 LHNRRIDHRFLAFKNADDWMEYQTRFGSPDPFKTMM-EHINAMARDISMLKILGPNPDAT 337
Query: 324 -SFVKQMIVQTIANDQEASAGNK 345
++ MI + + D A A K
Sbjct: 338 HTWALGMIKKQMKIDAAAEAQGK 360
>gi|251799040|ref|YP_003013771.1| NADH:flavin oxidoreductase/NADH oxidase [Paenibacillus sp. JDR-2]
gi|247546666|gb|ACT03685.1| NADH:flavin oxidoreductase/NADH oxidase [Paenibacillus sp. JDR-2]
Length = 343
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 56 EDFQKELIRSVNDAID-------EAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSA 108
E F+ + R+V +D Y HQ S L +A YG+ + LF K KA +
Sbjct: 143 EKFRLAVRRAVQAGVDTIEIHGAHGYLIHQFVSPLTNKRADKYGQDRTLFGKEVIKAAKS 202
Query: 109 E----VPLEMKIKAAETKVLSKFNEYAEVG---SKNLGFTLD-KQFGLDVFDEMKGKKTQ 160
E +PL M+I A EYAE G ++++ F + K+ G+DVF G + Q
Sbjct: 203 EMPAHMPLFMRISA---------REYAEGGYGINESIAFAKEFKEAGVDVFHISAGGEGQ 253
Query: 161 NEQASR 166
A R
Sbjct: 254 IAAAGR 259
>gi|253578526|ref|ZP_04855798.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850844|gb|EES78802.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 393
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 480 GAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIK 539
G + LDK + +IV G + D +A +++ A + S +TDFT+
Sbjct: 169 GIQMLDKTDVD--VIIVGRGGGSIEDLWAFNEEIVARAIFECSTPIISAVGHETDFTIAD 226
Query: 540 RAKAMSSPDGYLYARTPSTIKNLKDADLRDLAR------------MSDKIAYHRKKLKNS 587
A + +P TPS L D R + MS K +R +L++
Sbjct: 227 FAADLRAP-------TPSAAAELAVDDYRSVIEAVSIYRQRLYRAMSGKTDLYRSRLEHF 279
Query: 588 KT----LSPEQR-QELQQQLADLERKEINILKDKVSNKMHAL 624
+T LSPE R +E +Q+LADLE N + K+ ++ H L
Sbjct: 280 QTKFAYLSPENRLREQRQRLADLENAVQNGMNRKLQDERHRL 321
>gi|171315464|ref|ZP_02904701.1| ABC transporter related [Burkholderia ambifaria MEX-5]
gi|171099464|gb|EDT44199.1| ABC transporter related [Burkholderia ambifaria MEX-5]
Length = 510
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 218 LDWLDLSRYKDID--GTPLSRSEIASFVGEVFAERV---RSTSFKDPSIPSSEVGVKREF 272
L+ LSR + I G L R EI F G + A R R+ DP + + E+ V +
Sbjct: 267 LEVSGLSRGRAIRDVGFTLRRGEILGFAGLMGAGRTEVARAVFGADP-VDAGEIRVHGKI 325
Query: 273 ERVFHFKDSQAH-MDYM----EHFGVSTNVNTILTSELASLSKDI-----VIARELGPNA 322
+ D+ AH + Y+ +HFG++ ++ L+S+ + + V ARE+ A
Sbjct: 326 VTIRTPADAVAHGIGYLSEDRKHFGLAVGMDVQNNIALSSMRRFVRRGMFVDAREMRDIA 385
Query: 323 DSFVKQMIVQTIANDQEA---SAGNK---VLKDWLGRN 354
S+V+Q+ ++T + Q A S GN+ V+ WL R+
Sbjct: 386 QSYVRQLAIRTPSVAQPARLLSGGNQQKIVIAKWLLRD 423
>gi|315122308|ref|YP_004062797.1| hypothetical protein CKC_02800 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495710|gb|ADR52309.1| hypothetical protein CKC_02800 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 56
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 801 TLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK 840
T+PF N+WY K+ FD+ + ++ + +NPG R ++ ++K
Sbjct: 8 TVPFQNLWYTKSVFDYFVRGKLDDAINPGNRARAEAYRRK 47
>gi|159896788|ref|YP_001543035.1| hypothetical protein Haur_0255 [Herpetosiphon aurantiacus ATCC
23779]
gi|159889827|gb|ABX02907.1| conserved hypothetical protein [Herpetosiphon aurantiacus ATCC
23779]
Length = 563
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 549 GYLYARTPSTIKNL---KDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADL 605
G A P+ N+ ++A DL R++D+I R+++ +TLSPE+R EL +QLA+L
Sbjct: 152 GITSAVLPNAQSNVLAEREAVKTDLERIADRIDQTREEIAKDETLSPEERVELDRQLAEL 211
Query: 606 ERKEINILKDKVSNKMHALV 625
+ L++ ++ AL
Sbjct: 212 SKD----LRENTGSREDALA 227
>gi|226312537|ref|YP_002772431.1| linear pentadecapeptide gramicidin synthetase LgrD [Brevibacillus
brevis NBRC 100599]
gi|226095485|dbj|BAH43927.1| linear pentadecapeptide gramicidin synthetase LgrD [Brevibacillus
brevis NBRC 100599]
Length = 5085
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 511 KDLKADPRLDPSIKAFFKQL-DDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRD 569
KDLK + LDP+I+A + D + F +A ++ G+L A + + DAD+
Sbjct: 4690 KDLKDEVILDPAIQAEHPYVGDPSQF----QAALLTGATGFLGAFLLRDLLQMTDADIYC 4745
Query: 570 LARMSDK---IAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVS 618
L R SD+ +A R+ L+ + + EQ + + DL + +N+ +D+ S
Sbjct: 4746 LVRASDEEEGMARLRQTLELYELWNEEQAHRIIPVIGDLAKPRLNLSEDQFS 4797
>gi|254515568|ref|ZP_05127628.1| methylcrotonoyl-CoA carboxylase beta chain [gamma proteobacterium
NOR5-3]
gi|219675290|gb|EED31656.1| methylcrotonoyl-CoA carboxylase beta chain [gamma proteobacterium
NOR5-3]
Length = 544
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 48/233 (20%)
Query: 557 STIKNLKDADLRDLARMSDKIAYHRKK---LKNSKTLSPEQRQELQQQLADLERKEINIL 613
S+I N +A R+ SD +A K L+ S+TLS R +++ L R+ + L
Sbjct: 10 SSINNASEAFARN---RSDHLALIEKMNGILERSRTLSDAARPRFEKRGQLLPRERLARL 66
Query: 614 KDKVS-----NKMHALVLD--NVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQ 666
D S M +LD N +TSV GA ++ + Y +GTR M Q
Sbjct: 67 LDPGSPFLEIGNMAGYLLDDTNPETSVPGA--------TQIAGIGYVQGTRC-----MIQ 113
Query: 667 ---------QFTTTPTGMFLNILDLSNSAKMP-------KGASMALNHVWIQYSATMALA 710
T T T I+D++ K+P GA++ ++Y M +A
Sbjct: 114 VDDSGINAGAMTRTSTRKGCRIMDIALQQKLPFLHLVESAGANL------LEYEVEMWMA 167
Query: 711 GIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGG 763
G G+ + A L + V++ + A GA +P + V + +A + G
Sbjct: 168 GGGIFARLARLSAAGLPVITVLHGASAAGGAYMPGLSDYVVGVKENGKAYLAG 220
Searching..................................................done
Results from round 2
>gi|254781202|ref|YP_003065615.1| hypothetical protein CLIBASIA_05545 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040879|gb|ACT57675.1| hypothetical protein CLIBASIA_05545 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120668|gb|ADV02491.1| hypothetical protein SC1_gp030 [Liberibacter phage SC1]
gi|317120812|gb|ADV02633.1| hypothetical protein SC1_gp030 [Candidatus Liberibacter asiaticus]
Length = 864
Score = 918 bits (2373), Expect = 0.0, Method: Composition-based stats.
Identities = 864/864 (100%), Positives = 864/864 (100%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK 60
MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK
Sbjct: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK 60
Query: 61 ELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAE 120
ELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAE
Sbjct: 61 ELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAE 120
Query: 121 TKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHS 180
TKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHS
Sbjct: 121 TKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHS 180
Query: 181 QAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIA 240
QAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIA
Sbjct: 181 QAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIA 240
Query: 241 SFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI 300
SFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI
Sbjct: 241 SFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI 300
Query: 301 LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ 360
LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ
Sbjct: 301 LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ 360
Query: 361 EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVG 420
EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVG
Sbjct: 361 EAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVG 420
Query: 421 IDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSG 480
IDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSG
Sbjct: 421 IDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSG 480
Query: 481 AEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKR 540
AEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKR
Sbjct: 481 AEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKR 540
Query: 541 AKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ 600
AKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ
Sbjct: 541 AKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ 600
Query: 601 QLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGE 660
QLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGE
Sbjct: 601 QLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGE 660
Query: 661 ALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKAL 720
ALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKAL
Sbjct: 661 ALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKAL 720
Query: 721 LRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAV 780
LRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAV
Sbjct: 721 LRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAV 780
Query: 781 ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK 840
ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK
Sbjct: 781 ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK 840
Query: 841 KGIELFQNMDEGLPHRLPFPFGED 864
KGIELFQNMDEGLPHRLPFPFGED
Sbjct: 841 KGIELFQNMDEGLPHRLPFPFGED 864
>gi|332344341|gb|AEE57675.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 824
Score = 776 bits (2002), Expect = 0.0, Method: Composition-based stats.
Identities = 199/883 (22%), Positives = 353/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYIRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E+++F+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L + E + + + V N A W +R+ AS LG + + +
Sbjct: 359 VE-----RLANKTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDYDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
+ +RGT GE R F + P + + + MP A +
Sbjct: 606 ERMFVGSGLQRGTWKGELTRSVFLFKSFPISVVMRHWHR--AMGMPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDP------SLPEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G I L+ G +P ++ + + L G Y D L ++
Sbjct: 662 LASTTMLGALSMQITDLINGRNPKEMTGDNMVKFWINAFLKGGGAGLYGDFLFSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|300898440|ref|ZP_07116781.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300357907|gb|EFJ73777.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 824
Score = 775 bits (2001), Expect = 0.0, Method: Composition-based stats.
Identities = 200/883 (22%), Positives = 353/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E++ F+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSEFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGS 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L + E + + + V N A W +R+ AS LG + + +
Sbjct: 359 VE-----RLANKTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q +RGT GE R F + P + + + MP A +
Sbjct: 606 EQMFVGSGLQRGTWKGELTRSVFLFKSFPISVVMRHWHR--AMGMPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDP------SLPEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G I L+ G +P ++ + + L G Y D L ++
Sbjct: 662 LASTTMLGALSMQITDLINGRNPKEMTGDNMVKFWINAFLKGGGAGLYGDFLFSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|331648163|ref|ZP_08349253.1| hypothetical protein ECIG_04089 [Escherichia coli M605]
gi|331043023|gb|EGI15163.1| hypothetical protein ECIG_04089 [Escherichia coli M605]
Length = 824
Score = 775 bits (2000), Expect = 0.0, Method: Composition-based stats.
Identities = 199/883 (22%), Positives = 354/883 (40%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E + R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALNKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQGAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E+++F+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L E + + + V N A W +R+ AS LG + + +
Sbjct: 359 VE-----RLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMEL--LSDVGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELVRARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q + +RGT GE R F + P + + + MP A +
Sbjct: 606 EQLITGSGIQRGTWKGELTRSVFLFKSFPISVVMRHWHR--AMGMPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDP------SLPEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G I L+ G +P ++ + + L G Y D L ++
Sbjct: 662 LASTTMLGALSMQITDLINGRNPKEMTGDNMVKFWINAFLKGGGAGLYGDFLFSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVVGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|298381705|ref|ZP_06991304.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|298279147|gb|EFI20661.1| conserved hypothetical protein [Escherichia coli FVEC1302]
Length = 824
Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats.
Identities = 200/883 (22%), Positives = 354/883 (40%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDQMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINNYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTDLLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E+++F+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGS 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L + E + + + V N A W +R+ AS LG + + +
Sbjct: 359 VE-----RLANKTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q +RGT GE R F + P + + + MP A +
Sbjct: 606 EQMFVGSGLQRGTWKGELTRSVFLFKSFPISVVMRHWHR--AMGMPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDP------SLPEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G I L+ G +P ++ + + L G Y D L ++
Sbjct: 662 LASTTMLGALSMQITDLINGRNPKEMTGDNMVKFWINAFLKGGGAGLYGDFLFSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|309702799|emb|CBJ02130.1| hypothetical phage protein [Escherichia coli ETEC H10407]
Length = 825
Score = 769 bits (1985), Expect = 0.0, Method: Composition-based stats.
Identities = 204/883 (23%), Positives = 353/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R SL + L+ AER R AG A
Sbjct: 2 MRQECIQAVQQAAKRTLTAREIQDIEDRIYRNMRSLARDDPASWRQLTDAERLRRAGQLA 61
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
++ Q+E R +L + ++ Q G GK AL + F A S + +
Sbjct: 62 SDELQREAALKKRRVALTISARQRLDNFINNYQ-GADGKLGALNRTIAFSADGKSNFLSV 120
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 121 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVFEMRGQNTGNAKARKGAKAW 180
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 181 GEVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVTKDKWVSDVIGKLDRKYYTRSD 240
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G +S SE+ +F+GE + K D + S R R HFKD+ +++ Y
Sbjct: 241 GQLMSDSELTAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 300
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 301 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 359
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L E + + + V N A W +R+ AS LG + + +
Sbjct: 360 VE-----RLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 412
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELL--SDVGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 413 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELALARRAGLAMESLLGSVNRWAMDNMG 472
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 473 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 531
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 532 ----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 575
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 576 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 606
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q +RGT GE R F + P + + + MP A +
Sbjct: 607 EQMFVGSGLQRGTWKGELTRSVFLFKSFPISVVMRHWSR--AMGMPSAGGRAAYIAT--F 662
Query: 704 SATMALAGIGVASIKALLRGEDPS------LPEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G I L+ G +P + + + L G Y D L ++
Sbjct: 663 LASTTMLGALSMQITDLINGRNPKEMTGDHMVKFWINAFLKGGGAGLYGDFLFSDHTRYG 722
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 723 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAA 782
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 783 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 825
>gi|323156120|gb|EFZ42279.1| hypothetical protein ECEPECA14_1895 [Escherichia coli EPECa14]
Length = 824
Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats.
Identities = 200/883 (22%), Positives = 353/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTDLLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E+++F+GE + K D + S V R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGVRANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGS 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L + E + + + V N A W +R+ AS LG + + +
Sbjct: 359 VE-----RLANKTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q + +RGT GE R F + P + + + MP A +
Sbjct: 606 EQLITGSGIQRGTWKGELTRSVFLFKSFPISVVMRHWSR--AMGMPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDPSL------PEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G + L G +P + L G L Y D L ++
Sbjct: 662 IASTTILGALSQQLNDLASGRNPREMTGEDAAKFWLGALLKGGGLGLYGDFLLSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + +E + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKSEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|89152441|ref|YP_512274.1| hypothetical protein PhiV10p20 [Escherichia phage phiV10]
gi|74055464|gb|AAZ95913.1| hypothetical protein PhiV10p20 [Escherichia phage phiV10]
Length = 824
Score = 737 bits (1901), Expect = 0.0, Method: Composition-based stats.
Identities = 198/883 (22%), Positives = 351/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTDLLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYIRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E+++F+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L E + + + V N + W +R+ AS LG + + +
Sbjct: 359 VE-----RLANNTENLYNF--ISGKTQPVANPHISRWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q + +RGT GE R F + P + + + +P A +
Sbjct: 606 EQLITGSGIQRGTWKGELTRSVFLFKSFPISVVMRHWSR--AMGIPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDPSL------PEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G + L G +P + L G L Y D L ++
Sbjct: 662 IASTTILGALSQQLNDLASGRNPREMTGGDAAKFWLGALLKGGGLGLYGDFLLSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|117624699|ref|YP_853612.1| hypothetical protein APECO1_4054 [Escherichia coli APEC O1]
gi|115513823|gb|ABJ01898.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|323948672|gb|EGB44577.1| hypothetical protein ERKG_04895 [Escherichia coli H252]
Length = 824
Score = 734 bits (1894), Expect = 0.0, Method: Composition-based stats.
Identities = 201/883 (22%), Positives = 350/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRMLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A K +
Sbjct: 120 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARNGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYIRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E++SF+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSSFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L E + + + V N A W +R+ AS LG + + +
Sbjct: 359 VE-----RLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K AK +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAKQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q + +RGT GE R F + P + + + MP A +
Sbjct: 606 EQLITGSGIQRGTWKGELTRSVFLFKSFPISVVMRHWSR--AMGMPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDPSL------PEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G + L G +P + L G L Y D L ++
Sbjct: 662 IASTTILGALSQQLNDLASGRNPREMTGEDAAKFWLGALLKGGGLGLYGDFLLSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + +E + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKSEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|327252171|gb|EGE63843.1| hypothetical protein ECSTEC7V_3018 [Escherichia coli STEC_7v]
Length = 824
Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats.
Identities = 199/883 (22%), Positives = 350/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYIRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E+++F+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L E + + + V N A W +R+ AS LG + + +
Sbjct: 359 VE-----RLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K A+ +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q + +RGT GE R F + P + + + MP A +
Sbjct: 606 EQLITGSGIQRGTWKGELTRSVFLFKSFPISVVMRHWSR--AMGMPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDPSL------PEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G + L G + + L G L Y D L ++
Sbjct: 662 IASTTILGALSQQLNDLASGRNHREMTGEDAAKFWLGALLKGGGLGLYGDFLLSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + NE + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|324008547|gb|EGB77766.1| hypothetical protein HMPREF9532_01734 [Escherichia coli MS 57-2]
Length = 824
Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats.
Identities = 201/883 (22%), Positives = 350/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRMLTAREIQNIEDRIYRNMRSIARDDPMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A K +
Sbjct: 120 ESRTKATRDYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQTTGNAKARNGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 REVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGRLDRKYYIRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E++SF+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDAELSSFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ Q A A+
Sbjct: 300 QQLYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGK 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+ +L E + + + V N A W +R+ AS LG + + +
Sbjct: 359 VE-----RLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSI 523
+ + + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + DTD++V K AK +G TP +I + D+ ++ L
Sbjct: 531 ----KGITDTDWSVWKLAKQEDWGNGNNTMLTPESIMRIPDSAVKHLG------------ 574
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
E +K + K+ V + V +V T
Sbjct: 575 -------------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
Q + +RGT GE R F + P + + + MP A +
Sbjct: 606 EQLITGSGIQRGTWKGELTRSVFLFKSFPISVVMRHWSR--AMGMPSAGGRAAYIAT--F 661
Query: 704 SATMALAGIGVASIKALLRGEDPSL------PEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G + L G +P + L G L Y D L ++
Sbjct: 662 IASTTILGALSQQLNDLASGRNPREMTGEDAAKFWLGALLKGGGLGLYGDFLLSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V ++ A + +E + + K + +P N+WYLK +
Sbjct: 722 SGALASMLGPVAGLVDDVVKIAQGIPLNAVEGKSEQTGGDLVKLGKGLMPGANLWYLKAA 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 782 LDHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|215487808|ref|YP_002330239.1| hypothetical protein E2348C_2741 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265880|emb|CAS10289.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
Length = 824
Score = 726 bits (1873), Expect = 0.0, Method: Composition-based stats.
Identities = 199/882 (22%), Positives = 347/882 (39%), Gaps = 85/882 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + L+ AER R AG A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDPMSWRQLNDAERLRRAGQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E+ R +L + ++ Q G GK AL + F A S + +
Sbjct: 61 AEELQREVALKKRRVALTIAARQRLDNFINSYQ-GADGKLGALNRTIAFSADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+KT N +A + K +
Sbjct: 120 ESRTKATRDYALSQLQEVFEAVDPRFFGLFEDEAGVRDLVFEMRGQKTGNAKAMKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD Y D
Sbjct: 180 GEVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRKYYTRAD 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G ++ +E+++F+GE + K D + S R R HFKD+ +++ Y
Sbjct: 240 GQLMNDTELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ L +SKDI + GPN D + ++ QT + A+
Sbjct: 300 QQMYG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQTKSETATANP----- 353
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
+D + E + + + V N A W +R+ AS LG + + +
Sbjct: 354 QDTGSIERQANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWMVASRLGSALLSSFSD 411
Query: 408 DGFIS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDA 464
G + ++ + +++ ++ M R EL GL E ++ +
Sbjct: 412 LGTMYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIK 524
+ + + + SG ++ + + +G + LK L D
Sbjct: 472 PSVSRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGDVVTRTPDLKSLSNDDFRILKS- 530
Query: 525 AFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKL 584
K + DTD++V K A+ G TP +I + DA + L
Sbjct: 531 ---KGITDTDWSVWKLAQQEDWGKGNDTMLTPESIMRIPDAAVEHLG------------- 574
Query: 585 KNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDR 644
+K + K+ V + V +V T
Sbjct: 575 ------------------------SPERVKFEAMRKLLGAVTEEVDMAV----ITPGARE 606
Query: 645 QRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYS 704
Q + +RGT GE R F + P + + + MP A +
Sbjct: 607 QMVTGSGIQRGTWKGELTRSVFLFKSFPISVVMRHWSR--AMGMPSAGGRAAYIAT--FI 662
Query: 705 ATMALAGIGVASIKALLRGEDPSL------PEVIYDGTLANGALLPYMDRLTKLVSKGDR 758
A+ + G + + G +P + L G L Y D L ++
Sbjct: 663 ASTTILGALSQQLNDMASGRNPRDMVGEDAAKFWLGALLKGGGLGLYGDFLLSDHTRYGS 722
Query: 759 AAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
A+ +LGPV +V ++ + +E + + K + P N+WYLK +
Sbjct: 723 GALASMLGPVAGLVDDVIKIGQGIPLNAVEGKSEQTGGDLVKLGKGLTPGANIWYLKAAL 782
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 783 DHMIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 824
>gi|85059173|ref|YP_454875.1| hypothetical protein SG1195 [Sodalis glossinidius str. 'morsitans']
gi|84779693|dbj|BAE74470.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 824
Score = 714 bits (1841), Expect = 0.0, Method: Composition-based stats.
Identities = 183/883 (20%), Positives = 345/883 (39%), Gaps = 87/883 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
M+ ECIQ + A+ R L+ E++ +ED IV+ L + LS++ER + AG A
Sbjct: 1 MRQECIQAITAASKRTLTSAEIQGIEDRIVKNMRHLARNDPTSWRSLSESERMQRAGHMA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E ++E R +L + + + G GK +AL + F A + + +
Sbjct: 61 AEALEREATLKKRRVALTIAARQRLDNFIAGYK-GKGGKLEALNRTIAFHADGKAPFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ +E ++ + + DKQ D+ EM+G+ T N +A + + +
Sbjct: 120 ESRTKATRDYALSQLDELFSAIDPRFFQLFEDKQGISDLVYEMRGQDTGNVRAKKGAEAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
L + ++AG D E+ +PQ S++K+ + D+V ++ LD ++Y +
Sbjct: 180 KNVSELLRRRFNDAGGDIGHLEDWGMPQHHSMEKVGKATQSDWVGFVMGKLDRNKYVKEN 239
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G +S ++A F+G + K D S R ER HFKD++ ++ Y
Sbjct: 240 GELMSDKDVADFLGHAYKTIATGGMNKLGDSGRRLSGARANRGNAERQIHFKDAEGYLAY 299
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ FG ++ IL + L +SKDI + GPN D + ++ + A + +
Sbjct: 300 QQRFG-EKSMWDILVNHLDGMSKDIALVETYGPNPDQVFRSLLDELAAKTADETPSRTGK 358
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
KL+ + E + + + + N A W +R+ AS LG I +L +
Sbjct: 359 -----IKKLKNKTEDLYNF--IAGKTQPIANPHIARWADHVRNWLVASRLGSALISSLSD 411
Query: 408 DGFISRQM-LSRVGIDKEAIQRINKMPLK--ERMELLSDVGLYAEGVVAHGRNMMEGSDA 464
+G + ++ + + + ++ M + + L GL E ++ +
Sbjct: 412 NGTMYLTAKVNNLPMAQLLRNQLAAMNPANKDEIRLARGAGLAMETLLGSVNRWATDNMG 471
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL-KADPRLDPSI 523
+ + + + SG ++ + + IG + +A + + D R+ S
Sbjct: 472 PSPSRWVANAVMRASGLSAWSDAHKRAYGVTMMGGIGNLVRKHADIAKIADEDARILKS- 530
Query: 524 KAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
K + D+ + K A+ +G TP +I + + L L
Sbjct: 531 ----KGISSQDWKIWKLAEQEDWGNGNTTMLTPESIMRIPNEKLAALGN----------- 575
Query: 584 LKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFD 643
+K + K+ V + V +V T
Sbjct: 576 --------------------------AERVKFEAMRKLLGAVSEEVDMAV----VTPGAR 605
Query: 644 RQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQY 703
+ + +RG GE +R F + P + + + MP A +
Sbjct: 606 ERMVTGAAMQRGDWRGELVRSVFLFKSFPIAVMMRHWSR--ALNMPSAGGRAAY--LAAF 661
Query: 704 SATMALAGIGVASIKALLRGEDPSL------PEVIYDGTLANGALLPYMDRLTKLVSKGD 757
A+ + G I ++ G +P + + L G Y D L ++
Sbjct: 662 LASTTVLGAMSQQISEVIAGRNPRDITGDKALQFWVNAFLKGGGAGLYGDFLLSDHTRYG 721
Query: 758 RAAIGGLLGPVPSMVTN----LTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNS 813
A+ +LGPV +V + L + E + + K + +P N+WY K
Sbjct: 722 SGALASMLGPVAGVVDDAIKLLQGIPLNAVEGKPEQTGGDLVKFAKGMIPGQNLWYTKAV 781
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
FDH++ NQ+ E +PGYL R + + +K+ + + + LP
Sbjct: 782 FDHMVFNQLQEIFSPGYLRRMEKRSRKEFNQTYWWRPQDRLPQ 824
>gi|268589387|ref|ZP_06123608.1| hypothetical protein PROVRETT_05519 [Providencia rettgeri DSM 1131]
gi|291315414|gb|EFE55867.1| hypothetical protein PROVRETT_05519 [Providencia rettgeri DSM 1131]
Length = 823
Score = 667 bits (1720), Expect = 0.0, Method: Composition-based stats.
Identities = 174/882 (19%), Positives = 339/882 (38%), Gaps = 87/882 (9%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
M+ CI+ + A+ R+L+ +E++ +ED I+ + +L + LS++ER + AG A
Sbjct: 1 MRTACIEAIQNASKRQLTAREVQNIEDRIISSMRNLARNDPASWRLLSESERLQRAGQMA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
+ Q+E R +L ++ Q K +AL + F A S + +
Sbjct: 61 ATELQREADLKQRRVALTIAARQRLDEHINNFQG---SKLEALNRTIAFSADGKSNFMSV 117
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V K D+ D+ EMKG+ T+N +A + +
Sbjct: 118 ETRAKATINYALSQLQEAFEAVDPKFFQLFEDQNGVRDLIFEMKGQDTRNVRAKKGAAAW 177
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
L + + AG D E+ +PQ S+ ++ +D +V ++ LD ++Y D
Sbjct: 178 HNVTGMLRNSFNRAGGDIGHLEDWGLPQSHSMQRVGKVTQDKWVSDVIGKLDRNKYIKED 237
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G+ ++ +E+ F+ + K D I S + R R HFKD++++++Y
Sbjct: 238 GSVMNDAELKQFLDSAYETIATGGLNKINDRPIGVSGMRANRGNASRQIHFKDAESYLEY 297
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ +G ++ I+ + +SKDI + GPN D + ++ + + + +
Sbjct: 298 QQLYG-EKSLWDIMVGHIEGISKDIGLIETYGPNPDHVFQSLLNEVTEIEVKGTPSKTGK 356
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
L R E + + V N A + LR+ AS LG + + +
Sbjct: 357 -----IKNLRDRTENLYNF--ISGKTTPVANVHIAKFFDDLRNILIASRLGSALLSSFSD 409
Query: 408 DGFISRQM-LSRVGIDKEAIQRINKMPLK--ERMELLSDVGLYAEGVVAHGRNMMEGSDA 464
G + ++ + + ++ + + + L GL E ++ +
Sbjct: 410 LGTMYLTAKVNNLPSAQLLKNQLAALNPANKDELRLARRAGLSMETLLGSINRWANDNMG 469
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIK 524
+ + + SG + + + IG + + +A +K +
Sbjct: 470 PSFARWSANAVMRASGLSAWSDAHKRAFGVTMMGSIGDVVNRHADIKSIGEHDLAIMKS- 528
Query: 525 AFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKL 584
K + +TD+T+ + A+ +G TP +I ++ + L +
Sbjct: 529 ---KGITETDWTIWRLAEQEDWGNGNNTMLTPESIMHIPNERLTEFGN------------ 573
Query: 585 KNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDR 644
PE+ +K + + K+ V + V +V +
Sbjct: 574 -------PER------------------VKFEAARKLLGAVTEEVDMAV----ISPGARE 604
Query: 645 QRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYS 704
+ + +RG GE +R F F + P + + + + G L +
Sbjct: 605 RMMIGAGLQRGDWKGEIVRSFFLFKSFPISVVVRHWKRALGIQSAGGRVAYLA----AFI 660
Query: 705 ATMALAGIGVASIKALLRGEDPSLP------EVIYDGTLANGALLPYMDRLTKLVSKGDR 758
A + G I + G +P + + L G L Y D L +K
Sbjct: 661 AGTTVLGAISQQINDISSGRNPRDMADENWHKFWLNALLKGGGLGLYGDFLLSDHTKYGS 720
Query: 759 AAIGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSF 814
A LLGPV +V + A + E + + K ++ +P N+WY K
Sbjct: 721 DAFASLLGPVAGVVDDAIKLAQGIPLNAVEGKPEQTGGDTVKFVKGLIPGQNLWYTKAVL 780
Query: 815 DHLILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
DH++ NQ+ E +PGYL R + + KK+ + + + P+
Sbjct: 781 DHMVFNQLQEYFSPGYLRRMEKRSKKEFNQTYWWRPQDITPN 822
>gi|30387396|ref|NP_848225.1| hypothetical protein epsilon15p17 [Enterobacteria phage epsilon15]
gi|30266051|gb|AAO06080.1| 17 [Salmonella phage epsilon15]
Length = 918
Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats.
Identities = 195/939 (20%), Positives = 359/939 (38%), Gaps = 110/939 (11%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGK-------GLSKAERYRLAG-- 51
MK C++ + + GR+ EL+ +ED I A + K G+ A+ Y A
Sbjct: 1 MKQACVEAIAQTLGRQPKADELKGIEDRIKEAVRQVHKKNAKEGKTGIPDAQTYMEAADL 60
Query: 52 --LKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAE 109
+ D K+ R +AI + L +++ Q Q +F G
Sbjct: 61 VRQRVVHDVYKKRQRVAQNAIAISRVTDTLDANIPPEQQTPANLQQFIFAGRRTTDGKDI 120
Query: 110 V-----------------PLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGL---- 148
L ++ A V F + +G + D+Q
Sbjct: 121 AVTSAEELSTGAYQDWSRQLSAELLKAGDDVRKFFEQSKALGEQRFRSLFDQQAAKSAQF 180
Query: 149 DVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRA 207
+ E+ G+ T N QA ++ + + + + ++ G D ++ +P D +R
Sbjct: 181 QILKELYGEDTGNPQAKKIAQVWNDVTSRARQEMNDNGFDIGLRDDWHLPYVDDADFIRN 240
Query: 208 TKKDDF----------------------------VRSMLDWLDLSRYKDIDGTPLSRSEI 239
+D++ V + + D S Y + DG+P++ E
Sbjct: 241 AGRDEWLASLPAAERAKAQLSGRQPPIEFARQAWVDDVYNTQDRSNYVNPDGSPMNDIEY 300
Query: 240 ASFVGEVFAERVRSTSFK-DPSIPSSEVGVKREFE--RVFHFKDSQAHMDYMEHFGVSTN 296
+ +F + + K DP G+K RV FKD+Q+H YME +
Sbjct: 301 RQALEAIFETKATDGANKIDPGAFMGTGGIKNRGSQNRVMAFKDAQSHFAYMERY-TQQP 359
Query: 297 VNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKL 356
V ++ S L S S+D+ + + GP+A ++ + Q A G K + +
Sbjct: 360 VAGVMMSHLQSSSRDLGVVKAFGPDAARNFSLVLDRVY---QRAVTGGKAV------GHM 410
Query: 357 EVRQEAMLQMWEVMRYGETVE-NTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQM 415
++ + +M+ M ++ + + + GLR+ ++MLG + A + I R
Sbjct: 411 NEERKMVERMFNSMAGLNGAATSSVFTSAVGGLRNLMTSAMLGTSVLTATSDQA-IMRAN 469
Query: 416 LSRVGIDKEAI----QRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKL 471
+G ++ + I + + +++GL + A M + I
Sbjct: 470 AQALGFTRDGMRLSANTIKNLFSGDAKRANAELGLLVDSHAAVVSKMGGFDLSRGITGWF 529
Query: 472 HSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLD 531
K KWSG +D+ ++ L++Y IG +T + +L D+K + + K
Sbjct: 530 AEKTLKWSGLIAMDRANKAAFGLLMYKNIGELTRKFKTLDDVKGSDKTILAN----KGWS 585
Query: 532 DTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLA--RMSDKIAYHRKKLKNSKT 589
+ D+ ++ A+ TP I + D + + R++ A + L
Sbjct: 586 NEDWAIMAAAELQPMTTAGHMGMTPDAIYAVPDNVITGIMADRIAQVRAGSEEVLAALGD 645
Query: 590 LSPEQRQELQQQL-ADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLG 648
L PE+ + ++Q A+ E+ ++++ +L + A+ T+ G
Sbjct: 646 LPPERLKRMRQAFDAEAEQTITRMVRNARVEAAQK-LLGITHGEMTSAVTTA------TG 698
Query: 649 LLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSA-KMPKGASMALNHVWIQYSATM 707
L TY R AG+ ++ F F TTP F +++ +N +P +A Y A
Sbjct: 699 LDTYARDD-AGQLIKSFMLFKTTPFAGFRQLVNRANDLDTVPAIKFLA------SYIAGT 751
Query: 708 ALAGIGVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGL 764
LAG+ + +LL G DP + P L G+ Y D L + ++ + +
Sbjct: 752 TLAGMFANQMNSLLTGNDPLDMTKPTTWVQALLKGGSFGIYGDFLFQDHTQYGSSIAATI 811
Query: 765 LGPVPSMVTNLTSSAV----ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILN 820
GPV S LT + + + + +A K R PF N+WY K +HLIL
Sbjct: 812 GGPVLSFAEQLTKLLITNPQKALQGEETSFGADALKTARMITPFANLWYAKAITNHLILQ 871
Query: 821 QILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
Q+ E NPGY DR + + +++ + P R P
Sbjct: 872 QLQEMANPGYNDRVRDRAQREFNTTSWWEPGSTTPRRAP 910
>gi|301028422|ref|ZP_07191668.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299878533|gb|EFI86744.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 918
Score = 646 bits (1665), Expect = 0.0, Method: Composition-based stats.
Identities = 193/939 (20%), Positives = 363/939 (38%), Gaps = 110/939 (11%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGK-------GLSKAERYRLAG-- 51
MK C++ + + GR+ EL+ +ED I A + K G+ A+ Y A
Sbjct: 1 MKQACVEAIAQTLGRQPKADELKNIEDRIKEAVQHVHRKNAKEGKSGIPDAQTYMDAAEL 60
Query: 52 --LKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAE 109
+ D K+ R +AI + L +++ Q Q +F + +
Sbjct: 61 VRQRVVHDVYKKRQRVAQNAIAISKITDTLDANIPPDQQTPVNLQQFIFAGRRSRDKADI 120
Query: 110 V-----------------PLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGL---- 148
L ++ A V F + +G + D+Q
Sbjct: 121 SVTSAEELAIGAYQDWSRQLSAELLKAGDDVRKFFEQSRALGEQRFRSVFDRQAAKSAQL 180
Query: 149 DVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRI-PQPMSVDKLRA 207
+ E+ G+ T N A ++ + + + + + ++ G D E+ P D +R
Sbjct: 181 QILKEIYGEDTGNPLAKKIAQIWKDVTGRVRHEMNDNGFDIGLREDWHTPYVDDADLIRN 240
Query: 208 TKKDDFVRSM---------------------LDWL-------DLSRYKDIDGTPLSRSEI 239
+++++ S+ W+ D S Y + DG+ ++ E
Sbjct: 241 AGREEWLASLPVAEQATARLSGRQPPIEFARQKWVDDAYNTQDRSNYVNPDGSIMNDVEY 300
Query: 240 ASFVGEVFAERVRSTSFK-DPSIPSSEVGVKRE--FERVFHFKDSQAHMDYMEHFGVSTN 296
+ +F + + K +P G+K RV FKD+Q+H YME +
Sbjct: 301 RQALEAIFETKATDGANKIEPGTFMGAGGIKSRGSQHRVMAFKDAQSHFAYMERY-TQQP 359
Query: 297 VNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKL 356
+ ++ S L S S+D+ + + GP+A+ ++ + + A G K K+ KL
Sbjct: 360 LVGVMMSHLQSSSRDLGVVKAFGPDAERNFSLVLDRIY---KRAVTGGKRKKEMEDEAKL 416
Query: 357 EVRQEAMLQMWEVMRY-GETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQM 415
+ +M+ M ++ +++ + GLR+ ++MLG + A + I R
Sbjct: 417 ------VARMFNSMAGLNGVASSSVFSSAVGGLRNLMTSAMLGTSVLTATSDQA-IMRAN 469
Query: 416 LSRVGIDKEAI----QRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKL 471
+G + + I + + + +++GL + A M + I
Sbjct: 470 AQALGFTRGGMRLSVNTIKNLFSGDAKKANAELGLLVDSHAAVVSKMGGFDLSRGITGWF 529
Query: 472 HSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLD 531
K KWSG +D+ +S L++Y IG +T + +L D+K + + K
Sbjct: 530 AEKTLKWSGLIAMDRANKASFGLLMYKNIGELTRKFKTLDDMKGTDKTILAN----KGWS 585
Query: 532 DTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLA--RMSDKIAYHRKKLKNSKT 589
+ D+ ++ A+ TP I + D + D+ R++ A K L
Sbjct: 586 NEDWAIMAAAELRPMTTAGHMGMTPDAIYAVPDNVIADIMADRITRIRAGSEKALAALGD 645
Query: 590 LSPEQRQELQQQL-ADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLG 648
L PE+ + +++ A+ E+ ++++ + +L + A+ T+ G
Sbjct: 646 LPPERLKRMKEAFDAEAEQTITRMIRNARAEAAQK-LLGITHGEMTNAVTTA------TG 698
Query: 649 LLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSA-KMPKGASMALNHVWIQYSATM 707
+ TY R AGE ++ F F TTP F +++ + +P +A Y
Sbjct: 699 IDTYARDD-AGELMKSFMLFKTTPFAGFRQLVNRTRDLDTVPAIKFLA------SYIGGT 751
Query: 708 ALAGIGVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGL 764
LAG+ + +LL G DP + P L G+ Y D + + ++ + +
Sbjct: 752 TLAGMFAIQMNSLLNGNDPLDMTKPTTWVQALLKGGSFGIYGDFIFQDHTQYGSSIGATM 811
Query: 765 LGPVPSMVTNLTSSAV----ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILN 820
GPV S LT + + + + +A K R PF N+WY K +HLIL
Sbjct: 812 GGPVLSFAEQLTKLLITNPQKALQGEETSFGADALKTARMITPFANLWYAKAITNHLILQ 871
Query: 821 QILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
Q+ E NPGY DR + + +++ I + P R P
Sbjct: 872 QLQEMANPGYNDRVRDRAQREFDITSWWEPGAIAPRRAP 910
>gi|304398390|ref|ZP_07380264.1| hypothetical protein PanABDRAFT_3525 [Pantoea sp. aB]
gi|304354256|gb|EFM18629.1| hypothetical protein PanABDRAFT_3525 [Pantoea sp. aB]
Length = 921
Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats.
