BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781203|ref|YP_003065616.1| hypothetical protein
CLIBASIA_05550 [Candidatus Liberibacter asiaticus str. psy62]
(478 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781203|ref|YP_003065616.1| hypothetical protein CLIBASIA_05550 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040880|gb|ACT57676.1| hypothetical protein CLIBASIA_05550 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120669|gb|ADV02492.1| hypothetical protein SC1_gp035 [Liberibacter phage SC1]
gi|317120813|gb|ADV02634.1| hypothetical protein SC1_gp035 [Candidatus Liberibacter asiaticus]
Length = 478
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ 60
MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ
Sbjct: 1 MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ 60
Query: 61 PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP 120
PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP
Sbjct: 61 PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP 120
Query: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV
Sbjct: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
Query: 181 ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV 240
ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV
Sbjct: 181 ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV 240
Query: 241 QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH 300
QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH
Sbjct: 241 QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH 300
Query: 301 FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL 360
FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL
Sbjct: 301 FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL 360
Query: 361 SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP 420
SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP
Sbjct: 361 SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP 420
Query: 421 HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL 478
HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL
Sbjct: 421 HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL 478
>gi|332160978|ref|YP_004297555.1| hypothetical protein YE105_C1356 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665208|gb|ADZ41852.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862134|emb|CBX72298.1| hypothetical protein YEW_AK02350 [Yersinia enterocolitica W22703]
Length = 430
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 12/277 (4%)
Query: 88 APYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDK 147
AP AG++L+ + ++R G + + PL GA+ A + ++ +G+D
Sbjct: 101 APEATVTTTAGQILNGLGDVMSRAVGGTVAAGPLG-GAVLAGGTEAIFANDEGLRKGLDP 159
Query: 148 ETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGY 207
TA + + + L P A ++++ VA+GA N+ G V+RG +++ LE GY
Sbjct: 160 LTAAGKGVLDGVSLGAGTLVPAAPFAKTLLSRVAAGAASNIAIGAVQRGTTAEWLEQRGY 219
Query: 208 PDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKS 267
DMAQ Y+++D +++ DG++GA FGG+ ++ D + +H +
Sbjct: 220 KDMAQQYKVWDATAMLADGVLGAAFGGLA-----HIGAAATPDSVDAALTARNAQHFRED 274
Query: 268 SSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADN---TLEDPHFKPHLP 324
++PG+ T + AH L D + RGE D + + D + +F
Sbjct: 275 TAPGIPTDIPSNIAHQRALETATDQINRGE--PVDVANIDGVFDAHFIARDGSNFAEQPA 332
Query: 325 EPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELS 361
E P P + + Q P + AE P+ + R+++
Sbjct: 333 EIAPRPVAESEATFQ-PEKTTAETATPEADPILRDIN 368
>gi|30387395|ref|NP_848224.1| hypothetical protein epsilon15p16 [Enterobacteria phage epsilon15]
gi|30266050|gb|AAO06079.1| 16 [Salmonella phage epsilon15]
Length = 634
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 44/233 (18%)
Query: 32 TGLGKEVINMPARSLDKLVAP----FR----------EETHD----QPNYYRG-SRTDPH 72
G K +I+ PA + D VAP FR ET+D Q RG + D
Sbjct: 57 VGFSKRLISDPAFTAD--VAPTVNIFRVMFPDADKALNETYDTIGKQLQDARGYVKPDAG 114
Query: 73 SVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSH 132
S GT A ++ GL P I G PT GA A+ S
Sbjct: 115 SQGTAAEVLYGLGQFVPAIGATIFGG------PT----------------VGAATAFSST 152
Query: 133 KAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGM 192
+S + +GVD+ TA LA ++++ + + + P A+ + ++ +ASG +N FG
Sbjct: 153 YEQSYQDFKGKGVDETTARNLATQQSLFNAAGMALPAAVGT-TLTTRIASGVAINTGFGG 211
Query: 193 VERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSL 245
+ R + LE+ GY +MA+ YR+FD ++++ D ++GA FGG H +N +
Sbjct: 212 LNRYSVGETLEEKGYTEMAKQYRVFDGQAMLVDAVLGAAFGGAHHLAARNADV 264