Identities = 195/939 (20%), Positives = 366/939 (38%), Gaps = 107/939 (11%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGI---VRAYVSLDGK----GLSKAERYR----L 49
MK C+ + + GR+ EL+ +ED I VR ++ + G A+ Y+ L
Sbjct: 1 MKQACVDAITQTLGRQPLASELKNIEDLISDSVRQVSRMNARAGKSGFPDADTYKQAADL 60
Query: 50 AGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAE 109
A + D K+ R +AI L ++ + SQ +F+ G
Sbjct: 61 AARRVVHDVFKKRQRLAQNAIAINNVTETLNRNVPAPEQTPKNLSQFIFSGRRVADGKEI 120
Query: 110 -----------------VPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGL---- 148
L ++ AA V F + +G + D++ G
Sbjct: 121 DVVSAEELATGAFQDWSRQLSAEMTAAGGDVQKFFEQAQALGEQRFRNIFDQRVGKSSQL 180
Query: 149 DVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRA 207
+ E+ G+ T N A ++ + + + +++G D ++ +P D +RA
Sbjct: 181 QLLKEIYGEDTGNPAAKKIASIWSDVTSRARQEMNDSGFDIGQRDDWHLPYVDEADLVRA 240
Query: 208 TKKDD----------------------------FVRSMLDWLDLSRYKDIDGTPLSRSEI 239
+++ +V + + D S++ + DGTP++ +
Sbjct: 241 AGREEWLATLPLAERTQARLAGRMPPGDWARRAWVDDIYNTQDRSQFVNPDGTPMNDVQY 300
Query: 240 ASFVGEVFAERVRSTSFK-DPSIPSSEVGVKRE--FERVFHFKDSQAHMDYMEHFGVSTN 296
+ +F + + K DP + G+K RV FKD+++H YME +
Sbjct: 301 REALEYIFETKATDGAQKLDPGAFAGSGGLKNRGSQSRVLAFKDAESHFGYMEKY-TQQP 359
Query: 297 VNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKL 356
V ++ S L + S+D+ + + GP+A + K + + N + + + +
Sbjct: 360 VVGVMMSHLQTASRDLGVVKAFGPDAGTNFKLIADRIYQNAVKVDGAGHPIAE------M 413
Query: 357 EVRQEAMLQMWEVMRYGETVENT-GWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQM 415
+E + +M++ M V +T +++ + GLR+ ++MLG I A + + R
Sbjct: 414 NKERELVQRMFDSMAGLNGVNSTSVFSSAVGGLRNLMTSAMLGSSVITATSDQAVM-RAA 472
Query: 416 LSRVGIDKEAIQ----RINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKL 471
+G D+ ++ I + + +++GL + A M I
Sbjct: 473 AQALGFDRNGMRLSATTIRNLFSGDAKRANAELGLLVDAHSAVIAKMGGFDLTRGITGWF 532
Query: 472 HSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLD 531
K KWSG +D+ ++ L++Y IG +T YA+L LK + S K
Sbjct: 533 AEKTLKWSGLIAMDRANKAAFGLLMYKNIGELTRRYATLDALKGSDKALLSS----KGWS 588
Query: 532 DTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDL--ARMSDKIAYHRKKLKNSKT 589
D+ ++ A+ TP I + D +R + ++ A + L N
Sbjct: 589 AEDWAIMNAAELKPLTTSGHMGITPDAIYAVPDEKVRQILAGQIDRVRAGADEALANLGA 648
Query: 590 LSPEQRQELQQQL-ADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLG 648
++ + L+Q A++E+ ++++ + +L + A+ T+ G
Sbjct: 649 MTDSRATNLRQAYDAEVEQTISRMVRNARAEAAQK-LLGVTHGEMSQAITTA------TG 701
Query: 649 LLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLS-NSAKMPKGASMALNHVWIQYSATM 707
+ TY R + GE + F F TTP F ++ + N ++P +A Y
Sbjct: 702 IDTYAR-DQGGELYKSFMLFKTTPFAGFRQMVTRAQNLDRVPALKFLAA------YIGGT 754
Query: 708 ALAGIGVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGL 764
L G+ + ALL G DP + P TL G Y D L + ++ + L
Sbjct: 755 TLTGMFANQLNALLSGNDPIDMTKPGAWVGATLKGGGFGIYGDFLFQDHTQYGSSIAATL 814
Query: 765 LGPVPSMVTNLTSSAV----ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILN 820
GP + +L + + + + +A K R PF N+WY K +HLIL
Sbjct: 815 GGPSLGLAESLMKLLITNPQKAMQGEETSFGADAIKTARMITPFANLWYTKAVTNHLILQ 874
Query: 821 QILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
Q+ E NPGY DR + + + + + + N + P R P
Sbjct: 875 QLQEMANPGYNDRVRDRAQNQFDVTSWWNPGDTEPRRTP 913
>gi|319793417|ref|YP_004155057.1| hypothetical protein Varpa_2748 [Variovorax paradoxus EPS]
gi|315595880|gb|ADU36946.1| hypothetical protein Varpa_2748 [Variovorax paradoxus EPS]
Length = 838
Score = 637 bits (1643), Expect = e-180, Method: Composition-based stats.
Identities = 186/893 (20%), Positives = 332/893 (37%), Gaps = 98/893 (10%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL----DGKGLSKAERYRLAGLKAEE 56
MKP CI + +A GR +S EL+ +ED I R L DG L+ +R+ A +A E
Sbjct: 1 MKPACIDAVIEAVGRPMSDAELKGIEDRIGRELRRLGNGPDGLRLTGEQRFFEAARRARE 60
Query: 57 DFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAE---VPLE 113
F E K Q+ L AG G A +L G A+ + +E
Sbjct: 61 SFLGEQELKARRDALAVLKHAQVEQAL----AGFPGDKIAGLRRLLAFHGDAKGSTLSVE 116
Query: 114 MKIKAAETKVLSKFN-EYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYF 172
K +A E + K G + + EM G+ + +A ++
Sbjct: 117 SKAEAIEADAFRQMLGTLEATNPKFFGLFESPEGVRALVREMFGEDSGVREAKEGAAEFK 176
Query: 173 ETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDG 231
+ EL + ++AG + E+ +P S +K+ A + +V L+ RY++ DG
Sbjct: 177 KVADELLGRFNDAGGKIRPREDWGLPHHHSQNKIAAAGEAVWVEKTFPLLNRDRYRNEDG 236
Query: 232 TPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVK-----REFERVFHFKDSQAHMD 286
+ ++ S++ +F+ E + +T + P + G R H++ + ++
Sbjct: 237 SRMNDSQVLAFLRESYQT--LATGGVNTLEPGAGGGETMRANLHAAAREIHYRSADDYLA 294
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQM--IVQTIANDQEASAGN 344
Y + FG + +LT + L+ I + GPN D K + Q + +
Sbjct: 295 YQKDFG-ERGLYDVLTGHVRGLADSIAMVETFGPNPDHAFKYFRDLAQREMTVADPTKHG 353
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
K+ K +G + L V V + A LR AS LG I +
Sbjct: 354 KIAKQLVGLDNLYNY---------VSGKTLPVASEWLAQGFDSLRKWLVASRLGSAFISS 404
Query: 405 LLEDGFISRQM-LSRVGIDKEAIQRINKMPLKER--MELLSDVGLYAEGVVAHGRNMMEG 461
L ++ + ++ + + + + + + GL + ++ +
Sbjct: 405 LPDEATMQLTARVNNIDGMQVFRNELAALNPANQMEKRMAQRAGLALQTMIGSLNRFGDE 464
Query: 462 SDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDP 521
+ + K+ + + SG + + R + + + + +G +T D +A +LDP
Sbjct: 465 NMRNTLATKMATFTMRASGLNAITEARRRAFGVTMMSSLGHLTR------DAEAPSKLDP 518
Query: 522 SIKAFF--KQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAY 579
K + D D+ V KRA+ G TP I + D L + +
Sbjct: 519 MDHRILLSKGITDADWQVWKRAELEDWGGGNGTMLTPEAIYRIPDEALVGIGNLDAN--- 575
Query: 580 HRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHT 639
+ R++ +L + +E N+ + ++ A + N+Q
Sbjct: 576 -----------PQQLRRDAATRLLGVVLEEQNMAVVEPGSRERAALYSNLQ--------- 615
Query: 640 SLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHV 699
RGT GE R F T P M + + P S A
Sbjct: 616 --------------RGTWKGELTRSVFLFKTMPIAMLMRHWER--GMSGPDARSKAGYIG 659
Query: 700 WIQYSATMALAGIGVASIKALLRGEDPSL---------PEVIYDGTLANGALLPYMDRLT 750
+ + + G+ I LL+G DP L G+L Y D L
Sbjct: 660 ALM--VSTTVMGMLALQIDELLKGRDPVNMNPFEGKAGARNWVRAFLKGGSLGIYGDFLF 717
Query: 751 KLVSKGDRAAIGGLLGPVPSMVTN----LTSSAVELATKDNENSKVNATKAIRKTLPFMN 806
++ I LGPV V + V+L + ++ K + P N
Sbjct: 718 SEQNQHGGGPIASALGPVVGAVEEAFGLTQGNLVQLGQGKDTHAGAELLKFAKGMTPGAN 777
Query: 807 MWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
+WYLK + +HLI NQ+ E ++PGYL R +S+ +++ G + + + +P R P
Sbjct: 778 LWYLKAATNHLIFNQLQEMVSPGYLARVKSRAQREFGTTEWWDSRQAVPDRAP 830
>gi|330007168|ref|ZP_08305910.1| hypothetical protein HMPREF9538_03599 [Klebsiella sp. MS 92-3]
gi|328535515|gb|EGF61975.1| hypothetical protein HMPREF9538_03599 [Klebsiella sp. MS 92-3]
Length = 924
Score = 636 bits (1639), Expect = e-180, Method: Composition-based stats.
Identities = 194/941 (20%), Positives = 360/941 (38%), Gaps = 108/941 (11%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGK-------GLSKAERYRLAGLK 53
MK CI + GR+ E++ +ED I A + + G+ AE YR A
Sbjct: 1 MKQACIDAVANTLGRQPKADEIKNIEDRIKDAVRVIARRNAREGKTGIPDAETYRQAAEL 60
Query: 54 A----EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKA---- 105
A K+ R +AI A R L + + Q +F+ +
Sbjct: 61 AAAQAVHAVFKKRQRVAQNAIAIAKVRDTLNKAIPENEQTPIALQQFIFSGRRGRDKQPD 120
Query: 106 --------------GSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLG--FTLDKQFGL- 148
L ++ AA V F + +G + L D++
Sbjct: 121 INVVSAEEMATGAYQDWTRQLSAELTAAGDDVQKFFYQSQALGEQRLRNLLPFDREASRS 180
Query: 149 ---DVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDK 204
+ E+ G+ T N A ++ K + + + +++G D ++ +P +
Sbjct: 181 GQLQILKEIYGEDTGNPAAKKIAKVWGDVTSRARQEMNDSGFDIGLRDDWHLPYVDDAEL 240
Query: 205 LRATKKDDFVRSM---------------------LDWL-------DLSRYKDIDGTPLSR 236
+RA +D+++ S+ W+ D S+Y ++DG+P++
Sbjct: 241 IRAAGRDEWLSSLPLNERAAAIAAGRQPPQDFARQAWVDDVWNTQDRSQYVNLDGSPMND 300
Query: 237 SEIASFVGEVFAERVRSTSFK-DPSIPSSEVGVKRE--FERVFHFKDSQAHMDYMEHFGV 293
E + ++ +V + K DP G+K RV FKD+++H YME +
Sbjct: 301 IEYRQALEAIYETKVTEGANKIDPGAFMGSGGIKNRGSQSRVMAFKDAKSHFSYMERY-T 359
Query: 294 STNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGR 353
V ++ S L S S+D+ + + GP+A S K ++ Q + G + +
Sbjct: 360 QQPVVGVMMSHLQSSSRDLGVVKAFGPDAASNFKLLMDQIYQRATSTTGGGHDIGTMNDQ 419
Query: 354 NKLEVRQEAMLQMWEVMRY-GETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFIS 412
+L + +M+ M ++ +++ + GLR+ ++MLG A + I
Sbjct: 420 RQL------VERMFNSMAGLNGVASSSVFSSAVGGLRNLMTSAMLGTSVFTAASDQA-IM 472
Query: 413 RQMLSRVGIDKEAI----QRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIG 468
R +G D+ + + + + +++GL + A M + I
Sbjct: 473 RANAQALGFDRNGMRLSANTLRNLFNGDAKRANAELGLLVDAHAAVVSKMGGFDLSRGIT 532
Query: 469 HKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFK 528
K KWSG +D+ ++ L+++ IG ++ Y SL L R + K
Sbjct: 533 GWFAEKTLKWSGLIAMDRANKAAFGLLMFKNIGELSRKYKSLDALTGSDRTVLAN----K 588
Query: 529 QLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLA--RMSDKIAYHRKKLKN 586
D+ ++ A+ TP I ++ D +R++ R+ + L
Sbjct: 589 GWTPEDWAIMSAAELRPLTPDGHKGMTPDAIYDVPDETVRNILADRIEKVRVGSDQALAA 648
Query: 587 SKTLSPEQRQELQQQL-ADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQ 645
++ +R+ L+Q A++E+ ++++ + +L + A+ T+
Sbjct: 649 LGDMTDAKRKTLKQAFDAEVEQTISRMVRNARAEAAQ-HLLGITHGEMTSAVTTA----- 702
Query: 646 RLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSA 705
GL + R T +G+ L+ F F TTP + + +M + Y A
Sbjct: 703 -TGLDAFARDT-SGDLLKSFMLFKTTPMAGMRQFVTRLQDLE-----TMPAVKFFAAYVA 755
Query: 706 TMALAGIGVASIKALLRGEDP---SLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIG 762
LAG+ + ALL G DP + P+ L G+ Y D L + ++ + G
Sbjct: 756 GTTLAGMFANQMNALLSGNDPLDMTKPQTWLQALLKGGSFGIYGDFLFQDHTQYGSSIAG 815
Query: 763 GLLGPVPSMVTNLTSSAV----ELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLI 818
L GPV L+ + + + + +A K R PF N+WY K +HLI
Sbjct: 816 ILGGPVLGFAEQLSKTVLTNSQKAMAGEETTFTADALKTARMITPFANLWYTKAITNHLI 875
Query: 819 LNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
L Q+ E NPGY R + + ++ + E P R P
Sbjct: 876 LQQLQEMANPGYNARVRDRAMREFNTTSWWEPGEETPRRAP 916
>gi|169795397|ref|YP_001713190.1| putative phage related protein [Acinetobacter baumannii AYE]
gi|169148324|emb|CAM86189.1| conserved hypothetical protein; putative phage related protein
[Acinetobacter baumannii AYE]
Length = 841
Score = 624 bits (1608), Expect = e-176, Method: Composition-based stats.
Identities = 187/898 (20%), Positives = 345/898 (38%), Gaps = 104/898 (11%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLK 53
MK +C Q + KA G++ LS +E +E I +L + + LS AE+ A +
Sbjct: 1 MKEQCKQAVAKALGKQSLSAQEATDIEARINETMRNLARKDINNWRNLSDAEKLTEAAKQ 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG-SAEVPL 112
D Q++L R A + K+ Q + LD G + + + S +
Sbjct: 61 VAIDIQEQLKRKHKIAAQDILKQSQNIAALD---HGKLSSMEVIDRMVAAHGDMSGIQSI 117
Query: 113 EMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYF 172
+ K + + + ++ LG D++ + E G+ T + A ++ +
Sbjct: 118 DSKARGIASIYRGELVDFYTNIKGGLGVFTDQELVQKIVRERFGENTGDALAKKISDKMG 177
Query: 173 ETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDG 231
+ + + + G D +N +PQ +++K+ K+ +V +D +Y +G
Sbjct: 178 DVFETMRDRFNRNGGDIGKLDNWGLPQTHNLEKIAKAGKEAWVNKAESLIDTRQYVHENG 237
Query: 232 TPLSRSEIASFVGEVFAERVRSTSFK------DPSIPSSEVGVKREFERVFHFKDSQAHM 285
S+ EI S + + + K +S+V + RV HFKD+++ +
Sbjct: 238 DYYSQQEIRSLLEYTYDTLSSDGANKIEVGRQATGGGTSKVTNRHGESRVLHFKDAESWL 297
Query: 286 DYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNK 345
+Y FG V ++ + + LSKDI + LG N + +K ++ D E K
Sbjct: 298 EYQSEFGGMQFV-DLVEAHINGLSKDIAMVENLGSNPKTALKILMDAAAKKDWEGQIPEK 356
Query: 346 VLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGAL 405
K ++ + M++ + G + ++ AN RS A+MLG I ++
Sbjct: 357 TTKRV---------RKRIETMFDELSGGNSPQSEVLANLGVLYRSMNVAAMLGGTTISSI 407
Query: 406 LEDGFISRQM----LSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEG 461
+ I++ LS E + ++N +R EL +GL E ++ G
Sbjct: 408 TDQAMIAKTANVHGLSYRKTFGELVDQLNPANKADR-ELAHSLGLATEEMI--GSIARWS 464
Query: 462 SDAFQIGHKLHSKMHKWSGAEYLDKKRISS-HALIVYNQIG---RMTDTYASLKDLKADP 517
D + K+ + S R+S +AL +++G + + Y L KA
Sbjct: 465 DDGLTSTYGKSEKLARISSGIASQVMRVSGLNALTAASKVGFTKLLMEKYGRLSRSKAWN 524
Query: 518 RLDPSIKAFFK--QLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSD 575
LD + LD+ + V + A + G + +I + D L
Sbjct: 525 DLDAQDRELLSNTGLDERAWQVFQLADPVVDRKGNQLM-SARSIYEIPDEKLTAFG---- 579
Query: 576 KIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRG 635
P+Q +KD+VS+++ A +LD +V
Sbjct: 580 ---------------DPKQ------------------VKDQVSSQLQAHLLDEQGLAVVE 606
Query: 636 AMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMA 695
A R++ + RGT GE +R QF + + + + + KG +
Sbjct: 607 A-----GLREKTLINVGARGTITGEIVRGLAQFKSFSAAFLMRHGSRAFAQEGIKGKAGY 661
Query: 696 LNHVWIQYSATMALAGIGVASIKALLRGEDPS------LPE----VIYDGTLANGALLPY 745
+++ T+ L G V +K LL G DP P+ + G L
Sbjct: 662 AVPLFV----TLTLLGGLVVQLKELLNGNDPQTIYDSNDPKKAGSFFIRSAVQGGGLSFL 717
Query: 746 MDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVN----ATKAIRKT 801
D L R A + GP+ + T L V T+ NE N A K ++
Sbjct: 718 GDILVAGTDTSGRDANSFVAGPLGNDFTALLGLTVGNLTQYNEGKDTNFGNEAFKFVKGK 777
Query: 802 LPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK-KGIELFQNMDEGLPHRLP 858
+P N+WY K + + ++ +++ + + PGY ++ K ++ + E F D+ R P
Sbjct: 778 IPAQNLWYTKAAINRMVFDEMQDTIAPGYREKALRKAERQQDRERFWG-DDINDIRAP 834
>gi|332875212|ref|ZP_08443045.1| hypothetical protein HMPREF0022_02678 [Acinetobacter baumannii
6014059]
gi|332736656|gb|EGJ67650.1| hypothetical protein HMPREF0022_02678 [Acinetobacter baumannii
6014059]
Length = 841
Score = 621 bits (1600), Expect = e-175, Method: Composition-based stats.
Identities = 187/899 (20%), Positives = 345/899 (38%), Gaps = 106/899 (11%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLK 53
MK +C Q + KA G++ L+ +E +E I +L + + LS AE+ A +
Sbjct: 1 MKEQCKQAVAKALGKQSLTAQEATDIEARINETMRNLARKDINNWRNLSDAEKLSEAAKQ 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
D Q++L R A + K+ Q + LD + S + +++ G S
Sbjct: 61 VAIDIQEQLKRKHKIAAQDILKQSQNIAALDHSKLS----SMEVIDRMVAAHGDMSGIQS 116
Query: 112 LEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
++ K + + + ++ LG D++ + E G+ T + A ++ +
Sbjct: 117 IDSKARGIASIYRGELVDFYTNIKGGLGIFTDQELVQKIVRERFGENTGDALAKKISDKM 176
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
+ + + + G D +N +PQ +++K+ K+ +V +D +Y +
Sbjct: 177 GDVFETMRDRFNRNGGDIGKLDNWGLPQTHNLEKIAKAGKEAWVNKAESLIDTRQYVHEN 236
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK------DPSIPSSEVGVKREFERVFHFKDSQAH 284
G S+ EI S + + + K +S+V + RV HFKD+++
Sbjct: 237 GDYYSQQEIRSLLEYTYDTLSSDGANKIEVGRQATGGGTSKVTNRHGESRVLHFKDAESW 296
Query: 285 MDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGN 344
++Y FG V ++ + + LSKDI + LG N + +K ++ D E
Sbjct: 297 LEYQSEFGGMQFV-DLVEAHINGLSKDIAMVENLGSNPKTALKILMDAAAKKDWEK---- 351
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
+ NK + ++ M++ G T ++ AN RS ASMLG I +
Sbjct: 352 -----GIDENKTQSSRKRAQVMFDEFSGGNTPQSQVLANLGIAYRSMNVASMLGGTTIAS 406
Query: 405 LLEDGFISRQM----LSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMME 460
L + I++ LS ++++N +R E +GL E ++ G
Sbjct: 407 LADQATIAKTAHVHNLSYRKAFGGIVEQLNPANKADR-EFAHGLGLATEEML--GSIARW 463
Query: 461 GSDAFQIGHKLHSKMHKWSGAEYLDKKRIS-SHALIVYNQIG---RMTDTYASLKDLKAD 516
D + K+ + S R+S +AL +++G + + Y L KA
Sbjct: 464 SDDGLTSTYGKSEKLARISSGVATQVMRVSFLNALTSASKVGFTKLLMEKYGRLSRSKAW 523
Query: 517 PRLDPSIKAFFK--QLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMS 574
LD + LD+ + V + A+ + G + +I + D L
Sbjct: 524 NELDVQDRELLSNTGLDERAWQVFQLAEPVVDRKGNQLM-SARSIYEIPDEKLTAFG--- 579
Query: 575 DKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVR 634
P+Q +KD+V++++ A +LD +V
Sbjct: 580 ----------------DPKQ------------------VKDQVASQLQAHLLDEQGMAVI 605
Query: 635 GAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASM 694
A R+R + +GT GE + QF + + + + + KG +
Sbjct: 606 EA-----GLRERTWMTVGAKGTITGEVFKGLMQFKSFSASFLMRQGSRAMAQEGLKGKA- 659
Query: 695 ALNHVWIQYSATMALAGIGVASIKALLRGEDPS------LPE----VIYDGTLANGALLP 744
I +M L G V ++ +L G DP P+ +A G L
Sbjct: 660 ---AYAIPLMVSMTLLGGLVVQLREILNGNDPQTIYDSNDPKKATSFFMRSLVAGGGLPV 716
Query: 745 YMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVN----ATKAIRK 800
D L R A + GP+ S T L V T+ NE N A K ++
Sbjct: 717 LGDILVAGTDTSGRDANSFVSGPLGSDFTALLGLTVGNLTQYNEGKDTNFGNEAFKFVKG 776
Query: 801 TLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK-KGIELFQNMDEGLPHRLP 858
+P N+WY K + + + +++ + + PGY ++ K ++ + E F D+ R P
Sbjct: 777 KIPAQNLWYTKAAINRMFFDEVQDTIAPGYREKALRKAERQQDRERFWG-DDINDIRAP 834
>gi|260548934|ref|ZP_05823156.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260408102|gb|EEX01573.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 841
Score = 616 bits (1588), Expect = e-174, Method: Composition-based stats.
Identities = 190/899 (21%), Positives = 345/899 (38%), Gaps = 106/899 (11%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSLD------GKGLSKAERYRLAGLK 53
MK +C Q + KA G++ LS +E ++E I A ++ + LS +E+ A +
Sbjct: 1 MKEQCKQAVAKALGKQSLSAQEAIKIESRINEAMRNMARKDIDKWRNLSDSEKLIEASKQ 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVP 111
D Q++L R A ++ + + + LD + + + +++ G S
Sbjct: 61 VAIDIQEQLKRKHKIAANDILTQSKNLAKLDHTRL----LASEVVDRMVAPHGDMSGIQS 116
Query: 112 LEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
+ K + ++ LG DK+ + E + T + A ++ +
Sbjct: 117 ISSKADGIADIYEGELVDFYTNIKGGLGIFTDKELVHKIVRERFNENTGDPLAKKISNKM 176
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
+ + + + +G D +N +PQ +++K+ K +V +D +Y +
Sbjct: 177 GDVFETMRDRFNRSGGDIGMLDNWGLPQTHNLEKIAKAGKKAWVNKAESLIDTRQYVHEN 236
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK------DPSIPSSEVGVKREFERVFHFKDSQAH 284
G S+ EI S + + + K +S+V K RV HFKD+++
Sbjct: 237 GDYYSQQEIRSLLEYTYDTLSSDGANKIEVGRQATGAGTSKVTNKHSESRVLHFKDAESW 296
Query: 285 MDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGN 344
++Y FG V ++ + + LSKDI + LG N + K + + A+ ++ AG
Sbjct: 297 LEYQSDFGGMQFV-DLVNAHIKGLSKDIALVENLGSNPKTAFKIL--KNAADKKDREAGR 353
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
KD N+ +V M++ G + ++ AN RS SMLG + +
Sbjct: 354 ITTKDNPALNRAQV-------MFDEFSGGNSPQSQVLANLGIAYRSMNIFSMLGGTTVVS 406
Query: 405 LLEDGFISRQM----LSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMME 460
+ I++ LS E I+++N +R EL +GL E ++ G
Sbjct: 407 TTDQATIAKTAHVHGLSYRKAFGELIRQLNPANKADR-ELAHSLGLATEEML--GSIARW 463
Query: 461 GSDAFQIGHKLHSKMHKWSGAEYLDKKRIS-SHALIVYNQIG---RMTDTYASLKDLKAD 516
D H K+ + S R+S +AL +++G + + Y L KA
Sbjct: 464 SDDGLTSTHGKSEKLARISSGVASLVMRVSLLNALTAASKVGFTKLLMEKYGRLSRSKAW 523
Query: 517 PRLDPSIKAFFK--QLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMS 574
LD + LD+ + V + A+ + G + +I + D L
Sbjct: 524 GDLDIQDRELLSNTGLDERAWQVFQLAEPVVDRKGNQLM-SARSIYEIPDEKLAAFG--- 579
Query: 575 DKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVR 634
P+Q +KD+V++++ A +LD +V
Sbjct: 580 ----------------DPKQ------------------VKDQVASQLQAHLLDEQGMAVI 605
Query: 635 GAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASM 694
A R++ + RGT GE R QF + + + + + KG +
Sbjct: 606 EA-----GLREKTLINVGARGTITGEIFRGIVQFKSFSAAFLMRHGSRTMAQEGLKGKA- 659
Query: 695 ALNHVWIQYSATMALAGIGVASIKALLRGEDPS------LPE----VIYDGTLANGALLP 744
I L G V +K LL G DP P+ + G L
Sbjct: 660 ---AYAIPLFVMTTLLGGLVVQLKELLNGNDPQTIYDSNDPKKASNFFVRSAVQGGGLSF 716
Query: 745 YMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVN----ATKAIRK 800
D L R A + GP+ S +L S V T+ NE N A + +++
Sbjct: 717 LGDILVAGTDTSGRDAHSFVAGPLGSDFESLLSLTVGNLTQYNEGKDTNFGNEAFQFVKR 776
Query: 801 TLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKK-KKKGIELFQNMDEGLPHRLP 858
+P N+WY K + + ++ ++I + + PGY ++ K +K+ E F D+ R P
Sbjct: 777 KIPAQNLWYTKAAINRMVFDEIQDFIAPGYREKALRKAEEKQDRERFWG-DDINDIRAP 834
>gi|332160979|ref|YP_004297556.1| hypothetical protein YE105_C1357 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665209|gb|ADZ41853.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862135|emb|CBX72299.1| hypothetical protein YEW_AK02360 [Yersinia enterocolitica W22703]
Length = 841
Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats.
Identities = 180/893 (20%), Positives = 340/893 (38%), Gaps = 95/893 (10%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLD-----GKGLSKAERYRLAGLKAE 55
M+ ECIQ + A GR +++ E++ +E+ I + + L +SKA+R R A A
Sbjct: 1 MRAECIQAVVNAIGRSITQAEVKGIENRINQHHKRLAQDTPGWMAMSKADRLREAAKSAA 60
Query: 56 EDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPLE 113
++ +E +++ + V++ AL + F + S + +E
Sbjct: 61 DEITREAKLKKWRTALTILAHDRVK---NYVESSTDTPVNALGRLIAFDSDQKSGVLSVE 117
Query: 114 MKIKAAETKVLSKFNEYAEVGS-KNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYF 172
+ KA S+ + K L D + V E+ G+ + N A + K++
Sbjct: 118 SQAKAIRDIAYSQMLTLIDTTKGKFLSLLSDPESSKAVIKELHGEHSGNAAAKQSAKEFK 177
Query: 173 ETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDG 231
+ L + + +G E+ +P+ S K+ A ++ +V + W D Y + DG
Sbjct: 178 DVAEFLRQRFNNSGGAIGRLESWAMPRSHSQLKV-AKNREAWVDDHVKWADRRSYVNEDG 236
Query: 232 TPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREF-----ERVFHFKDSQAHMD 286
+ +S +++ F A R +T + P +G R H+KD+ + +
Sbjct: 237 SRMSDAQLREFF--THAARTIATGGINKVEPGRFIGGSLRANHGSESRSIHYKDADSFIL 294
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKV 346
+ +G ++ +LT + L++DI + LGPN+D + + + A
Sbjct: 295 AQQKYG-DKDLLALLTGHIDRLARDIALTETLGPNSDLQFRTQMDMAQQSMINA------ 347
Query: 347 LKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGW-ANWMAGLRSAAGASMLGQHPIGAL 405
+ K+E + ++++ + + T W RS AS LG I A+
Sbjct: 348 --EPAKFKKIESEMLRVERLYKDVAGQNDIPETPWLKEAFDTYRSINVASKLGSAAITAI 405
Query: 406 LEDGFISRQM-LSRVGIDKEAIQRINKMPLKE--RMELLSDVGLYAEGVVAHGRNMMEGS 462
+ G + ++ + + + Q + + + E GL + + +
Sbjct: 406 TDQGNLMVTAKVNNLPVMQVFAQELKLLNPADSASREAARRAGLGINYYLNGLQRFGAET 465
Query: 463 DA---------FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL 513
K+ + + SG + + +++ + IG MT +A+L L
Sbjct: 466 LGSAGDTSGALSSSAQKIAGFVLRASGLNAMTAAGNQAFGMVMLDTIGGMTRKHANLAHL 525
Query: 514 KADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARM 573
A R + + + D+ V ++A D+ DL+ M
Sbjct: 526 NAKDRT----RLQGMGVTEADWAVWRKA------------------------DVSDLSGM 557
Query: 574 SDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSV 633
D + H + L LS L +Q A K L++ + K+ +V D Q +V
Sbjct: 558 GDTVLTHNEILA----LSDSALTPLAKQFATTPAK----LRNTAATKLLGVVQDEAQMAV 609
Query: 634 RGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGAS 693
+ RGT +GE R QF + P M + + + GA
Sbjct: 610 ----VEPGARERVTLHRGTTRGTWSGEIWRSATQFKSFPIAMVMRHAHRALAQ---DGAG 662
Query: 694 MALNHVWIQYSATMALAGIGVASIKALLRGEDPSL---PEVIYDGTLANGALLPYMDRLT 750
I A L G + + G DP PE L GAL Y D L
Sbjct: 663 KGTYAAAI--IAASTLLGGMAIQLNEIASGRDPRDMTKPEFWGGAFLKGGALGLYGDFLL 720
Query: 751 KLVSKGDRAAIGGLLGPVPSMVTNLT----SSAVELATKDNENSKVNATKAIRKTLPFMN 806
++G + I + GP+ + ++ +A + + ++ N + I+ P N
Sbjct: 721 TNQTQGGNSFIASIGGPLAGDIESVVKMTQGAAFKAIDGKDPHTAANVVRFIKGHTPGAN 780
Query: 807 MWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
+WY K + DH+I + I E+ +PGYL R + + +K+ + + E P R P
Sbjct: 781 LWYAKAALDHMIFHDIQEQFSPGYLSRMRQRAQKEYDQQFWWAPGETAPDRAP 833
>gi|294648411|ref|ZP_06725910.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825716|gb|EFF84420.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
Length = 854
Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats.
Identities = 164/894 (18%), Positives = 335/894 (37%), Gaps = 91/894 (10%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLD------GKGLSKAERYRLAGLKA 54
MK EC + GR+L+ KE LE ++A L K +S ER +A
Sbjct: 1 MKNECRAAVEGVLGRKLTDKEADLLEQQFIKASRELPQEDIKAWKSMSDEERAEAIADRA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKL-FFKAGSAEVPLE 113
+++ + I+ V + I++ R L +L +AL KL F S +E
Sbjct: 61 IKNYTDQHIKEVTNLINDLEIREALEHEL--TSHSKLNPLEALNRKLVMFTDQSGIQSVE 118
Query: 114 MKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
I+A E + + + K LG+ +D + E+ GK + + + + L K +
Sbjct: 119 HNIQAIEVRYMGALADVFSKTQKGLGYLIDADKVKLLVKEIFGKPSGDAEIAGLAKSVQD 178
Query: 174 TQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGT 232
+L + G D K N IPQ S K+ + +++++ +D S+Y+ +G
Sbjct: 179 VLEQLRQHYNRYGGDIKKLANYGIPQSHSHYKVIQAGEGEWIKTTFPMVDKSKYRHENGK 238
Query: 233 PLSRSEIASFVGEVFAERVRSTSFKDPSIP-----------SSEVGVKREFERVFHFKDS 281
++ +E+ + V+ K + + R HFKD
Sbjct: 239 LMNDAEVKEVLKAVYQTIASEGHNKASVQAHAVQSETDLPVGMNMQALHQHHREVHFKDP 298
Query: 282 QAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEAS 341
+ + Y E FG N + +L++ + +S +I + + G N + VKQ+ + +
Sbjct: 299 DSWVAYQEQFG-EVNFHDLLSNHIRRMSTEIGMMQTFGSNPEKLVKQLGHDLL------N 351
Query: 342 AGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHP 401
+ K K++ + + + + ++ + ++ A LRS A+ +G
Sbjct: 352 KMMQDPKYVKDHRKIQKQAKLINKHYDELAGQALPVDSSLAQVGGMLRSWTVATKMGSAF 411
Query: 402 IGALLEDGFISRQMLSR-VGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMME 460
I A + + + K + + + KE + +GL + +
Sbjct: 412 ITAFSDQATMKLASEMHGIAYTKVFGKHLKQFKNKEDRDFAISIGLGVREMTNALVRFGD 471
Query: 461 GSDAFQIG---------HKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLK 511
A K+ + + + SG ++ + + + + ++L
Sbjct: 472 DDLASASTKLASANTKTRKVANAVIRASGLNHITASAKRAFGASLMHHV-------SNLN 524
Query: 512 DLKADPRLDPSIKAFF--KQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRD 569
KA +L K + + D+T++K+ +P G T I N D D
Sbjct: 525 SGKAWDQLGTQDKKMLEGGGIKEDDWTLLKQIDRTEAPSG-EKLVTNKDIFNASDDLFLD 583
Query: 570 LARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNV 629
++ ++ Q+L+D+ LK++++NK +
Sbjct: 584 TFQV-------------------DKTGYTAQELSDIAF----RLKEQLANKYMNYIYTET 620
Query: 630 QTSVR--GAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAK 687
+V GA ++ R +RGT E R F QF P M + +
Sbjct: 621 NAAVLEVGARESTFMGLGR------ERGTVGNELSRFFWQFKQFPLAMIMRQWTRGMAQG 674
Query: 688 MPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVI--YDGTLANGALLPY 745
P+ + + A + G V+ I+ L +G+D P + Y ++ G +
Sbjct: 675 TPQEKF----VYFAKLFAYTTVMGALVSQIQNLTQGKDLDDPTTLDFYMKSIVKGGSASF 730
Query: 746 MDRLTKLVSKGDRAAIGGLLGP-----VPSMVTNLTSSAVELATKDNENSKVNATKAIRK 800
+ S ++ + P + S+ T ++ + T+ + + A ++
Sbjct: 731 LADAISATSDPTERSVKDFIIPAAFKDITSIGTMVSGAGSAFITERDSSYGAEAVNVVKN 790
Query: 801 TLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGI-ELFQNMDEGL 853
+PF N+WY + FD L++ ++ E + GY +R+Q +++ + ++D
Sbjct: 791 NIPFQNLWYSRLVFDRLVIAEMQELFDEGYRERKQRRQENNHNMSYWWDLDNDS 844
>gi|262371858|ref|ZP_06065137.1| predicted protein [Acinetobacter junii SH205]
gi|262311883|gb|EEY92968.1| predicted protein [Acinetobacter junii SH205]
Length = 841
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 156/892 (17%), Positives = 314/892 (35%), Gaps = 92/892 (10%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSL-----DGKGLSKAERYRLAGLKA 54
M+ EC + + KA G++ L+ + R+ +RA +L D S AER K
Sbjct: 1 MRAECREQVAKALGKKRLNAADSNRISSLYIRAQNTLARTDPDWMFKSPAERAEAIAQKT 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKL-FFKAGSAEVPLE 113
D ++ ++ + +A + QL++++ QAL K+ +F S +E
Sbjct: 61 ASDLAVQIAKNNQNIARDAVIKAQLQTEI--YNHPKLNPVQALMRKIAYFSDQSGIQSIE 118
Query: 114 MKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
+ +A ++ +S + + G +++K D+ M G K+ N + + + K+
Sbjct: 119 KQSQALHSRWMSLVADVFTKTQERFGMSVNKAMTDDIIRVMFGGKSDNPEITAMAKEVSA 178
Query: 174 TQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGT 232
E+ + AG + K +N K+ T + ++V LD LD ++Y G
Sbjct: 179 ALEEMRLAFNRAGGNIKKLDNFGFMTSHDQKKVALTNQAEWVNDALDGLDRNQYVKDTGE 238
Query: 233 PLSRSEIASFVGEVFAERVRSTSFKD-------------PSIPSSEVGVKREFERVFHFK 279
+ E+ S + +++ + + KD P S++ + + R HFK
Sbjct: 239 LMDELELKSMLEDIYKTISTNGANKDLLVLNKQAKAGVSPVGGRSKMANRHQEARALHFK 298
Query: 280 DSQAHMDYMEHFGV--STNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAND 337
D A + Y + +G + IL + +S ++ + + LG N + ++ +
Sbjct: 299 DGDAWLAYQKKYGTYDEAGFHEILKNHTQRMSTEVAMMQNLGSNPRHTFESLLDEAKIKL 358
Query: 338 QEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASML 397
+ L +++ + L M+ + ++ N M GLR+ AS L
Sbjct: 359 KADPLNG------LKHGEIDKQAHRALSMYNTLDANTRAIDSTLGNVMGGLRALMVASKL 412
Query: 398 GQHPIGALLEDGFISR--QMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHG 455
G + + + + ML + + ++ + GL +
Sbjct: 413 GGTTLTTFGDHASMKKVANMLGLSYTKSILPEYMKQLKQGATRDEALRFGLGINEMAGSM 472
Query: 456 RNMMEGSDAFQIGHK---------LHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDT 506
+ + K SG + + L+ N++ MT
Sbjct: 473 TRFGDADIVSSATKSGRFNARMQAFAAMTMKLSGLNAVTAGAKRALNLVHMNKLAEMTRK 532
Query: 507 YASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDAD 566
KDL AD + + D+ + ++ + DG T + N+ D
Sbjct: 533 T-DWKDLGADDLKILKGN----GITERDWQLWQQLEPSKREDGTA-VLTQNDFFNVPDDV 586
Query: 567 LRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVL 626
++ PE +Q+ LAD + K + K +
Sbjct: 587 IKKFL--------------------PEDKQDNANALADF--------RYKAAMKYQTHLF 618
Query: 627 DNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSA 686
+ ++ A R+R + + GT GE R QF P + + +
Sbjct: 619 NEESVAIIEA-----GVRERSIINLGEAGTIQGELGRTLFQFKGFPLAYMFRMGHRAFA- 672
Query: 687 KMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLP---EVIYDGTLANGALL 743
+G + A LAG + + L G++P + L G L
Sbjct: 673 ---QGDIKSRVTFLASLLAYQTLAGALIVQTQNLANGKNPEPVFTIDFFGKSLLKGGGLS 729
Query: 744 PYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVEL----ATKDNENSKVNATKAIR 799
D ++ L R+A + GP+ L + + ++
Sbjct: 730 FLGDIMSALSDPTGRSASDFISGPLLGQSMKLGMLLTGMGNNIIEGKESTRMMEVANTLK 789
Query: 800 KTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDE 851
+P N+WY K D ++ +++ ++P YL R Q + + G + ++ E
Sbjct: 790 SNIPLQNLWYSKLVVDRMLYSKMQNMIDPDYLPRTQQRLENLGNSYWWDLSE 841
>gi|226953662|ref|ZP_03824126.1| phage related protein [Acinetobacter sp. ATCC 27244]
gi|226835534|gb|EEH67917.1| phage related protein [Acinetobacter sp. ATCC 27244]
Length = 842
Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats.
Identities = 148/893 (16%), Positives = 308/893 (34%), Gaps = 92/893 (10%)
Query: 1 MKPECIQVLNKAAG-RELSKKELRRLEDGIVRAYVSL-----DGKGLSKAERYRLAGLKA 54
M+ EC + + KA G R+LS + R+ +RA +L D S AER K
Sbjct: 1 MRAECREQVAKALGKRKLSAADSNRISSLYIRAQNTLARTDPDWMFKSPAERAEAIAQKT 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKL-FFKAGSAEVPLE 113
D ++ ++ + +A + QL++++ QAL K+ +F S +E
Sbjct: 61 ATDLAVQIAKNNQNIARDAIIKAQLQNEI--YNHPKLNPVQALMRKIAYFSDQSGIQSIE 118
Query: 114 MKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
+ +A ++ +S + + G +++K D+ M G K+ N + + + K+
Sbjct: 119 KQSQALHSRWMSLVADVFTKTQERFGMSVNKAMTDDIIRVMFGGKSDNPEITAMAKEVSA 178
Query: 174 TQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGT 232
E+ + AG + K +N K+ T + ++V L +D ++Y G
Sbjct: 179 ALEEMRLAFNRAGGNIKKLDNFGFMTSHDQKKVALTDQSEWVNDALAGVDRNQYVKETGE 238
Query: 233 PLSRSEIASFVGEVFAERVRSTSFKD-------------PSIPSSEVGVKREFERVFHFK 279
+ E+ S + E++ + + KD P S++ + + R HFK
Sbjct: 239 LMDELELKSMLEEIYKTISTNGANKDLLILNKQAKAGASPVGGRSKMANRHQESRALHFK 298
Query: 280 DSQAHMDYMEHFGV--STNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAND 337
D A + Y + +G + IL + +S ++ + + LG N + + ++ +
Sbjct: 299 DGDAWLAYQKKYGTYDEAGFHEILKNHTHRMSTEVAMMQNLGSNPRNTFESLLDEAKIKL 358
Query: 338 QEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASML 397
+ + +++ + + M+ + ++ N M GLR+ AS L
Sbjct: 359 KADPQNG------MKHGEIDKQAHRAMSMYNTLDANTRAIDSTLGNVMGGLRALMVASKL 412
Query: 398 GQHPIGALLEDGFISR--QMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHG 455
G + + + + ML + + ++ + GL +
Sbjct: 413 GGTTLTTFGDHASMKKVANMLGLSYTKSILPEYMKQLKQGATRDEALRFGLGINEMAGSM 472
Query: 456 RNMMEGSDAFQIGHK---------LHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDT 506
+ + K SG + + L+ N++ MT
Sbjct: 473 TRFGDADIVSSATKSGRFNARMQAFAATTMKLSGLNAVTAGAKRALNLVHMNKLAEMTRK 532
Query: 507 YASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDAD 566
+DL AD + + D+ + ++ + DG + + N D
Sbjct: 533 T-DWQDLGADDLKILQGN----GITERDWQLWQQLEPSKREDGTA-VLSQNDFFNAPDDV 586
Query: 567 LRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVL 626
++ + + + + K + K +
Sbjct: 587 IKQFLPLDKQD----------------------------NANALADFRYKAAMKYQTHIF 618
Query: 627 DNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSA 686
+ ++ A R+R + + GT GE R QF P I + +
Sbjct: 619 NEESVAIIEA-----GVRERSIINLGEAGTIQGELGRTLFQFKGFPLAYMFRIGHRAFA- 672
Query: 687 KMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLP---EVIYDGTLANGALL 743
+G + A LAG + + L G++P + L G L
Sbjct: 673 ---QGDIKSRVTFLASLLAYQTLAGALIVQTQNLANGKNPEPVFTIDFFGKSLLKGGGLS 729
Query: 744 PYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVEL----ATKDNENSKVNATKAIR 799
D ++ L R+A + GP+ L + + ++
Sbjct: 730 FLGDIMSALSDPTGRSASDFISGPLLGQSMKLGMLLTGMGNNIIEGKESTRMMEVANTLK 789
Query: 800 KTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEG 852
+P N+WY K D ++ +++ ++P YL R Q + + G + ++ E
Sbjct: 790 SNIPLQNLWYSKLVVDRMLYSKMQNMIDPDYLPRTQQRLENLGNSYWWDLSEE 842
>gi|320175029|gb|EFW50142.1| 17 [Shigella dysenteriae CDC 74-1112]
Length = 582
Score = 486 bits (1249), Expect = e-134, Method: Composition-based stats.
Identities = 126/640 (19%), Positives = 235/640 (36%), Gaps = 76/640 (11%)
Query: 234 LSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDYMEH 290
++ +E+++F+GE + K D + S R R HFKD+ +++ Y +
Sbjct: 1 MNDAELSAFLGEAYNTIATGGLNKLTDTGMRISGARANRGNASRQIHFKDADSYLQYQQL 60
Query: 291 FGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDW 350
+G ++ I+ L +SKDI + GPN D + ++ Q A A+ +
Sbjct: 61 YG-DRSLWEIMVGHLEGISKDIALVETYGPNPDHVFRSLLDQVKAETATANPSKTGKVE- 118
Query: 351 LGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGF 410
+L E + + + V N A W +R+ AS LG + + + G
Sbjct: 119 ----RLANNTENLYNF--ISGKTQPVANPHIARWSDNIRNWLVASRLGSALLSSFSDLGT 172
Query: 411 IS-RQMLSRVGIDKEAIQRINKMPLKERMELLSD--VGLYAEGVVAHGRNMMEGSDAFQI 467
+ ++ + +++ ++ M R EL GL E ++ + +
Sbjct: 173 MYLSAKVTNLPMNQLFRNQLEAMDPTNRTELARARRAGLAMESLLGSVNRWAMDNMGPSV 232
Query: 468 GHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK-ADPRLDPSIKAF 526
+ + + SG ++ + + +G + L+ L +D R+ S
Sbjct: 233 SRWAATAVMRASGLTAWSDAHKRAYGVTMMGSLGEVVSRTPDLRSLDDSDFRILKS---- 288
Query: 527 FKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKN 586
K + DTD++V K A+ +G TP +I + D ++ L
Sbjct: 289 -KGITDTDWSVWKLAQQEDWGNGNNTMLTPESIMRIPDLAVKHLG--------------- 332
Query: 587 SKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQR 646
E +K + K+ V + V +V T Q
Sbjct: 333 ----------------------EPERVKFEAMRKLLGAVTEEVDMAV----ITPGAREQL 366
Query: 647 LGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSAT 706
+ +RGT GE R F + P + + + MP A + A+
Sbjct: 367 ITGSGIQRGTWKGELTRSVFLFKSFPISVVMRHWSR--AMGMPSAGGRAAYIAT--FIAS 422
Query: 707 MALAGIGVASIKALLRGEDPSL------PEVIYDGTLANGALLPYMDRLTKLVSKGDRAA 760
+ G + L G +P + L G L Y D L ++ A
Sbjct: 423 TTILGALSQQLNDLASGRNPREMTGEDAAKFWLGALLKGGGLGLYGDFLLSDHTRYGSGA 482
Query: 761 IGGLLGPVPSMVTNLTSSA----VELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDH 816
+ + GPV +V ++ A + NE + + K + +P N+WYLK + DH
Sbjct: 483 LASMFGPVAGLVDDVVKIAQGIPLNAVEGKNEQTGGDLVKLGKGLMPGANLWYLKAALDH 542
Query: 817 LILNQILEELNPGYLDRQQSKKKKKGIE-LFQNMDEGLPH 855
+I NQ+ E +PGYL + + + KK+ + + + P
Sbjct: 543 MIFNQMQEYFSPGYLRKMEQRSKKEFNQTYWWRPQDVTPQ 582
>gi|298485996|ref|ZP_07004070.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159473|gb|EFI00520.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 831
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 148/886 (16%), Positives = 298/886 (33%), Gaps = 94/886 (10%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK 60
M C + + +A GR L K E + D I S + L++ + + + ++
Sbjct: 3 MSANCKREVEQAIGRPLKKSEADAINDKI-----SFHIRDLARTDPTKFNAMTEQQRQLA 57
Query: 61 ELIRSVNDAIDEAYKRHQLRS----------DLDRVQAGVYGKSQALFNKLFFKAGSAEV 110
++ D + + K+ Q + D +A V G Q + LF + +
Sbjct: 58 GAQAAMADHMADVAKKAQRKGLNLLAQTRELDNQTARAAVLGGKQPFTSALFERLRQVDT 117
Query: 111 PLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQ 170
++ + A T ++ + K +G +K D E+ G+ + N A K
Sbjct: 118 RIKGERNRAFTSIM---DTIMAAEPKFMGLITNKAVERDFVHEVFGQDSGNAIAKNAAKV 174
Query: 171 YFETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ + + + + AG D + +PQP S+ K+R ++ +L LD RY +
Sbjct: 175 WRDQMDSIRERQNAAGADIGRLDYGWLPQPHSLVKVRRAAPQEWASFVLGRLDRRRYLNE 234
Query: 230 DGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKR-----EFERVFHFKDSQAH 284
DGT ++ ++ F+ T + P + G R R HFKD ++
Sbjct: 235 DGTQMNDGQVTDFLLAAHET--LRTDGLNKMTPGTGNGSSRAAKHDNAHRQIHFKDGDSY 292
Query: 285 MDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGN 344
++YM FG T+V + + + KD V+ +LGPNA + + D S
Sbjct: 293 LEYMRDFG-PTSVFEAMNGSVHAQIKDTVLTEQLGPNAAQTYRLLHDTAKQKDAGGSGAF 351
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVM-RYGETVENTGWANWMAGLRSAAGASMLGQHPIG 403
+ + + W V+ N +A + G+R+ A+ L I
Sbjct: 352 AGTEFGATPDMV----------WNVLNGSLGVPVNARFAEFNQGIRNFMVAAKLQATLIA 401
Query: 404 ALLEDGFISRQMLSRVGIDKEAIQRINKMP--LKERMELLSDVGLYAEGVVAHGRNMMEG 461
+++ D S + S ++ + K+ + + + + + +
Sbjct: 402 SVIGD-VQSLAITSAYHGLPIGKTLVSALKSVSKDYRTEAGRMSIGMDSITSDMVSFHTD 460
Query: 462 SDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDP 521
+ + KL + K + E ++ + +++ T
Sbjct: 461 NLSAGWTSKLANATMKVTLLEGWTNAMRRGFSVEIMSRMAGDTRKAWG-------DDPVL 513
Query: 522 SIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHR 581
+ + D+ V + A TP ++ ++K
Sbjct: 514 QSRLERHGITQDDWAVWQAATPEDWR--GHQMLTPESVASMK------------------ 553
Query: 582 KKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSL 641
S +Q+ + +L ++E A +
Sbjct: 554 -------GFSAKQKNDAIGKLLGYIQEESEFTSILPGIMTRATLXXXXXXXXXXXXXXXX 606
Query: 642 FDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWI 701
F + MF + + G V+
Sbjct: 607 XXXXXXXXXXXX------XXXXXXXXFKSFGLAMFERHWKRVSQIESTGGKLAYSASVF- 659
Query: 702 QYSATMALAGIGVASIKALLRGEDPS---LPEVIYDGTLANGALLPYMDRL---TKLVSK 755
+ +AG + ++ G DP + L G + + D L ++
Sbjct: 660 ---TGLLMAGAMTNQLMDIMNGRDPRDMKDGKFWLQAMLRGGGVGIFGDILNTGLGGDNR 716
Query: 756 GDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENS--KVNATKAIRKTLPFMNMWYLKNS 813
G ++ + GLLGPV ++ + + + E + N + + PF+ WY K +
Sbjct: 717 GGQSNLTGLLGPVYGTAADVGLTLGSVFKEKTEPADVGANLLRIGYQNTPFIRSWYTKAA 776
Query: 814 FDHLILNQILEELNPGYLDRQQSKKKKKGIEL-FQNMDEGLPHRLP 858
F+H +++ + E L+PGYL R + + KK + + E P R P
Sbjct: 777 FEHAVMHDMQEMLSPGYLSRMKKRAKKDFNQRFWWEPGETAPSRAP 822
>gi|221213942|ref|ZP_03586915.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221166119|gb|EED98592.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 864
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 174/936 (18%), Positives = 315/936 (33%), Gaps = 159/936 (16%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGI---VRAYVSLD---GKGLSKAERYRLAGLKA 54
M +C+ + AAGR+L++ E+ +E+ + +RA D +S+A+R A
Sbjct: 1 MHQKCVNAVEAAAGRKLTQAEIDGIENRVRAGMRATARQDPVGWSAMSQADRVAAGAEWA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDL---DRVQAGVYGKSQALFNKLFFKAGSAEVP 111
+ + E +D A K+ Q+ + DR+Q +Y + K + +
Sbjct: 61 RKQLEHEA------DLDRARKQLQIAKQIETTDRIQEALYADPENAHRKRA-RETIVKQD 113
Query: 112 LE------MKIKAAETKVLSKFNEYAEVGSKNLGFTLD---KQFGLDVFDEMK-GKK--T 159
+E IK+ + + + G L D D+ E+ G T
Sbjct: 114 IEQTYVLAGAIKSDYMRQTMGAIDAMKAGQNFLARAFDVDNPAMERDIIREVYHGADGST 173
Query: 160 QNEQASRLVKQYFETQRELHSQAHEAGL-----DYKFFENRIPQPMSVDKLRATKKDDFV 214
NE A +Q +T + + + AG DY + R Q + + +
Sbjct: 174 GNEVAKAAAEQISKTTAAMRERFNRAGGNVGELDYGYVPIRHSQSKVLGNGSDAARHAWA 233
Query: 215 RSMLDWLDLSRYKDIDGTPLSRSEIASFV-GEVFAERVRSTSFKDPSIPSSEVGVKR--- 270
+++ LD S+Y D G PL+ +++ + GE R+ + +I + GV
Sbjct: 234 DAVMPLLDRSQYLDDAGNPLNDADLRKMLVGEDREPWERANAAARGNIAPRKQGVWDTIA 293
Query: 271 ----------------------EFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASL 308
RV HF+D+ AH+ Y +G + +N ++ + +
Sbjct: 294 YGGVNKIVPGETTGSAARANAGSAHRVLHFRDADAHIQYNRQYGEGSLLNALV-DHVGGM 352
Query: 309 SKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWE 368
+K+I + GPN +K + T +D LE ++ W
Sbjct: 353 AKNIALVERYGPNPTRNMKTQMQLTAVHDGT------------EMRTLEGGMTSIGAYWN 400
Query: 369 -VMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFI-SRQMLSRVGIDKEA- 425
V T N A M LR+ A L + AL + G + ++V K
Sbjct: 401 YVTGTTNTPVNPALARKMETLRTTVSAVKLQGTILAALGDVGTMFVTAGYNKVPFFKTLG 460
Query: 426 -IQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYL 484
R+ K+ LS GL AE + + A L + K+ G
Sbjct: 461 TAARLMAPGSKDFRAWLSSQGLIAESLEHGLNRWGTDNLATTWARNLSAATMKFGGVTGW 520
Query: 485 DKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAM 544
++ + + + T L R + + D+ V+ +A
Sbjct: 521 TDALRTAFQSHMMRGLAGIGRT--DWNSLTEWDRRALTR----AGITADDWAVVNKATPG 574
Query: 545 SSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLAD 604
D TP + DA + A+
Sbjct: 575 RYGDAEY--LTPDALYATGDA-----------------------------------RAAN 597
Query: 605 LERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRM 664
+ K + +++++ + D + + + GT GE +
Sbjct: 598 VVPKLLGMIREEGEFAVLN------------------PDLRTKVIASATPGTAMGELKKT 639
Query: 665 FQQFTTTPTGMFLNILDL----SNSAKMPKGASMALNHVWIQYSA---TMALAGIGVASI 717
F QF + P M S + AL + +A + L G +
Sbjct: 640 FMQFKSFPIAMISRHWGRIGDMRRSGDFRVDGAPALANPMAYAAALVVSTTLIGAISTQV 699
Query: 718 KALLRGEDPSL--------PEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGG--LLGP 767
K LL G+DP G D LT D ++ G + GP
Sbjct: 700 KNLLAGKDPEPMFDDVKHAAGFWTRAFSVGGGAGFAGDMLTASFESTDYGSLLGSVVGGP 759
Query: 768 VPSM----VTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQIL 823
+PS V +S+A + A + + + K + P +N+W+ K ++ LI + +
Sbjct: 760 LPSTIYQVVRAFSSNAQDAAQGKDTHVSADLLKVAQSNTPLVNLWFWKTVWNRLIWDNLA 819
Query: 824 EELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
E L+PG R ++ + + + F + G P R P
Sbjct: 820 ENLSPGVTQRNINRSRNQYHNDYFWSPGTGSPQRAP 855
>gi|48697207|ref|YP_024937.1| hypothetical protein BcepC6B_gp17 [Burkholderia phage BcepC6B]
gi|47779013|gb|AAT38376.1| gp17 [Burkholderia phage BcepC6B]
Length = 864
Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 170/935 (18%), Positives = 306/935 (32%), Gaps = 157/935 (16%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLD------GKGLSKAERYRLAGLKA 54
M +C+ + AAGR+L++ E+ +E+ + S +S+A+R A
Sbjct: 1 MHQKCVNAVETAAGRKLTQAEIDGIENRVRAGMRSTARQDPAGWSAMSQADRVAAGAEWA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDL---DRVQAGVYGKSQALFNK-----LFFKAG 106
+ E +D A K+ Q+ + DR+Q +Y + K +
Sbjct: 61 RQQLVHEA------DLDRARKQLQIAKQIETTDRIQEALYADPENAHRKRARETIVKHDI 114
Query: 107 SAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLD---KQFGLDVFDEM-KGKK--TQ 160
IK+ + + +VG L D D+ E+ +G T
Sbjct: 115 EQTYVTAGAIKSDYMRQTMGAIDAMKVGQNFLARAFDVDNPAMERDIIREVYRGADGSTG 174
Query: 161 NEQASRLVKQYFETQRELHSQAHEAGL-----DYKFFENRIPQPMSVDKLRATKKDDFVR 215
NE A +Q +T + + + AG DY + R Q + ++ +
Sbjct: 175 NEVAKAAAEQIGKTTGAMRERFNRAGGNVGELDYGYVPIRHAQSKVLGNGSDAQRHAWAD 234
Query: 216 SMLDWLDLSRYKDIDGTPLSRSEIAS-FVGEVFAERVRSTSFKDPSIPSSEVGVKR---- 270
+++ LD S+Y D G PL+ +E+ VGE R+ + ++ + GV
Sbjct: 235 AVMPLLDRSQYLDDAGNPLNDAELRKVLVGEDREAWERANAAARGNVAPRKQGVWDTIAY 294
Query: 271 ---------------------EFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLS 309
RV HF+D+ AHM Y FG + +N ++ + ++
Sbjct: 295 GGVNKIVPGETSGGAARANAGSAHRVLHFRDADAHMQYNRQFGEGSLLNALV-DHVGGMA 353
Query: 310 KDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWE- 368
K+I + GPN +K + T +D LE ++ W
Sbjct: 354 KNIALVERYGPNPTRNMKTQMQLTAVHDGT------------EMRTLEGGMTSVGAYWNY 401
Query: 369 VMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFI-SRQMLSRVGIDKEA-- 425
V T N A M LR+ A L + AL + G + ++V K
Sbjct: 402 VTGATNTPVNPALARKMETLRTTVSAVKLQGTILAALGDVGTMFVTAGYNKVPFFKTLGT 461
Query: 426 IQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLD 485
R+ K+ LS GL AE + + A L + K+ G
Sbjct: 462 AARLMAPGSKDFRSWLSSQGLIAESLEHGLNRWGTDNLATTWARNLSAATMKFGGVTGWT 521
Query: 486 KKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMS 545
++ + + + T L R + L D+ ++ +A
Sbjct: 522 DALRTAFQSHMMRGLAGIGRT--DWNSLTEWDRRALTR----AGLTADDWAIVNKATPGK 575
Query: 546 SPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADL 605
D TP + + + AD+
Sbjct: 576 YGDAEY--LTPDALYA-----------------------------------TGEARAADV 598
Query: 606 ERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMF 665
K + +++++ + D + + + GT GE + F
Sbjct: 599 VPKLLGMIREEGEFAVLN------------------PDLRTKVIASATPGTVTGELKKSF 640
Query: 666 QQFTTTPTGMFLNILDL----SNSAKMPKGASMALNHVWIQYSA---TMALAGIGVASIK 718
QF + P M S + AL + +A + L G K
Sbjct: 641 MQFKSFPMAMISRHWGRIGDMRRSGDFRVDGAPALANPMAYAAALVVSTTLIGAISTQAK 700
Query: 719 ALLRGEDPSLP--------EVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLL--GPV 768
LL G+DP G D L D ++ G GP+
Sbjct: 701 NLLAGKDPEPMFDDVKHAGGFWTRAFSVGGGAGFAGDMLVAAFQSADYGSLLGSAIGGPL 760
Query: 769 PSMV----TNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILE 824
S + ++S+ + A + + + K + P +N+W+ K ++ LI + + E
Sbjct: 761 LSTLFQPLRAVSSNVQDAAQGKDTHIGADLLKIAQSNTPLVNLWFWKTVWNRLIWDNLAE 820
Query: 825 ELNPGYLDRQQSKKK-KKGIELFQNMDEGLPHRLP 858
L+PG R ++ + + + F + G P R P
Sbjct: 821 NLSPGVTQRNMNRSRTQYHNDYFWSPGTGSPQRSP 855
>gi|221201510|ref|ZP_03574549.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221207934|ref|ZP_03580940.1| hypothetical protein BURMUCGD2_2469 [Burkholderia multivorans CGD2]
gi|221172119|gb|EEE04560.1| hypothetical protein BURMUCGD2_2469 [Burkholderia multivorans CGD2]
gi|221178778|gb|EEE11186.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 869
Score = 450 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 171/940 (18%), Positives = 309/940 (32%), Gaps = 162/940 (17%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M +C+ + AAGR+L++ E+ +E+ + + L +S+A+R A
Sbjct: 1 MHQKCVNAVEAAAGRKLTQAEIDGIENRVRAGMRAKARQDPLAWSAMSQADRVAAGAEWA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDL---DRVQAGVYGKSQALFNK-----LFFKAG 106
+ E +D K+ Q+ + DR+Q +Y + K +
Sbjct: 61 RQQLVHEA------ELDRMRKQLQIAKQIETTDRIQEALYADPENAHRKRARETIVKHDI 114
Query: 107 SAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLD---KQFGLDVFDEM-KGKK--TQ 160
L IK+ + E + G L D D+ E+ +G T
Sbjct: 115 EQTYVLAGAIKSDYMRQTMGAIEAMKAGQNFLARAFDVDNPAMERDIIREVYRGADGSTG 174
Query: 161 NEQASRLVKQYFETQRELHSQAHEAGL-----DYKFFENRIPQPMSVDKLRATKKDDFVR 215
NE A +Q +T + + + AG DY + R Q + + +
Sbjct: 175 NEVAKAAAEQISKTTAAMRERFNRAGGNVGELDYGYVPIRHSQSKVLGNGSDAARHAWAD 234
Query: 216 SMLDWLDLSRYKDIDGTPLSRSEIASFV-GEVFAERVRSTSFKDPSIPSSEVGVKR---- 270
+++ LD S+Y D G PL+ ++ + GE R+ + +I + GV
Sbjct: 235 AVMPLLDRSQYLDDAGNPLNDVDLRKMLVGEDREPWERANAAARGNIAPRKQGVWDTIAY 294
Query: 271 ---------------------EFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLS 309
RV HF+D+ AH+ Y +G + +N ++ + ++
Sbjct: 295 GGINKIVPGETTGSAARANAGSAHRVLHFRDADAHIQYNRQYGEGSLLNALI-DHVGGMA 353
Query: 310 KDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWE- 368
K+I + GPN +K + T +D LE ++ W
Sbjct: 354 KNIALVERYGPNPTRNMKTQMQLTAVHDGT------------EMRTLEGGMTSVGAYWNY 401
Query: 369 VMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFI-SRQMLSRVGIDKEA-- 425
V T N A M LR+ A L + AL + G + ++V K
Sbjct: 402 VTGATNTPVNPALARKMETLRTTVSAVKLQGTILAALGDVGTMFVTAGYNKVPFFKTLGT 461
Query: 426 IQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLD 485
R+ E LS GL AE + + A L + K+ G
Sbjct: 462 AARLMAPGSSEFRSWLSAQGLIAESLEHGLNRWGTDNLATTWARNLSAATMKFGGVTGWT 521
Query: 486 KKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMS 545
++ + + + T L R + + D+ V+ +A
Sbjct: 522 DALRTAFQSHMMRGLAGIGRT--DWNSLTEWDRRALTR----AGITADDWAVVNKATP-G 574
Query: 546 SPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADL 605
DG Y TP + DA + AD+
Sbjct: 575 RYDGAEY-LTPDALYATGDA-----------------------------------RAADV 598
Query: 606 ERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMF 665
K + +++++ + D + + + GT GE + F
Sbjct: 599 VPKLLGMIREEGEFAVLN------------------PDLRTKVIASATPGTVTGELKKSF 640
Query: 666 QQFTTTPTGMFLNILDLSNSAK---------MPKGASMALNHVWIQYSA---TMALAGIG 713
QF + P M + + P+ + L + +A + L G
Sbjct: 641 MQFKSFPMAMISRHWGRIGNMRRSGDYLVEGAPRAFGIPLANPMAYAAALVVSTTLIGAI 700
Query: 714 VASIKALLRGEDPSL--------PEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGG-- 763
K LL G+DP G D L D ++ G
Sbjct: 701 STQAKNLLAGKDPEPMFDDVKHAGGFWTRAFSVGGGAGFAGDMLVAAFESADYGSLLGSA 760
Query: 764 LLGPVPSMV----TNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLIL 819
+ GP+ S + ++S+ + A + + + K + P +N+W+ K ++ LI
Sbjct: 761 VGGPLLSTLFQPLRAISSNVQDAAQGKDTHVGADLLKIAQSNTPLVNLWFWKTVWNRLIW 820
Query: 820 NQILEELNPGYLDRQQSKKK-KKGIELFQNMDEGLPHRLP 858
+ + E L+PG R ++ + + E F + G P R P
Sbjct: 821 DNLAENLSPGVTQRNMNRSRTQYHNEYFWSPGTGAPQRAP 860
>gi|317120709|gb|ADV02531.1| hypothetical protein SC2_gp030 [Liberibacter phage SC2]
gi|317120770|gb|ADV02591.1| hypothetical protein SC2_gp030 [Candidatus Liberibacter asiaticus]
Length = 809
Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 188/877 (21%), Positives = 346/877 (39%), Gaps = 103/877 (11%)
Query: 1 MKPECIQVLNKAAGR-ELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQ 59
MK ECI + AAG +LS ++ +E I ++ + +G+ +A A L ++ +
Sbjct: 1 MKEECINAVRVAAGELKLSDVDIEHIEHHI---RIAWEQEGVKQAG---FADLPLDQQIK 54
Query: 60 KELIRSVNDAIDEA--YKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIK 117
+ ++ + ++ YK ++L S + L ++L A S +EM IK
Sbjct: 55 RVSKKAKSSFFSDSDRYKPYELLSTFKG-----ENQVTELGHRLAHHATSGG-SIEMSIK 108
Query: 118 AAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRE 177
+KV +F +Y G+K GF D ++ ++G K N +A +L + ET
Sbjct: 109 GLRSKVFDRFKDYHTYGTKAFGFKNDVNAHTELLRALRGDKGVNPEALKLASIFHETMDF 168
Query: 178 LHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRS 237
L +A G+ + +N PQPM K+ KD+FV L LD + Y+ +
Sbjct: 169 LVKEAKAVGIKFNPRDNYTPQPMDFRKISLVTKDEFVDRTLPRLDWAEYQKRG--LDNEG 226
Query: 238 EIASFVGEVFAE-------RVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEH 290
+ FV +V+ +V ++ KD S +G + R H+ Q ++ M+
Sbjct: 227 SLRQFVEDVYETLASEGRNKVIASGGKDHSGI--SLGGRLRQVRQLHYT-PQGLVEAMKE 283
Query: 291 FGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGN-KVLKD 349
FG V +++ +L +DI IARE G NA+ ++ D+E + K
Sbjct: 284 FGSDLTVEGMMSRSFDNLIRDIAIAREFGANANENFNFVLASMFERDREDINSRLEGDKK 343
Query: 350 WLGRNKLEVRQEAMLQM-WEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIG---AL 405
NKL+ ++E +QM W+ + G +T + + + LG + +
Sbjct: 344 TKALNKLK-KEEMQVQMDWDGLTMGRKQPST-MDKIVDSATAWTVITKLGSQSLYIPKEI 401
Query: 406 LEDGFISRQMLSRVGIDK-EAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDA 464
+E F+ Q + I + + KER E + + + E + +E +
Sbjct: 402 IESAFMGSQRMGYTWKTNIANIWNASPVAGKERKEFIKSITVGLEHMATGFTRDLETNSQ 461
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIK 524
+G + K W G LD + + + + +G T + + LK
Sbjct: 462 SVLG-VMAKKTMDWQGLTTLDNMMVRGLSATLQDYVGGFTRNFKDMDSLK---------- 510
Query: 525 AFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKL 584
K++ + F I + D +K L AD +
Sbjct: 511 ---KKIGEQSFKSIIDEHRFNERD----------LKLLSLADTESFKGKGTYLTDKNIYR 557
Query: 585 KNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDR 644
+ L+P ++ D+ R LK ++NK + VQ RG++ +++ D+
Sbjct: 558 IDDTKLTP-----FLKKGEDIYR-----LKSDLANKYRTFIWSTVQEHARGSVGSTIQDK 607
Query: 645 QRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYS 704
+ +T K G+ R+ QF P + ++P + V+ +
Sbjct: 608 R---WITGKDGSV-NNLARLMGQFLVMPIS-----WSRMHLIEIPSSLVGVSSQVYRAKA 658
Query: 705 ATMALAG--IGVASIKALLRGEDPSL---PEVIYDGTLANGALLPYMDRLTKLVSKGDRA 759
+ + G + ++ L+ G++P L Y L NG + + +R + S G
Sbjct: 659 LVIGILGEELIRKTLVPLISGKEPQLDFSDPTEYIKALING--ITHYERFSPFNSSG--- 713
Query: 760 AIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKA------IRKTLPFMNMWYLKNS 813
+LGP S L + E + + +A + +PF N+WY + +
Sbjct: 714 --WDVLGPWSSQAGKLAIAGKEAVWDEGTRKQRGKAQAQFGKELVNTFVPFQNLWYARGA 771
Query: 814 FDHLILNQILEELNPG-------YLDRQQSKKKKKGI 843
F+H + N I + LNPG Y RQ+ KK++K
Sbjct: 772 FNHFVRNSIDDVLNPGGRARAEVYRQRQKYKKQRKRN 808
>gi|293609607|ref|ZP_06691909.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828059|gb|EFF86422.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 1175
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 134/650 (20%), Positives = 257/650 (39%), Gaps = 47/650 (7%)
Query: 1 MKPECIQVLNKAAGRE-LSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLK 53
MK +C Q + KA G++ L+ +E +E I +L + + LS AE+ A +
Sbjct: 1 MKEQCKQAVAKALGKQSLTAQEATDIEARINETMRNLARKDINNWRNLSDAEKLTEAAKQ 60
Query: 54 AEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG-SAEVPL 112
D Q++L R A + K+ Q + LD G + + + S +
Sbjct: 61 VAIDIQEQLKRKHKIAAQDILKQSQNIAALD---HGKLSSMEVIDRMVAAHGDMSGIQSI 117
Query: 113 EMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYF 172
+ K + + ++ LG D++ + E G+ T + A ++ +
Sbjct: 118 DSKARGIAAIYRGELVDFYTNIKGGLGIFTDQELVQKIVRERFGESTGDALAKKISDKMG 177
Query: 173 ETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDG 231
+ + + + G D +N +PQ +++K+ K +V +D +Y +G
Sbjct: 178 DVFETMRDRFNRNGGDIGKLDNWGLPQTHNLEKIAQAGKQAWVSKAESLIDTRQYVHENG 237
Query: 232 TPLSRSEIASFVGEVFAERVRSTSFK------DPSIPSSEVGVKREFERVFHFKDSQAHM 285
S+ EI S + + + K +S+V + RV HFKD+++ +
Sbjct: 238 DYYSQQEIRSLLEYTYDTLSSDGANKIEVGRQATGGGTSKVTNRHGESRVLHFKDAESWL 297
Query: 286 DYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNK 345
+Y FG V ++ + + LSKDI + LG N + +K ++ D E
Sbjct: 298 EYQSDFGGMQFV-DLVEAHINGLSKDIAMVENLGSNPKTALKILMDAAAKKDWEK----- 351
Query: 346 VLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGAL 405
+ N+ + ++ M++ + G T ++ AN RS ASMLG I +L
Sbjct: 352 ----GIEENQTKSSRKRAQVMFDELSGGNTPQSQVLANLGIAYRSMNVASMLGGTTIASL 407
Query: 406 LEDGFISRQM----LSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEG 461
+ I++ +S I+++N +R E +GL E ++ G
Sbjct: 408 ADQATIAKNASVHNVSYRKAFGGLIEQLNPANKADR-EQAHSLGLATEEML--GSIARWS 464
Query: 462 SDAFQIGHKLHSKMHKWSGAEYLDKKRIS-SHALIVYNQIG---RMTDTYASLKDLKADP 517
D + K+ + S R+S +AL +++G + + Y L KA
Sbjct: 465 DDGLTSTYGKSEKLARISSGVATQVMRVSFLNALTSASKVGFTKLLMEKYGRLSRSKAWN 524
Query: 518 RLDPSIKAFFK--QLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADL-----RDL 570
LD + LD+ + V + A+ + G + +I + D L +D+
Sbjct: 525 DLDVQDRELLSNTGLDERAWQVFQLAEPVVDRKGNQLM-SARSIYEIPDDKLLAAMDKDV 583
Query: 571 ARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNK 620
++ I K+L + L ++ +Q+L D++R L D + K
Sbjct: 584 NQLVSGINDQIKELNDRNALDDQRILNREQKLDDVKRSLSQRLLDYANRK 633
Score = 200 bits (508), Expect = 8e-49, Method: Composition-based stats.
Identities = 72/361 (19%), Positives = 139/361 (38%), Gaps = 29/361 (8%)
Query: 506 TYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDA 565
D K D + + + +K +D + A+ + S+ +
Sbjct: 808 RIKGKTDKKIDSSVARNTRRNYKSGEDLG-RRLGNAERRMTEMRAKMRAADSSANKSINQ 866
Query: 566 DLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINIL----KDKVSNKM 621
+DL + + + + + +RQ + +LA+ E +L +D+V++++
Sbjct: 867 KFKDLDKRVNALDDEFVEYQAKVAERQAKRQYVMDKLANSIDGEKKLLAQKIRDEVASQL 926
Query: 622 HALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILD 681
A +LD +V A R+R + +GT GE + QF + +
Sbjct: 927 QAHLLDEQGMAVIEA-----GLRERTWMTVGAKGTITGEVFKGLMQFKSFSASFLMRQGS 981
Query: 682 LSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPS------LPE----V 731
+ + + KG + I +M L G V ++ +L G DP P+
Sbjct: 982 RAMAQEGLKGKA----AYAIPLMVSMTLLGGLVVQLREILNGNDPQTIYDSNDPKKATSF 1037
Query: 732 IYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSK 791
+A G L D L R A + GP+ S T+L V T+ NE
Sbjct: 1038 FMRSLVAGGGLPVLGDILVAGTDTSGRDANSFVSGPLGSDFTSLLGLTVGNLTQYNEGKD 1097
Query: 792 VN----ATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK-KGIELF 846
N A K ++ +P N+WY K + + ++ +++ + + PGY ++ K ++ + E F
Sbjct: 1098 TNFGNEAFKFVKGKIPAQNLWYTKAAINRMVFDEMQDTIAPGYREKALRKAERQQDRERF 1157
Query: 847 Q 847
Sbjct: 1158 W 1158
>gi|167032768|ref|YP_001667999.1| hypothetical protein PputGB1_1760 [Pseudomonas putida GB-1]
gi|166859256|gb|ABY97663.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 855
Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 145/882 (16%), Positives = 306/882 (34%), Gaps = 92/882 (10%)
Query: 5 CIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGK--GLSKAERYRLAGLKAEEDFQKEL 62
C + AAG ++ E++ + + + + L + A + +
Sbjct: 10 CADAVRAAAG-DMESNEIQEIFQLLRGRTQEILAREGALGSEQAALRAADELARQAEHAA 68
Query: 63 IRSVNDAIDEAYKRHQLRSDL-DRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAET 121
I +A+ R +L + + D+ ++ + + + + KA
Sbjct: 69 IIERRNALINVRARARLVAFVRDQFADRPDLGIESFLVGTNLARQGSRLSVAAEQKALGD 128
Query: 122 KVLSKFN---EYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQ--NEQASRLVKQYFETQR 176
+ + A++ + D+ ++ K + T+ N Q + K + Q
Sbjct: 129 AYIGGMLADLDRADLTAVLARGDSDQDIADALWRIGKDQDTKDLNPQVVEIAKIIQKYQE 188
Query: 177 ELHSQAHEAGLDYKFFENRIP-QPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLS 235
A+ AG I Q +K+ A + + +L LD + ++ G P+
Sbjct: 189 GARIDANRAGASIGKLPGYIARQSHDSEKMGAAGFERWAEEILPRLDTATFR-EGGDPMV 247
Query: 236 RSEIASFVGEVFAERVRSTSFKDPSIPSSEV--GVKREFERVFHFKDSQAHMDYMEHFGV 293
+ + G V + ++S + + P+ K ERV HFKD A +Y + FG
Sbjct: 248 FLK-GVYDGLVSGDHLKSPAGQQPNGFRGPANLAKKLSQERVLHFKDGVAWHEYNQLFGT 306
Query: 294 STNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGR 353
N+ + L ++ + R LG N ++ + M + I D A L ++
Sbjct: 307 G-NLREAVLRGLDLSGQNTALMRRLGTNPEANLN-MAMDVIKEDVRAGGDPAALANFNTA 364
Query: 354 NKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISR 413
+ + ++ EV N A A +R+ S LG + + + +
Sbjct: 365 RRGVIG----NRLKEVSGQTRIPGNATQARVAANVRAWQSLSKLGGALLSSFTDLPVAAS 420
Query: 414 QMLSRVGID-----KEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIG 468
+M + + + E+ ++LS G+YA+ + D+ +G
Sbjct: 421 EMRYQGQSFLGSLAEMGAGLMKGRGSAEQRQILSAYGVYADSMRGEIMRRFSADDS--VG 478
Query: 469 HKLHSKMHKW---SGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKA 525
K+ M ++ +G + +S L++ + + + + + L D +
Sbjct: 479 GKMSRGMSQFFRLNGLSWWTDANKASAGLMMAHNLAQ--NKGKAWGSLNGDFKRALG--- 533
Query: 526 FFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLK 585
LD + +++ + DG Y TP I + D + ++
Sbjct: 534 -LYDLDAGKWELLREMDTRMA-DGRDYM-TPDGIAGISDERIGQYLAERNR--------- 581
Query: 586 NSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQ 645
PE +++ DLER + D+V+ + R M+
Sbjct: 582 ------PESAGAIRETRQDLERSLRAYVNDRVTYAVL-----EPDARTRSIMNQGT---- 626
Query: 646 RLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNH------- 698
+ GT G+ LR QF + P L + ++ +
Sbjct: 627 -------QPGTVPGDLLRFVTQFKSFPAAYMQKTLGRELYGRGYTPTALGNSFRGGRDLV 679
Query: 699 -----------VWIQYSATMALAGIGVASIKALLRGEDPS---LPEVIYDGTLANGALLP 744
Q G + K + +G +P P+ + G L
Sbjct: 680 QALRNGNGERLALAQLMLWTTAFGYLSMASKDVTKGREPRPADDPKTWLAAMVQGGGLGI 739
Query: 745 YMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPF 804
+ D L ++ +A+ GP ++ + + K+ +++ +A + + PF
Sbjct: 740 FGDYLFGEANRFGNSALESAAGPTIGTAADVIN--LWARAKEGDDTASSALRLAQNNTPF 797
Query: 805 MNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELF 846
MN++Y + + DHL L + E +NPG L R + + +++ + F
Sbjct: 798 MNLFYTRIALDHLFLYSVQEAMNPGSLRRTEERIRQQNGQEF 839
>gi|85059662|ref|YP_455364.1| hypothetical protein SG1684 [Sodalis glossinidius str. 'morsitans']
gi|84780182|dbj|BAE74959.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 507
Score = 435 bits (1119), Expect = e-119, Method: Composition-based stats.
Identities = 113/506 (22%), Positives = 214/506 (42%), Gaps = 25/506 (4%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSL------DGKGLSKAERYRLAGLKA 54
M+ ECIQ + A+ R L+ E++ +ED IV+ L + LS++ER + AG A
Sbjct: 6 MRQECIQAITAASKRTLTSAEIQGIEDRIVKNMRHLARNDPTSWRSLSESERMQRAGHMA 65
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E ++E R +L + + + G GK +AL K+ F A + + +
Sbjct: 66 AEALEREATLKKRRVALTIAARQRLDNFIAGYK-GKGGKLEALNRKIAFHADGKAPFLSV 124
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ +E ++ + + DKQ+ D+ EM+G+ T N +A + + +
Sbjct: 125 ESRTKATRDYALSQLDELFSAIDPRFFQLFEDKQWIRDLVYEMRGQDTGNVRAKKGAEAW 184
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID 230
L + ++AG D E+ +PQ S++K+ + D+V ++ LD ++Y +
Sbjct: 185 KNVSELLRRRFNDAGGDIGHLEDWGMPQYHSMEKVGKATQSDWVGFVIGKLDRNKYVKEN 244
Query: 231 GTPLSRSEIASFVGEVFAERVRSTSFK--DPSIPSSEVGVKR-EFERVFHFKDSQAHMDY 287
G +S ++A F+G + K D S R ER HFKD++ ++ Y
Sbjct: 245 GELMSDKDVADFLGHAYKTIATGGMNKLGDSGRRLSGARANRGNAERQIHFKDAEGYIAY 304
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
+ FG ++ IL + L +SKDI + GPN D + ++ + A + +
Sbjct: 305 QQRFG-EKSMWDILVNHLDGISKDIALVETYGPNPDHVFRSLLDELAAKTADETPSRTGK 363
Query: 348 KDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE 407
KL+ + E + + + V N A W +R+ AS LG I +L +
Sbjct: 364 -----IKKLKNKTEDLYNF--IAGKTQPVANPHIARWADHVRNWLVASRLGSALISSLSD 416
Query: 408 DGFISRQM-LSRVGIDKEAIQRINKMPLK--ERMELLSDVGLYAEGVVAHGRNMMEGSDA 464
+G + ++ + + + ++ M + + L E ++ +
Sbjct: 417 NGTMYLTAKVNNLPMAQLLRNQLAAMNPANKDEIRFARGASLAMETLLGSVNRWATDNMG 476
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRIS 490
+ + + + SG
Sbjct: 477 PSPSRWVANAVMRASGLSAWSDAHKR 502
>gi|315121926|ref|YP_004062415.1| hypothetical protein CKC_00880 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122888|ref|YP_004063377.1| hypothetical protein CKC_05720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495328|gb|ADR51927.1| hypothetical protein CKC_00880 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496290|gb|ADR52889.1| hypothetical protein CKC_05720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 810
Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 188/882 (21%), Positives = 335/882 (37%), Gaps = 136/882 (15%)
Query: 1 MKPECIQVLNKAAGR-ELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQ 59
M PECI+ + K AG +L ++L ++E + + L+GL+ E F+
Sbjct: 1 MHPECIERVKKLAGEWKLEPEDLDQIE----------------RVSKQALSGLELNESFK 44
Query: 60 KELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQAL-----------FNKL-FFKAGS 107
+++ + + K H L ++ G + S+ L N L F
Sbjct: 45 N--LKTADKVKALSEKAHLLL-----LENGAFAMSETLGGVGRAKHGEQLNTLKNFLRYE 97
Query: 108 AEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRL 167
+E +IK + F+++ ++GSKNLGF+ D + ++G +T + Q ++
Sbjct: 98 TTASIESRIKGEQANARKAFHDFEDLGSKNLGFSADPITNEKITKALRGVETDDPQVNKF 157
Query: 168 VKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYK 227
+ Y + + + +QA + GL + PQP K+RA K ++ +++ W+D+ Y
Sbjct: 158 GRAYRKIRDRVTAQAEDMGLLHPLDNWGSPQPDDALKIRAKGKKAWIETIMPWVDVEAY- 216
Query: 228 DIDGTPLSRSEIASFVGEVFAERVRSTSFK------DPSIPSSEVGVKREFERVFHFKDS 281
D L + F+G V+ + K + VG R+ R D
Sbjct: 217 --DKKGLYGKGLTEFLGHVWDTKSSEGRNKILASGGAEQAGKASVGGSRKQPRHLFLLD- 273
Query: 282 QAHMDYMEHFG-VSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEA 340
+ + DY FG N ++ + L +DI IAR G NAD+ + +I Q ND ++
Sbjct: 274 EHYSDYNAAFGKTGLNAEDLVRMTIDPLIRDIEIARTFGSNADNNFRWVITQAYENDLKS 333
Query: 341 SAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSA-------AG 393
+ + G +EA + +W+ + + + +N LR
Sbjct: 334 AKTASDVTKMGGL-----YKEANI-LWDRLTISSEMLDHELSNAQINLRELKSGFSTFQV 387
Query: 394 ASMLGQHPIGALLE------DGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLY 447
G AL E G + M E + + K + + G
Sbjct: 388 VKSFGMQIFSALPETINCVVMGSHRQGMPFWSRALPEFKRHLTNANYKASIRAFAPAG-- 445
Query: 448 AEGVVAHGRNMMEGSDAFQIGHK-LHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDT 506
E + N F G K L K KW G + LD+ + + +G +T
Sbjct: 446 -EMAITGMMNEFHNQSKFVSGMKVLAEKTVKWQGLKALDRFQRDLSFGFTSSWMGEVTRG 504
Query: 507 YASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDAD 566
+ L+D K+ + + T T+IK Y T S + L +
Sbjct: 505 FKGLEDFKS------------RYGEQTFKTLIKD-----------YGFTQSDMHALSKVE 541
Query: 567 LRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ----QLADLERKEINILKDKVSNKMH 622
L + L+P+ +E + LA E K I + +S+KM
Sbjct: 542 L-----------------DAGRLLTPDSIRECRHPDLVTLARSENKSIERMMGDLSSKMS 584
Query: 623 ALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDL 682
+ Q + RG++ +SL D + T RG G L + QF TTP M L
Sbjct: 585 GYIWSQTQDNARGSVGSSLRDTK----YTSSRGGIPG--LSLVTQFLTTPISMAEKHLWA 638
Query: 683 SNSAKMPKGASMALNHVWIQYSA-TMALAGIGVASIKALLRGE---DPSLPEVIYDGTLA 738
+ M+ ++ A + L GI + + L G+ D + P+V+ L
Sbjct: 639 VPKTLVGGANGMSAWSYRAKFLAFGIVLEGIVANTARKALTGQELDDFTDPKVL---ALM 695
Query: 739 NGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELAT---KDN----ENSK 791
L + DR + + + PV S V L + +E++ ++ +
Sbjct: 696 TARTLTHYDRFFNEYHHDFKDLLHSV--PVASTVIGLGDAGLEVSRNIFGEDEEKKAKAN 753
Query: 792 VNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDR 833
K + +P N++Y+K +F ++++ + E N GY DR
Sbjct: 754 AKLAKEVANNMPLKNLFYVKAAFQKMVVDNLCEYFNEGYKDR 795
>gi|303328566|ref|ZP_07359001.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861332|gb|EFL84271.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 855
Score = 422 bits (1084), Expect = e-115, Method: Composition-based stats.
Identities = 158/893 (17%), Positives = 303/893 (33%), Gaps = 101/893 (11%)
Query: 21 ELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLR 80
E + D ++ L G + A E ++ K +
Sbjct: 2 EALDIVDMLLEQKARLKASGDLTPQNLSRAWSATAEGLARQRAIQRRRTALGLVKFREAA 61
Query: 81 SDLDRVQA---GVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKN 137
+D +A QAL + + A + + S E
Sbjct: 62 GFVDSAKAQGVSAMEGIQALMVGVSRRFDGARRSVSALRQGIFKSWASPMLRELEAVDNG 121
Query: 138 LGFT---LDKQFGLDVFDEMKGKK-TQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFE 193
DK F VF EM+ T ++ A + + + + + AG D +
Sbjct: 122 AALRLMREDKAFHDSVFREMREPDSTGDKNARAIADIFSRYTEQSRVRLNAAGADIGKLD 181
Query: 194 NRIPQPMSVDKLRA---TKKDDFVRSMLDWLDLSRYKDIDGTPLSRS-EIASFVGEVFAE 249
PQ KL A + +V ML LDL R DG L + + V+
Sbjct: 182 GWTPQTHDPYKLMAGGEAGRAKWVDFMLPRLDLER--TFDGVGLVDANRARELLNGVYDT 239
Query: 250 RVRSTSFKDPSIPSSEVGVKREF------------ERVFHFKDSQAHMDYMEHFGVSTNV 297
T ++P +P G RV HFKD+Q ++Y + +G N+
Sbjct: 240 ---LTMGRNPHMPGDFTGGGASVPGPRNLASGMGKSRVLHFKDAQGALEYHDAYGRG-NI 295
Query: 298 NTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQE-----ASAGNKVLKDWLG 352
+ L ++ + + LGPN +++++ ++ + +++
Sbjct: 296 FDAMLRHLEQDARALALMERLGPNPQYTLERLLAHEKRALKDNAVLTPEEKARQMRELDN 355
Query: 353 RNKLEVRQEAMLQMW--EVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGF 410
+ ++ + W E+ + A A LR++ S LG + A+ +
Sbjct: 356 AFSGGIIRQGRVSAWLAELTGETSWAVHPTLARVGAVLRASQNLSKLGGASLSAIADVFT 415
Query: 411 ISRQMLSRV----GIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAH-GRNMMEGSDAF 465
+ M G +++ + + + ++ G + + V + S
Sbjct: 416 KAASMRVNGETWPGAIGKSLAQYIQGFSGKEKDVARQCGAFLDHVRGDIVARWDDASGMP 475
Query: 466 QIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKA 525
+ L K+ +WSG ++ ++ + + L + +G ++ KA +LD +A
Sbjct: 476 GVLADLQDKLFRWSGLNWITERGKAGYTLWLSEHLGEVSG--------KAFDQLDGPRRA 527
Query: 526 FFKQLDDTDFTVIKRAKAMS--SPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKK 583
Q D + + MS + DG Y TP L DADL L
Sbjct: 528 ML-QYHGVDPERWEAMRKMSHQAEDGKAY-FTPEAAAYLTDADLAPLLP----------- 574
Query: 584 LKNSKTLSPE-QRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLF 642
+++K P+ Q +EL + L + +L D+ + + + R M
Sbjct: 575 -EHAKNAPPDVQARELARIRDSLRFDSMAMLADETA-----FAIIEPDDATRAIMRQGT- 627
Query: 643 DRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILD-------------LSNSAKMP 689
+ GT AGE R QF + P +L +P
Sbjct: 628 ----------RPGTGAGEVWRAIMQFKSFPIAYMQRVLGGRRWVRGDLQRGMRYGPRNLP 677
Query: 690 KGASMALNH---VWIQYSATMALAGIGVASIKALLRGEDPSLP---EVIYDGTLANGALL 743
AL + + + G ++K L +G +P E + +G
Sbjct: 678 GAVEDALTRDMGGLMGFVLSSVAFGYASMTLKDLAKGREPRSLAHRETWLAAAMQSGGAG 737
Query: 744 PYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLP 803
+ D L V++ + +GP+ ++ + + +L D ++ + + P
Sbjct: 738 IFGDILFGKVNRFGNSFAETAVGPLGGLIGDAATLGGQLVRGDMADAGEDTLRLAMGNAP 797
Query: 804 FMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHR 856
F+N+WY + + D ++L + E ++PG L R + K KK+ + F R
Sbjct: 798 FINLWYTRAALDWMLLYHVREMMSPGTLRRTERKMKKEFGQEFLFPPSQFIRR 850
>gi|254251753|ref|ZP_04945071.1| hypothetical protein BDAG_00950 [Burkholderia dolosa AUO158]
gi|124894362|gb|EAY68242.1| hypothetical protein BDAG_00950 [Burkholderia dolosa AUO158]
Length = 865
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 171/937 (18%), Positives = 308/937 (32%), Gaps = 160/937 (17%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGI---VRAYVSLD---GKGLSKAERYRLAGLKA 54
M +C + +AAGR+L K EL +E+ + +RA D + +++AER + A
Sbjct: 1 MHAKCAAAVAQAAGRDLKKAELDGIENRVRAGMRAVARQDPAAWRSMTEAERVQAGAEWA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDL---DRVQAGVYGKSQALFNKLFFKAGSAEVP 111
+ + E +D+A K+ Q+ + DR+Q ++ + + K + + +
Sbjct: 61 RQQLEAEAN------LDKARKQLQIAKQIETTDRIQEALFADPERAYAKRA-REKAVKAD 113
Query: 112 LE------MKIKAAETKVLSKFNEYAEVGSKNLGFTLD---KQFGLDVFDEM-KGKK--T 159
+E IKA + E + G L D D+ E+ +G T
Sbjct: 114 IERTYELAGGIKADYMRQTMDAIEAMKHGQNFLARAFDIDNPAMERDIIREIYRGADGST 173
Query: 160 QNEQASRLVKQYFETQRELHSQAHEAGLDYKFFEN-RIPQPMSVDKL----RATKKDDFV 214
NE A +Q T + + + AG + + +P S K+ + +
Sbjct: 174 GNEVAKAAAQQIGATSNAMRERFNRAGGNVGQLDYGYVPIRHSQAKILGNGSDAARHAWA 233
Query: 215 RSMLDWLDLSRYKDIDGTPLSRSEIASFV-GEVFAERVRST------------------- 254
+L LD S+Y D G PL + + + GE
Sbjct: 234 DFVLPRLDRSQYLDDAGNPLDDAALRRVLTGEDRESWEARNIAARGMGVEPRQQGVWDTI 293
Query: 255 --SFKDPSIPSSEVGVKRE-----FERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELAS 307
+ +P G RV HFKD+ AH++Y +G + +N ++ +
Sbjct: 294 AYGGVNKIVPGETTGAAARANAGSQHRVLHFKDADAHIEYNRAYGEGSLLNALI-DHVGG 352
Query: 308 LSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMW 367
++K+I + GPN ++ + T +D LE ++ W
Sbjct: 353 MAKNIALVERYGPNPTRNMRTQMQLTALHDNT------------ELRTLEGGMTSVGAYW 400
Query: 368 E-VMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFI-SRQMLSRVGIDKEA 425
V T N AN M +R+ A L + AL + G + +RV K
Sbjct: 401 NYVTGATNTPVNPAVANKMETVRTTVSAIKLQLTILAALGDVGTMFVTAGYNRVPFFKTL 460
Query: 426 --IQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEY 483
R+ + L+ GL AE + A L ++ K+ G
Sbjct: 461 GTAARLMGPGSGDYRSWLTSQGLIAETLEHGLNRWGTDHLATSWAKWLSAQTMKFGGVTG 520
Query: 484 LDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKA 543
++ + + ++ T L R + + D+ ++ RA
Sbjct: 521 WTDAMRTAFQAQMMRGLAEISGT--EWSKLTEWDRRSLTR----SGITADDWALVNRATP 574
Query: 544 MSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLA 603
+G Y TP + DA D+
Sbjct: 575 -GEYNGSKY-LTPDALYGTGDARAADVVP------------------------------- 601
Query: 604 DLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALR 663
K+ ++ D + +V D + + GT GE +
Sbjct: 602 ----------------KLLGMIRDEGEFAVLNP------DLRTKVIAAATPGTLQGELQK 639
Query: 664 MFQQFTTTPTGMFLNILDL----SNSAKMPKGASMALNHVWI---QYSATMALAGIGVAS 716
F QF + P M S + L + L G
Sbjct: 640 TFLQFKSFPIAMISRHWGRIGEMRRSGDFRVEGAPTLASPMAYGAALVVSTTLLGALAVQ 699
Query: 717 IKALLRGEDPSLPE--------VIYDGTLANGALLPYMDRLTKLVS--KGDRAAIGGLLG 766
++ LL G+DP + G D L+ +++ A G
Sbjct: 700 LQNLLLGKDPEPMGDDVKHGGAFWFRAFTKGGGAGFAGDMLSAMLTGKNPAEAVGSVFGG 759
Query: 767 PVPSMVTN----LTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQI 822
P+ S +++A+ A + + + K + +P +N+WY K ++ LI + I
Sbjct: 760 PLVSTAIQAVTPFSNNAMAAAEGKDTHLSADLLKFAQSNMPIVNLWYWKTVWNRLIWDNI 819
Query: 823 LEELNPGYLDRQQSKKKKK-GIELFQNMDEGLPHRLP 858
E L+PG R +K +++ + F P R P
Sbjct: 820 AENLSPGVTSRNVAKSRQQYHNDYFWEPGTSAPQRAP 856
>gi|167041093|gb|ABZ05854.1| hypothetical protein ALOHA_HF400048F7ctg1g21 [uncultured marine
microorganism HF4000_48F7]
Length = 828
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 145/892 (16%), Positives = 296/892 (33%), Gaps = 132/892 (14%)
Query: 9 LNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSK-AERYRLAGLKAEEDFQKELIRSVN 67
+ + L E + L D + ++ ++R + +KEL
Sbjct: 11 VANSTKFGLKASEAKELVDVLRNEQRNVRATAKGDYTIQFRKTAEELTARQKKELAAKRL 70
Query: 68 DAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEV---PLEMKIKAAETKVL 124
+ +K L + +D K L + A + K A +
Sbjct: 71 QRKQQVFKNEALDAKMDAGN----NKEATLSRMMVGSAKRGFQALDSIASKQIAMGKLRV 126
Query: 125 SKFNEYAEVGSKNL-------------GFTLDKQFGLDVFDEMKGK--KTQNEQASRLVK 169
+ + L G D++F + E+ K+ N +A ++ +
Sbjct: 127 GRILSVFGKTNLQLSRPTVSGFYPFGKGLFDDEKFQTALIKELFDGLGKSGNAEARQMAE 186
Query: 170 QYFETQRELHSQAHEAGLDYKFFENRIP-QPMSVDKLRATKKDDFVRSMLDWLD-LSRYK 227
+ +RE+ + G+ + ++ + Q + +++ + L+ +
Sbjct: 187 AVLKEKREMINALQAEGVPIGWLDDHVTTQTHDSAAIGKAGFKTWLKDIKGLLNHERTFL 246
Query: 228 DIDGTPLSRSEIASFVGEVFAERVRSTSF-----KDPSIPSSEVGVKREFERVFHFKDSQ 282
D F+ +V+ +P + + K R HF+DS
Sbjct: 247 SSDPEKQDD-----FLEKVYNNIKSGKRNVVELVSEPGVGRKSLSTKISQSRQLHFRDSA 301
Query: 283 AHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASA 342
A ++Y + +G S V I+ + LS + + + G N D K+++ +
Sbjct: 302 AWIEYNKKYGHSNAVQAIVQG-VGHLSDSLELIKVFGANPDGTFKRLLERQ--------- 351
Query: 343 GNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPI 402
D+ + +R E +V V N W W G+++ S LG
Sbjct: 352 ------DFDPGQRTMLRSE----YNQVSGAAFEVANPAWHKWTQGIQAIQNLSKLGSAIF 401
Query: 403 GALLE-------DGFISRQMLSRV--GIDKEAIQRINKMPLKERMELL-SDVGLYAEGVV 452
+ + + + + S + R+ + + +E+ +GL +GV+
Sbjct: 402 SSTTDPIYVAFTQHYHGKNIFSAYYNAFLNIGVGRLLQRGKSKEIEMFARKLGLGFDGVI 461
Query: 453 AHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKD 512
S +WSGA+ + + + + L
Sbjct: 462 G-------------------SAASRWSGAKDTTEF------------MQGAVNNFFRLNG 490
Query: 513 LKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLAR 572
L A+ D D T + K Y R + D+D +D+A
Sbjct: 491 LSGWTNFYREGAAYLMASDMADATKLNWDKLAP-----NYRRLLER-YGITDSDWKDIAG 544
Query: 573 MSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTS 632
+ +K+ +SP R + +L ++ I ++ L+ +N
Sbjct: 545 LP------FEKINGLDVISP-TRVFDEIELGNITGDAIPRSRELAEKIQQVLITENEFAV 597
Query: 633 VR-GAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKG 691
++ GA + R G K GT A ++F QF + M + +P
Sbjct: 598 LQPGANERAFMGRFFTGEEGIKSGTPMAMANKLFWQFRSFGLTMLFRQWPRAYEMGLPS- 656
Query: 692 ASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLP-----EVIYDGTLANGALLPYM 746
+ M L G ++K +L+G + ++ L +G
Sbjct: 657 ---------FYHLVPMVLMGYVAMAMKDILKGRELKDVVEDPGKIAVASVLQSGFGGIAG 707
Query: 747 DRLTKLVSKGDRAAIGGLLGPVPSMVTNLT---SSAVELATKDNE-NSKVNATKAIRKTL 802
D L + + + L GP S + +L ++ ++AT + ++ +A++ +
Sbjct: 708 DFLFNDYRQYSTSYVDLLAGPSGSSLNDLAEFGATTFDVATGGDPVDAAAAGWRAVKGNI 767
Query: 803 PFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELF---QNMDE 851
P+ N W + FD+LI Q+ E LNPG L R + + K+K + + E
Sbjct: 768 PYANWWASRTLFDYLINYQVQEILNPGSLRRMERRFKQKNNQDYRAGWAPSE 819
>gi|157372110|ref|YP_001480099.1| hypothetical protein Spro_3875 [Serratia proteamaculans 568]
gi|157323874|gb|ABV42971.1| hypothetical protein Spro_3875 [Serratia proteamaculans 568]
Length = 850
Score = 400 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 153/895 (17%), Positives = 314/895 (35%), Gaps = 107/895 (11%)
Query: 3 PECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLS---KAERYRLAGLKAEEDFQ 59
+C +++ KAAGR+LS EL+ + + R + S + + A D
Sbjct: 7 ADCEKIVIKAAGRDLSDDELQDVFGQLRRNIDRYQAENASMTLEEAALKAADEMVRGDKL 66
Query: 60 KELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGK-SQALFNKLFFKAGSAEVPLEMKIKA 118
+I + N AI+ R +L S L+ + + + L A
Sbjct: 67 ARVIEARNKAIN-LKIRTKLESFLNNSKESLGADRPDIALSALLVSRNEASEGFRASASR 125
Query: 119 AETKVLSKFNEYAEVGSKNLGFT-------LDKQFGLDVFDEMKGKKTQ--NEQASRLVK 169
+ ++ K+ E G + D++ ++ +G+ T ++++ +L +
Sbjct: 126 EQGQLEGKYIAGFEHDLNQSGLSKALSSGEYDQEIADALWKVGRGEPTAGLSKESIKLAE 185
Query: 170 QYFETQRELHSQAHEAGLDYKFFENRI-PQPMSVDKLRATKKDDFVRSMLDWLDLSRYKD 228
+ Q ++ AG I Q K+R +D+ ++L LD S +
Sbjct: 186 IINKWQEVARLDSNRAGSFIGKLAGYITRQSHDWAKIRGAGYEDWRDTILPRLDHSTFDG 245
Query: 229 IDGTPLSRSEIASFVGEVFAERVRSTSFKDPSI----PSSEVGVKREFERVFHFKDSQAH 284
+ +R E V A + + K + S + ERV HFKD A
Sbjct: 246 VA----NRDEFLQSVYNGLASGIHLSDQKSDWLSGFKGGSNQAKRASQERVLHFKDGVAW 301
Query: 285 MDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGN 344
+Y + +GV N+ + S L S ++ + R LG N ++ + A ++ +
Sbjct: 302 HEYNKAYGVG-NLRESVMSGLTSSARTTGVMRVLGTNPENMFGHLFETQQARLKKLN-NP 359
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGA 404
D+ GR R+ ++ E++ Y N+ A A +R+ G + LG I +
Sbjct: 360 AAEADFAGR-----RRALENELSEILGYNSIPANSAIARAGATIRAVEGMTKLGGAVISS 414
Query: 405 LLEDGFISRQMLSRV-----GIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMM 459
+ G + ++ + + K ++ ++ E+L +G++ + V
Sbjct: 415 FNDVGNAAMELRYQGMNLMDAMGKSIAGKLKGYSAADQKEILGYMGIFTDSVRDEMIAKF 474
Query: 460 EGSDA-FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPR 518
G + +L K + + + S L++ N + R + A
Sbjct: 475 SGDTSVPGRISRLQRTFFKLNLLNWWTENSRKSMGLVMSNWMARNSK--------SAWSS 526
Query: 519 LDPSIKAFF--KQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDK 576
++ ++ + + ++ + + + S TP+ +K + D +
Sbjct: 527 MNEDLRRVLNSSGITEREWNLYRGMEMDSVRGNQHM--TPNGVKYIPDERI--------- 575
Query: 577 IAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGA 636
+ + + + I ++ + K+ LD V ++
Sbjct: 576 ------------------AEYVAADGLQVNKASIAAARESLEGKLRGYYLDRVLIAMSEP 617
Query: 637 MHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDL-------------- 682
+ + + GT GEA+R QF + N +
Sbjct: 618 ----GARTRAMMKQGTQPGTPLGEAIRFGGQFKSFTGSFMQNTIGREIYGRGYTPAELGQ 673
Query: 683 ------SNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPS--LPEVIYD 734
+N+ + G M L ++I M G K LL+G+ P +
Sbjct: 674 SRFTSLANAMRNGNGEKMGLAQLFIW----MTALGYVSMQTKLLLKGQTPRPADAKTFLA 729
Query: 735 GTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNA 794
G L D L ++ L GP + + + + +D + +
Sbjct: 730 AAAQGGGLGIMGDFLFGEYNRFGGGLASSLAGPTVGDLDQIRNLFLRA--RDGDAKAADL 787
Query: 795 TKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNM 849
K PFMN+ ++ + ++LILN+ E L+PG L+R + + +K+ F
Sbjct: 788 LKFGIDHTPFMNLHVVRPAMNYLILNRAQEWLSPGSLERYRQRVEKEQGNTFIVP 842
>gi|262043648|ref|ZP_06016757.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038986|gb|EEW40148.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 974
Score = 365 bits (936), Expect = 2e-98, Method: Composition-based stats.
Identities = 142/887 (16%), Positives = 287/887 (32%), Gaps = 134/887 (15%)
Query: 23 RRLEDGIVRAYVSLDGKGLSKA--------ERYRLAGLKAEEDFQKELIRSVNDAIDEAY 74
+ + D + R +LD + + E+++ + + +++
Sbjct: 154 QNIADAMWRLGNNLDVGHIPEDAIKIARVLEKWQEKARIDANRAGASIGKLPGYIARQSH 213
Query: 75 KRHQLRSD-LDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEV 133
H++R+ + + + + + G V + E ++ + +
Sbjct: 214 DIHKIRTAGFEAWRDAILPELDPRTFEGLDVNGQNGVTVRKATVMTEDQIYGRARPAKPL 273
Query: 134 GSKNLGFTLDKQFGLDVFDEMKGKKT----QNEQASRLVKQYFETQRELHSQAHEAGLDY 189
+N+G + G + + N Q R + + Q + G
Sbjct: 274 KPENVGALAQRADGRFYIKGIVSENVDLMRGNGQVMRA--NFRNGDLLANGQDIDLGDIV 331
Query: 190 KFFENRIPQPMSVDKLRATKKDDFVRSM--LDWLDLSRYKDIDGTPLSRSEIASFVGEVF 247
F + ++V + D + G S++ I F+ V+
Sbjct: 332 GFRNDG---------------GEWVSVAGRIPRFDPAA---PGGLSPSQAVIDDFLHNVY 373
Query: 248 AERVRSTSFKDP--------SIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNT 299
+ S+ V + ERV HFKD + Y + FGV N+
Sbjct: 374 VGLSSGVHLRTDRPDWMTGFKGGSTNVARRASQERVLHFKDGLSWYRYNDKFGVG-NLRE 432
Query: 300 ILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVR 359
+ S L ++ + R +G N ++ ++ + + A KD NK +
Sbjct: 433 AVGSGLIHSAETTGLMRRMGTNPENMFNELADRIEQRYKAA-------KDDNALNKFRQK 485
Query: 360 QEAML--QMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLE-------DGF 410
+ L Q+ E+ N A A R+ LG I + + +
Sbjct: 486 RNTSLTSQLKEITGQTNIPGNAALARVAATTRAIETMMKLGGSMISSFNDIATQAMEMRY 545
Query: 411 ISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAH------GRNMMEGSDA 464
R ML V ++ + ER ++L +GL+A+ + N M G
Sbjct: 546 QGRNMLGSVWEATANKVQLTRWKNAERQQVLKSIGLHADAMKDELIYRFSADNSMPGRVN 605
Query: 465 FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIK 524
+ + + W S ++V +G T S D+ + R S+
Sbjct: 606 RAMRNYFRLNLQSW-----WTNSSRYSTGMMVSEWLG--THAGKSFGDVPEELRRVLSMH 658
Query: 525 AFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKL 584
+++ ++ + + K + DG Y TP + ++ D+ +
Sbjct: 659 ----GIEENEWAALSKMKL-HAADGNAYM-TPDGVADIPRTDIENY-------------- 698
Query: 585 KNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDR 644
L + + + + ++ +S+K+ +LD V ++ ++
Sbjct: 699 -------------LTNRGIKINDRSVEYARELLSDKVRGYILDRVGVALNEPDARTMSIM 745
Query: 645 QRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYS 704
++ +RGT GE LR QF + N + + S++ N+ + +
Sbjct: 746 KQ----GMQRGTAYGEMLRFAWQFKSFTASFMQNAIGRELYGRGYDFGSLSQNNTFRNNA 801
Query: 705 ATMAL-------------------AGIGVASIKALLRGEDPSLPE---VIYDGTLANGAL 742
A+ G K +LRG+ P + G L
Sbjct: 802 LIRAMRNGNGELMGIAQLFLWATAFGYLSMQTKLMLRGQTPRPADNVSTWTAAMAQGGGL 861
Query: 743 LPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTL 802
D L ++ L GP S L + + TK + +
Sbjct: 862 GILGDFLFGEYNRFGNTPATSLAGPFASDAAQLVN--LFGLTKQGDAKAADYFNFAINHT 919
Query: 803 PFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNM 849
P+MN+ ++ D LILNQ+ E ++PG L R Q + K++ F
Sbjct: 920 PYMNLHVVRPVMDFLILNQMREWMSPGSLQRYQQRVKEEQGNDFIIP 966
>gi|262043551|ref|ZP_06016664.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039085|gb|EEW40243.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 708
Score = 353 bits (904), Expect = 1e-94, Method: Composition-based stats.
Identities = 148/719 (20%), Positives = 268/719 (37%), Gaps = 84/719 (11%)
Query: 4 ECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAE--RYRLAGLKAEEDFQK- 60
+C +N AAGR+LS+ E+ L VR + L+ E A L+A ++
Sbjct: 8 QCEIAVNTAAGRKLSEDEMESL----VRDMNDTTNRILAGNEALTLEEAALRAAQELGNR 63
Query: 61 ----ELIRSVNDAIDEAYKRHQL----RSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPL 112
++I + N AI+ +L R+ DR G+ + S +
Sbjct: 64 DQLAKVIEARNKAINTRIAAQRLGELRRTWKDRPDIGLEAMLVGRNDARTGSRRSVSSEV 123
Query: 113 EMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQ-----NEQASRL 167
+ F++ V G + D++ ++ +G+KT + A+++
Sbjct: 124 AQLRGKYHAGINYDFDQAGLVKFIASG-SNDREIADAMWRIGRGQKTDGMTPQSVSAAKI 182
Query: 168 VKQYFETQRELHSQAHEAGLDYKFFENRI-PQPMSVDKLRATKKDDFVRSMLDWLDLSRY 226
+ ++ ET R + AG I Q + K+RA + + ++L LD + +
Sbjct: 183 IMKWQETARVDE---NRAGAWIGKMPGYIVRQSHDILKIRAAGYESWRNAILPRLDDATF 239
Query: 227 KDIDGTPLSRSEIASFVGEVFAERVRSTSFKDP---SIPSSEVGVKR-EFERVFHFKDSQ 282
I R V + A V TS K S VKR ERV HFKD
Sbjct: 240 DGIS----DREGFLRGVYDGLASGVHLTSEKPDWMNGFKGSANAVKRASQERVLHFKDGV 295
Query: 283 AHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASA 342
+Y E FG ++ + L S ++ I R LG N + K + TIA D +
Sbjct: 296 NWHEYNEQFGTG-SLREAVFGGLNSAARTTGIMRVLGTNPQNMFKYL-TDTIAKDVSKQS 353
Query: 343 GNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPI 402
L D++ +VR+ M +V + GWAN A +R S LG I
Sbjct: 354 NPAALADFM----TKVRRLNRTVMPQVDGSLNIPGSVGWANASANVRGWLRMSQLGGAVI 409
Query: 403 GALLEDGFISRQMLSRVGIDKEAI-----QRINKMPLKERMELLSDVGLYAEGVVAHGRN 457
+ + + +M + +A+ R ++ E+ E+LS +G+Y++ +
Sbjct: 410 SSFNDVPISATEMRYQGQNFMQALTGAMKGRFSRYTSDEQKEILSSIGVYSDTMTQEIIR 469
Query: 458 MMEGSDAF-QIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKAD 516
M G+D+ + K++ + + +S+A+++ N + + D L D
Sbjct: 470 RMSGNDSMSGKMGRAQQLFFKYNLMNFWTESGRNSNAMMITNWLAKNADQ--QFTALPED 527
Query: 517 PRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDK 576
R + D ++ + + M+ +G + T S I+ + D + D
Sbjct: 528 LRRVLD----LHGIGDAEWNIYRNMD-MADSEGRKFM-TTSGIRAVPDEVIGDYV----- 576
Query: 577 IAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGA 636
K LK ++ + R+ L+ QL +NI + ++ A +
Sbjct: 577 ---ASKGLKVTERSIADARETLESQLRGYILDRLNIAMSEPGDRTQAFM----------- 622
Query: 637 MHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMA 695
+ GT AGEA+R Q+ + N+L + A +
Sbjct: 623 ------------KMGTVPGTVAGEAVRFAGQYKSFTASFMQNVLGREVFGRGYTPAGLG 669
>gi|291336683|gb|ADD96225.1| hypothetical protein Rsph17025_0444 [uncultured organism
MedDCM-OCT-S08-C1350]
Length = 850
Score = 341 bits (873), Expect = 4e-91, Method: Composition-based stats.
Identities = 136/860 (15%), Positives = 291/860 (33%), Gaps = 95/860 (11%)
Query: 39 KGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQA--GVYGKSQA 96
KGL K+E +LA + + + E + + + K +++ + + G + A
Sbjct: 42 KGLGKSEAEKLAAKETLDQAKIEFAEKLRFTLLQKDKFNEITTLFATYRNKNGEIDIANA 101
Query: 97 LFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLG---FTLDKQFGLDVFDE 153
+ + +E + K + LG L K + E
Sbjct: 102 YRSMQAHDIVANTPNIERTVDIERGKAHQLMAGLLDKMKYKLGGRQSKLQKTNLKLMVKE 161
Query: 154 MKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDY-KFFENRIPQPMSVDKLRATKKDD 212
+ G+ T N A +L + ET L + ++ G + +PQ +R + K D
Sbjct: 162 LMGETTGNVNAKQLADAWRETAEHLRKRFNKFGGKVLSRKDWGLPQIHDSLLVRQSSKAD 221
Query: 213 FVRSMLDWLDLSRYKDI-DGTPLSRSEIASFVGEVFAERVRSTSFK---DPSIPSSEVGV 268
++ +L LDL + + G P + I + EV+ + +
Sbjct: 222 WIDYILPKLDLDKMVNERSGLPFNDKTIREALSEVYDNIATEGMATFKPGTAGYGRALHN 281
Query: 269 KREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQ 328
+R R FK++ M+Y FG T++ + ++++DI + + LGPN D+
Sbjct: 282 RRIDHRFLAFKNADDWMEYQTRFGSPDPFKTMME-HINAMARDISMLKILGPNPDATHTW 340
Query: 329 ---MIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVM--------RYGETVE 377
MI + + D A A K + + + ++ + E +
Sbjct: 341 ALGMIKKQMKIDAAAEAQGKFKRKKVSQKFSGNEEDRSNAIIENINNLYAYHKGTLHKPI 400
Query: 378 NTGWANWMAGLRSAAGASMLGQHPIGALLEDG----FISRQMLSRVGIDKEAIQRINKMP 433
+ A LR A+ LG + A+ + L ++EA++ + +
Sbjct: 401 DGFMGRTFAALRQILTAAQLGGASVMAITDFHWSRLTSKFNGLPAYKANQEALKLLGEGI 460
Query: 434 LKER--MELLSDVGLYAE---GVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKR 488
K++ +GL AE V + DA ++ + + SG ++ +
Sbjct: 461 KKDKAMARTAIRLGLIAEHWSTVAGVAARYLNEVDAPFWSKRISDVVLRGSGLSHITQSG 520
Query: 489 ISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPD 548
+ + + + + + K DP L ++ + ++ D+ +I+ K +
Sbjct: 521 RWAFGMSIMGTLAEESGKVFN----KLDPNLQKQLQKY--GIEADDWEIIRSTKLYDAGI 574
Query: 549 GYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERK 608
D ++
Sbjct: 575 DEPSMVGKGATFLRPDDIMKRA-------------------------------------D 597
Query: 609 EINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQF 668
++ ++ ++ V + +V TS + + + GT GE + +
Sbjct: 598 LDEATREFLTTRLLTYVTNETNFAVP----TSSAKGRITLSGSAQPGTVKGEIVNSMLMY 653
Query: 669 TTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSL 728
P + + L KG + L + A+ G IK + G+ P+
Sbjct: 654 KNFPITLGMTHLSRGFQQVGLKGKAKYL----VPMIVGGAVMGSIAYEIKQIAAGKTPTK 709
Query: 729 PE-----VIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELA 783
PE + + G L + D L ++ + L GPV S + + + A
Sbjct: 710 PEDMGVRYWLNAIIYGGGLGIFGDFLFSDQNRYGGSFSKTLAGPVASFIGDSINLTFGNA 769
Query: 784 ----TKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGY---LDRQQS 836
+ + N+ I++ P ++WY + + + ++ + I +NP + R +
Sbjct: 770 AQLISGEKTNAGKELAAFIQRYTPGSSLWYARVALERILFDSIERLINPDFDSDNRRNIN 829
Query: 837 KKK-KKGIELFQNMDEGLPH 855
K K + G + + + + P+
Sbjct: 830 KLKSRTGQDYWWSPGDIKPN 849
>gi|48696687|ref|YP_024981.1| hypothetical protein VP5_gp18 [Vibrio phage VP5]
gi|40806150|gb|AAR92068.1| hypothetical protein [Vibrio phage VP5]
Length = 782
Score = 332 bits (851), Expect = 1e-88, Method: Composition-based stats.
Identities = 144/848 (16%), Positives = 265/848 (31%), Gaps = 118/848 (13%)
Query: 48 RLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGS 107
L ED + + I YK+ + + V + AL L
Sbjct: 21 TDTDLITAEDIADAIKGKKQEKIA-VYKQAEAIKKGNEVLTQSKDPASALLGMLSRDPNE 79
Query: 108 --AEVPLEMKIKAAETKVLSKFNEYAE--------------VGSKNLGFTLDKQFGLDVF 151
+ + +I A +K +++ G + L ++ D
Sbjct: 80 EVKFLSADQRINAIRAVSKAKISDFMADLAPTTRQIFAGIATGERRL-TKSQQRLLDDFV 138
Query: 152 DEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKK 210
E+ G++T N A + K + + +L+++ +AG ++ +PQ + +
Sbjct: 139 HELYGRQTGNADALKAAKGWKKATEDLNARFGQAGGHMAELDDWRLPQKHNRMAISKAGA 198
Query: 211 DDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKR 270
D +V + D +D + + + V+ V ++ S +
Sbjct: 199 DVWVEKVWDLIDRDKMVKKLRKGKDEDNLREALYSVYNNIVTDGMSSSKTL-SKKFTDMM 257
Query: 271 EFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMI 330
ER FKDS + + Y FG TNV + + ++S+ I + GP+ D +
Sbjct: 258 RSERFITFKDSDSWLKYQREFG-DTNVYASMLGHIDNMSRAIGMMETFGPDPDIGFNTL- 315
Query: 331 VQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRS 390
+ G + R ++ +M Y E T W N +AGLR+
Sbjct: 316 ----ERAVKTKKGLTSRQPTGARPTFDM----------LMGYNMVEEQTVWGNRVAGLRN 361
Query: 391 AAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRIN------KMPLKERMELLSDV 444
AS LG + AL + + S ++R+ R D
Sbjct: 362 LWTASKLGAAVVSALTDSVYASMAASYNAMSPARVLRRMLSEVMKPSKSEASRKLWAQDF 421
Query: 445 GLYAEGVVAHGRNMMEGSDAFQ--IGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGR 502
G AE + + + +F L + SG + +S
Sbjct: 422 GFGAEFALDRMAMTSDYTQSFGGHRSRNLAEAVMVVSGMNQWTQSARASFQF-------- 473
Query: 503 MTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNL 562
T + RA D R +
Sbjct: 474 ------------------------------EFATALTRAADSKWSDLPEKMRNSMGRYGI 503
Query: 563 KDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMH 622
++D +A K + ++
Sbjct: 504 TESDWAAIAAAPRTNYKGNKMIDPRNM----------------------------DAELQ 535
Query: 623 ALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDL 682
++ V A+ T + K G GE R F + P +N
Sbjct: 536 TKLVGMVDGETMMAVPTPDARTRAFMAGGTKSGNFGGELHRSLFMFHSFPITTIMNQWRR 595
Query: 683 SNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPS---LPEVIYDGTLAN 739
+ K GA ++ I AT L G+G+ K +L G+ P P++ +G
Sbjct: 596 VFTGKGYSGAFDRMSAAAIMVGATSVL-GVGIIQAKDILNGKKPRSMSDPKLWIEGMAQG 654
Query: 740 GALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIR 799
G+ D + S + GPV + + +A ++A D E++
Sbjct: 655 GSFNYIGDLMRNAASGYSHDMTSYVGGPVLAYGDWVAMTAADMAKGDAESAMARTANFAT 714
Query: 800 KTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK----KGIELFQNMDEGLPH 855
+ +PF N+WY K + D L++++I +P Y +Q +K +K E + + G
Sbjct: 715 QQIPFNNLWYTKIATDRLLMDRIRRLSDPEYDKKQLNKMRKMQRTSQQEYWWSPPIGGQS 774
Query: 856 RLPFPFGE 863
+ PF E
Sbjct: 775 NIESPFEE 782
>gi|48696644|ref|YP_024423.1| hypothetical protein VP2p19 [Vibrio phage VP2]
gi|40950042|gb|AAR97633.1| hypothetical protein [Vibrio phage VP2]
Length = 782
Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats.
Identities = 147/848 (17%), Positives = 267/848 (31%), Gaps = 118/848 (13%)
Query: 48 RLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGS 107
L ED + + I YK+ + + V + AL L
Sbjct: 21 TDTDLITAEDIADAIKGKKQEKIA-VYKQAEAIKKGNEVLTQSKDPASALLGMLSRDPNE 79
Query: 108 --AEVPLEMKIKAAETKVLSKFNEYAE--------------VGSKNLGFTLDKQFGLDVF 151
+ + +I A +K +++ G + L ++ D
Sbjct: 80 EVKFLSADQRINAIRAVSKAKISDFMADLAPTTRQIFAGIATGERRL-TKSQQRLLDDFV 138
Query: 152 DEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKK 210
E+ G++T N A + K + + +L+++ +AG ++ +PQ + +
Sbjct: 139 HELYGRQTGNADALKAAKGWKKATEDLNARFGQAGGHMAELDDWRLPQKHNRMAISKAGA 198
Query: 211 DDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKR 270
D +V + D +D + + + V+ V ++ S +
Sbjct: 199 DVWVEKVWDLIDRDKMVKKLRKGKDEDNLREALYSVYNNIVTDGMSSSKTL-SKKFTDMM 257
Query: 271 EFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMI 330
ER FKDS + + Y FG TNV + + ++S+ I + GP+ D +
Sbjct: 258 RSERFITFKDSDSWLKYQREFG-DTNVYASMLGHIDNMSRAIGMMETFGPDPDIGFNTL- 315
Query: 331 VQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRS 390
+ G + R ++ +M Y E T W N +AGLR+
Sbjct: 316 ----ERAVKTKKGLTSRQPTGARPTFDM----------LMGYNMVEEQTVWGNRVAGLRN 361
Query: 391 AAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRIN------KMPLKERMELLSDV 444
AS LG + AL + + S ++R+ R D
Sbjct: 362 LWTASKLGAAVVSALTDSVYASMAASYNAMSPARVLRRMLSEVMKPSKSEASRKLWAQDF 421
Query: 445 GLYAEGVVAHGRNMMEGSDAFQ--IGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGR 502
G AE + + + +F L + SG + +S
Sbjct: 422 GFGAEFALDRMAMTSDYTQSFGGHRSRNLAEAVMVVSGMNQWTQSARASFQF-------- 473
Query: 503 MTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNL 562
T + RA D R +
Sbjct: 474 ------------------------------EFATALTRAADSRWSDLPEKMRNSMGRYGI 503
Query: 563 KDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMH 622
++D +A K + ELQ +L + E + +
Sbjct: 504 TESDWAAIAAAPRTNYKGNKMID-----PRNMDAELQTKLVGMVDGETMMAVPTPDARTR 558
Query: 623 ALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDL 682
A + K G GE R F + P +N
Sbjct: 559 AFMAG-----------------------GTKSGNFGGELHRSLFMFHSFPITTIMNQWRR 595
Query: 683 SNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPS---LPEVIYDGTLAN 739
+ K GA ++ I AT L G+G+ K +L G+ P P++ +G
Sbjct: 596 VFTGKGYSGAFDRMSAAAIMVGATSVL-GVGIIQAKDILNGKKPRSMSDPKLWIEGMAQG 654
Query: 740 GALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIR 799
G+ D + S + GPV + + +A ++A D E++
Sbjct: 655 GSFNYIGDLMRNAASGYSHDMTSYVGGPVLAYGDWVAMTAADMAKGDAESAMARTANFAT 714
Query: 800 KTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKK----KGIELFQNMDEGLPH 855
+ +PF N+WY K + D L++++I +P Y +Q +K +K E + + G
Sbjct: 715 QQIPFNNLWYTKIATDRLLMDRIRRLSDPEYDKKQLNKMRKMQRTSQQEYWWSPPIGGQS 774
Query: 856 RLPFPFGE 863
+ PF E
Sbjct: 775 NIESPFEE 782
>gi|146276496|ref|YP_001166655.1| hypothetical protein Rsph17025_0444 [Rhodobacter sphaeroides ATCC
17025]
gi|145554737|gb|ABP69350.1| hypothetical protein Rsph17025_0444 [Rhodobacter sphaeroides ATCC
17025]
Length = 830
Score = 317 bits (812), Expect = 5e-84, Method: Composition-based stats.
Identities = 118/821 (14%), Positives = 270/821 (32%), Gaps = 95/821 (11%)
Query: 57 DFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSA--EVPLEM 114
D ++ ++ + + + Q L + AL N L GS +
Sbjct: 51 DLKEAFRKAKTSRLHKVVNQLQAMRRLRAQIEQAPDPAVALRNLLEHSDGSGYTGESVRS 110
Query: 115 KIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
+A E + + + VG +G + + D+ E+ + + N QA +
Sbjct: 111 ISEAYEASINAGLRDTLETVGLNVIGSSRNPVLLRDLIRELHAEASGNAQAKAMADAVRT 170
Query: 174 TQRELHSQAHEAGLDYKFF-ENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID-- 230
Q+ + + G D + +P +R + + + L R D +
Sbjct: 171 VQQRMRRAFNSYGGDIGEIADYGVPHSHDAGAMRQAGFEAWAAEIEQRLAWDRIVDFNTG 230
Query: 231 ------GTPLSRSEIASFVGEVFAERVRST-SFKDPS--IPSSEVGVKREFERVFHFKDS 281
G R+ F+ +V+ V +DPS + + +R R+ HF+
Sbjct: 231 QPFAAPGQVPPRAVSGRFLKDVYEGIVTRGWDDRDPSLAVGGKALANQRAERRLLHFRSG 290
Query: 282 QAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEAS 341
++Y + FG S + + + L L++D+ + R LGP+ + ++ Q
Sbjct: 291 SDWIEYNKAFGASDPF-SAMMNGLHGLARDVALMRVLGPSPKAGLEY-AAQVAKKRAATI 348
Query: 342 AGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHP 401
K+ ++K+ L + GWA + +G R+ + LG
Sbjct: 349 GNQKLEARVDTQSKVAKAMLMHLD-----GSANVPDRAGWAAFFSGTRAVLTSIQLGSAV 403
Query: 402 IGALLEDGFISRQMLS-RVGIDKEAIQRINKMPLKERMELLSDVGL---YAEGVVAHGRN 457
+ ++ + ++ S + + + M + E + +G
Sbjct: 404 LSSVSDVATMTAAAHSVGLSATSVLGRSVQLMASQATRETAARMGYVAGALADAGGGASR 463
Query: 458 MMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADP 517
I ++ + +G ++ R + + + + D+ A
Sbjct: 464 YFGQLFGTGIPARMAGFTLRATGLSFVTDMRKLAWQMEFSGYMAENAGR--TFADIDAPL 521
Query: 518 RLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKI 577
R + + D+ +++
Sbjct: 522 RQLFERR----GITAADWDLLRD------------------------------------P 541
Query: 578 AYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAM 637
A+ ++ + +SP Q ++ +E + + + ++ A +L+ ++ ++
Sbjct: 542 AFRFREPGGADFVSPIYWLHAQNRIPHVEAEGLAM-------RLQAAILEELEFAIP--- 591
Query: 638 HTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALN 697
T+ + + L T G+ AGE +R + + + LN S P +
Sbjct: 592 -TASIEGRALLQGTAAPGSVAGELMRSSMSYKSFSLSLMLNQYRRFASLPTPWDKAKYAA 650
Query: 698 HVWIQYSATMALAGIGVASIKALLRGEDPSL---PEVIYDGTLANGALLPYMDRLTKLVS 754
+ S + + G +K L +G DP + G L + D + S
Sbjct: 651 ----KVSTLLLVTGAMAIQLKELAKGNDPRPMDENKFWLAALFQGGGLGIFGDFFSAETS 706
Query: 755 KGDRAAIGGLLGPVPSMVTNL----TSSAVELATKDNENSKVNATKAIRKTLPFMNM-WY 809
+ + GPV +L S+ ++ + +R+ PF++ WY
Sbjct: 707 RVGGGLAETIAGPVVGAAGDLLKPVASNITRAVQGEDTLVGRDVAALVRRNTPFLSSAWY 766
Query: 810 LKNSFDHLILNQILEELNPG----YLDRQQSKKKKKGIELF 846
+ ++ L+ +++ L+P + R + K G + +
Sbjct: 767 ARTAYSRLVADELQAFLDPEAEVLFRRRMKKMAKDYGTQPW 807
>gi|291334971|gb|ADD94604.1| hypothetical protein [uncultured phage MedDCM-OCT-S08-C233]
Length = 530
Score = 282 bits (721), Expect = 2e-73, Method: Composition-based stats.
Identities = 117/568 (20%), Positives = 217/568 (38%), Gaps = 85/568 (14%)
Query: 310 KDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEV 369
+++ + LG +++ A + G ++ + + + +
Sbjct: 5 RNMGMIDSLGTKPKQNFEKI---RYAIQERLIDGERLNAAQSISSYAPFDKYMKVVDGSI 61
Query: 370 MRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGF----ISRQMLSRVGIDKEA 425
G A W A R+ + LG I A + G +S Q S +G E
Sbjct: 62 HTIEGGSIGFGVAKWSAITRAVGNTAKLGGAVISAAADLGIYGSEMSFQGRSFLGGMYEG 121
Query: 426 IQRI-NKMPLKERMELLSDVGLYAEGVV-------AHGRNMMEGSDAFQIGHKLHSKMHK 477
+ + + +++ +L+ +G A+GVV G N+ +G Q ++ +
Sbjct: 122 FKGLARRKNTQDKKDLVEGMGFLADGVVYDVSGRHTVGDNLTKGWTRIQRTFFKYNLLSW 181
Query: 478 WSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFF--KQLDDTDF 535
W+ + N + M + YA K+L D +L+ ++ FF +D +
Sbjct: 182 WTNT-------------LKENSMLGMANYYAKQKNLSFD-KLNKPLQEFFGLYNIDSVKW 227
Query: 536 TVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQR 595
VI++ + DG + + + + DAD++ + + +
Sbjct: 228 DVIRKNGMAKADDGTEFI-NIANLDQISDADIKKITGIDN-------------------- 266
Query: 596 QELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYK-- 653
L + E+ I KDK + ++LD +V D + G++T
Sbjct: 267 ---------LSKTELQIEKDKFKYSVSGILLDRSIYAVIEP------DARVKGIMTQGLL 311
Query: 654 RGTRAGEALRMFQQFTTTPTGMFLNILDLSNS------------AKMPKGASMALNHVWI 701
GT GEA+R QF P + +L + + +
Sbjct: 312 AGTGMGEAIRFVGQFKAFPMSIMNKVLGREMAYIRKGKKLGGLSTEAGRAEIGRGIRGMA 371
Query: 702 QYSATMALAGIGVASIKALLRGEDPSLP---EVIYDGTLANGALLPYMDRLTKLVSKGDR 758
T G ++K LL+G++P P + I G L G L Y D L K +
Sbjct: 372 ALVITSGFMGYMAMTMKDLLKGKEPRDPTKFKTIMAGFLQGGGLGIYGDVLFKEQ-RDAG 430
Query: 759 AAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLI 818
+ I GL+GP P+ V +L + + S A +AI +PF+N++Y+K +FD+LI
Sbjct: 431 SVIAGLVGPAPTTVVDLGLALQYALLGEGGKSGKAAYRAISSNIPFLNLFYIKIAFDYLI 490
Query: 819 LNQILEELNPGYLDRQQSKKKKKGIELF 846
QI+E +NPG L + + + KK + +
Sbjct: 491 GFQIMETVNPGVLKKVERRMKKDYNQEY 518
>gi|320175032|gb|EFW50145.1| 17 [Shigella dysenteriae CDC 74-1112]
Length = 236
Score = 241 bits (614), Expect = 4e-61, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 11/234 (4%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVS------LDGKGLSKAERYRLAGLKA 54
M+ ECIQ + +AA R L+ +E++ +ED I R S + + LS++ER A A
Sbjct: 1 MRQECIQAVQQAAQRTLTAREIQNIEDRIYRNMRSIARDDTMSWRQLSESERLYRAAQLA 60
Query: 55 EEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAG--SAEVPL 112
E+ Q+E R +L ++ Q G GK AL + F A S + +
Sbjct: 61 SEELQREAALKKRRVALTIAARQRLDKFINSYQ-GADGKLGALNRTIAFNADGKSNFLSV 119
Query: 113 EMKIKAAETKVLSKFNE-YAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
E + KA LS+ E + V + G D+ D+ EM+G+ T N +A + K +
Sbjct: 120 ESRTKATREYALSQLQEAFEAVDPRFFGLFEDEAGVRDLVYEMRGQNTGNAKARKGAKAW 179
Query: 172 FETQRELHSQAHEAGLDYKFFENR-IPQPMSVDKLRATKKDDFVRSMLDWLDLS 224
E L + ++AG D + EN IPQ S++K+ A KD +V ++ LD
Sbjct: 180 REVTELLRRRFNDAGGDIGYLENWGIPQHHSMEKVGAVSKDKWVSDVIGKLDRR 233
>gi|288959378|ref|YP_003449719.1| hypothetical protein AZL_025370 [Azospirillum sp. B510]
gi|288911686|dbj|BAI73175.1| hypothetical protein AZL_025370 [Azospirillum sp. B510]
Length = 995
Score = 198 bits (502), Expect = 4e-48, Method: Composition-based stats.
Identities = 116/680 (17%), Positives = 238/680 (35%), Gaps = 49/680 (7%)
Query: 3 PECIQVLNKAAGRELSKKELR-RLEDGIVRAYV-SLDGKGLSKAERYRLAGLKAEEDFQK 60
+C+ + AAGR+LS ++ LED +RA + LS+AE YR A +A + +
Sbjct: 4 QDCLGEIRGAAGRDLSDDDIHVMLEDIQLRADRMRRERVDLSQAELYRAAAREAGAEAEM 63
Query: 61 ELIRSVNDAIDEAYKRHQLRSDLDRVQA-----GVYGKSQALFNKLFFKAGSAEVPLEMK 115
+A KR R + A G+ +A + + + + +
Sbjct: 64 AARIEARNAKLNLVKRVARREFYEAAPAVGSRPGILIGLEAKLVGVNTPFSGSRLSVAAQ 123
Query: 116 IKAAETKVL----SKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKK-----TQNEQASR 166
A + ++F+ + G +D+Q ++F+ + + T ++ A+
Sbjct: 124 QNALRRDYMVGLTTEFDRAGLYETVRSG-AIDRQIARELFELSRAEGGAPGVTGSKPAAE 182
Query: 167 LVKQYFETQRELHSQAHEAGLDYKFFENRIPQP-MSVDKLRATKKDDFVRSMLDWLDLSR 225
+ Q + G ++ I + DK+R + + ++ LD
Sbjct: 183 AAGIIAKYQALAREALNREGAWIGQYDGYIARTAHDPDKIRRATFEGWRDQVVKLLDERT 242
Query: 226 YKDI-DGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKR-EFERVFHFKDSQA 283
++ I D R + V V FKDP+ S KR RV H++D+ A
Sbjct: 243 FEGIADRERFLRGVYNALVTGVHLTPDGMQGFKDPAFKGSGNIAKRLSQGRVLHWRDADA 302
Query: 284 HMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAG 343
MDY FG V +L L +++ + RE G N + + ++
Sbjct: 303 WMDYQAAFGHGNLVEAVLRG-LDQAARNTALMREFGTNPRGEFDADMQALAESWRD---- 357
Query: 344 NKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVE-NTGWANWMAGLRSAAGASMLGQHPI 402
+D KL ++ + ++ + ++ N A A +R+ S LG +
Sbjct: 358 ----RDPDAVVKLGEARKWLANRFDELDGTSSMPVNRLGARIGASVRAWESMSKLGGATL 413
Query: 403 GALLEDGFISRQMLSRVGIDKEAIQ-------RINKMPLKERMELLSDVGLYAEGVVAHG 455
A+ + F + ++ + E R E++ + +EG++ H
Sbjct: 414 SAVTDVPFKASELRYQGINLLEGYADGVQSLIRGRGRSDSGTREIIDLLRAGSEGMLGHI 473
Query: 456 RNMMEGSDA-FQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLK 514
+ D KL + +WSG Y + + I+ +GR+ T L
Sbjct: 474 AGRFDAQDTVPGTLSKLTNVFFRWSGLNYWTDAQRAGAEFIMSRHLGRLQRT--EFAALP 531
Query: 515 ADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMS 574
+ + + ++ ++ + + + TP + D + L +
Sbjct: 532 RQTQRVLT----LFDIKPEEWDALRAGEWVQADGRAH--LTPDAASRMTDQQVDGL--IG 583
Query: 575 DKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVR 634
K+ R+ + + + L+ +LA E + ++ A + V+ R
Sbjct: 584 GKLDGIRQAALDRMEKAVDALDRLESRLAKHE-AAMGKAGPTGADVERATMQATVEGVQR 642
Query: 635 GAMHTSLFDRQRLGLLTYKR 654
+ ++ R
Sbjct: 643 YQRSIQQLRQDMREMVAGSR 662
Score = 194 bits (492), Expect = 7e-47, Method: Composition-based stats.
Identities = 72/418 (17%), Positives = 146/418 (34%), Gaps = 28/418 (6%)
Query: 449 EGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYA 508
+ + ++ D + H +G D +R + + +
Sbjct: 591 QAALDRMEKAVDALDRLESRLAKHEAAMGKAGPTGADVER-----ATMQATVEGVQRYQR 645
Query: 509 SLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLR 568
S++ L+ D R + ++ +++ ++ + L + + LKD +
Sbjct: 646 SIQQLRQDMREMVAGSRTQNEVHQ---HLVREIGYLARAERELAVKAERRVARLKDR-VP 701
Query: 569 DLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDN 628
DK A + + ++ L +L + + + + ++ K+H+ D
Sbjct: 702 AAEAARDKAAAAIEGIHQDMLRHLDELDSLPVRLDEQMSRARDGARADLALKLHSYFSDR 761
Query: 629 VQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSN-SAK 687
+ +V + + + GT GEALR QF P + + +
Sbjct: 762 GEYAVINP----GARERAMLRRGTQAGTLEGEALRFVGQFKAFPVAVISKVWGRDLYGGE 817
Query: 688 MPKGASMALNHVWIQYSATMALAGIGVASIKALLRGE---DPSLPEVIYDGTLANGALLP 744
G + + H + + G +K L +G DP+ P L G
Sbjct: 818 RGWGRAAGIVHTLVA----TTVMGYVAGMLKDLSKGRAPRDPTDPRAWGAAFLQGGGAGI 873
Query: 745 YMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPF 804
Y D L S+ + GP S L + + ++ + K + PF
Sbjct: 874 YGDFLLGQYSRFGNRFLESAAGPTLSSAGELLN--IWAGAREGNDEKAATLRWTLSNTPF 931
Query: 805 MNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIELFQNMDEGLPHRLPFPFG 862
+N++Y + + D+L L Q+ E +NPG+L R + + K + F P R P+G
Sbjct: 932 VNLFYTRMALDYLFLYQVQEAMNPGFLRRFEQRVAKDNNQRF----ILSPSRA-IPYG 984
>gi|190893672|ref|YP_001980214.1| hypothetical protein RHECIAT_CH0004107 [Rhizobium etli CIAT 652]
gi|190698951|gb|ACE93036.1| hypothetical protein RHECIAT_CH0004107 [Rhizobium etli CIAT 652]
Length = 460
Score = 143 bits (359), Expect = 2e-31, Method: Composition-based stats.
Identities = 77/494 (15%), Positives = 157/494 (31%), Gaps = 89/494 (18%)
Query: 271 EFERVFHFKDSQAHMDYMEHFGVST-NVNTILTSELASLSKDIVIARELGPNADSFVKQM 329
RVF F + + + M+ +GV + + + + +++++I LGPN +++
Sbjct: 43 NQLRVFRFDNPETYKRLMKKYGVGSGGLFNTIMGHVQAMAREIAFTEVLGPN----YQRI 98
Query: 330 IVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLR 389
+ G + K R + + ++ A G+R
Sbjct: 99 SRSCCRRRAKMMPGARSAKRIGNRITMNSPGAVQRTYDALSGRLGVAQSELIAGIGGGMR 158
Query: 390 SAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAI-QRINKMPLKER---MELLSDVG 445
+ A+ LG I AL D + + GI + R+ R EL +
Sbjct: 159 NLQTAARLGSATIAALPGDSMTAVLAANYNGIPATNVLARLVTDLTTNREGAEELARQLN 218
Query: 446 LYAEGVVAHGRNMMEGSD---AFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGR 502
L A V+ D + ++ + + +G + + ++ I R
Sbjct: 219 LTAATVLDTAIGTKRFEDEVIGQGVTGRIADGLMRVTGINVWTEGLKRAFSMEFMGTIAR 278
Query: 503 MTDTYASLKDLKADPRLDPSIKAFF--KQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIK 560
++ +LDP + F D+ ++ A + + +
Sbjct: 279 QSEHTFE--------KLDPMFQGFLTRYGFTPADWDKLRVAPHIEADGAKFF-------- 322
Query: 561 NLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNK 620
D + + R++D++ ++ + P+ R
Sbjct: 323 ---DVNAVEDQRLADRLMSAVIDERHFAVVEPDAR------------------------- 354
Query: 621 MHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNIL 680
+RGAM L +RGT GEA+R QF + P + +
Sbjct: 355 ------------IRGAMTGGL-----------QRGTIIGEAVRSATQFKSFPMTYMMTHM 391
Query: 681 DLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPS---LPEVIYDGTL 737
+ + M Q + TM +AG ++ +++L+ G DP P +
Sbjct: 392 MRALTQGMANRTYR-----TTQLALTMTIAGAEMSQMQSLIAGRDPQNMADPRFWEQSFI 446
Query: 738 ANGALLPYMDRLTK 751
G D +
Sbjct: 447 RGGGGGMLADFIYS 460
>gi|291336674|gb|ADD96217.1| hypothetical protein [uncultured organism MedDCM-OCT-S06-C2377]
Length = 333
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 67/368 (18%), Positives = 130/368 (35%), Gaps = 47/368 (12%)
Query: 366 MWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQM----LSRVGI 421
M EV T+ +A W A R+ A + LG I A+ + +++M S VG
Sbjct: 4 MAEVDGSVNTINGFAYAKWGAISRAIAAMAKLGGATISAISDIHLYAKEMKWQGRSYVGG 63
Query: 422 DKEAIQRINK-MPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHK-LHSKMHKWS 479
EA+ R+ K ++ + +G + ++ D G + K +
Sbjct: 64 LAEAMGRLAKIKNTADKNGIAEQLGFINDNIIYDLAARYSAGDNLNRGFSQVQRTFFKLN 123
Query: 480 GAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIK 539
G + L + + + + T S K+L + +++ + I+
Sbjct: 124 GLAWWTNSLKQGAILGMGSYVAKQTK--VSYKNLSPQFKRLIDH----YGINEKIWNHIR 177
Query: 540 RAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQ 599
+ + DG L+ T I +L DA ++D+ +
Sbjct: 178 KMDLDKADDGKLFFNTQK-IDDLSDAVIKDIEGKT------------------------- 211
Query: 600 QQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAG 659
+ +++I + KD + ++ + LD +V + + + + GT G
Sbjct: 212 ----TMSKRQIEVAKDNLKTRVLGMFLDRSTYAVLEPDART----RGWMKMGQQAGTHPG 263
Query: 660 EALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKA 719
EALR QF P + ++ +A G M Q AL G + K
Sbjct: 264 EALRFMTQFKAFPFAFYQKMIGRE-TAAWKDGNKMNAALSMAQLVGGSALFGYMAMTAKD 322
Query: 720 LLRGEDPS 727
+L+G++
Sbjct: 323 ILKGKNLR 330
>gi|262043550|ref|ZP_06016663.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039084|gb|EEW40242.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 143
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 715 ASIKALLRGEDPS--LPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMV 772
K LL+G+ P + G L D + V++ + L+GP S
Sbjct: 1 MQSKLLLKGQTPRPADAKTFLAAASQGGGLGILGDFMFGEVNRMGAGPVTSLMGPAASNA 60
Query: 773 TNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLD 832
++ + + D + + + PF+N+++L+ + + LILN+I + L+PG L+
Sbjct: 61 DSIITLLQQTTRGDAD--LGDWYRTALDNTPFLNVFWLRTAMNGLILNRIQDALDPGSLE 118
Query: 833 RQQSKKKKKGIELFQNM 849
R Q + +++ F
Sbjct: 119 RYQRRVEREQGNDFLIP 135
>gi|291336673|gb|ADD96216.1| hypothetical protein [uncultured organism MedDCM-OCT-S06-C2377]
Length = 101
Score = 111 bits (278), Expect = 4e-22, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 736 TLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNAT 795
L G L Y D L + + +A+ +GP+P+ + S+ + + A
Sbjct: 1 MLQGGGLGIYTDFLFGNI-QNSTSALATAVGPIPTEAARVLSALNYAIKGEGGKAGKQAY 59
Query: 796 KAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDRQQS 836
+I++ +PF+N++Y+K +FD++I Q++E L+PG L +
Sbjct: 60 YSIKENIPFLNLFYIKTAFDYMIGYQMMETLSPGSLKEWRK 100
>gi|315122771|ref|YP_004063260.1| hypothetical protein CKC_05130 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496173|gb|ADR52772.1| hypothetical protein CKC_05130 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 137
Score = 91.2 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Query: 725 DPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSS--AVEL 782
D + P+ + L L + DR + + + PV S + L +
Sbjct: 17 DFTDPKTL---ALLTARTLTHYDRFFNEYHHDFKDLLHAV--PVASTIIGLGDARNIFGE 71
Query: 783 ATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNPGYLDR 833
+ E + N K + +P N++Y K +F +I++ + E N GY +R
Sbjct: 72 DEEKREKANANFAKELANNIPLKNLFYAKAAFQKMIVDNLCEYFNEGYKER 122
>gi|216906074|ref|YP_002333630.1| hypothetical protein ASSaV_gp13 [Abalone shriveling
syndrome-associated virus]
gi|216263167|gb|ACJ71991.1| unknown [Abalone shriveling syndrome-associated virus]
Length = 1194
Score = 90.4 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 116/820 (14%), Positives = 241/820 (29%), Gaps = 118/820 (14%)
Query: 51 GLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQA-------LFNKLFF 103
+ AE+ F + + A + K +L + ++AG + K+
Sbjct: 449 AISAEQIFSFKTEEKIRAAANYNKKVAELSTWETLLRAGTMTGKENNLFSGLDSLGKIRN 508
Query: 104 KAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQ 163
+ +E + VL + K D+ D + +N
Sbjct: 509 VYNATMELVESQSVQPVVSVLEEAQLSLAKLLKVDEGVFQLPAHADIVDGVINPTGKNRY 568
Query: 164 ASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDL 223
S+ + + ++ SQ E GL K + P +++R+ + +F+ M+ +D
Sbjct: 569 NSKSA-IFRQAINKIKSQGIEKGLYSKLDDGWFPNMWDKERIRSVGQAEFIEEMIGLVDE 627
Query: 224 SRY---KDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKD 280
SR G S +G+++ + +S +R+ FKD
Sbjct: 628 SRMRQAVTASGNIYKNS--TDSLGKIYNNIAAD--QRRVKSDASGTLRTLRGDRLLFFKD 683
Query: 281 SQAHMDYMEHFGVS--TNVNTILTSELASLSKDIVIARELGPNA---DSFVKQMIVQTIA 335
+ + FG + + L + + S DIV A G ++ + ++ +
Sbjct: 684 GASWYAAHDLFGSEDVPSAFSALRNFAINASDDIVQA-SFGVHSLEDINTFTNVLHNGLG 742
Query: 336 NDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTG-WANWMAGLRSAAGA 394
N +A + LQ E M G + L++
Sbjct: 743 NMAKAQGLSIDSGKLANLE---------LQFKEAMLLHNGYVLPGKLGRLLGFLKNTTLK 793
Query: 395 SMLGQHPIGALLEDG------FISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYA 448
M + A + D + L R+ + A + KM ER E +
Sbjct: 794 GMTAGAFVPAAVLDPLGNLPIAGTMFGLDRLTSYRSAKTILKKMTKAERNECFFFLKTSI 853
Query: 449 EGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYA 508
+ M+ G ++ + L +K +++ ++ R T
Sbjct: 854 NALTTEVNEMLNGPGKPV---FKSLGRKIFNSSHDLTRKISNNNEVMGAALFSRATH--- 907
Query: 509 SLKDLKADPRLDPSIKAFFK--QLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDAD 566
L +L +AF + ++ D+ ++ K+++ I +
Sbjct: 908 -LNKSTPWTKLSMDYRAFLERFGINRADWDSYRKKKSVTVGGNIDLMSARYLINQGDRSA 966
Query: 567 LRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVL 626
+ + + ++ ++ +P+ + + +I++ + +
Sbjct: 967 VVN--------RFAVAEVGSALFAAPKNTRLGRTAKVRTGATVASIVQSDLVEPFANVAY 1018
Query: 627 DNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSA 686
+N+ + R F QF
Sbjct: 1019 NNILGLGNLQIEHLYAGR--------------------FGQF------------------ 1040
Query: 687 KMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPS-LPEVIYDGTLANGALLPY 745
+ SA + G+ +K LLRGE P+ + + G P
Sbjct: 1041 --------------VINSAHVLFLGLLAVEVKKLLRGEKPAVDSRSLALAMMYAGFSGPT 1086
Query: 746 MDRLTKLVS-KGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPF 804
D L + + G PV A N + + +R LPF
Sbjct: 1087 GDALIEQFMFSSGGINLWGFELPVA---------AGAKLIGKKRNVFLALHRTMRAKLPF 1137
Query: 805 MNMWYLKNSFDHLILNQILEELNPGYLDRQQSKKKKKGIE 844
N N + + L+P + + +K IE
Sbjct: 1138 -NQTLAANILQKYTTDILFALLDPEGAKAYEDRLQKDFIE 1176
>gi|71736491|ref|YP_273928.1| hypothetical protein PSPPH_1691 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557044|gb|AAZ36255.1| conserved domain protein [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 359
Score = 89.3 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 82/265 (30%), Gaps = 23/265 (8%)
Query: 301 LTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQ 360
+ + + KD V+ +LGPNA + + D S + + +
Sbjct: 1 MNGSVHAQIKDTVLTEQLGPNAAQTYRLLHDTAKQKDAGGSGAFAGTEFGATPDMV---- 56
Query: 361 EAMLQMWEVM-RYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRV 419
W V+ N +A + G+R+ A+ L I +++ D S + S
Sbjct: 57 ------WNVLNGSLGVPVNARFAEFNQGIRNFMVAAKLQATLIASVIGD-VQSLAITSAY 109
Query: 420 GIDKEAIQRINKMP--LKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHK 477
++ + K+ + + + + + + + + KL + + K
Sbjct: 110 HGLPIGKTLVSALKSVSKDYRTEAGRMSIGMDSITSDMVSFHTDNLSAGWTSKLANAIMK 169
Query: 478 WSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTV 537
+ E ++ + +++ T + + D+ V
Sbjct: 170 VTLLEGWTNAMRRGFSVEIMSRMAGDTRKAWG-------DDPVLQSRLERHGITQEDWAV 222
Query: 538 IKRAKAMSSPDGYLYARTPSTIKNL 562
+ A TP ++ ++
Sbjct: 223 WQAATPEDWR--GHQMLTPESVASM 245
>gi|212710806|ref|ZP_03318934.1| hypothetical protein PROVALCAL_01874 [Providencia alcalifaciens DSM
30120]
gi|212686503|gb|EEB46031.1| hypothetical protein PROVALCAL_01874 [Providencia alcalifaciens DSM
30120]
Length = 1122
Score = 83.9 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 125/854 (14%), Positives = 281/854 (32%), Gaps = 144/854 (16%)
Query: 26 EDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIR-----------SVNDAIDEAY 74
+ + A + D + + A E + ++ + Y
Sbjct: 359 SEQVGDAMRNNDRHAIPEVAEAARAVRPIVEKTKDRMVELGILREGVTVSTAESYFPRIY 418
Query: 75 KRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKV------LSKFN 128
K ++ +D + + Q + + +KA S+ + I+ A V ++
Sbjct: 419 KFDKILNDRAEFRNIIADWLQEMNQRTVYKAESSLAKADAGIEQARASVPQAEKLNAEIK 478
Query: 129 EYAEVGSKNLGFTLDKQFGLDVF--DEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAG 186
E K + + + E + + +A + K+ E + +A
Sbjct: 479 EAERWSGKKQLLMNEIEKNRKLVAEKEAVSAEIEMRKAKKPTKKL-EQLERKLMRIEDAE 537
Query: 187 LDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDG------TPLSRSEIA 240
+ +DK R ++++ + L+RY + PL+R E+
Sbjct: 538 ---NKLASYQRSLEILDKPRQF-RNEYSQLTRKANSLTRYDNRRHAALRRMEPLAREEVE 593
Query: 241 SFVGEVFAERVRSTSFKDPSIPSSEVGVKREF---ERVFHFKDSQAHMDYMEHFGVSTNV 297
+ ++ + + + S PS + KR R + D + ++ F + ++V
Sbjct: 594 AAADDIINKIIGAPSGIVPSELIPDGLTKRAGFTKSRTLNIPD-----ERIKDF-LESDV 647
Query: 298 NTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLE 357
N ++ + + ++ +I + + G M Q A + + K R KLE
Sbjct: 648 NYVMENYIRQVAPEIELTAQFG------RVDMDAQIKAITNDYNTLISEAKTAKERGKLE 701
Query: 358 VRQEAMLQ----MWEVMRYGETVE---NTGWANWMAGLRSAAGASMLGQHPIGALLEDG- 409
R++A L+ M + + ++ + R +LG I +L +
Sbjct: 702 ARRDADLRDIRAMRDRLLGTYGAPKDPSSFFVRAGRIARHVNFLRLLGGMTISSLPDIAR 761
Query: 410 -FISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIG 468
+ + S + + + I+ M + + L ++G+ E ++ ++ +
Sbjct: 762 PIMQHGLRSALKPLGKMLTDISAMKIAKAD--LREMGVGLEYALSSRSKVIADLNDPYAR 819
Query: 469 HKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFK 528
+ +WS ++ + ++ + + G +T +
Sbjct: 820 RTFLERGLEWSSQKFGNFTLMNQYTDTMKMWTGVVTQS---------------------- 857
Query: 529 QLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSK 588
+++ A+ +S+ + L +++ LA +
Sbjct: 858 -------KILRAAQEVSTGN------------ALSSKEIKKLAHLG-------------- 884
Query: 589 TLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLG 648
+ + + QQ + +L H+ + D VR ++ R
Sbjct: 885 -VDKNMLERIAQQYSKHGEDLDGMLTG------HSHLWD--DRVVRETFQAAVLKDVRTT 935
Query: 649 LLTYKRGTRA----GEALRMFQQFTTTPTGMFLNILD---LSNSAKMPKGASMALNHVWI 701
++T G E ++ QF T G L S A GA + ++ +
Sbjct: 936 VITPGIGDTPLMMSSELGKIVMQFKTFFFGTHNRALVSGIQSGDASFYYGALLQISLGSL 995
Query: 702 QYSATMALAG--IGVASIKALLRGEDPSLPEVIYDG------TLANGALLPYMDRLTKLV 753
Y +AG I + G D S L+ G+
Sbjct: 996 VYVLKSMMAGREINAEPANLVKEGLDWSGMMGWLGEPNNLLENLSGGSYGMSAMFGGPPA 1055
Query: 754 SKG-DRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKN 812
S+ R IG LLGP + ++ + + + ++ + +++RK LPF N++YL
Sbjct: 1056 SRYQSRNGIGALLGPTFDLGGDIQNITAGVMNGEFDDRE---VRSVRKLLPFQNLFYLSP 1112
Query: 813 SFDHLILNQILEEL 826
+LNQ+ E+L
Sbjct: 1113 -----LLNQVEEQL 1121
>gi|218514216|ref|ZP_03511056.1| hypothetical protein Retl8_11184 [Rhizobium etli 8C-3]
Length = 73
Score = 79.6 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 802 LPFMNMWYLKNSFDHLILNQILEELNPGYL---DRQQSKKKKKGIE-LFQNMDEGLPHRL 857
P ++WY K + D LI + I ++P Y DR + + K++ + + +GLP R
Sbjct: 10 TPGSSLWYTKIATDRLIFDNIQAMIDPNYRASFDRYERRMKREFGQAFWWGPGDGLPQRP 69
Query: 858 P 858
P
Sbjct: 70 P 70
>gi|227355848|ref|ZP_03840241.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
gi|227164167|gb|EEI49064.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
Length = 1127
Score = 78.5 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 106/685 (15%), Positives = 228/685 (33%), Gaps = 116/685 (16%)
Query: 172 FETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKD-DFVRSMLDWLDLSRYKDID 230
T + + ++A + + + K R + + L D R ++
Sbjct: 528 QATLQRKLQRINDAENKLPALQRSVDILDNPRKFRNEHRRLTRTANSLTRHDRIRQSALN 587
Query: 231 G-TPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREF---ERVFHFKDSQAHMD 286
TPL R E+ + ++ + + + S PS + VKR +R + D +
Sbjct: 588 RLTPLEREELDAAADDIINKIIGAPSGIVPSELIPDGLVKRAGFTKDRTLNIPD-----E 642
Query: 287 YMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKV 346
++ + + ++VN ++ + + ++ +I + + G M Q A +E +
Sbjct: 643 RIKDY-LESDVNYVMENYIRQVAPEIELTAKFG------RVDMDNQIKAITEEYNQLIAD 695
Query: 347 LKDWLGRNKLEVRQEAMLQ----MWEVMRYGETVE---NTGWANWMAGLRSAAGASMLGQ 399
R++LE R+EA L+ M + + ++ + R +LG
Sbjct: 696 ATTPKERSRLEARREADLRDIRAMRDRLLGTYGAPKDPSSFFVRAGRVARHVNFLRLLGG 755
Query: 400 HPIGALLEDG--FISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRN 457
I +L + + + S + + + I M + + L ++G+ E V++
Sbjct: 756 MTISSLPDMARPIMQHGLRSALKPLSKMLTDIGAMRIAKAD--LREMGIGLEYVLSSRSK 813
Query: 458 MMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADP 517
++ + +WS ++ + ++ + + G +T +
Sbjct: 814 VIADLSDPYSRRSYLERGLQWSSQKFGNFTLMNQYTDTMKMWSGLITQS----------- 862
Query: 518 RLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKI 577
V+K A T +L +++ LA +
Sbjct: 863 ------------------KVLKAA------------NTLDAGGSLSKREIKKLAHIG--- 889
Query: 578 AYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAM 637
+ + + Q +L H+ + D VR
Sbjct: 890 ------------IDESMLKRIADQFKRHGEDLDGMLTG------HSHLWD--DRVVRETF 929
Query: 638 HTSLFDRQRLGLLTYKRGTRA----GEALRMFQQFTTTPTGMFLNILD---LSNSAKMPK 690
++ R ++T G E ++ QF T L S A
Sbjct: 930 QAAVLKDVRTTVITPGIGDTPLMMSSELGKIVMQFKTFFFATHNRALVSGIQSGDASFYY 989
Query: 691 GASMALNHVWIQYSATMALAGIGVAS--IKALLRGEDPSLPEVIY---DGTLANGALLPY 745
GA + + + Y +AG + + + G D S + L N + Y
Sbjct: 990 GALLQVALGSLVYVLKAKMAGRDINTEPANLVKEGLDWSGMMGWLGEPNNVLENLSGGTY 1049
Query: 746 MDRLT---KLVSKG-DRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKT 801
S+ R IG LLGP + ++ + + + ++ + +++RK
Sbjct: 1050 GMSAMFGGPPASRYQSRNGIGALLGPTFDLGGDIKNITSGVLNGEFDDRE---VRSVRKL 1106
Query: 802 LPFMNMWYLKNSFDHLILNQILEEL 826
LPF N++YL +LNQ+ E++
Sbjct: 1107 LPFQNLFYLSP-----LLNQVEEQM 1126
>gi|262043399|ref|ZP_06016524.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039225|gb|EEW40371.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 964
Score = 70.0 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 96/735 (13%), Positives = 208/735 (28%), Gaps = 137/735 (18%)
Query: 114 MKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
+ +AA + + +LG+T ++ + G N + +
Sbjct: 327 RREEAAVVTANKQAYTQYKAEGGDLGYTAFREQVGEALRN--GDVHVNTKVQEAAQAMRT 384
Query: 174 TQRELHSQAHEAGLDYKFFE-------NRIPQPMSVDKLRATKKDDFVRSMLDWLDL--S 224
+ + E GL E + P+ V K+ +++D F ++DW
Sbjct: 385 VINRVKTAQQELGLLPPDAELKAMGQTSYFPRVYKVGKI-VSERDKFRNMLVDWWSRGEK 443
Query: 225 RYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAH 284
D + + I VG + ++ + + R D
Sbjct: 444 TMSREDAEIAADTTINRIVGAKIPQEFA-------NVFMVKAPGSTK-SRTLSVPD---- 491
Query: 285 MDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGN 344
M+ + + ++ N +L + S +I + R G + + + I ++ +A
Sbjct: 492 -RLMKDY-LESDANYVLQRHIREASAEIELTRTFG---NKSLDSQLA-AIQDEYDALMRL 545
Query: 345 KVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVE---NTGWANWMAGLRSAAGASMLGQHP 401
+ + E +L + + + + ++ + A LRSA + LG
Sbjct: 546 RPAEQEKLAKAREADLRDILALRDRLVGTYGMPDDPSSFFVRAGAFLRSANFVTKLGGMT 605
Query: 402 IGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEG 461
+ A+ + L +V N M G
Sbjct: 606 VSAIPD--------------------------------------LARGMMVNGFSNTMRG 627
Query: 462 SDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDP 521
+ + S A + A+ + + T L D +
Sbjct: 628 ----------YGALITRSPAYLASRAEQKKMAVGLETILHTRARTMGDLVDSSS---RTT 674
Query: 522 SIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHR 581
+ +A +++ D + T I +
Sbjct: 675 AAEAGMERITDVFGKLTMMGHFDDMNKSVNGMITSDGILS------------GAFPTKRL 722
Query: 582 KKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSL 641
KL ++ ++ ++E + ++ I + L+ V V + T
Sbjct: 723 AKLGINEKMAERIQREFHKHGEVIQGWHIGNFEKWDDQYAAGLLQSAVLKDVNNTVITPG 782
Query: 642 FDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWI 701
L T G + QF + T + G +
Sbjct: 783 IGDTPLWAS-----TPLG---KTVFQFKSFATASYNRAT---------LGGLQEGTAQFY 825
Query: 702 QYSATMALAGIGVASIKALLRGE--DPSLPEVIYDGTLANGALLPYMDR----------- 748
+A G ++K G D + +++ +G +G L P M+
Sbjct: 826 YGTAFQIGLGSLTYALKQAANGREVDLTPQKMVLEGIDRSGILGPLMEYNNMAEKASGGM 885
Query: 749 -----LTKLVSKG---DRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRK 800
L ++ R IG LGP ++ +T + D + ++R
Sbjct: 886 IGLGPLLGTGTQSRYASRGFIGSALGPTFGLLDTVTDVTAGVLNGD---AGDRVLHSVRT 942
Query: 801 TLPFMNMWYLKNSFD 815
LP N++++ +
Sbjct: 943 LLPGNNLFWVAPLIN 957
>gi|295096859|emb|CBK85949.1| hypothetical protein ENC_24210 [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 963
Score = 70.0 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 96/728 (13%), Positives = 200/728 (27%), Gaps = 123/728 (16%)
Query: 114 MKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFE 173
+ +AA + + + +L F+ ++ + G N +
Sbjct: 326 RREEAAVVVTNKQAYSHYKASGGDLSFSRFREEVGNAMRS--GDVHANPVVQEAAQAMRT 383
Query: 174 TQRELHSQAHEAGL--------DYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDL-- 223
+ + GL E+ P+ V K+ ++D F ++DW
Sbjct: 384 VVNRVKVAQQKLGLLPPDEELKAIGQ-ESYFPRVYKVGKIVN-ERDKFRDMLVDWWSRGE 441
Query: 224 SRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQA 283
+ + + I VG + ++ + R D
Sbjct: 442 KTMSREEAEITADATINKIVGAKIPQDFA-------NVFMVKAAGSTR-SRTLSVPD--- 490
Query: 284 HMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAG 343
M+ + + ++ N +L + S ++ + R G S KQ+ D
Sbjct: 491 --RLMKDY-LESDANYVLQRHIREASAEVELTRAFGN--KSLEKQLKDIQDEYDALMRQN 545
Query: 344 NKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVE---NTGWANWMAGLRSAAGASMLGQH 400
K ++R L+ + + + ++ + A LRSA + LG
Sbjct: 546 PKDQAKLAKARDNDIRDITALR--DRLAGTYGMPDDPSSFFVRAGAFLRSANFVTKLGGM 603
Query: 401 PIGALLEDGF-ISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMM 459
+ A+ + + A+ + R E L + + E ++ M
Sbjct: 604 TVSAIPDLARGVMVNGFGNTMRGYSALITRSPAFKASRAEQLK-MAVGLETILHTRARTM 662
Query: 460 EGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRL 519
D S+ V + R+TD + L + +
Sbjct: 663 G------------------------DLVDGSARTTAVEAGMERVTDAFGKLTLMGHFDDM 698
Query: 520 DPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAY 579
+ S+ T I +
Sbjct: 699 NKSVNG---------------------------MITSDGILS------------GAFAGR 719
Query: 580 HRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHT 639
KL + ++ R E ++ + I + + + V V + T
Sbjct: 720 RLAKLGINDNMAARIRSEFEKHGEVINGWHIGNFEKWDDQHVAGVFQSAVLKDVNNTVIT 779
Query: 640 SLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNI---LDLSNSAKMPKGASMAL 696
L T G + QF + T + + + G + +
Sbjct: 780 PGIGDTPLWAS-----TPLG---KTIFQFKSFATASYNRATLGGLQEGTGQFYYGTAFQI 831
Query: 697 NHVWIQYSATMALAGIGV--ASIKALLRGED------PSLPEVIYDGTLANGALLPYMDR 748
+ Y+ + G V + K +L G D P + + G +
Sbjct: 832 GLGALTYALKQSANGKEVDWSPNKLVLEGVDRSGILGPLMEYNNMAEKASGGMVGLGALL 891
Query: 749 LTKLVSKG-DRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNM 807
T S+ R IG LGP ++ +T + D + +R LP N+
Sbjct: 892 GTGTQSRYASRGFIGSALGPTFGLLDTITDVTAGVLNGD---AGDRVLHNVRTLLPGNNL 948
Query: 808 WYLKNSFD 815
+++ +
Sbjct: 949 FWIAPLIN 956
>gi|119386478|ref|YP_917533.1| hypothetical protein Pden_3771 [Paracoccus denitrificans PD1222]
gi|119377073|gb|ABL71837.1| hypothetical protein Pden_3771 [Paracoccus denitrificans PD1222]
Length = 1099
Score = 68.1 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 112/855 (13%), Positives = 241/855 (28%), Gaps = 140/855 (16%)
Query: 29 IVRAYVSLDGKG--LSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRV 86
+ AY ++ +G +++ E G + ++ A K D
Sbjct: 328 MNEAYKAMRKRGVAMTRTEFNNAVGQAMRRGDRSDIPEVAQAAASIRAKVFDPLKDRAVA 387
Query: 87 QAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQF 146
+ + +F +E + + + F+ ++ DK
Sbjct: 388 AGLLPEGVSVDTAESYFSRVWNRPVIEANEAEFKQILRNYFDGQVTAAAQRAAAETDKAT 447
Query: 147 G------LDVFDEMKGKKTQ-NEQASRLVKQYFETQRELHSQAHEAGLD------YKFFE 193
+ M G++ + + + + + + +A +G+D +
Sbjct: 448 ASLRSAREAIERSMAGRQADASALSDGVARGVADVMSDDAMRAFRSGVDTLAGRVVGELD 507
Query: 194 N----RIPQPM-SVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFA 248
++ + ++ L + D++ D RY D EI V EV
Sbjct: 508 EADLAKLAKIDADLEALGRRGEYDWLSDA----DRKRYLD---------EIVDSVYEVVT 554
Query: 249 ERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASL 308
R IP+ + ER FH D + +E F + +N + I+ +
Sbjct: 555 GRALDADLPSNIIPTKRGPL---AERTFHIPD-----ELVEKF-LDSNADLIMRRYARVM 605
Query: 309 SKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWE 368
S D+ + G V DQ A ++ K+ + +Q A L E
Sbjct: 606 SADVELQTRFGS-----VTMKDQIKTIRDQYAQIRAELEKNTELPETAKQKQLAKLAAKE 660
Query: 369 VMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQR 428
+ RS A G I+ ++ +
Sbjct: 661 KSDIEDIQAVRDMLRGTYNARSQTTA-------------FGRIANAAMTFNYLRTLGGVT 707
Query: 429 INKMPLKERMELLSDVGLYAEGVVAHGRNMMEG----SDAFQIGHKLHSKMHKWSGAEYL 484
I+ + R ++ + Y E + M+G + + K+ A
Sbjct: 708 ISSLTDAVRPAMVHGLKSYMEDGLKPLIRNMQGIKLAKKEAKEAGAISEKILHSRLATLA 767
Query: 485 DKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAM 544
D + + + + + L ++ A T ++K A+ +
Sbjct: 768 DLTDPYAQGSPFERFLQNASVGFTKMTGLLHWNDFQKTLAA-----TMTQNRILKNAEIV 822
Query: 545 SSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLAD 604
+ L A+ +A + + +P + ++
Sbjct: 823 ADR----------GFDALPKAEQAYMAYLG-----------LGRDGAPLLGRLFREHGQV 861
Query: 605 LERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRM 664
+ + + +V ++ + + ++ + + + + + + T RM
Sbjct: 862 I--DGVRVANSEVWPAEMDHMVRSWRAAINKDVDSIIVTKGVADVPLFASTTVG----RM 915
Query: 665 FQQFTTTPTGMFLNIL--DLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLR 722
QF + +L L G M+ G + +K L
Sbjct: 916 ALQFRSFALASNQRVLLRGLQEDQTRFWGG-----------VVGMSAIGAFIYMLKQLES 964
Query: 723 GEDPSL-PEVIYDGTL-----------------ANGALLPY--MDRLTKLVSK------- 755
G + S P L G Y S+
Sbjct: 965 GREISDNPGTWVAEGLDRSGIFSLAFEVNNALEKAGGFGIYNAAAAAFPGKSQKAPASRF 1024
Query: 756 GDRAAIGGLLGPVPSMVTN---LTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKN 812
R + GP + L S + A D + + + +R+ PF ++ Y +
Sbjct: 1025 ASRTGYASMFGPTYELGEGAYGLMSMGLRAARGDLDMTAGD-VGTLRRMTPFASLPYWRW 1083
Query: 813 SFDHLILNQILEELN 827
D I+N + E L+
Sbjct: 1084 LIDGQIVNPLKESLS 1098
>gi|301021601|ref|ZP_07185598.1| hypothetical protein HMPREF9551_01224 [Escherichia coli MS 196-1]
gi|299881535|gb|EFI89746.1| hypothetical protein HMPREF9551_01224 [Escherichia coli MS 196-1]
Length = 614
Score = 68.1 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 75/585 (12%), Positives = 154/585 (26%), Gaps = 147/585 (25%)
Query: 294 STNVNTILTSELASLSKDIVIARELGPNA------------DSFVKQMIVQTIANDQEAS 341
++VN +L + + +I + R G DS ++++ + A E+
Sbjct: 107 ESDVNYVLQRHIREAAAEIELTRTFGKRTMTERLQLIEDEYDSLLREVPEKIKAKYDESV 166
Query: 342 AGNKVLKDWLG--------------------RNKLEVRQEAMLQMWEVMRYGETV----- 376
A K + G + + + + + ++ + +
Sbjct: 167 ANLKARYESNGEVVPQGKLDSLMRKYEKELRKEQSRLSKSRANDLRDITALRDRLVGTYG 226
Query: 377 ----ENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKM 432
++ + A LR + LG + A+ + + K +I++
Sbjct: 227 MPDDPSSFFVRAGAFLRDVNFTTKLGGMTVSAIPDLA-RGVMVNGFRNTMKGYASQISQS 285
Query: 433 PL-KERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISS 491
P K E + +G+ E V+ +
Sbjct: 286 PAFKASKEEMLKMGIGLETVLHSRSRAIGDLVDSSSRTTAVEA----------------- 328
Query: 492 HALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYL 551
+ R+TD + L + ++ S M DG L
Sbjct: 329 -------GMERITDAFGKLTLMDRFNDINKS------------------MNGMVISDGIL 363
Query: 552 YARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEIN 611
P A KL + ++ R E ++ ++ I
Sbjct: 364 SGAFP---------------------ARRLAKLGINDNMAARIRSEFEKHGEVIDGWHIG 402
Query: 612 ILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTT 671
+ + V V + T L T + R QF +
Sbjct: 403 NFDKWDDQYVAGVFQSAVLKDVNNTIITPGIGDTPLWAST----SWG----RTIFQFKSF 454
Query: 672 PTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGED------ 725
T + L G + +A G V ++K +G+D
Sbjct: 455 TTASYNRAL---------LGGLQEGTAQFYYGTAFQIALGSLVYALKEASKGKDVDWSPE 505
Query: 726 --------------PSLPEVIYDGTLANGALLPYMDRLTKLVSKG-DRAAIGGLLGPVPS 770
P + GA+ T S+ R + L GP S
Sbjct: 506 KLVLEGIDRSGILGPLMEYNNMAEKATGGAVGLGALFGTGTQSRYASRGFVSSLFGPSFS 565
Query: 771 MVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFD 815
+ ++ + D +R T+P N++++ +
Sbjct: 566 LADSIIDVTSGVLNGD---VGDRIVHNVRTTIPGNNLFWIAPLIN 607
>gi|259418630|ref|ZP_05742547.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259344852|gb|EEW56706.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 1302
Score = 64.2 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 118/809 (14%), Positives = 243/809 (30%), Gaps = 142/809 (17%)
Query: 50 AGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAE 109
+G A K+L S D ++ Y R L +
Sbjct: 578 SGELAAALDTKKLSISRRDGMEADYMREALEEMGYLPEGSTVNDLYDALRS-AAGGEKIY 636
Query: 110 VPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQA----- 164
E + + + ++F E E ++ +D+ + D+ + +KTQ +A
Sbjct: 637 SSRENPFELSRFQAANEFAEAMEEMGIDITEPIDRIIA-QLPDKARNQKTQGAKATEAER 695
Query: 165 ---SRLVKQYFETQRELHS--QAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLD 219
+ R L + + EA +N I P ++++A + D +RS+L
Sbjct: 696 SGKKAGKEDVSADVRALRALDRLDEANARLAELKNDIG-PKVQEEIKAAQAD--LRSILP 752
Query: 220 WLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKR-EFERVFHF 278
L ++ + ++ + E + VRS P S E + RV
Sbjct: 753 ELRKAKKAQSAEEFYANADDLQ-IEEAVTDTVRSLLNLKPGQHSYEATLSSPTRARVLDV 811
Query: 279 KDS--QAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAN 336
D + ++ +N I++ + D+ + R+ G + +Q I + IA
Sbjct: 812 DDLVLEPWLE--------SNAEAIMSQYFRQMVPDLELTRQFGDAEMTVARQRITEEIAR 863
Query: 337 DQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASM 396
+ + + K + + + R + + M + +R V W+ G R+ S
Sbjct: 864 NMQDAKSAKDRVRI--QEEGQERLKDLEGMRDRLRNRYGVPENPRNGWVQGGRALRTVSY 921
Query: 397 ---LGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVA 453
LG + A+ + I + R G++ + + +R + L + +
Sbjct: 922 MGYLGGMMLSAIPDIAGI----IGRGGVEGAFGAGVTALTNPKR------MALASRDMAE 971
Query: 454 HGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL 513
G AE+ R + M D Y +
Sbjct: 972 IGA-----------------------AAEWWLNSRAL--------SLAEMFDPYGGGTKM 1000
Query: 514 KADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARM 573
+ R+ F I + ++ ++
Sbjct: 1001 E---RVLGQGARQFSIATGMIPWNIGWKSVGGAAVASKMSKAADAVRG------------ 1045
Query: 574 SDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSV 633
K + + + P + + QL D+ ++K L L Q
Sbjct: 1046 -GKATKKQLRTLAENGIEPWMAERIAAQL------------DEFADKGGTLWLPRGQEWT 1092
Query: 634 RGAMHTSL--FDRQRLGLLTYKRG-----TRAGEALRMFQQFTTTPTGMFLNILDLSNSA 686
+ + L+ G + + E + F QF + IL
Sbjct: 1093 DPEAFKAFETAMNREFDLMVITPGQDKPLSFSTEMGKFFGQFKSFALSAHHRIL------ 1146
Query: 687 KMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVI-------------- 732
+ + + T + G A++KA L G +P +
Sbjct: 1147 ---LSGIQRADADVLAQATTALVFGALTANVKAYLGGYEPKEGAAMWEDALDRSGLAGWL 1203
Query: 733 -----YDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDN 787
L+ G + +++ ++ +A+ G LGP V + + N
Sbjct: 1204 MEPYNLAAALSGGKTSITGEPVSRYQAR---SALEGALGP---SVDMMKGGVEAINAFSN 1257
Query: 788 ENSKVNATKAIRKTLPFMNMWYLKNSFDH 816
+ + + + +P N+WYL F
Sbjct: 1258 GKANYRDVRKLMRPIPGNNLWYLLPLFQK 1286
>gi|13186153|emb|CAC33464.1| hypothetical protein [Legionella pneumophila]
Length = 504
Score = 63.1 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 70/493 (14%), Positives = 138/493 (27%), Gaps = 76/493 (15%)
Query: 330 IVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWE-VMRYGETVENTGWANWMAGL 388
+ + G + K N +A +QM + V G V N+ A + +
Sbjct: 66 LRKEFDTQSAGLTGKQAQKLREQYNSNIEDMKAAIQMLQGVYGQGFNVLNSSGAEFFNNV 125
Query: 389 RSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYA 448
+ MLG I +L + G + + + I + K + +G
Sbjct: 126 MNWNYTRMLGHMTISSLPDLGMLVMRN-GLMATLAHGIGESFSVVKKISKNDIKALGYAI 184
Query: 449 EGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYA 508
E + Y++ +S++ + +T +
Sbjct: 185 ETELGTQIK------------------------TYIEHSGLSTNPSPFTKGLNSLTRAFG 220
Query: 509 SLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLR 568
+L + + ++ ++ T+ K S I N +++
Sbjct: 221 NLSLMNPWTDMIQNMAGHIA-INRILTTIHKVVNGESVAKKETTLLARLGISNEYFSEIA 279
Query: 569 DLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDN 628
+ + N +P + L+ A + + I
Sbjct: 280 KFTKDNVYKGTRYADWTNWDIKTPSELNALKAFQAAVGKSIDEI---------------- 323
Query: 629 VQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNI----LDLSN 684
+ + LL +RG G + QF + I + N
Sbjct: 324 ----------SLSPNLGDKPLLLQQRGAF-GHMTNLMFQFKSFLFAATNRIFYSGIQNRN 372
Query: 685 SAKMPKGASMALNHVWIQYSATMALAGIGVASI--KALLRGEDPSLPEVIYDGTLANGAL 742
+ GA + + Y + L G + K LL + I G
Sbjct: 373 DINLYLGAVSMMGLGMLGYVVSSHLRGNKEIDLSTKNLL--REGVDRSGILAIF---GEG 427
Query: 743 LPYMDRLT--KLVSKG-DRAAIGGLLGPVPSMVTNLTSS-----AVELATKDNENSKVNA 794
+ +L VS+ R A G +LGP V+ L S + A + A
Sbjct: 428 INIGQKLFQLGEVSRYKSRDAFGSVLGPTGGSVSQLVSLFNKLNPLSTAKGEWTTKDAEA 487
Query: 795 TKAIRKTLPFMNM 807
+ + +PF +
Sbjct: 488 ---VMRLMPFAKL 497
>gi|291336675|gb|ADD96218.1| hypothetical protein [uncultured organism MedDCM-OCT-S06-C2377]
Length = 106
Score = 62.7 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 234 LSRSEIASFVGEVFAERVRSTS----FKDPSIPSSEVGVKREFERVFHFKDSQAHMDYME 289
++ + F+ + +R+ + + + + + +RV HFK S +Y
Sbjct: 1 MTPEAMDRFLSRAYNSLIRNENQIVNGAGDTFGARSMVKQLGAKRVLHFKSSDDWFEYNT 60
Query: 290 HFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAN 336
FG N+ + ++I + +LG N +++ N
Sbjct: 61 MFG-GRNLKEAIFGGFHVAGQNIGMMSKLGSNPQRNYAKIMDLVKTN 106
>gi|218514496|ref|ZP_03511336.1| hypothetical protein Retl8_12732 [Rhizobium etli 8C-3]
Length = 182
Score = 62.3 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 5/143 (3%)
Query: 271 EFERVFHFKDSQAHMDYMEHFGVSTN-VNTILTSELASLSKDIVIARELGPNADSFVKQM 329
RVF F + + + M+ +GV + + + + +++++I LGPN +++
Sbjct: 43 NQLRVFRFDNPETYKRLMKKYGVGSGGLFNTIMGHVQAMAREIAFTEVLGPN----YQRI 98
Query: 330 IVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLR 389
+ G + K R + + ++ A G+R
Sbjct: 99 SRSCCRRRAKMMPGARSAKRIGNRITMNSPGAVQRTYDALSGRLGVAQSELIAGIGGGMR 158
Query: 390 SAAGASMLGQHPIGALLEDGFIS 412
+ A+ LG I AL D +
Sbjct: 159 NLQTAARLGSATIAALPGDSMTA 181
>gi|294490696|gb|ADE89452.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 1129
Score = 53.1 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/360 (14%), Positives = 109/360 (30%), Gaps = 54/360 (15%)
Query: 498 NQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKR-----AKAMSSPDGYLY 552
+G M ++ +K R + + T I ++ ++ G +
Sbjct: 777 KSLGPMVSMLKNMDSVKIATRDLREMAVGLDYVLSTRTKAIADLTDPYSRRSAAERGLNW 836
Query: 553 ARTPSTIKNLKD---ADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKE 609
L + + L+ + M + + S + + + + +
Sbjct: 837 MTQKFGNWTLMNQWNSALKSWSGMIVQSRILDAARQVSAGGTLSKSEMRKMAQVGINEDV 896
Query: 610 INILKDKVS---NKMHALVLDNVQT----SVRGAMHTSLFDRQRLGLLTYKRGT----RA 658
+ + ++ M L+ + R +++ ++T G +
Sbjct: 897 LRRIGEQFGKHGEDMDGLLTGHSHLWDDRFAREIFQSAVLKDVDSVIVTPGVGDTPLFFS 956
Query: 659 GEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIK 718
E +M QF T +L G ++ T+AL + +K
Sbjct: 957 KEGWKMITQFKTFIFAQHNRVLV--------SGIQQGDAAFYLGALGTIALGSMVYM-MK 1007
Query: 719 ALLRGED---------------------PSLPEVIYDGTLANGALLPYMDRLTKLVSKG- 756
L G D S P + ++ G VS+
Sbjct: 1008 QKLSGRDIDYSWNNLVKEGIDRGGMLGWLSEPLNTVE-NISGGRFGLGAMFGAPPVSRFQ 1066
Query: 757 DRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDH 816
R AIG LLGP + + + A + + ++ + +A + K LPF N+W + +
Sbjct: 1067 SRNAIGALLGPTFDLGGDAATVANGVLNGEFDSQQTHAVR---KMLPFQNLWAISPLLNK 1123
>gi|301046396|ref|ZP_07193556.1| conserved domain protein [Escherichia coli MS 185-1]
gi|300301622|gb|EFJ58007.1| conserved domain protein [Escherichia coli MS 185-1]
Length = 1129
Score = 53.1 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/360 (14%), Positives = 109/360 (30%), Gaps = 54/360 (15%)
Query: 498 NQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKR-----AKAMSSPDGYLY 552
+G M ++ +K R + + T I ++ ++ G +
Sbjct: 777 KSLGPMVSMLKNMDSVKIATRDLREMAVGLDYVLSTRTKAIADLTDPYSRRSAAERGLNW 836
Query: 553 ARTPSTIKNLKD---ADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKE 609
L + + L+ + M + + S + + + + +
Sbjct: 837 MTQKFGNWTLMNQWNSALKSWSGMIVQSRILDAARQVSAGGTLSKSEMRKMAQVGINEDV 896
Query: 610 INILKDKVS---NKMHALVLDNVQT----SVRGAMHTSLFDRQRLGLLTYKRGT----RA 658
+ + ++ M L+ + R +++ ++T G +
Sbjct: 897 LRRIGEQFGKHGEDMDGLLTGHSHLWDDRFAREIFQSAVLKDVDSVIVTPGVGDTPLFFS 956
Query: 659 GEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIK 718
E +M QF T +L G ++ T+AL + +K
Sbjct: 957 KEGWKMITQFKTFIFAQHNRVLV--------SGIQQGDAAFYLGALGTIALGSMVYM-MK 1007
Query: 719 ALLRGED---------------------PSLPEVIYDGTLANGALLPYMDRLTKLVSKG- 756
L G D S P + ++ G VS+
Sbjct: 1008 QKLSGRDIDYSWNNLVKEGIDRGGMLGWLSEPLNTVE-NISGGRFGLGAMFGAPPVSRFQ 1066
Query: 757 DRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDH 816
R AIG LLGP + + + A + + ++ + +A + K LPF N+W + +
Sbjct: 1067 SRNAIGALLGPTFDLGGDAATVANGVLNGEFDSQQTHAVR---KMLPFQNLWAISPLLNK 1123
>gi|315122308|ref|YP_004062797.1| hypothetical protein CKC_02800 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495710|gb|ADR52309.1| hypothetical protein CKC_02800 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 56
Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Query: 797 AIRKTLPFMNMWYLKNSFDHLILNQILEELNPG-------YLDRQQSKKKKK 841
+ T+PF N+WY K+ FD+ + ++ + +NPG Y + ++K+K
Sbjct: 4 VLNTTVPFQNLWYTKSVFDYFVRGKLDDAINPGNRARAEAYRRKNIQREKRK 55
>gi|307180901|gb|EFN68709.1| Laminin subunit beta-1 [Camponotus floridanus]
Length = 2183
Score = 51.1 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 18/187 (9%)
Query: 16 ELSKKELRRLEDGIVRAYVSLDGKGLSKAERY---RLAGLKAEEDFQKELIRSVNDAIDE 72
+L E+ +L D I S L+ +E+ L+ D ++ R+ A+++
Sbjct: 1931 QLEPDEITQLADRIKSIVGS-----LTDSEKILADTKNDLRLAYDLEERANRTKEMALEK 1985
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLF--FKAGSAEVPLEMKIKAAETKVLSKFNEY 130
+++ L+ Q Y A+ K+ + KAA+ + S
Sbjct: 1986 QALVNKVNLLLNDAQTAQYLAQSAIDKAEADVSKSQKDLADIADVTKAAQIQANSTTQSV 2045
Query: 131 AEVGSKNLGFTLDKQFGLDVFDEM--KGKKTQN------EQASRLVKQYFETQRELHSQA 182
+ ++ V E+ + K N + +L ++Y L+ +
Sbjct: 2046 EALDNRLKQLQTQSAKNAFVLKEIAVEANKVGNEAQMIDAKTKKLAEEYKRADESLNQRV 2105
Query: 183 HEAGLDY 189
+++ D
Sbjct: 2106 NKSKGDI 2112
>gi|326479584|gb|EGE03594.1| protein kinase C substrate [Trichophyton equinum CBS 127.97]
Length = 565
Score = 48.8 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 46/359 (12%), Positives = 107/359 (29%), Gaps = 43/359 (11%)
Query: 26 EDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDR 85
ED K + +R A L+ ++ ++ + D + DL+
Sbjct: 151 EDRCKEIGKQWK-KSEEEKKRSYSAALRKRKELAAHASKTEKEMQDRILALEKEAQDLEG 209
Query: 86 VQAGVYGKSQ---ALFNKLFFKAGSAEVPLEMK--IKAAETKVLSKFNEYAEVGSKNLGF 140
A + + + A E+ KA + + E + +
Sbjct: 210 SLADLEAQLETARARNRGKTASGQKQGKAYELAQLAKARTDTLRTVLEEVHLQRDQVVNL 269
Query: 141 TLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPM 200
+ + L F E +E R V+ + + ++ D E P+
Sbjct: 270 LREAEGILSKFKEEYNPNFNDEGVKRAVRSWEDYVARKGEHGSDSFGDDALLEALKPEHD 329
Query: 201 SVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSF---- 256
+ + L Y ++ASF+ A +
Sbjct: 330 EPF----GNPEQWAEEAEPGL---VY-----------KLASFLPAGIANTIEDGLASFRA 371
Query: 257 ---KDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIV 313
+ + S + + R +D++ ++ G ++N + SE+ L +D+
Sbjct: 372 VLVSNGLLADSSLDDSSDEPREV--RDAKDKVN-----GAEVSLN-LKKSEIKDLKRDLE 423
Query: 314 IARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRY 372
+ G DS +++ + I+ D + + + R + + +E +
Sbjct: 424 --EDFGV--DSVFRELKGECISQDSGEYTYELCWMEQTKQKSKKGRADTTMGRFEKISS 478
>gi|326470668|gb|EGD94677.1| hypothetical protein TESG_02185 [Trichophyton tonsurans CBS 112818]
Length = 546
Score = 48.8 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 54/201 (26%), Gaps = 10/201 (4%)
Query: 26 EDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDR 85
ED K + +R A L+ ++ ++ + D + DL+
Sbjct: 151 EDRCKEIGKQWK-KSEEEKKRSYSAALRKRKELAAHASKTEKEMQDRILALEKEAQDLEG 209
Query: 86 VQAGVYGKSQ---ALFNKLFFKAGSAEVPLEMK--IKAAETKVLSKFNEYAEVGSKNLGF 140
A + + + A E+ KA + + E + +
Sbjct: 210 SLADLEAQLETARARNRGKTASGQKQGKAYELAQLAKARTDTLRTVLEEVHLQRDQVVNL 269
Query: 141 TLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPM 200
+ + L F E +E R V+ + + ++ D E P+
Sbjct: 270 LREAEGILSKFKEEYNPNFNDEGVKRAVRSWEDYVARKGEHGSDSFGDDALLEALKPEHD 329
Query: 201 SVDKLRATKKDDFVRSMLDWL 221
+ + L
Sbjct: 330 EPF----GNPEQWAEEAEPGL 346
>gi|83312738|ref|YP_423002.1| hypothetical protein amb3639 [Magnetospirillum magneticum AMB-1]
gi|82947579|dbj|BAE52443.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 614
Score = 47.7 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 72/540 (13%), Positives = 162/540 (30%), Gaps = 94/540 (17%)
Query: 294 STNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGR 353
++V +L +++ D+ +A G I A + SA L R
Sbjct: 130 ESDVEAVLRVYSRTMAPDVELATAFGRADMQDQLDKIASDYARLRVGSADPATLGQLDKR 189
Query: 354 NKLEVRQEAMLQMWEVMRYGETVENTGW-ANWMAGLRSAAGASMLGQHPIGALLEDGFIS 412
+ ++R A ++ Y + +G+ +R+ ++G + +L + G
Sbjct: 190 MRADLRDVAAVRDRIRGTYALPADPSGFIVRTGKVVRNWNYLRLMGGMTVASLADAG--- 246
Query: 413 RQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLH 472
+ + G+ + A + M L A+ G + D+ +
Sbjct: 247 -RAVMVHGMMRVAGDGLVPMVSN-----FRGFRLAAKEAQLAGAALDMVLDSRAM----- 295
Query: 473 SKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDD 532
AE D S + +TD + + + +
Sbjct: 296 ------QLAEVWDDYGRLSK---FERGVKALTDRFGMVSLMAPWNTAM-----------E 335
Query: 533 TDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSP 592
V+ +++ + + +G + + K+ + + D A +
Sbjct: 336 QFAAVVTQSRILQAVEGMA-----KGMHDPKEVEYLAFLGIDDHKAARIGDQFSRHGERQ 390
Query: 593 EQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTY 652
A ++R+ ++ L+ + +H +++ Q + L + T
Sbjct: 391 SGGVMWANTSAWVDREAVDALRAALVKDVHRIIIKPGQD-------------KPLWMST- 436
Query: 653 KRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGI 712
E +M QF T + + + + +L + + + +A +G
Sbjct: 437 -------ELGKMIGQFKTFSIASTQRVALAALQQRDAAALNGSLLSLGLGALSYVAYSGA 489
Query: 713 GVASIKALLRGEDPSL-PEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPV--- 768
G D S P V + LL V+ G GP
Sbjct: 490 ---------SGRDLSDHPAVWAKEAVDRSGLL----FWLSDVNNIGAKVFGYGEGPSRYA 536
Query: 769 -------------PSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFD 815
+ + + + + +S A + + +PF N++YL+ FD
Sbjct: 537 SRSATEALLGPGLGAGLDTSIQVLGDASRGEWRSSDTRALR---RLVPFQNLFYLRRLFD 593
>gi|302508899|ref|XP_003016410.1| hypothetical protein ARB_05809 [Arthroderma benhamiae CBS 112371]
gi|291179979|gb|EFE35765.1| hypothetical protein ARB_05809 [Arthroderma benhamiae CBS 112371]
Length = 450
Score = 46.9 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 24/201 (11%), Positives = 54/201 (26%), Gaps = 10/201 (4%)
Query: 26 EDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDR 85
ED K + Y A L+ ++ + ++ + D + DL+
Sbjct: 36 EDRCKEIGKQWKKTEEEKEKSYS-AALRKRKELAAQASKTEKEMQDRILALEKEAEDLEG 94
Query: 86 VQAGVYGKSQ---ALFNKLFFKAGSAEVPLEMK--IKAAETKVLSKFNEYAEVGSKNLGF 140
A + + + A E+ KA + + E + +
Sbjct: 95 SLADLEAQLETARARNRGKTASGQKQGKAYELAQLAKARTDTLRTVLEEVHLQRDQVVNL 154
Query: 141 TLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPM 200
+ + L F E +E R V+ + + ++ D + P+
Sbjct: 155 LREAEGILSKFKEEYNPNFNDEGVKRAVRSWEDYVARKGEHGSDSFGDDALLDALKPEHD 214
Query: 201 SVDKLRATKKDDFVRSMLDWL 221
+ + L
Sbjct: 215 EPF----GNPEQWAEEAEPGL 231
>gi|126000002|ref|YP_001039673.1| internal virion-like protein [Erwinia amylovora phage Era103]
gi|121621858|gb|ABM63432.1| internal virion-like protein [Enterobacteria phage Era103]
Length = 1294
Score = 46.9 bits (109), Expect = 0.017, Method: Composition-based stats.
Identities = 94/681 (13%), Positives = 197/681 (28%), Gaps = 68/681 (9%)
Query: 160 QNEQASRLVKQYFETQRELHSQAHEAGL-DYKFFENRIPQPMSVDKLRATKKDDFVRSML 218
+A+ + F+ E+ QA EAG + K ++ IP K+ +
Sbjct: 630 GVRKAAEGISDRFKKALEIRKQAGEAGFENVKSAQDYIPALFDGPKIASA---------- 679
Query: 219 DWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPS-SEVGVKREFERVFH 277
++RY + + + + +V + + + S S + + FERV
Sbjct: 680 ----VTRYGTENVEAVLANGYRTGKYKVGRKASEAIAKMQVSRALDSTLSSRLSFERVVS 735
Query: 278 FKDSQAHMDYMEHFGVSTNVNT--ILTSELASLSKDIV--IARELGPNADSFVKQMIVQT 333
+ Q +D + G+ ++ I EL ++ + R +G N + V + VQ
Sbjct: 736 QSERQNFIDGLREAGIPDHIIDDFIEGQELDDVAAAVSSRAMRSMGINTQAEVGGVKVQD 795
Query: 334 IANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAG 393
+ A K+ + EVM + E TG + R+
Sbjct: 796 LLKTNIAEIAENYGKEAAAGAAMARMGFRTRN--EVMAAIDAAERTGRNMGIGAKRAGDE 853
Query: 394 ASMLGQHPI----GALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDV---GL 446
A+ML L +D + +R + I R+N+M + E+ + G+
Sbjct: 854 ANMLRDSVRLLYGNTLDDDPNAAIVKATRRLREVTTITRLNQMGFAQAPEISRALVKMGI 913
Query: 447 YAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDT 506
+ + G + ++G ++H + + + + N +
Sbjct: 914 GP-VMKSVGATKILFGRRGRVGGTAQGELHD----VEMREVEQALGYIGEDNWLHGWATR 968
Query: 507 YASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDAD 566
+ + + K L + + + G T S LK
Sbjct: 969 HDEFN--EDPDNIRKISKVLDNTLAAGSRANLVLSGFKAIQGGSEKIVTRSIAMRLKQHL 1026
Query: 567 LRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVL 626
+ + + L ++ + + + +++ +L
Sbjct: 1027 AGERKLPTKDLEEIGLDEATMARL--KRHFDDNPRYDEYNGEQVRMLNFDAMEPDLK--- 1081
Query: 627 DNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEAL-RMFQQFTTTPTGMFLNILDLSNS 685
+ R GT + + QF L
Sbjct: 1082 -----EATAIAIRRMQGRLIQRHFVGDEGTWMNKWWGKALTQFKGFSIVSLEKQLIHDIR 1136
Query: 686 AKMPKGA---SMALNHVWIQYSATMALAGIGVASIKALL--RGEDPSLPEVIYDGTLANG 740
+ A ++ Y + M + IG A K L + + +L I++
Sbjct: 1137 GDKTQAAMIFGWSVFLAAAAYGSQMQMQSIGRADRKQFLDDKFNNQALAMGIFNKMPQVA 1196
Query: 741 ALLPYMDRLTK---------------LVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATK 785
AL D L + G + + + A+
Sbjct: 1197 ALGLLGDGLASVGAMPDAMLQAPGRTGFRSMGAGDLVAGAG-MVGDYQEVLQALSNYASG 1255
Query: 786 DNENSKVNATKAIRKTLPFMN 806
++ S IR+ +P N
Sbjct: 1256 SDDVSTRQLVDKIRRVVPLAN 1276
>gi|311875242|emb|CBX44501.1| internal virion-like protein [Erwinia phage phiEa1H]
gi|311875363|emb|CBX45104.1| putative internal virion-like protein [Erwinia phage phiEa100]
Length = 1294
Score = 46.9 bits (109), Expect = 0.017, Method: Composition-based stats.
Identities = 91/681 (13%), Positives = 193/681 (28%), Gaps = 68/681 (9%)
Query: 160 QNEQASRLVKQYFETQRELHSQAHEAGL-DYKFFENRIPQPMSVDKLRATKKDDFVRSML 218
+A+ + F+ E+ QA EAG + K ++ +P K+ +
Sbjct: 630 GVRKAAEGISDRFKKALEIRKQAGEAGFENVKSAQDYLPALFDGPKIASA---------- 679
Query: 219 DWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPS-SEVGVKREFERVFH 277
++RY + + + + +V + + + S S + + FERV
Sbjct: 680 ----VTRYGTENVEAVLANGYRTGKYKVGRKASEAIAKMQVSRALDSTLSSRLSFERVVS 735
Query: 278 FKDSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVI----ARELGPNADSFVKQMIVQT 333
+ Q +D + G+ ++ L + R +G N + V + VQ
Sbjct: 736 QSERQNFIDGLREAGIPDHIIDDLIEGQELDDVAAAVSSRAMRSMGINTQAEVGGVKVQD 795
Query: 334 IANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAG 393
+ A K+ + EVM + E TG + R+
Sbjct: 796 LLKTNIAEIAENYGKEAAAGAAMARMGFRTRN--EVMAAIDAAERTGRNMGIGAKRAGDE 853
Query: 394 ASMLGQHPI----GALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDV---GL 446
A+ML L +D + +R + I R+N+M + E+ + G+
Sbjct: 854 ANMLRDSVRLLYGNTLDDDPNAAIVKATRRLREVTTITRLNQMGFAQAPEISRALVKMGI 913
Query: 447 YAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDT 506
+ + G + ++G ++H + + + + N +
Sbjct: 914 GP-VMKSVGATKILFGRRGRVGGTAQGELHD----VEMREVEQALGYIGEDNWLHGWATR 968
Query: 507 YASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDAD 566
+ + + K L + + + G T S LK
Sbjct: 969 HDEFN--EDPDNIRKISKVLDNTLAAGSRANLVLSGFKAIQGGSEKIVTRSITMRLKQHL 1026
Query: 567 LRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVL 626
+ + + L ++ + + + +++ +L
Sbjct: 1027 AGERKLPTKDLEEIGLDEATMARL--KRHFDDNPRYDEYNGEQVRMLNFDAMEPDLK--- 1081
Query: 627 DNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEAL-RMFQQFTTTPTGMFLNILDLSNS 685
+ R GT + + QF L
Sbjct: 1082 -----EATAIAIRRMQGRLIQRHFVGDEGTWMNKWWGKALTQFKGFSIVSLEKQLIHDIR 1136
Query: 686 AKMPKGA---SMALNHVWIQYSATMALAGIGVASIKALL--RGEDPSLPEVIYDGTLANG 740
+ A ++ Y + M + IG A K L + + +L I++
Sbjct: 1137 GDKTQAAMIFGWSVFLAAAAYGSQMQMQSIGRADRKQFLDDKFNNQALAMGIFNKMPQVA 1196
Query: 741 ALLPYMDRLTK---------------LVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATK 785
AL D L + G + + + A+
Sbjct: 1197 ALGLLGDGLASVGAMPDAMLQAPGRTGFRSMGAGDLVAGAG-MVGDYQEVLQALSNYASG 1255
Query: 786 DNENSKVNATKAIRKTLPFMN 806
++ S IR+ +P N
Sbjct: 1256 SDDVSTRQLVDKIRRVVPLAN 1276
>gi|295676075|ref|YP_003604599.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002]
gi|295435918|gb|ADG15088.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002]
Length = 371
Score = 46.5 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 92/257 (35%), Gaps = 27/257 (10%)
Query: 491 SHALIVYNQIGRMTDTY-ASLKDLKADPRLDP----SIKAFFKQLDDTDFTVIKRAKAMS 545
+ V+ + + + + L DL + P SI+AF+++L ++ +I + + ++
Sbjct: 84 AFGAHVHEIVALVQRLFESGLPDLPPWVQRIPLVGSSIEAFWERLTSSNSELIAQLRTLA 143
Query: 546 SPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADL 605
+P G I A L ++ I + A
Sbjct: 144 APAGKW-------ILAAALAVTHGLGLLALSIVLAFFFYTGGEGA------------AAW 184
Query: 606 ERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMF 665
+ + + + + AL V+ V G + T+L G + G A L +
Sbjct: 185 LNAGMRRVAGERAEYLLALAGSTVKGVVYGILGTALVQGVLAGFGFWVAGVPAPALLGLV 244
Query: 666 QQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGED 725
F + G + + L + + +G S + + + + G+ IK +L G++
Sbjct: 245 TFFLSVVPGGPVVVW-LPAAIWLYQGGSTGWAIFLVVW--GLLVVGMADNVIKPILIGKN 301
Query: 726 PSLPEVIYDGTLANGAL 742
+P ++ + GA
Sbjct: 302 SDMPLILVMLGILGGAF 318
>gi|302659279|ref|XP_003021331.1| hypothetical protein TRV_04537 [Trichophyton verrucosum HKI 0517]
gi|291185226|gb|EFE40713.1| hypothetical protein TRV_04537 [Trichophyton verrucosum HKI 0517]
Length = 450
Score = 45.7 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 53/201 (26%), Gaps = 10/201 (4%)
Query: 26 EDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDR 85
ED K + Y A L+ ++ + ++ + D + DL+
Sbjct: 36 EDRCKEIGKQWKKTEEEKEKSYS-AALRKRKELAAQASKTEKEMQDRILALEKEAQDLEG 94
Query: 86 VQAGVYGKSQ---ALFNKLFFKAGSAEVPLEMK--IKAAETKVLSKFNEYAEVGSKNLGF 140
+ + + A E+ KA + + E + +
Sbjct: 95 SLVDLEAQLETARARNRGKTASGQRQGKAYELAQLAKARTDTLRTVLEEVHLQRDQVVNL 154
Query: 141 TLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPM 200
+ + L F E +E R V+ + + ++ D + P+
Sbjct: 155 LREAEGILSKFKEEYNPNFNDEGVKRAVRSWEDYVARKGEHGSDSFGDDALLDALKPEHD 214
Query: 201 SVDKLRATKKDDFVRSMLDWL 221
+ + L
Sbjct: 215 EPF----GNPEQWAEEAEPGL 231
>gi|328792916|ref|XP_001122457.2| PREDICTED: laminin subunit beta-1 [Apis mellifera]
Length = 1774
Score = 45.7 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 62/185 (33%), Gaps = 13/185 (7%)
Query: 16 ELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYK 75
+L E++ L D I SL A+ L E + + DAI++
Sbjct: 1521 QLKPDEIKELADRIKSIVGSLTDSDKILADT--KDDLYLAEQLKNRATKMKEDAIEKQVL 1578
Query: 76 RHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAE--VPLEMKIKAAETKVLSKFNEYAEV 133
+ + L+ + +A+ + S + + K A+ + S +
Sbjct: 1579 ANVVVVLLNDAKKAQTRAQEAINQAERDVSRSEKDLEEIAEVTKGAQMQANSTTQTVDSL 1638
Query: 134 GSK---------NLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHE 184
++ F L+++ ++ + + + + L +Y L S+ ++
Sbjct: 1639 DARLKQLQTQSVRNDFVLNQEISVEARKIAEEAQNVDIKTKELAMEYKNADELLDSRMNK 1698
Query: 185 AGLDY 189
+ +
Sbjct: 1699 SNGNI 1703
>gi|167600423|ref|YP_001671923.1| phage particle protein [Pseudomonas phage LUZ24]
gi|161168286|emb|CAP45451.1| phage particle protein [Pseudomonas phage LUZ24]
Length = 1055
Score = 45.3 bits (105), Expect = 0.048, Method: Composition-based stats.
Identities = 91/755 (12%), Positives = 187/755 (24%), Gaps = 131/755 (17%)
Query: 90 VYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLD 149
K+ + + + K + ++ K+
Sbjct: 374 PLAKASPIAREFSETFRADMSGKRASGKTIFEDQELQAGKWNSELDNIFEGKSSKEIDRI 433
Query: 150 VFDEMKGKKTQNEQASRLVKQYFETQRELHSQA-HEAGLDYKFFENRIPQPMSVDKLRAT 208
+ D G T +A+RL ++ ++A + G+ N +P +S +K+++
Sbjct: 434 ISDTSAGVNT--PEATRL----RALMDDVRNEAVNRGGMSVGTIPNYMPFGLSPEKVQS- 486
Query: 209 KKDDFVRSMLDWLDLSRY-----------KDIDGTPLSRSEIASFVGE-----VFAERVR 252
+F+ + + + D + E+ V + + R
Sbjct: 487 --PEFLNDITPYFQSRQAAEDAVANWLAEVSDDTRGNTAPEVNRLVTQNQQTGAWEVDPR 544
Query: 253 STSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTI-------LTSEL 305
DP + ++S+A + ++N +
Sbjct: 545 YRIQGDPDTLRGRFAQSDAVPKYGQLEESRAFGSVPQEILNKYSLNDTPKKRLQEIRDYF 604
Query: 306 ASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQ 365
S I G N + I +A Q A G+ + + M
Sbjct: 605 EGASHRIAFTERFGINGEKA-NAKIASAVAEAQRA-----------GKRVTKEEVDRMYD 652
Query: 366 MWEVM-RYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKE 424
+ + +++ A A S L L E + K
Sbjct: 653 LVDAYNGMHGRIKDPNLKKLAAVTSGALVLSRLPLAGFSTLTE---------FSLPFAKA 703
Query: 425 AIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYL 484
+ L E++ R + G + G + + A
Sbjct: 704 GVMPTLGAVLPTMGEVVRQA----------ARRIYSGVPKSETGRFMSD--MNHTLASAT 751
Query: 485 DKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAM 544
A + + I + + L ++ + + M
Sbjct: 752 SLMADRVGAEVFNSTIQKAIRGQFLINGLSILTHVNRIFAT-------ETAKRVYQNNLM 804
Query: 545 SSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLAD 604
G ++ +K + L M I + LK +P
Sbjct: 805 DLAAGLPFSSANGALK------VAQLREMGVNIGSQQDALKLISPATPS----------- 847
Query: 605 LERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRM 664
E+ + + + M V + F + + + ++M
Sbjct: 848 ----EVLMANNVKTLAMRRF--------VDQVVLDPTFADKPMWMSNGN--------VQM 887
Query: 665 FQQFTTTPTG-------MFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASI 717
F P MF L + A + M G +
Sbjct: 888 FSLLKGYPAAYGNIILPMFRRRLSPHFAGSWTNAGMGAAGIAF--TLGLMMSLGYLQDEL 945
Query: 718 KALLR-----GEDPSLPEVIYDGTLANG---ALLPYMDRLTKLVSKGDRAAIGGLLGPVP 769
+ L + ED PE + D LT + +LGPV
Sbjct: 946 RQLAKFGGSSREDTRSPEQRMMDAVMQQMPLQASMIYDMLTGY--RRGTTPAEVVLGPVA 1003
Query: 770 SMVTNLTSS-AVELATKDNENSKVNATKAIRKTLP 803
T + +A+ ++ S K + K P
Sbjct: 1004 GAATEGAMAVGKTIASFGDDPSAGEIWKFLYKQTP 1038
>gi|94309527|ref|YP_582737.1| hypothetical protein Rmet_0582 [Cupriavidus metallidurans CH34]
gi|93353379|gb|ABF07468.1| conserved hypothetical protein; putative membrane protein
[Cupriavidus metallidurans CH34]
Length = 367
Score = 43.4 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 13/144 (9%)
Query: 604 DLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALR 663
D R + + ++ + +L V+ V G + T+ G+ + G L
Sbjct: 183 DWVRGGMRRVSGDRADHLLSLAGSTVKGVVYGVLGTAFVQAVLAGIGFWIAGVPGAAILG 242
Query: 664 MFQQFTTT-----PTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIK 718
F + P L L ++ + M + A+ G+ IK
Sbjct: 243 FITFFLSVVPMGPPLAWIPAALWLYHTGETGWAIFMVVW--------GAAVVGMADNVIK 294
Query: 719 ALLRGEDPSLPEVIYDGTLANGAL 742
LL + LP + + GAL
Sbjct: 295 PLLISKGTGLPLIWIMMGVLGGAL 318
>gi|31711679|ref|NP_853597.1| internal virion protein [Enterobacteria phage SP6]
gi|31505683|gb|AAP48776.1| gp37 [Enterobacteria phage SP6]
gi|40787054|gb|AAR90028.1| 36 [Enterobacteria phage SP6]
Length = 1270
Score = 43.0 bits (99), Expect = 0.25, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 80/296 (27%), Gaps = 27/296 (9%)
Query: 536 TVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQR 595
+ I + I+ + + K ++ + L
Sbjct: 960 SAIIDNGLAMGSRINTWLSGFKAIQGGSEKIVARSINKRLKQHLMGERELPKRDLEEVGL 1019
Query: 596 QELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLL---TY 652
E + E + D K+ + D ++ +R + ++ +
Sbjct: 1020 DEATMKRLKRHFDENPMYADYNGEKVRMMNFDAMEPDLREIVGVAVRRMSGRLIQRNFIG 1079
Query: 653 KRGTRAGEAL-RMFQQFTTTPTGMFLNIL---DLSNSAKMPKGASMALNHVWIQYSATMA 708
G + + QF + L + + + + + + Y+ M
Sbjct: 1080 DEGIWMNKWWGKALTQFKSFSIVSIEKQLIHDLRGDKIQAAQIMAWSSLLGFASYATQMQ 1139
Query: 709 LAGIGVASIKALLRGE--DPSLPEVIYDGTLANGALLPYMDRL----------------T 750
+ IG LR + ++ +++ D
Sbjct: 1140 MQAIGREDRDKFLREKFDTQNIAMGVFNKLPQVAGFGLAGDTFATFGLMPDSMMQAPGRM 1199
Query: 751 KLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMN 806
+G + G V S NL+ + V+ A D++ S +R+ +P N
Sbjct: 1200 GFRQQGFGDLVAGAG--VISDAVNLSQALVKYANGDDDVSTRQLVDKVRRLVPLAN 1253
>gi|73542361|ref|YP_296881.1| hypothetical protein Reut_A2676 [Ralstonia eutropha JMP134]
gi|72119774|gb|AAZ62037.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134]
Length = 388
Score = 42.7 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 13/141 (9%)
Query: 607 RKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQ 666
R + + + ++ + AL V+ V G + T+ G+ + G A L
Sbjct: 186 RAGMRRIAGERADHLLALAGSTVKGVVYGVLGTAFIQAVLQGIGLWIAGVPAAAILGFVT 245
Query: 667 QFTTT-----PTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALL 721
F + P L L + + + + +A+ G+ +K LL
Sbjct: 246 FFLSVIPVGPPLVWLPAALWLYHGGETGWAIFLVVW--------GVAVVGMADNVVKPLL 297
Query: 722 RGEDPSLPEVIYDGTLANGAL 742
+ +P + + GAL
Sbjct: 298 ISKGTGMPLIWIMMGVLGGAL 318
>gi|312888776|ref|ZP_07748340.1| band 7 protein [Mucilaginibacter paludis DSM 18603]
gi|311298776|gb|EFQ75881.1| band 7 protein [Mucilaginibacter paludis DSM 18603]
Length = 647
Score = 42.7 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 65/178 (36%), Gaps = 28/178 (15%)
Query: 11 KAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAI 70
+A + L+ +++ + E+ +++ +R + A + QKE++++
Sbjct: 429 EALMKTLTDRKIAQEEEKTYETQR------MAQVQRQGVEKETAIAEIQKEIVKAQQSV- 481
Query: 71 DEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEY 130
+ + + + + G++ +L ++ +A + ++ E + A + ++
Sbjct: 482 --EIAQRTADAAVKKSE----GEATSLKLQVNAEAAATKMRAEAEADATRLRAGAQ---- 531
Query: 131 AEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLD 188
S L + + + KT +A +++ T Q G D
Sbjct: 532 --AESTRLNASAEAEKI---------SKTGLAEAEKIMAIGKSTAEAYELQVKAMGGD 578
>gi|313674771|ref|YP_004052767.1| tex-like protein [Marivirga tractuosa DSM 4126]
gi|312941469|gb|ADR20659.1| Tex-like protein [Marivirga tractuosa DSM 4126]
Length = 748
Score = 42.7 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 40/318 (12%), Positives = 108/318 (33%), Gaps = 19/318 (5%)
Query: 145 QFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDK 204
D +++ + E + +K+ + EL + + A K + +P
Sbjct: 51 ADVRDRVQQLRDLDKRREAILKSIKEQEKLTPELEKEINAAETMAKLEDIYLPYKPKRRT 110
Query: 205 LRATKKDDFVRSMLDW----------LDLSRYKDIDGTPLSRSEIASFVGEVFAERVRST 254
++ + + L+ +Y D + ++ AE
Sbjct: 111 KATIAREKGLEPLAKLIFEQANIDLELEAGKYIDEEKAVADIESALHGARDIIAEWANEN 170
Query: 255 SFKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELASLSK---D 311
+ I + + +V K+++ Y ++F NV T + + ++ + +
Sbjct: 171 AELREDIRELFLENGKFRSKVLSGKETEG-QKYKDYFEWEENVKTAPSHRILAMRRGEKE 229
Query: 312 IVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMR 371
+++ ++ P + + M + D EA+ K+ + L+ E ++++
Sbjct: 230 MILMLDISPEEEDALFIMEKHFVKADNEAAQQVKIALSDAYKRLLKPSMETEIRIF---- 285
Query: 372 YGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINK 431
+ + + LR A+ +GQ + A+ + GF + L + + +
Sbjct: 286 TKKKADEEAIKVFSDNLRQLLLAAPMGQKNVMAV-DPGFRTGCKLVCLDRQGKLLFNEAI 344
Query: 432 MPLKERMELLSDVGLYAE 449
P + + + L +
Sbjct: 345 YPHEPQRQTAKAAALILQ 362
>gi|254480803|ref|ZP_05094049.1| peptidase, M48 family [marine gamma proteobacterium HTCC2148]
gi|214038598|gb|EEB79259.1| peptidase, M48 family [marine gamma proteobacterium HTCC2148]
Length = 644
Score = 42.7 bits (98), Expect = 0.30, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 59/216 (27%), Gaps = 40/216 (18%)
Query: 678 NILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLRGEDPSLPEVIYDGTL 737
++ + +P A +A+ I + L G+ +L G + I +
Sbjct: 143 RGINAFAAGIVPADAVVAVTRGTIDHLKRHELQGVIAHEFSHILNG---DMRLNIRLAAM 199
Query: 738 ANGALLP--YMDRLTKLVSK--GDRAAIGGLLGPVPSMVTNLTSSAVELATK-------- 785
G L + ++ R+ P+ + + LA
Sbjct: 200 LKGITFIGDVGHILLRSNNRVRTGRSGKNDAALPMLGLALWILGWLGGLAAGFIKAAISR 259
Query: 786 --------------DNENSKVNATKAIRKTLPFMNMWYLKNS-FDHLILNQIL----EEL 826
+ +A K I +P + + + H+ QI +
Sbjct: 260 QKEYLADAGAVQFTRDSGGIADALKVIGGYIPGSLVHAARAAEMSHIFFGQIEHHLWQLF 319
Query: 827 N--PGYLDRQQSKKKKKGIELFQNMDEGLPHRLPFP 860
+ P +R + + + Q P P P
Sbjct: 320 STHPSLQERIRRLDARWDGQYIQR----QPKHYPNP 351
>gi|291231741|ref|XP_002735825.1| PREDICTED: vinculin-like [Saccoglossus kowalevskii]
Length = 1356
Score = 42.7 bits (98), Expect = 0.31, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 13/215 (6%)
Query: 15 RELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAY 74
+ L+ + + I G+G+ +++ R + E+IR + +
Sbjct: 198 KNLTPVLISGI--KIFVTTKQTGGRGVGESQENRNYVVTKMSQEIHEIIRVLQLTTYDEE 255
Query: 75 KRHQLR-SDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEV 133
+ + + QA ++GK + L E I+ +
Sbjct: 256 GWDVDDITVMKKAQAAIFGKGDLAKDWLSNPHAEPGGLGERSIRQIVDEARK--VGARCE 313
Query: 134 GSKN---LGFTLDKQFGLDVFDEMKGKKTQN-EQASRLVKQYFETQRELHSQAHEAGLDY 189
G + L D D E++ + N QA +L + + L + + A Y
Sbjct: 314 GPEKDEILRLCDDITVMTDQLAELRARGEGNTPQAQQLARAIQDRVDYLTGRVNSAVAHY 373
Query: 190 KFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLS 224
R P P K+ ++ ++ S +D
Sbjct: 374 AQSGIRKPAPTVSGKVEQAQQ--WLAS--PGVDDR 404
>gi|47208973|emb|CAF99051.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1202
Score = 41.9 bits (96), Expect = 0.52, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 40/153 (26%), Gaps = 25/153 (16%)
Query: 166 RLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLD--- 222
+ F + L A G + P + + T + + M ++
Sbjct: 119 EGKRIIFTGAKMLRKDAFSGGWE-GVTPGFQPYQHGLQSISVTTEKTWASGMTSTMEGDA 177
Query: 223 LSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFK--- 279
Y+ + +S K PS S + + K
Sbjct: 178 RRTYQIPEDHGEDD-----------------SSEKTPSKASKSPQKSTKRPKTIPVKVSL 220
Query: 280 -DSQAHMDYMEHFGVSTNVNTILTSELASLSKD 311
D + +E F + ++ L L +D
Sbjct: 221 LDGSDYEAAVEKFAKGQTLLDMVCGHLNLLERD 253
>gi|319950560|ref|ZP_08024469.1| hypothetical protein ES5_13288 [Dietzia cinnamea P4]
gi|319435754|gb|EFV90965.1| hypothetical protein ES5_13288 [Dietzia cinnamea P4]
Length = 498
Score = 41.5 bits (95), Expect = 0.71, Method: Composition-based stats.
Identities = 58/361 (16%), Positives = 117/361 (32%), Gaps = 42/361 (11%)
Query: 92 GKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVF 151
+ + L +L A + ++ ++ A + A V + +L +Q G V
Sbjct: 128 SRVETLTRQLEDLARDTDPSVQGRLAALHRERDRIDAAIARVEAGDLELADPEQVGEKVS 187
Query: 152 DEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKD 211
+ ++G +R+ ++ ++L + + + + + + +
Sbjct: 188 EILRGADDIPADFARVRAEFESLNQDLRRRLLDQDGARGDVLDAVFGGVDLIGDSEAGR- 246
Query: 212 DFVRSMLDWLDLSRYKDID---GTPLSRSEI-------ASFVGEVFAERVRSTSFKDPSI 261
F LD R +D LSR ++ + E+F E + + +
Sbjct: 247 SFSSFYSVLLDPERSASVDTWIDDILSRPQVADLPPSARRGLRELFDEMETAGAEVN--- 303
Query: 262 PSSEVGVKREFERVF-HFKDSQAHMDYMEHFG-----VSTNVNTILTSELASLSKDIVIA 315
GV R HF S A++++ + + + S+ V
Sbjct: 304 -----GVLTSLSRSLRHFVTSDAYVEHRQMLALIRSARAAAAEASGARAVKPTSQMSVPL 358
Query: 316 RELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGET 375
R +G V+ + + N E +V G LE +
Sbjct: 359 RRVG----MSVRSVSALRLRNPGEERVAAEVAHHEEGHADLEA-----------LTALVR 403
Query: 376 VENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKEAIQRINKMPLK 435
A A +R S LG IGA+L + ++ + S VG+ AI + P
Sbjct: 404 ASEIDEAELRAHVRD--VVSRLGPSSIGAILREHPATQGVASIVGLLNLAITTQAEAPPD 461
Query: 436 E 436
+
Sbjct: 462 D 462
>gi|313904571|ref|ZP_07837946.1| Sigma 54 interacting domain protein [Eubacterium cellulosolvens 6]
gi|313470541|gb|EFR65868.1| Sigma 54 interacting domain protein [Eubacterium cellulosolvens 6]
Length = 732
Score = 41.1 bits (94), Expect = 0.76, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 73/260 (28%), Gaps = 37/260 (14%)
Query: 142 LDKQFGLDV-------FDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFEN 194
DK + DEMK + + N +A+ E + E
Sbjct: 307 EDKDTLRQIRDAVTVRLDEMKSEASGNGEAAASGDTVRAKSGEEKPEKDGEMAVVGQEEP 366
Query: 195 RIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKD------IDGTPLSRSEIASFVGEVFA 248
P+ + + ++ L LD + K DG+ I E
Sbjct: 367 SRPEI--SLIVPVYNMEKWLSDFLTGLDAQKCKSLEVIFVDDGSTDGSGGILEEYQEGCK 424
Query: 249 ERV-----RSTSFKDPSIPSSEVGVKREFERVFHFKDSQAHMDY---MEHFGV-STNVNT 299
R T + G+ R F D M+ E +GV
Sbjct: 425 SRKGWSVRILTQENQGVSAAKNAGLDAAKGRWLAFADPDDWMEADYLQEMYGVAMREDVD 484
Query: 300 ILTSELASLSKD-------IVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLKDWLG 352
++ ++ D + ++ P+ +S + A +Q+ + K
Sbjct: 485 VVICHERAVDADEHPSPEALGAISKMRPSPES------AEVDAEEQQRADAPKDDSVPGE 538
Query: 353 RNKLEVRQEAMLQMWEVMRY 372
++E R+E + +
Sbjct: 539 PLRIEERKELLRHFQDDFAG 558
>gi|332142305|ref|YP_004428043.1| hypothetical protein MADE_1014555 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552327|gb|AEA99045.1| hypothetical protein MADE_1014555 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 2149
Score = 41.1 bits (94), Expect = 0.78, Method: Composition-based stats.
Identities = 77/637 (12%), Positives = 180/637 (28%), Gaps = 81/637 (12%)
Query: 170 QYFETQREL-HSQAHEAGLDYKFFENRIPQPMSVDKLRA--TKKDDFVRSMLDWLDLSRY 226
++ E ++ A G ++ +P+ + + +R+ + D+S
Sbjct: 1531 EFKEIMDDMWKYAAERMGGKLGKIDDYMPRIYDPEAIINDIEGFKAVLRNAMP--DISNA 1588
Query: 227 KDIDGTPLSRSEIASFVGEVFAE-RVRSTSFKDPSIPSSEVGVKREFERVFH------FK 279
K + +E + E+F + +R+ + S + + ER FK
Sbjct: 1589 KMEEIIRTIIAEEGAISEELFEDSGLRAPGNDNVSTRMLKDIPESALERFMATPSHRLFK 1648
Query: 280 ---DSQAHMDYMEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAN 336
+ + +Y G V L + L ++ + N ++++
Sbjct: 1649 YIHKTTSRAEYETRAGAYNTVED-LENRLKRQAQTQYV------NPK-TLERVSEIAKNF 1700
Query: 337 DQEASAGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASM 396
+E N+++ + + + + Y ++ W R
Sbjct: 1701 REEVQNHNEMIASLEEQLLTHPDLSFKAALQDQIDYLKSNPPKPPEYWNPNGRIDEAIEK 1760
Query: 397 LGQHPIGAL--LEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYA-EGVVA 453
L + + +G++ R +S ++ Q + M + + + V
Sbjct: 1761 LPEDRQKEARHIIEGYMGRLGISISPESRKLQQWMMAM------QYYTTLAFATISSVTD 1814
Query: 454 HGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDL 513
M G SK+ D + ++ IG +
Sbjct: 1815 IANIMARGKVDSFGSMVKQSKVL-------FDAFKNRDDLELIARTIGVIQH-------- 1859
Query: 514 KADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARM 573
SI TD TV K G + + I +
Sbjct: 1860 ----DTVTSIINQQYGGTFTDPTVQKWNDRFFRAIGLEWFTKTTRIMAMS--AGFHFIEE 1913
Query: 574 SDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSV 633
S H + N L+ + + Q++ + + DK ++ V
Sbjct: 1914 SANNQRHGARFLNELGLTRDDVKYWQRKGSPKVSDGKDPGIDK--------IVAAVNQFA 1965
Query: 634 RGAMHTSLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNIL-DLSNSAKMPKGA 692
++ ++ G+ G ++ Q + ++ ++ K +
Sbjct: 1966 DESILRPNAAQRPTW------GSDLGFFHQLVWQLKSFYWAFGTTVIKGMAREIKARQRR 2019
Query: 693 SMALN-HVWIQYSATMALAGIGVA--SIKALLRGEDPSLPEVIYDGTL-------ANGAL 742
++ + A + L G+ +K ++ + P G L
Sbjct: 2020 GDSIPKSLTPLLFAGVPLMGLAAIGLELKEFIKYGNFEGPSAKMGAAAYTFELFDRAGGL 2079
Query: 743 LPYMDRLTKLVS--KGDRAAIGGLLGPVPSMVTNLTS 777
P L + + K + + LLGP + +
Sbjct: 2080 GPA-SLLVGMYNAPKYGDSPLASLLGPTAEHIDSFFG 2115
>gi|315578927|gb|EFU91118.1| phage tail tape measure protein, TP901 family, core region
[Enterococcus faecalis TX0630]
Length = 767
Score = 41.1 bits (94), Expect = 0.88, Method: Composition-based stats.
Identities = 72/506 (14%), Positives = 153/506 (30%), Gaps = 46/506 (9%)
Query: 365 QMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQMLSRVGIDKE 424
Q+++ + G + G I + G++++ + +K
Sbjct: 291 QLFDAVNRGAPQLKAMGLGFSESTTLIGQMEKAG---IDSAGTLGYLAKASVVYAKDNKT 347
Query: 425 AIQRINKM--------PLKERMELLSDV--GLYAEGVVAHGRNMMEGSDAFQIGHKLHSK 474
++ +E++ + S+V A +V + D K +
Sbjct: 348 MQDGLSGTIESIKGATTEQEKLTIASEVFGTKAASKMVEAIDSGALSMDGLADSAKNAAG 407
Query: 475 MHKWSG---AEYLDKKRISSH-ALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQL 530
+ + +D+ +I+ + I ++G A L +A + +F L
Sbjct: 408 TVDQTFNDILDPIDQAKIAQNQFKIAMGELGEQV-QIALLPAFEAASNAIQKVSTWFSGL 466
Query: 531 DDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTL 590
D I + + G + + ++ + + + ++ I L
Sbjct: 467 TDNQKQTIITIAGVVAAIGPVLVVLGTLASSIS-SLIPVITFIASPIGIVIAALAAFVAG 525
Query: 591 SPEQRQELQQQLADLERKEINILKDKVS--NKMHALVLDNVQTSVRGAMHTSLFDRQRLG 648
++ D N++KD V K+ A + + G + ++ ++
Sbjct: 526 IVIAYNKVGW-FRDFINASFNVIKDIVVGVFKVLADTTKSTFDFITGFIGGAMDGAAKII 584
Query: 649 LLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMA 708
G R+F TG+F D S + + + + A
Sbjct: 585 ------GDYVNAIKRIFGGIVDFVTGVFT--GDWSRAWQGVVDIFGGIFEGIAAVAK--A 634
Query: 709 LAGIGVASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPV 768
+ I L G + G G + + L + + AI G GP
Sbjct: 635 PINAMITLINGFLGGLNNIKIPKWVPGVGGKGFSIAQIPYLAEGGHMINGQAIVGEAGPE 694
Query: 769 PSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFDHLILNQILEELNP 828
N ++ L+ ++ A K K H+ Q+ + NP
Sbjct: 695 LLTAKNGKTTVTPLSQEEKARGIGGALKGG------------KTIEQHVYFGQV-DANNP 741
Query: 829 GYLDRQQSKKKKKGIELFQNMDEGLP 854
LDR K K + F ++ G+P
Sbjct: 742 SELDRMNRKLYKASAQAFYDLG-GVP 766
>gi|332530570|ref|ZP_08406507.1| 2-isopropylmalate synthase [Hylemonella gracilis ATCC 19624]
gi|332039976|gb|EGI76365.1| 2-isopropylmalate synthase [Hylemonella gracilis ATCC 19624]
Length = 565
Score = 41.1 bits (94), Expect = 0.93, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 22/171 (12%)
Query: 4 ECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELI 63
+ +Q + A+G+ELS +++ ++ + ++ E AG++ ++
Sbjct: 410 QVVQAVMDASGKELSARDIHQVFLREYGLNEVSAPRYRAQEEGENAAGVRTTTLQADVVL 469
Query: 64 RSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKV 123
AI + G +A L AG + L+ A +
Sbjct: 470 EGKALAI----------------EGAGNGPIEAFVEGLATAAGESIRVLDYHEHAVGSGA 513
Query: 124 LSKFNEYAE--VGSKN-LGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQY 171
++ Y E VG + G +D + + +A R +Q
Sbjct: 514 NAQAVAYLELRVGERTLFGVGMDANIVSASLKAIV---SGLLRARRGAEQV 561
>gi|134287713|ref|YP_001109879.1| transposase Tn3 family protein [Burkholderia vietnamiensis G4]
gi|134132363|gb|ABO60098.1| transposase Tn3 family protein [Burkholderia vietnamiensis G4]
Length = 989
Score = 40.7 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 53/332 (15%), Positives = 94/332 (28%), Gaps = 50/332 (15%)
Query: 12 AAGRELSKKELRRLEDGIVRAYVS----LDGKGLSKAERYRLAGLKAEEDFQKELIRSVN 67
A L+ RRL+D + R L S + L+ E + +
Sbjct: 180 ALAEPLTDVHRRRLDDLLKRRDNGKTTWLAWLRQSPVKPNSRHMLEHIERLKAWQALDLP 239
Query: 68 DAIDEAYKRHQLRSDLDRVQAGVYGK-----SQALFNKLFFKAGSAEVPLEMKIKAAETK 122
I+ +++L Q + L A + +I +
Sbjct: 240 SGIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALAIEGMATVTDEIIDLHDR 299
Query: 123 VLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKG----------KKTQNEQAS------- 165
+L K A+ + K V M G + + A+
Sbjct: 300 ILGKLFNAAKNKHQQQFQASGKAINDKV--RMYGRIGQALLEAKQSGGDPFAAIEAVMPW 357
Query: 166 -RLVKQYFETQRELHSQ----AHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDW 220
E Q+ + H G +Y PQ + V KLRA +LD
Sbjct: 358 DTFAASVTEAQKLAQPESFDFLHRIGENYTTLRRYAPQFLDVLKLRAAPAAK---GVLDA 414
Query: 221 LDLSRYKDIDGTPLSRSEI-ASFVGEVFAERVRSTSFKDP-----------SIPSSEVGV 268
+D+ R + D ++ +F+ +A+ V + D V
Sbjct: 415 IDVLRDMNNDNARKVPADAPTAFIKPRWAKLVLTDDGIDRRYYELCALSELKNALRSGDV 474
Query: 269 KREFERVFHFKDSQAHMDYMEHFGVSTNVNTI 300
+ R FKD ++ E F + +
Sbjct: 475 WVQGSRQ--FKDFDEYLVPAEKFATLKLASEL 504
>gi|269115086|ref|YP_003302849.1| Lmp related protein [Mycoplasma hominis]
gi|268322711|emb|CAX37446.1| Lmp related protein [Mycoplasma hominis ATCC 23114]
Length = 1366
Score = 40.7 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 10/165 (6%)
Query: 52 LKAEEDFQKELIRSVNDAIDE-AYKRHQLRSDLDRVQAGVYGKSQA--LFNKLFFKAGSA 108
KA +D QK + + A + K+ QL + +A K Q +FN
Sbjct: 172 KKATQDLQKLIDAAKEKAKQDFNSKKQQLDDLIKSNEAKDVDKQQETGIFNNTNLSGNDL 231
Query: 109 EVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLD-KQFGLDVFDEMKGKKTQNEQASRL 167
+E K K E + S + + L D K+ D+ D G+K +A++
Sbjct: 232 IKDIESKTKTIEDAIKSLTKKINDKKDSLLNDFNDAKKKLQDLIDSQDGQKVDTSKANQS 291
Query: 168 VKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDD 212
++ Q +A + K + KL K+
Sbjct: 292 LQNNNVDASSTTDQIVDATTEIKKA------TQDLQKLIDAAKEK 330
Score = 39.6 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 10/164 (6%)
Query: 52 LKAEEDFQKELIRSVNDAIDE-AYKRHQLRSDLDRVQAGVYGKSQA--LFNKLFFKAGSA 108
KA +D QK + + A + K+ QL + +A K Q +FN
Sbjct: 314 KKATQDLQKLIDAAKEKAKQDFNSKKQQLDDLIKSNEAKDVDKQQETGIFNNTNLSGNDL 373
Query: 109 EVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLD-KQFGLDVFDEMKGKKTQNEQASRL 167
+E K K E + S + + L D K+ D+ D G+K +A++
Sbjct: 374 IKDIESKTKTIEDAIKSLTKKINDKKDNLLKDFNDAKKQLEDLIDSQDGQKVDTSKANQS 433
Query: 168 VKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKD 211
++ Q A + K + KL K+
Sbjct: 434 LQNNNADASSTTDQIVNATNEIKKA------TQDLQKLIDAAKE 471
>gi|187476939|ref|YP_784963.1| hypothetical protein BAV0432 [Bordetella avium 197N]
gi|115421525|emb|CAJ48034.1| phage-related protein [Bordetella avium 197N]
Length = 1129
Score = 40.7 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 66/508 (12%), Positives = 149/508 (29%), Gaps = 52/508 (10%)
Query: 312 IVIARELGPNADSF----VKQMIVQTIANDQEASAGNKVLKDWLGRNKLEVRQEAMLQMW 367
+A+ N ++M+ A E A L ++ M +
Sbjct: 419 TEVAKIAADNPSEANLFAFRKMLATHYAIQNEVIAARTETARALASWRIPAGS-GMERFA 477
Query: 368 EVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQ-MLSRVGIDKEAI 426
++ + + + MA + L Q + L+ SR + +
Sbjct: 478 QIENALRSSGDLDLSREMAT-----RIAALSQAGMHRELDQIVRGSVWARSRDAFLEAWV 532
Query: 427 QRINKMPLKERMELLSDVGLYAEGV-----VAHGRNMMEGSDAFQIGHKLHSKMHKWSGA 481
+ P + ++S+ + + + A ++ Q+G SG
Sbjct: 533 NGLLSSPPTHLVNMMSNTSVIFQQMYERAAAAQISRILGVDGGVQLGEATAQLFGMLSGF 592
Query: 482 EYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRA 541
+ D R S+ + + M ++D + + + K +
Sbjct: 593 K--DALRYSAKSFLTNETGYGM-------------GKIDLPRA---RAISAEAWGQAKDS 634
Query: 542 KAMSSPDGYLYART-PSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQ 600
S D T P +D + L + A ++ + + ++++
Sbjct: 635 PLGRSLDVLGAVVTMPGRALGAEDEFFKTLGYRMELNALAVRRATHEVNSGIIRSDQVKE 694
Query: 601 QLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRAGE 660
++A + L+ + ++ + + A+ + G L
Sbjct: 695 RVAAIVSDPPTDLRLEAIDQATYQTFTSAPGELTKAITRGVNSVPLAGRLILPFVRTPAN 754
Query: 661 ALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKAL 720
L+ F TP + + A + G + + + ++ +A ++ +
Sbjct: 755 ILKY--SFERTPLAPLMAHVR----ADIAAGGARRDIALARITTGSLLMATAADMAMSGV 808
Query: 721 LRGEDPSLPEVIYDGTLANGALLPY----MDRLTKLVSKGDRAAIGGLLGPVPSMVTNLT 776
L G PS + PY DR ++ IG LG MV L
Sbjct: 809 LTGRGPSDRR--ERQAMERSGWQPYSIKVGDRYFA-YNR--LDPIGTSLGLSADMVEILA 863
Query: 777 SSAVELATKDN--ENSKVNATKAIRKTL 802
+ + A D E ++ +I +
Sbjct: 864 NMDDDEALGDAEVERTQAAIVMSIANNV 891
>gi|4262427|gb|AAD14632.1| putative transmembrane protein MttP [Methanosarcina barkeri]
Length = 353
Score = 40.7 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 19/187 (10%)
Query: 615 DKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRA--GEALRMFQQFTTTP 672
D++S+ + D + V + T+ + L G GE +R ++F P
Sbjct: 51 DEMSSAIAKTSGDGISLVVTAVLITAFNALAVMLALMVWNGVLGKYGELVRTLKEFH--P 108
Query: 673 TGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLR----GEDPSL 728
+ + + G+ +A+ + ++A +AG+ + ++L GE S
Sbjct: 109 CSKWFFLASIFGGPMAILGSFIAMGFIGGSFAA---VAGLLYPVVGSILAYYWYGEKISK 165
Query: 729 PEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNE 788
I + G + Y L +S G+ P + L ++A
Sbjct: 166 RAAIGIAVIVLGGISIYGGGLFTELSSGNV--------PWIGYLGGLMAAAGWGIEGAIA 217
Query: 789 NSKVNAT 795
++
Sbjct: 218 GKGLDIA 224
>gi|307313333|ref|ZP_07592956.1| conserved hypothetical protein [Escherichia coli W]
gi|306906755|gb|EFN37265.1| conserved hypothetical protein [Escherichia coli W]
gi|315063816|gb|ADT78142.1| conserved hypothetical protein [Escherichia coli W]
gi|323380955|gb|ADX53222.1| hypothetical protein EKO11_4671 [Escherichia coli KO11]
Length = 258
Score = 40.3 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A S+ + A+R R A + R
Sbjct: 107 AGEWLTEDEIRAVLDAVRDAVRSVSCRVAEDAQRIRAALTTTGQTLLTRQTRR----FRL 162
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKA---AETKVLSKFNE 129
K LD + A+ N+ G+ +EM + + +
Sbjct: 163 VVKESDHPCWLDEDDENLPVVLDAILNR-----GARFSAVEMYLVSECVEHILSSGLACD 217
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 218 VLRIPDEPPRRWFDRGVLREVVREARAE 245
>gi|73853259|ref|YP_308755.1| hypothetical protein LH0091 [Escherichia coli]
gi|73476843|gb|AAZ76458.1| hypothetical protein LH0091 [Escherichia coli]
Length = 256
Score = 40.3 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A S+ + A R R A + R
Sbjct: 105 AGEWLTEDEIRAVLDAVRDAVRSVSCRVAEDARRIRAALTTTGQTLLTRQTRR----FRL 160
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIK---AAETKVLSKFNE 129
K LD + A+ N+ G+ +EM + +
Sbjct: 161 VVKESDHPCWLDEDDENLPVVLDAILNR-----GARFSSVEMYLVCECVEHILASGLVCD 215
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 216 VLRIPDEPSRRWFDRDILREVVLEARDE 243
>gi|323158249|gb|EFZ44335.1| ychA ta [Escherichia coli E128010]
Length = 256
Score = 40.3 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A S+ + A R R A + R
Sbjct: 105 AGEWLTEDEIRAVLDAVHDAVRSVSCRVAEDARRIRAALTTTGQTLLTRQTRR----FRL 160
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKA---AETKVLSKFNE 129
K LD + A+ N+ G+ +EM + + +
Sbjct: 161 VVKESDHPCWLDEDDENLPVVLDAILNR-----GARFSSVEMYLVSECVEHILSSGLACD 215
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 216 VLRIPDEPSRRWFDRDILREVVMEARNE 243
>gi|113475196|ref|YP_721257.1| chromosome segregation ATPase-like protein [Trichodesmium
erythraeum IMS101]
gi|110166244|gb|ABG50784.1| Chromosome segregation ATPase-like protein [Trichodesmium
erythraeum IMS101]
Length = 1209
Score = 40.3 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 79/629 (12%), Positives = 200/629 (31%), Gaps = 52/629 (8%)
Query: 1 MKPECIQVLNKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQK 60
M E KA L +++ R + D LS + L E ++
Sbjct: 240 MYQELEARSWKAEDETLDFSWQEKIKSSPYRNWAFQDWMNLSSLGKQNKILLVELEKYKN 299
Query: 61 ELIRS-------VNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFN--KLFFKAGSAEVP 111
+ +S + I + + + LD +A + Q L N K++ K+
Sbjct: 300 QDEKSQLELTEVKSQLIQIQDELEKYITQLDGTEAKLSESQQQLHNKEKVYEKSQLELTE 359
Query: 112 LEMKIKAAETK---VLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLV 168
++ ++ + +S+ N S++ +K+ +K+Q + + +
Sbjct: 360 VKSQLTKTQDDLEKYVSQLNGTEAKLSESQQQLHNKEKVY--------EKSQ-LELTEVK 410
Query: 169 KQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDF--VRSMLDWLDLSRY 226
Q +TQ +L + Q + +K+ +D+F V+ + D ++
Sbjct: 411 SQLTKTQDDLEKYVSQLNGTEAKLSESQQQLHNKEKVLEKTQDEFQKVQQIQTKFDQTKN 470
Query: 227 KDIDGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEVGVKREFERVFHFKDSQA-HM 285
+ + + + + + K E ++Q +
Sbjct: 471 ELATAKSQLNETKTELIQCQSELKEKEGELQK-----YQGTQKELLETQSKLDETQGELV 525
Query: 286 DYMEHFGVSTNVNTILTSELASLSKDIVIAR---ELGPNADSFVKQMIVQTIANDQEASA 342
Y + N+ + + ++ +L N + K +
Sbjct: 526 QYQSQ--LHQNLEELEKNICKLQEAELAWKELKFQLETNEELLDKFKFQDKQNQAELGQT 583
Query: 343 GNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPI 402
+ + + + + + + WE + + + L+ A A +
Sbjct: 584 KHSLYETKIKLKTSQNQLHKTQEFWESSQSQLVAKEVVLKKYQQDLQDAEKALEDTYSQL 643
Query: 403 GALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGS 462
+ ++RQ LS + I + +E E E ++
Sbjct: 644 QRTQIELGVTRQNLSESK-GELFIYKYQLHQSQEEWEKYQSQLAGTEVLLEE-------- 694
Query: 463 DAFQIGHKLHSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPS 522
HS++ + + + + +++ I+ + +T++ + L+ +K + S
Sbjct: 695 --------YHSQLKQATEQKQQTQSKLTETEAILQAKEAELTESNSELEKIKLELERSGS 746
Query: 523 IKAFFKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRK 582
Q + + + +K+A+ T I K+A+L + +KI +
Sbjct: 747 DLQKTHQEVEKNQSQLKQAEEQKQQTQSKLTET-EAILQAKEAELTESNSELEKIKLELE 805
Query: 583 KLKNSKTLSPEQRQELQQQLADLERKEIN 611
+ + + ++ Q++Q QL +
Sbjct: 806 RSGSDLQKTHQELQQIQSQLNQTQADLTE 834
>gi|58000337|ref|YP_190172.1| YchA [Escherichia coli]
gi|57903237|gb|AAW58867.1| YchA [Escherichia coli]
Length = 258
Score = 40.0 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A S+ + A+R R A + R
Sbjct: 107 AGEWLTEDEIRAVLDVVRDAVRSVSCRVAEDAQRIRAALTTTGQTLLTRQTRR----FRL 162
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKA---AETKVLSKFNE 129
K LD + A+ N+ G+ +EM + + +
Sbjct: 163 VVKESDHPCWLDEDDENLPVVLDAILNR-----GARFSAVEMYLVSECVEHILSSGLACD 217
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 218 VLRIPDEPPRRWFDRGVLREVVREARAE 245
>gi|288957672|ref|YP_003448013.1| hypothetical protein AZL_008310 [Azospirillum sp. B510]
gi|288958885|ref|YP_003449226.1| lytic transglycosylase [Azospirillum sp. B510]
gi|288909980|dbj|BAI71469.1| hypothetical protein AZL_008310 [Azospirillum sp. B510]
gi|288911193|dbj|BAI72682.1| lytic transglycosylase [Azospirillum sp. B510]
Length = 2889
Score = 40.0 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 91/834 (10%), Positives = 200/834 (23%), Gaps = 55/834 (6%)
Query: 14 GRELSK------KELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVN 67
GR+ ++ E + D L AER E +S
Sbjct: 949 GRKPTQRDGLPLDEALTISDLTAANDRLLAVMQKVGAERVIETARVQAEMAATNAGKSAK 1008
Query: 68 DA-----IDEAYKRHQLRSDLDRVQAGVYGKSQA--LFNKLFFKAGSAEVPLEMKIKAAE 120
A R QL +D + L + + ++ +A E+ A
Sbjct: 1009 AAELEGIQAARMARAQLVQAVDDSNRAAAAEVAGADLVARAYGQSTAAVREAEIHQNALA 1068
Query: 121 TKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHS 180
Y + S L D Q + K Q + A RL +
Sbjct: 1069 EVARGTIEPYDAIVS-RLRAVDDAQRKVQAAQFDATLKQQTDDALRLADAWGRGANAARE 1127
Query: 181 QAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIA 240
+ + + +++ + R + + E+A
Sbjct: 1128 AGLANEALAEARKRGLAPTKDAGQIQDIGRGILARDAARR--SQEFAQMAAEQRRAVELA 1185
Query: 241 S----FVGEVFAERVRSTS-FKDPSIPSSEVGVKREFERVFHFKDSQAHMDYMEHFGVST 295
+ +G+ AER ++ + + + + + + + + +
Sbjct: 1186 NAEFGMLGQSNAERAKAVAILQTTNTLRDKGVDLTDAGTQAYIRQAGELARVNSQLQDAA 1245
Query: 296 NVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIAN---DQEASAGNKVLKDWLG 352
L + + +D+V+ + +A + + + + + A L
Sbjct: 1246 QNAANLAQPITTAFEDVVVGAKKAGDAGKALAEDLKRVFFRATVTKPAETWLTGTLTKLM 1305
Query: 353 RNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFIS 412
+ + + + + + +A G AL
Sbjct: 1306 SGPIGAANDNAPRPANDPGSLSRIVTSVSGGLGSSPSNAMWVQQAGSAAAVALDPQALTG 1365
Query: 413 RQMLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLH 472
R L D ++ + + + V L + + R +
Sbjct: 1366 RAPLPVAIRDGGQVEDLLR-SEARAQGVPEAVALAIGKLESGFRQHRDDGRLLTSSAGAQ 1424
Query: 473 S------KMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAF 526
KW G + D + + + + + ++ A +
Sbjct: 1425 GVMQLMPATAKWLGVDATDTRENVRGGI---KYLAMLGRQFGGDWNMVAAAYNAGPTRVQ 1481
Query: 527 FKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKN 586
A T + + + ++
Sbjct: 1482 QYLTQGRALPTETVTYVERFGKSVQTANTAVEGMAARAEGAATSQAATTQNLTTAQRDAV 1541
Query: 587 SKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQR 646
S LS + + AD + + D VS + + + +GA+ + +Q
Sbjct: 1542 SAALSTVKSMDSVSTAADDIDARLGMASDGVSTAAEK-LTAAQKEAAQGAVTFAQSSQQA 1600
Query: 647 LGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNILDLSNSAKMPKGASMALNHVWIQYSAT 706
+ G L + + + + G + + + Q +
Sbjct: 1601 GDFMVDGTQQALGALLSVIG------AASGIKGAGIP-GQVVQAGGPQGIANSFSQLGSL 1653
Query: 707 MALAGIG-----VASIKALLRGEDPSLPEVIYDGTLANGALLPYMDRLTKLVSKGDRAAI 761
+ GI ++S+K L P L + Y A L
Sbjct: 1654 LKTDGIFGSNSAISSVKGFLNTPIPGLSNIGYTAPQAAAVAKTSTGTLAGGEGASTGTGA 1713
Query: 762 GGLLGPVPSMVTNLTSSAVELAT--------KDNENSKVNATKAIRKTLPFMNM 807
GP N+ A I PF +
Sbjct: 1714 QAAGGPTWGNALGAVGYGFNAFQNFRSGNVIGGIGNTAATAMMFIPGAQPFAPL 1767
>gi|73669023|ref|YP_305038.1| trimethylamine permease [Methanosarcina barkeri str. Fusaro]
gi|72396185|gb|AAZ70458.1| trimethylamine permease [Methanosarcina barkeri str. Fusaro]
Length = 348
Score = 40.0 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 19/187 (10%)
Query: 615 DKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRA--GEALRMFQQFTTTP 672
D++S+ + D + V + T+ + L G GE +R ++F P
Sbjct: 46 DEMSSAIAKTSGDGISLVVTAVLITAFNALAVMLALMVWNGVLGKYGELVRTLKEFH--P 103
Query: 673 TGMFLNILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGVASIKALLR----GEDPSL 728
+ + + G+ +A+ + ++A +AG+ + ++L GE S
Sbjct: 104 CSKWFFLASIFGGPMAILGSFIAMGFIGGSFAA---VAGLLYPVVGSILAYYWYGEKISK 160
Query: 729 PEVIYDGTLANGALLPYMDRLTKLVSKGDRAAIGGLLGPVPSMVTNLTSSAVELATKDNE 788
+ + G + Y L +S G+ P + L ++A
Sbjct: 161 RAAVGIAVIVLGGISIYGGGLFTELSSGNV--------PWIGYLGGLMAAAGWGIEGAIA 212
Query: 789 NSKVNAT 795
++
Sbjct: 213 GKGLDIA 219
>gi|308044467|ref|NP_001183573.1| hypothetical protein LOC100502166 [Zea mays]
gi|238013152|gb|ACR37611.1| unknown [Zea mays]
Length = 239
Score = 40.0 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 1/132 (0%)
Query: 56 EDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMK 115
+ F +E I+S+ K R L + Q +A LE
Sbjct: 33 KRFSEEQIKSLESMFATQTKLEP-RQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERD 91
Query: 116 IKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQ 175
A + Y + + + ++ E +GK + N A+
Sbjct: 92 YSALRDDYDALLCSYESLKKEKHTLLKQLEKLAEMLHEPRGKYSGNADAAGAGDDVRSGV 151
Query: 176 RELHSQAHEAGL 187
+ + +AG
Sbjct: 152 GGMKDEFADAGA 163
>gi|289976628|gb|ADD21673.1| internal virion protein [Caulobacter phage Cd1]
Length = 1333
Score = 40.0 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 16/170 (9%)
Query: 661 ALRMFQQFTTTPTGMFLNILDL----SNSAKMPKGASMALNHVWIQYSATMALAGIGVAS 716
L+M QF T + K A++ + + A M + +G+
Sbjct: 1147 LLKMLFQFRTFSLTSVEKQWGRNMANHGALKSFGILVAAMSFAFPIHYARMQIKMLGMNE 1206
Query: 717 I-KALLRGEDPSLPEVIYDGTLANGALLPYMDRL----------TKLVSKGDRAAIGGLL 765
+ ++ S + A D + AIG
Sbjct: 1207 EDREKFAEKNLSAAALWRSTINYASASGLLGDLADVGGGFVAGWGGDNGELFADAIGARG 1266
Query: 766 GPVPSMVTNLTSSAVELATKDNENSKVNATKAIRKTLPFMNMWYLKNSFD 815
G ++ + + ++ L + E + + KAI+ +PF N+ YL+ +
Sbjct: 1267 GNQNQLLGGVLAPSLGLVQQAWEAANGDPHKAIKA-MPFANLPYLQPLVN 1315
>gi|260751943|ref|YP_003232481.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257757306|dbj|BAI28806.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
Length = 256
Score = 40.0 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A ++ + A R R A + R
Sbjct: 105 AGEWLTEDEIRAVLDAVRDAVRTVSCRVAEDARRIRAALTTTGQTLLTRQTRR----FRL 160
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKA---AETKVLSKFNE 129
K LD + A+ N+ G+ +EM + + +
Sbjct: 161 VVKESDHPCWLDEDDENLPVVLDAIVNR-----GARFSSVEMYLVSECVEHILSSGLACD 215
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 216 VLRIPDEPPRRWFDRGVLREVVREARAE 243
>gi|209922002|ref|YP_002296075.1| hypothetical protein ECSE_P1-0050 [Escherichia coli SE11]
gi|209915180|dbj|BAG80253.1| conserved hypothetical protein [Escherichia coli SE11]
Length = 258
Score = 39.6 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A S+ + A+R R A + R
Sbjct: 107 AGEWLTEDEIRAVLDAVRDAVRSVSCRVAEDAQRIRAALTTTGQTLLTRQTRR----FRL 162
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKA---AETKVLSKFNE 129
K LD + A+ N+ G+ +EM + + +
Sbjct: 163 VVKESDHPCWLDEDDENLPVVLDAILNR-----GARFSAVEMYLVSECVEHILSSGLACD 217
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 218 VLRIPDEPPRRWFDRGVLREVVREARTE 245
>gi|283784782|ref|YP_003364647.1| helicase IV [Citrobacter rodentium ICC168]
gi|282948236|emb|CBG87803.1| helicase IV [Citrobacter rodentium ICC168]
Length = 684
Score = 39.6 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 83/259 (32%), Gaps = 28/259 (10%)
Query: 3 PECIQVLNKAAGRE--LSKKELRRLEDGIVRAYVSLDGK--GLSKAERYRLAGLKAEEDF 58
+ ++ + G+ L++++ ++ I+RA+ +L L + + R A + +
Sbjct: 104 QQQLEAIAARTGQHAWLTREQTAGVQQQILRAFAALPLPLNRLLELDNCREALKQCQAWL 163
Query: 59 QK-ELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALF-----NKLFFKAGSAEVPL 112
+ + R ++ ++ +V++ +QA L AG+
Sbjct: 164 KDIDACRLAHNQAYTDAMLNEYAEFFRQVESSPLNPAQARAVVNGERALLVLAGAG---- 219
Query: 113 EMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDV---FDEMKGKK-----TQNEQA 164
K + + L +Q ++ E T + A
Sbjct: 220 SGKTSVLVARAGWLLARGEAAAEQILLLAFGRQAAQEIDERIRERLHTDAITARTFHALA 279
Query: 165 SRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLS 224
+++Q + + +++ +K F + Q S K A ++ + W
Sbjct: 280 LHIIRQGSKKAPTVSKLENDSAARHKLFISAWRQQCSEKKAHAKGWRQWLEEEMQW---- 335
Query: 225 RYKDIDGTPLSRSEIASFV 243
+G ++ +
Sbjct: 336 --TVAEGNFWDDEKLQRRL 352
>gi|257789840|ref|YP_003180446.1| putative ATP-binding protein [Eggerthella lenta DSM 2243]
gi|257473737|gb|ACV54057.1| putative ATP-binding protein [Eggerthella lenta DSM 2243]
Length = 1136
Score = 39.6 bits (90), Expect = 2.6, Method: Composition-based stats.
Identities = 59/367 (16%), Positives = 111/367 (30%), Gaps = 33/367 (8%)
Query: 8 VLNKAAGRELSKKELR-RLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRS- 65
+ A E++ KE + R+ + A+ L+ + F EL +S
Sbjct: 663 AVATNATAEITAKEQECQALCRTERSLRDKHWEDYDNAQAAF--DLERAQAFYDELAQSD 720
Query: 66 --VNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIK------ 117
A + +L VQ + Q + S +E +I
Sbjct: 721 AFREAESRRATAQGRLDEANKAVQKALVN--QQTNEERIQDTRSDIAEVERRINKRNPSG 778
Query: 118 -AAETKVLSKFNEYAEVGSKNLGFTLD--KQFGLDVFDEMKGKKTQNEQASRLVKQYFET 174
A + + ++F + + Q DV + + +A+R +
Sbjct: 779 IAMDDETRAQFIDLFSSANDRFDSDTSLVYQTSNDVQRIL---DARVAKAARAQQDARRR 835
Query: 175 QRELHSQAHE-----AGLDYKFFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDI 229
+ Q A FE+R ++RA+ + R LD L + +
Sbjct: 836 TELVLQQYKSTWKLLAADLSASFEDRDAYIGRYRQIRASGLPQYERKFLDVL--NSFSQD 893
Query: 230 DGTPLSRSEIASFVGEVFAERVRSTSFKDPSIPSSEV--GVKREFERVFHFKDSQAHMDY 287
T +S SEI + EV V S SS + ++ + R + +
Sbjct: 894 QITAIS-SEIRNAFREVRDRLVPVNRSLLLSEFSSGIHLQIEVKEHRSLRVNE---FLAD 949
Query: 288 MEHFGVSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVL 347
++ + L + ++ I + LG N S + D +V
Sbjct: 950 LKEITRGSWEEDDLEAAERRYARTAAIMKRLGSNDRSDQTWRMACLNTPDHMKFIAKEVA 1009
Query: 348 KDWLGRN 354
D N
Sbjct: 1010 GDGAVVN 1016
>gi|13449152|ref|NP_085368.1| hypothetical protein pWR501_0214 [Shigella flexneri 5a]
gi|31983666|ref|NP_858335.1| hypothetical protein CP0202 [Shigella flexneri 2a str. 301]
gi|13310700|gb|AAK18524.1|AF348706_213 orf, hypothetical [Shigella flexneri 5a]
gi|12329116|emb|CAC05847.1| unnamed protein product [Shigella flexneri]
gi|18462658|gb|AAL72430.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|281603961|gb|ADA76944.1| hypothetical protein SFxv_5049 [Shigella flexneri 2002017]
gi|333006543|gb|EGK26044.1| hypothetical protein SFK218_1316 [Shigella flexneri K-218]
Length = 256
Score = 39.6 bits (90), Expect = 2.7, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A S+ +G A R R A + + R
Sbjct: 105 AGEWLTEDEIRAVLDAVRDAVCSVSCRGAEDARRIRAALTTSGQTLLTRQTRR----FRL 160
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKA--AETKVLSKFN-E 129
K LD + A+ N+ G+ +EM + + E + S +
Sbjct: 161 VVKESDHPCWLDEDDENLPVVLDAILNR-----GARFSAVEMYLVSDCIEHILSSGLACD 215
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 216 VLRIPDEPPRRWFDRGVLREVVREARAE 243
>gi|260779191|ref|ZP_05888083.1| chromosome partition protein MukB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605355|gb|EEX31650.1| chromosome partition protein MukB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 1486
Score = 39.2 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 57/158 (36%), Gaps = 2/158 (1%)
Query: 43 KAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLF 102
+ + +LA + D Q+ A+ K L D D + L N+
Sbjct: 393 DSLKTQLADYQQALDVQQTRALQYQQAVQALEKAKTLLGDEDLTAERAHSLVSELKNQES 452
Query: 103 FKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNE 162
+A + ++ K+ + + +F + K G +++++ +V E + E
Sbjct: 453 EST-AALLSVKHKLD-MSSAAVEQFETALTLVRKIAGDSVERKNAAEVAKESIRQARDAE 510
Query: 163 QASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPM 200
Q ++ +Q+ R+L ++ + + Q
Sbjct: 511 QIAQNEQQWRAQHRDLERNLNQQRQACELVDAYQKQHH 548
>gi|308477855|ref|XP_003101140.1| CRE-MYO-2 protein [Caenorhabditis remanei]
gi|308264068|gb|EFP08021.1| CRE-MYO-2 protein [Caenorhabditis remanei]
Length = 1960
Score = 39.2 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 14/183 (7%)
Query: 10 NKAAGRELSKKELRRLEDGIVRAYVSLDGK-GLSKAERYRLAGLKAEEDFQKELIRSVND 68
A +L K ++ LED + + K +R LK ++ +EL +S +D
Sbjct: 1031 QNLAANKLKAKLMQSLEDSEQTMEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSD 1090
Query: 69 AIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFN 128
A + ++ +L QA KL E ++K +
Sbjct: 1091 AENALRRKETELHNL----GMKLEDEQAAVAKL----QKGIQQDEARVKDLHD----QLA 1138
Query: 129 EYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQAS-RLVKQYFETQRELHSQAHEAGL 187
+ + + D+Q D E +++ A L K+ +L E+GL
Sbjct: 1139 DEKDARQRADRSRADQQAEYDELTEQLEDQSRATAAQIELGKKKDAELTKLRRDLEESGL 1198
Query: 188 DYK 190
+
Sbjct: 1199 KFG 1201
>gi|226201026|ref|YP_002756638.1| hypothetical protein p026VIR_p087 [Escherichia coli]
gi|219881655|gb|ACL52025.1| hypothetical protein [Escherichia coli]
Length = 256
Score = 39.2 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A S+ + A R R A + R
Sbjct: 105 AGEWLTEDEIRAVLDAVRDAVCSVSCRVAEDARRIRAALTTTGQTLLTRQTRR----FRL 160
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKI--KAAETKVLSKFN-E 129
K LD + A+ N+ G+ +EM + + E + S +
Sbjct: 161 VVKESDHPCWLDEDDENLPVVLDAILNR-----GARFSSVEMYLVCECVEHILSSGLACD 215
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 216 VLRIPDEPSRRWFDRDILREVVREARAE 243
>gi|239907128|ref|YP_002953869.1| hypothetical protein DMR_24920 [Desulfovibrio magneticus RS-1]
gi|239796994|dbj|BAH75983.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 3195
Score = 39.2 bits (89), Expect = 3.2, Method: Composition-based stats.
Identities = 54/482 (11%), Positives = 139/482 (28%), Gaps = 50/482 (10%)
Query: 38 GKGLSKA-ERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQL-----------RSDLDR 85
+ + A +R A L A + A+ + + DR
Sbjct: 2293 WRAMRAAYDRLLDARLAAYRRLVDKARAGYARAVTRRLIEAGIPVEAARAFDAAAYNADR 2352
Query: 86 VQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAE-----TKVLSKFNEYAEVGS-KNLG 139
+ A + A V ++ ++ S +G +
Sbjct: 2353 ILADALAPYADKVKAVVAAARKDGVTIKGRLADVRLTDENGTTFSFAEMVERMGQLRGFY 2412
Query: 140 FTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQP 199
++ G V + +E+ R K++ + +L + AG +
Sbjct: 2413 APRLREAGDFVVRGRRTGTDGSEERFRAHKEWRRSAEKLRLEMARAGWA-------MDTV 2465
Query: 200 MSVDKLRATKKDDFVRSMLDWLDLSRYKDIDGTPLSRSEIASFVGEVFAERVRSTSFKDP 259
++KL + ++ L+L++ + + A VGE+ +
Sbjct: 2466 TRLEKLPEATQG-----VIKTLELAKTVETAVNQVGEDVEAGLVGEILEALADEVKARGF 2520
Query: 260 SIPSSEVGVKREFERVFHFKDSQ---AHMDYMEHFGVSTNVNTILTSELASLSKDIVI-A 315
S + +FKD+ + +G++ + + +
Sbjct: 2521 RSQSIRRSGRHGEVVQGYFKDAVERFSRYAGSTAYGLAKAEAAQKAATALFATDGQGLDI 2580
Query: 316 RELGPNADSFVKQMIVQTIANDQEASAGNKV---LKDWLGRNKLEVRQEAMLQMWEVMRY 372
R+ G + + N + A AG++V K L ++ L M
Sbjct: 2581 RKEG----EVYRLAVDYLAENLRNAEAGDRVFALAKSMASLKYLGFNAKSALVNLTSMAT 2636
Query: 373 GETVENTGWANWMAGLRSAAGASMLGQHPIGALLE-DGFISRQMLSRVGIDKEAIQRINK 431
+A G G + +G+ + A+ + G ++ + ++ + + +
Sbjct: 2637 SVPAALHAYAMAGKG-----GWARIGREIVRAMGDYLGLMAGRSGRLTAGERAFMAQARR 2691
Query: 432 MPLKERMELLSDVGLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAEYLDKKRISS 491
L + + +Y + G+ + ++++ + + ++
Sbjct: 2692 ESLDDPQFAREALSVYRD---TAGQAWTWAMGKALLLFGATERLNRGATLLAGYRLARAA 2748
Query: 492 HA 493
Sbjct: 2749 GT 2750
>gi|187933425|ref|YP_001886912.1| hypothetical protein CLL_A2724 [Clostridium botulinum B str. Eklund
17B]
gi|187721578|gb|ACD22799.1| phage tail tape measure protein, TP901 family [Clostridium
botulinum B str. Eklund 17B]
Length = 1019
Score = 39.2 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 101/365 (27%), Gaps = 13/365 (3%)
Query: 355 KLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDGFISRQ 414
++ A+ + + G T LR+ + H L +
Sbjct: 186 NVKETTSALPGLLSLASAGSLDLATATDIASGTLRAFNIDAAQTSHVADVLALSAAATNS 245
Query: 415 MLSRVGIDKEAIQRINKMPLKERMELLSDVGLYAEGVVAH---GRNMMEGSDAFQIGHKL 471
++ +G + + + + + GL + + G + + K
Sbjct: 246 DVTDLGETMKYAAPVAQALGISFEDTAAASGLLSNANIKGSQAGTILRQTMARLASPTKE 305
Query: 472 HSKMHKWSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLD 531
+K+ K G D + + G + + +SL L + R D F +
Sbjct: 306 AAKVMKAYGINAFDAQGN------MKPLNGVINNLNSSLGKLTSQKRADIISTVFDTESM 359
Query: 532 DTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLS 591
++ + T + ++ L +LA + + +K
Sbjct: 360 SGVLALMNQGGQSLGDLSKKLTETKGSADEMEKTKLDNLAGQWTILKSAVEGMKIELG-- 417
Query: 592 PEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLT 651
E+ +Q +I + D V + + + G L
Sbjct: 418 -EKLAPYAKQFVTWFTAKIPSITDSVVKFVDTISNNIGTIKAAGGAFLGLTGAFVGMFAI 476
Query: 652 YKRGTRAGEALRMFQQFTTTPTG-MFLNILDLSNSAKMPKGASMALNHVWIQYSATMALA 710
K GT G ++ F T T + + AL A + +A
Sbjct: 477 NKIGTTVGTFGKLLGGFKTATTADALVKTTSAMQGLGLASKIIPALLSPTGLAIAGIGIA 536
Query: 711 GIGVA 715
G+ A
Sbjct: 537 GLVAA 541
>gi|51892253|ref|YP_074944.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
gi|81692142|sp|Q67QE3|MUTS2_SYMTH RecName: Full=MutS2 protein
gi|51855942|dbj|BAD40100.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 793
Score = 38.8 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 15 RELSKKELRRLEDGI--VRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
R+ +E R+ED I + A + K ++A R R + E++++ + A +
Sbjct: 503 RQFLTQEQERVEDLIQGIHATRAELEKERAEAHRLRAEAQRMREEYERRYGDAQRKAAET 562
Query: 73 AYK-----RHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKV 123
K + L + +A + QAL + + A ++ A V
Sbjct: 563 VEKARAQAQQILATARREAEAVIAELKQALREQREAERMQAIQSARSRLARARQAV 618
>gi|116006854|ref|YP_788037.1| hypothetical protein pO86A1_p071 [Escherichia coli]
gi|115500709|dbj|BAF33940.1| hypothetical protein [Escherichia coli]
Length = 275
Score = 38.8 bits (88), Expect = 4.0, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 12/148 (8%)
Query: 13 AGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDE 72
AG L++ E+R + D + A S+ + A R R A + R
Sbjct: 124 AGEWLTEDEIRAVLDAVRDAVCSVSYQVAEDARRIRAALTTTGQTLLTRQTRR----FRL 179
Query: 73 AYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKA---AETKVLSKFNE 129
K LD + A+ N+ G+ +EM + + +
Sbjct: 180 VVKESDHPCWLDEYDENLPVVLDAILNR-----GARFSSVEMYLVSECVEHILSSGLACD 234
Query: 130 YAEVGSKNLGFTLDKQFGLDVFDEMKGK 157
+ + D+ +V E + +
Sbjct: 235 VLRIPDEPPRRWFDRGVLREVVREARNE 262
>gi|294895705|ref|XP_002775265.1| troponin T, skeletal muscle, putative [Perkinsus marinus ATCC
50983]
gi|239881339|gb|EER07081.1| troponin T, skeletal muscle, putative [Perkinsus marinus ATCC
50983]
Length = 705
Score = 38.8 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 9/169 (5%)
Query: 20 KELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQL 79
+EL+ LE I+ + K E+ + Q+ +R +A + +L
Sbjct: 357 RELKALESRILWNMRREEKSAERKMEKEAQKDITQWRREQETSLREGIEAFRRTTHQREL 416
Query: 80 RSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAE-TKVLSKFNEYAEVGSKNL 138
+ +L+ VQ K +A +L S + E I+ K +E + +
Sbjct: 417 KENLEFVQFKRERKRRAREAELELITQSYDAQREKSIQRENCEKERITADEVFKAEQRK- 475
Query: 139 GFTLDKQFGLDVFDEMKGKKTQNEQASRL---VKQYFETQRELHSQAHE 184
D++ + +K ++ + EQA RL ++ +R+L ++ +
Sbjct: 476 ----DREETRKLVRALKEEEARKEQAERLYNSAEKMEYEKRQLLAEKNR 520
>gi|134297319|ref|YP_001121054.1| hypothetical protein Bcep1808_3229 [Burkholderia vietnamiensis G4]
gi|134140476|gb|ABO56219.1| hypothetical protein Bcep1808_3229 [Burkholderia vietnamiensis G4]
Length = 875
Score = 38.8 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 46/136 (33%), Gaps = 5/136 (3%)
Query: 10 NKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDA 69
+AA R++++ + I + + LS +ER A L+A + +K + +A
Sbjct: 541 EEAAARKITEGLIGGNRQRIEALQLQREMLDLSASER---AVLQARNELEKSATAARKEA 597
Query: 70 --IDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKF 127
I +A R Q ++ A + L S E + ++ +
Sbjct: 598 SQIQDADLRAQTIEAINDALARQLPIVENLIRANAEYQRSTEFGAKAALRTYIEDATNAA 657
Query: 128 NEYAEVGSKNLGFTLD 143
+ + D
Sbjct: 658 KQAERAVTGAFKSMED 673
>gi|329938772|ref|ZP_08288168.1| integral membrane [Streptomyces griseoaurantiacus M045]
gi|329302263|gb|EGG46155.1| integral membrane [Streptomyces griseoaurantiacus M045]
Length = 852
Score = 38.8 bits (88), Expect = 4.4, Method: Composition-based stats.
Identities = 40/381 (10%), Positives = 97/381 (25%), Gaps = 19/381 (4%)
Query: 293 VSTNVNTILTSELASLSKDIVIARELGPNADSFVKQMIVQTIANDQEASAGNKVLK---- 348
V LT + +D+ + R +G + Q + A L
Sbjct: 284 TGFVVAGALTVAVNGQRRDLALMRAVGATPKQIRRLAAAQAMVVTAMAYVPGAALGYLLA 343
Query: 349 ---DWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHPIGAL 405
L ++ V L + + V A + ++ +
Sbjct: 344 DRLRDLLVDRGAVPSALPLTVSPLPALATAVLLAAAVQLAARGAAWRTSTRPATEAVAES 403
Query: 406 LEDGFISRQMLSRVGIDKE-AIQRINKMPLKERMELLSDVGLYAEGVVAHGRNMMEGSDA 464
+ ++ + G+ A ++ PL R +G A + +
Sbjct: 404 RTEPREPARLRTYGGLLVIVAATTLSAAPLLSRT----AIGAAATQMAGIVGAIGLAMAG 459
Query: 465 FQIGHKLHSKMHK-----WSGAEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRL 519
+ + + + + +L + +AL V + + A +
Sbjct: 460 PALTRWAGTALARRLRPGTTAPTWLAVANVRGYALRVAGVVSTLAMAVAFVLTYAFTLTT 519
Query: 520 DPSIKAF-FKQLDDTDFTVIKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIA 578
A + + V R +K + ++
Sbjct: 520 VAEATAQDTRAGTLAQYRVSAPGLGGLPTGLLDDVRDTPGVKEAAPVTTTTVVYSYRELG 579
Query: 579 YHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMH 638
+ + L+P+ + L + + + +S + + V + +
Sbjct: 580 DVTTESAGATILTPDAPRVLDLDVREGGLDRLRGATAAISEETARSLDAAVGDRITLTLG 639
Query: 639 TSLFDRQRLGLLTYKRGTRAG 659
R+ + Y RG G
Sbjct: 640 DGTTAHPRV-VAVYGRGLGFG 659
>gi|223994133|ref|XP_002286750.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978065|gb|EED96391.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1284
Score = 38.4 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 43/318 (13%), Positives = 92/318 (28%), Gaps = 24/318 (7%)
Query: 19 KKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAY---- 74
++EL +E + + + + +R K E+ + S A +A
Sbjct: 315 ERELEVVETEMNKDRGVPEMGARKEVDRVSEVAAKLVEELPRTQALSRGSAGADAGAGVE 374
Query: 75 --KRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAE 132
K ++ + + F S + KAA S +
Sbjct: 375 RGKHQSAHRQYMNLEEYADALHAFDSSGVLFDDESHPSSGMWEDKAALELYSSSLQSRLK 434
Query: 133 VGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFF 192
+ L ++T +E S L + E +++A Y
Sbjct: 435 DAMDRTRSLEKRLVVL--------ERTGDEIVSSLCEDLVEVTG----HSNKAEARYVKK 482
Query: 193 ENRIPQPMSVDKLRATKKDDFVRSMLDWLDLS--RYKDIDGTPLSRSEIASFVGEVFAER 250
+ + +++R K+ + L+ G+ + + A
Sbjct: 483 GKELQRKRRREEVRLRNKERQAERRVRKLEERLLPISGEAGSQFNHKDFADSDSSDGNTT 542
Query: 251 VRSTSFKDPSIPS----SEVGVKREFERVFHFKDSQAHMDYMEHFGVSTNVNTILTSELA 306
+D I + + K E E+ H + + E F + +V ++ +
Sbjct: 543 DEDDEEEDDEIRLEKKLASIKSKNEQEKAAHESEVDSIRRQCEQFKLRLSVVRLVMAGDD 602
Query: 307 SLSKDIVIARELGPNADS 324
+L I I L P+
Sbjct: 603 NLRDYIAILDRLNPSVQH 620
>gi|320100517|ref|YP_004176109.1| hypothetical protein Desmu_0308 [Desulfurococcus mucosus DSM 2162]
gi|319752869|gb|ADV64627.1| hypothetical protein Desmu_0308 [Desulfurococcus mucosus DSM 2162]
Length = 546
Score = 38.4 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 80 RSDLDRVQAGVYG-KSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNL 138
R L+ ++ G+ G +AL +L AGS L + + ++L + + G K L
Sbjct: 91 RRILEALEKGLLGAGREALVRELVENAGSVVDELAARRRGLSKRLLLQLLDSPIPGYKYL 150
Query: 139 GFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQ---AHE 184
D ++ ++G ++E+ +R+V+ +T RE ++
Sbjct: 151 RDYFDP--YRELCGVIRGAPCRDEEVARVVEYVRQTLRETGRDMVSFND 197
>gi|163792657|ref|ZP_02186634.1| Helicase-like protein [alpha proteobacterium BAL199]
gi|159182362|gb|EDP66871.1| Helicase-like protein [alpha proteobacterium BAL199]
Length = 936
Score = 38.4 bits (87), Expect = 5.6, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 77/272 (28%), Gaps = 21/272 (7%)
Query: 15 RELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRS---VNDAID 71
R+L+ EL ++ R + A E+ + E IR N +
Sbjct: 251 RKLTPAELAQIAGRAGRHMNDGSFGVTMDCRPLDEEIVSAIEEHRFESIRQLHWRNADLS 310
Query: 72 EAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAA-ETKVLSKFNEY 130
A R LR+ +R L K A L + T S+
Sbjct: 311 FATVRDLLRTLDERPPH------DFLIRKRDADDQRALEALSRLPEVTDRTTASSRIRLL 364
Query: 131 AEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYK 190
+V + + + ++ T+ + RL + E + D
Sbjct: 365 WDVCQIPDFQKIMSESHARLLVQVFTHLTEGSE--RLPSNW---VDEQMDRFDRTDGDID 419
Query: 191 FFENRIPQPMSVDKLRATKKDDFVRSMLDWLDLSRYKDID-GTPLSRSEIASFVGEVFAE 249
RI + + T + +++ LD +R + L FV A
Sbjct: 420 TLAGRIAHVRTWTYI--TNRGEWIDDPLDRQQRARAIEDRLSDALHDRLTQRFVDRRAAT 477
Query: 250 RVRSTSFKDPSIPSSEVGVKR---EFERVFHF 278
R D + ++ E RV H
Sbjct: 478 LSRRLQDDDAELIAAVAADGAVLVEGHRVGHL 509
>gi|288960723|ref|YP_003451063.1| hypothetical protein AZL_a09880 [Azospirillum sp. B510]
gi|288913031|dbj|BAI74519.1| hypothetical protein AZL_a09880 [Azospirillum sp. B510]
Length = 426
Score = 38.4 bits (87), Expect = 5.6, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 16/143 (11%)
Query: 10 NKAAGRELSKKELRRLEDGIVRA---YVSLDGKGLSK--AERYRLAGLKAEEDF-----Q 59
+A GR+L+ +E E + R S+ AE E+
Sbjct: 170 EQALGRKLADEEALLTERVVTRQSVLQTRQAWNQASQEVAEIANQIAQLDNEELDLRFRA 229
Query: 60 KELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFK------AGSAEVPLE 113
+ +R +A+ EA +R + R+Q + + N++ G + +E
Sbjct: 230 DQRVRDAENALGEAERRLAQIGETRRMQTDIRAPASGRVNEIQANAGALVQHGENILSIE 289
Query: 114 MKIKAAETKVLSKFNEYAEVGSK 136
+ + + + N+ +
Sbjct: 290 TQGNGLQLLMFADQNQGDRLKPG 312
>gi|300726651|ref|ZP_07060086.1| putative exonuclease sbcCD, C subunit [Prevotella bryantii B14]
gi|299776069|gb|EFI72644.1| putative exonuclease sbcCD, C subunit [Prevotella bryantii B14]
Length = 1032
Score = 38.0 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 58/176 (32%), Gaps = 9/176 (5%)
Query: 22 LRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRS 81
++ L D +++ K KAE+ + +L EA KR QL
Sbjct: 218 IKNLYDQAKANRKTVEVKL--KAEKEHTMAEDEVKQLNDQLKLLTEQQKAEAEKRQQLEG 275
Query: 82 DLDRVQAGVYGK--SQALFN-----KLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVG 134
+ ++ + K + L +L FK SA++ + + + + +
Sbjct: 276 QITVLKNYLAAKDEKEQLNKQLTEYRLHFKILSADILYRQQQLQIADSYIQELQTWLKNH 335
Query: 135 SKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYK 190
+ G + + + KK + + ++ + L + A D K
Sbjct: 336 EEREGVYSQVDLISERLKQWRKKKDDGRRLAEGLEAENKKTTLLERTKNVADSDLK 391
>gi|303289573|ref|XP_003064074.1| kinesin-II motor subunit protein [Micromonas pusilla CCMP1545]
gi|226454390|gb|EEH51696.1| kinesin-II motor subunit protein [Micromonas pusilla CCMP1545]
Length = 897
Score = 38.0 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 65/190 (34%), Gaps = 18/190 (9%)
Query: 2 KPECIQVLNKAAGRELSKKELRRL----EDGIVRAYVS-LDGKGLSKAERYRLAGLKAEE 56
K + L ++ ++ R+ E+ R + +D + ++ E+ R+A +
Sbjct: 501 KRQVQDELAGKLKSATTQADIDRIHRDAEERTQREMRAIMDDRATTEEEKRRIASEMEAQ 560
Query: 57 DFQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMKI 116
+ E A E K+ L++ + ++ + + L + + E
Sbjct: 561 RLEIESQTEA--ASREREKKEALQAQIKAIEGKLLHGADDLEAR-------NKQLEEAAA 611
Query: 117 KAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQN--EQASRLVKQYFET 174
K + + + + +K D K ++ + + ++ +Y
Sbjct: 612 KGVRDIADRERLKLER--QRAVAAMEEKALLSDEKFASKKEEVADKTRKLKKMFSKYQTA 669
Query: 175 QRELHSQAHE 184
+++L A E
Sbjct: 670 KQDLEEHADE 679
>gi|125654623|ref|YP_001033817.1| ICE nucleation protein [Rhodobacter sphaeroides 2.4.1]
gi|77386283|gb|ABA81712.1| Ice nucleation protein [Rhodobacter sphaeroides 2.4.1]
Length = 1561
Score = 38.0 bits (86), Expect = 7.3, Method: Composition-based stats.
Identities = 49/371 (13%), Positives = 105/371 (28%), Gaps = 17/371 (4%)
Query: 370 MRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDG-----FISRQMLSRVGIDKE 424
+ ET + + +A A+ LG + AL + + V
Sbjct: 740 VAALETADVAALSTAGVKGVGSAQAAALGSAQVAALTTAQVGQLSTTALKGFGSVQASGL 799
Query: 425 AIQRINKMPLKERMELLSDV--GLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAE 482
++ + + +L + GL +VA + Q+G +++ + A+
Sbjct: 800 TTAQVAALTTAQLSQLSTAAVKGLGTAQIVALTTGQTAALGSAQLGALSTAQVAAFETAD 859
Query: 483 YLDKKRISSHALIVYNQIGRMTDTYASLKDLK----ADPRLDPSIKAFFKQLDDTDFTVI 538
+ L + T A+L + + ++ A L T +
Sbjct: 860 AAALTTTALKGLTTAQVVALTTGQAAALGSAQVAGLSSTQIAALETADLAALTTTAVKGL 919
Query: 539 KRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQEL 598
+ S G + A T + L A ++ + + + + +
Sbjct: 920 GSTQVSSLTTGQVAALTTVQVAALSTAAVKGVGSVQASGLTTAQVAALTTAQVAQLSTAA 979
Query: 599 QQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRA 658
+ L + + + L Q + + + +
Sbjct: 980 LKGLGTAQIVALTTAQAAKLGSDQVAALSTAQVAALETADLATLSATGVKGFGSAQAAAL 1039
Query: 659 GEALRMFQQFTTTPTGMFL----NILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGV 714
G A FTT ++ + AL + +T A+ G+G
Sbjct: 1040 GSAQ--VAAFTTAQVAALTTAAVKGFGSVQASGLTTAQVAALTTAQLSQLSTAAVKGLGT 1097
Query: 715 ASIKALLRGED 725
A I AL G+
Sbjct: 1098 AQIVALTTGQT 1108
>gi|126464806|ref|YP_001041782.1| large exoprotein involved in heme utilization or adhesion
[Rhodobacter sphaeroides ATCC 17029]
gi|126106621|gb|ABN79146.1| large exoprotein involved in heme utilization or adhesion
[Rhodobacter sphaeroides ATCC 17029]
Length = 1561
Score = 38.0 bits (86), Expect = 7.3, Method: Composition-based stats.
Identities = 49/371 (13%), Positives = 106/371 (28%), Gaps = 17/371 (4%)
Query: 370 MRYGETVENTGWANWMAGLRSAAGASMLGQHPIGALLEDG-----FISRQMLSRVGIDKE 424
+ ET + + +A A+ LG + AL + + V
Sbjct: 740 VAALETADVAALSTAGVKGLGSAQAAALGSAQVAALTTTQVGQLSTTALKGFGSVQASGL 799
Query: 425 AIQRINKMPLKERMELLSDV--GLYAEGVVAHGRNMMEGSDAFQIGHKLHSKMHKWSGAE 482
++ + + +L + GL +VA + Q+G +++ + A+
Sbjct: 800 TTAQVAALTTTQLSQLSTAAVKGLGTAQIVALTTGQTAALGSAQLGALSTAQVAAFETAD 859
Query: 483 YLDKKRISSHALIVYNQIGRMTDTYASLKDLK----ADPRLDPSIKAFFKQLDDTDFTVI 538
+ L + T A+L + + ++ A L T +
Sbjct: 860 AAALTTTALKGLTTAQVVALTTGQAAALGSAQVAGLSSTQIAALETADLAALTTTAVKGL 919
Query: 539 KRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQEL 598
+ S G + A T + + L A ++ + + + + +
Sbjct: 920 GSTQVSSLTTGQVAALTTAQVAALSTAAVKGVGSVQASGLTTAQVAALTTAQVAQLSTAA 979
Query: 599 QQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTRA 658
+ L + + + L Q + + + +
Sbjct: 980 LKGLGTAQIVALTTAQAAKLGSDQVAALSTAQVAALETADLATLSATGVKGFGSAQAAAL 1039
Query: 659 GEALRMFQQFTTTPTGMFL----NILDLSNSAKMPKGASMALNHVWIQYSATMALAGIGV 714
G A FTT ++ + AL + +T A+ G+G
Sbjct: 1040 GSAQ--VAAFTTAQVAALTTAAVKGFGSVQASGLTTAQVAALTTAQLSQLSTAAVKGLGT 1097
Query: 715 ASIKALLRGED 725
A I AL G+
Sbjct: 1098 AQIVALTTGQT 1108
>gi|24641597|ref|NP_536797.2| smrter, isoform A [Drosophila melanogaster]
gi|24641599|ref|NP_727634.1| smrter, isoform B [Drosophila melanogaster]
gi|24641601|ref|NP_727635.1| smrter, isoform C [Drosophila melanogaster]
gi|22832155|gb|AAF48195.2| smrter, isoform A [Drosophila melanogaster]
gi|22832156|gb|AAN09315.1| smrter, isoform B [Drosophila melanogaster]
gi|22832157|gb|AAF48196.2| smrter, isoform C [Drosophila melanogaster]
Length = 3604
Score = 38.0 bits (86), Expect = 7.4, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 50/195 (25%), Gaps = 33/195 (16%)
Query: 10 NKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDA 69
A + + KEL + V L + AE+ A K + L + D
Sbjct: 766 AALAKEQRAAKELND-NNNDQEPMVELSWRSQMLAEKIYAANRKTAQAQHSMLQNAAADE 824
Query: 70 IDEAYKR--------------HQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMK 115
L + + Q+ + KL + + L K
Sbjct: 825 SSPGSVAGRPWLPLYNQPLDVEALAMLIRQHQSQIRAPLLLHIRKLKAERWAHNQGLVEK 884
Query: 116 IKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQ 175
+ + + +++F VF E++ +
Sbjct: 885 YTKDQADWQRRCERMEASAKRKAREAKNREFFEKVFTELRKQ------------------ 926
Query: 176 RELHSQAHEAGLDYK 190
RE + + G K
Sbjct: 927 REDKERFNRVGSRIK 941
>gi|147676372|ref|YP_001210587.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
gi|146272469|dbj|BAF58218.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
Length = 468
Score = 38.0 bits (86), Expect = 7.8, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 65/204 (31%), Gaps = 26/204 (12%)
Query: 12 AAGRELSKKELRRLEDGIVRAYVSLDG--------------KGLSKAERYRLAGLKAEED 57
AG+ L+++E LE ++++ SL G + +++AE + A +
Sbjct: 69 TAGQLLAEQESDNLEAQVIQSSASLKGALAKLELLKNGSTAEEIAQAEANVVMAQAAYDL 128
Query: 58 FQKELIRSVNDAIDEAYKRHQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMK-I 116
+ L R + A R L S + QA + G+ +E +
Sbjct: 129 TKTNLERYQALFQEGAVSRADLDSASNEYVNAEAKLKQAQESLKALLNGNRREDIEAQAA 188
Query: 117 KAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASR-----LVKQY 171
+ ++ + + A G+K V E+ G + Q A+
Sbjct: 189 QVESSRAQLQIAQKALAGTKLFSPIN------GVVSEVNGGEGQRAAANNNSTSSGTGFI 242
Query: 172 FETQRELHSQAHEAGLDYKFFENR 195
L +A D E
Sbjct: 243 VVISDALQVRAQVNEADIGRLETG 266
>gi|39937742|ref|NP_950018.1| methyl-accepting chemotaxis receptor/sensory transducer
[Rhodopseudomonas palustris CGA009]
gi|39651602|emb|CAE30124.1| methyl-accepting chemotaxis receptor/sensory transducer
[Rhodopseudomonas palustris CGA009]
Length = 559
Score = 38.0 bits (86), Expect = 7.8, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 60/192 (31%), Gaps = 5/192 (2%)
Query: 481 AEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTD---FTV 537
E + ++GR+ Y + L+P+IKA D + F
Sbjct: 66 LEATLALEDPGSLALHRERLGRLKKEYQERHAFWSKAPLEPAIKARLIDDSDREVQKFWR 125
Query: 538 IKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQE 597
I A + + + + K+L A A + D + ++ + + +
Sbjct: 126 IVDASLLPAIEAKDPDTSMQAYKDLTAAYTAHRAIIDDIVKRTNDLNAATEAATAVRVTD 185
Query: 598 LQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTR 657
L L + + ++ + +++ + M + + + +RG
Sbjct: 186 LNYLLWGVSGTVFLLFVAGLTAIVKGVIVPITG--MTEVMRRLASGDRAVAIPAIERGDE 243
Query: 658 AGEALRMFQQFT 669
G R Q F
Sbjct: 244 VGAMARAVQVFK 255
>gi|329889871|ref|ZP_08268214.1| parB-like nuclease domain protein [Brevundimonas diminuta ATCC
11568]
gi|328845172|gb|EGF94736.1| parB-like nuclease domain protein [Brevundimonas diminuta ATCC
11568]
Length = 593
Score = 37.6 bits (85), Expect = 8.2, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 63/204 (30%), Gaps = 19/204 (9%)
Query: 27 DGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDAIDEAYKRHQLRSD--LD 84
D VR D + AE A +A DA DE+ R Q R ++
Sbjct: 384 DRRVRNEAMADSVETASAETVFDAKRRAVLALLG------FDAEDESVARAQARETPVVE 437
Query: 85 RVQAGVYGKSQALFNKLFFKAGSAEVPLEMKIKAAETKVLSKFNEYAEVGSKNLGFTLDK 144
V +F G ++A + E+ G D+
Sbjct: 438 LFARMVKLSDDEVFAVAAVIMGETLAVGGPLVEAVGAYLKVDMAEWWTPDDAFFGLLRDR 497
Query: 145 QFGLDVFDEMKGKKTQNEQASRLVKQYFETQRELHSQAHEAGLDYKFFENRIPQPMSVDK 204
+ ++ GK+ + + VK TQ+ + + P+ M+
Sbjct: 498 AVANALLRDVGGKRIADANVAEKVK----TQKTILRDFLAGSGGRAKVDGWTPKWMAFPP 553
Query: 205 LRATKK-----DDF--VRSMLDWL 221
R T + D + V++++ L
Sbjct: 554 ARYTDRIYAPVDRWGAVKTVMRRL 577
>gi|192293523|ref|YP_001994128.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris TIE-1]
gi|192287272|gb|ACF03653.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris TIE-1]
Length = 559
Score = 37.6 bits (85), Expect = 8.2, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 60/192 (31%), Gaps = 5/192 (2%)
Query: 481 AEYLDKKRISSHALIVYNQIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTD---FTV 537
E + ++GR+ Y + L+P+IKA D + F
Sbjct: 66 LEATLALEDPGSLALHRERLGRLKKEYQERHAFWSKAPLEPAIKARLIDDSDREVQKFWR 125
Query: 538 IKRAKAMSSPDGYLYARTPSTIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQE 597
I A + + + + K+L A A + D + ++ + + +
Sbjct: 126 IVDASLLPAIEAKDPDTSMQAYKDLTAAYTAHRAIIDDIVKRTNDLNAATEAATAVRVTD 185
Query: 598 LQQQLADLERKEINILKDKVSNKMHALVLDNVQTSVRGAMHTSLFDRQRLGLLTYKRGTR 657
L L + + ++ + +++ + M + + + +RG
Sbjct: 186 LNYLLWGVSGTVFLLFVAGLTAIVKGVIVPITG--MTEVMRRLASGDRAVAIPAIERGDE 243
Query: 658 AGEALRMFQQFT 669
G R Q F
Sbjct: 244 VGAMARAVQVFK 255
>gi|5815245|gb|AAD52614.1|AF175223_1 SANT domain protein SMRTER [Drosophila melanogaster]
Length = 3469
Score = 37.6 bits (85), Expect = 8.6, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 50/195 (25%), Gaps = 33/195 (16%)
Query: 10 NKAAGRELSKKELRRLEDGIVRAYVSLDGKGLSKAERYRLAGLKAEEDFQKELIRSVNDA 69
A + + KEL + V L + AE+ A K + L + D
Sbjct: 631 AALAKEQRAAKELND-NNNDQEPMVELSWRSQMLAEKIYAANRKTAQAQHSMLQNAAADE 689
Query: 70 IDEAYKR--------------HQLRSDLDRVQAGVYGKSQALFNKLFFKAGSAEVPLEMK 115
L + + Q+ + KL + + L K
Sbjct: 690 SSPGSVAGRPWLPLYNQPLDVEALAMLIRQHQSQIRAPLLLHIRKLKAERWAHNQGLVEK 749
Query: 116 IKAAETKVLSKFNEYAEVGSKNLGFTLDKQFGLDVFDEMKGKKTQNEQASRLVKQYFETQ 175
+ + + +++F VF E++ +
Sbjct: 750 YTKDQADWQRRCERMEASAKRKAREAKNREFFEKVFTELRKQ------------------ 791
Query: 176 RELHSQAHEAGLDYK 190
RE + + G K
Sbjct: 792 REDKERFNRVGSRIK 806
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.305 0.109 0.253
Lambda K H
0.267 0.0337 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,124,902,010
Number of Sequences: 14124377
Number of extensions: 403096336
Number of successful extensions: 1347164
Number of sequences better than 10.0: 473
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 488
Number of HSP's that attempted gapping in prelim test: 1345834
Number of HSP's gapped (non-prelim): 1100
length of query: 864
length of database: 4,842,793,630
effective HSP length: 148
effective length of query: 716
effective length of database: 2,752,385,834
effective search space: 1970708257144
effective search space used: 1970708257144
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 85 (37.6 bits)