>gi|301028421|ref|ZP_07191667.1| conserved domain protein [Escherichia coli MS 196-1]
gi|299878532|gb|EFI86743.1| conserved domain protein [Escherichia coli MS 196-1]
Length = 686
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 22/219 (10%)
Query: 32 TGLGKEVINMPARSLDKLVAP----FREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSL 87
G K +I+ PA + D VAP FRE D + D + G L + + +
Sbjct: 57 VGFSKRLISDPAFTAD--VAPTVNIFREMFPDADK----TLNDTYDT-IGKQLQDARSYV 109
Query: 88 APYIAGAALAGKLLS----FIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIE 143
P +A ++L+ F+P T + G PL GA A+ S +S + +
Sbjct: 110 KPDAGSQGMAAEVLNELGKFVPAIGTTMFG-----GPLI-GAATAFSSTYEQSYQDFKGK 163
Query: 144 GVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLE 203
GVD+ TA LA ++++ + + P A+ + ++A +ASG +N FG + R LE
Sbjct: 164 GVDEATARNLATQQSLFNAVGMALPAAVGT-TLATRIASGVAINTGFGGLNRYSVGATLE 222
Query: 204 DHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQN 242
+ GY +MA+ YR+FD ++++ D ++G FGG+H N
Sbjct: 223 EKGYTEMAKQYRVFDGQAMLVDAVLGGVFGGVHHLTTHN 261
>gi|304398391|ref|ZP_07380265.1| hypothetical protein PanABDRAFT_3526 [Pantoea sp. aB]
gi|304354257|gb|EFM18630.1| hypothetical protein PanABDRAFT_3526 [Pantoea sp. aB]
Length = 625
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 27 DIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNY--YRGSR------TDPHSVGTGA 78
D +W+ G G + A L E P Y RG D +
Sbjct: 30 DPRWYAGSGSALFRGAAEGTIGLGQTLVETAKLSPTYSALRGDLPELDEIVDQNFSAVQK 89
Query: 79 HLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSI 138
L + S+ P +A ++L + T + P+A GA+ A+ S +
Sbjct: 90 SLNDARNSVKPAPNSQGMAAEILEGLGT-FAPAIAATAVAGPVAGGAV-AFGSSYESTRQ 147
Query: 139 HHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWS 198
+GV+++TA LA +A + + P + + +A + SG +N FG V R
Sbjct: 148 DFLAKGVNEDTAGTLALEQAGANALGMALPAGVGGR-LATRLLSGVGINTGFGAVNRFAL 206
Query: 199 SKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH 236
+ LE++GY ++A+ YR++D ++L+ DG++GA FGG+H
Sbjct: 207 GETLEENGYDELAKQYRVWDKQALLVDGVLGAAFGGVH 244
>gi|330007167|ref|ZP_08305909.1| hypothetical protein HMPREF9538_03598 [Klebsiella sp. MS 92-3]
gi|328535514|gb|EGF61974.1| hypothetical protein HMPREF9538_03598 [Klebsiella sp. MS 92-3]
Length = 632
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVL 202
+GVD++TA +A ++ + + P A+ + +A + SG +N FG + R + L
Sbjct: 163 KGVDEQTARTVAAEQSGFNAVGMGLPAAVGGR-LATRLLSGVGINAAFGGLNRFAVGETL 221
Query: 203 EDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH 236
ED+GY DMA+ YR+FD ++++ D ++GA FGG H
Sbjct: 222 EDNGYADMAKQYRVFDGQAILIDSVLGAAFGGAH 255
>gi|317120710|gb|ADV02532.1| hypothetical protein SC2_gp040 [Liberibacter phage SC2]
gi|317120771|gb|ADV02592.1| hypothetical protein SC2_gp040 [Candidatus Liberibacter asiaticus]
Length = 408
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIAS---QSIAKTVASGAVLNVPFGMVERGWSS 199
EGV ETA A++ T A G+++ +S+ +G NV FG+ ER
Sbjct: 149 EGVAHETAKI----GALITTGTTFAGGSVSGVIGKSLVSKAVTGGATNVAFGLGERQSIG 204
Query: 200 KVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSK-----QVQNMSLRLVNDLKEG 254
L+ G+ D+AQHYR D T+ +IGA G +H K ++ + + +K
Sbjct: 205 AYLDYKGHKDLAQHYREVDGIHTTTEFIIGAGLGALHGKGGKHPDIKPSDVDIAQVVKRD 264
Query: 255 ITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTL 314
I + + S+P + T+ + E H TL ++ + RGE + D + + + + +
Sbjct: 265 IDD-------IYHSAPAIATTSRSAELHAQTLEQAIEKMRRGEEINVDPKSIDLMTKDMI 317
Query: 315 EDP--HFKPHLPEPEPLPQYKEHSDRQKPSEPLA-EHPHPKRKEV---ERELSEIE 364
P F P L + L Q ++ +Q+ S+P A + P +V ER L+++E
Sbjct: 318 TKPEVEFSPEL--KKQLKQGEDFLAQQEVSKPKALKEQDPLSSQVPEYERRLTDLE 371
>gi|268589386|ref|ZP_06123607.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
gi|291315413|gb|EFE55866.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
Length = 594
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 45/266 (16%)
Query: 11 IRDNIKEWAQRPRVSPDIKW--------HTGLGKEVINMPARSL----DKLVAPFREETH 58
I + + Q P S D + +TGL +I P + L D +V+P E +
Sbjct: 11 INQQLDDAMQSPENSGDADFFDGAFTSTYTGLYSGLIAKPEQVLWGIADTVVSPIAREVN 70
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLL-SFIPTPLTRLAGLALQ 117
+Q + S A + + SL P A AG+++ S L G A+
Sbjct: 71 EQFDINDTSEQFIQEQRKNAE--KQVRSLTPDRATTGTAGQVMFSLFDIGGEALTG-AMI 127
Query: 118 SAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP-------GA 170
PL L + ++ + +GVDK TA A E + +L P G
Sbjct: 128 GGPLGGAMLVGGVQGFSDYE-KLRADGVDKNTAINKATGEGLFAGLGVLTPMTLGFKGGG 186
Query: 171 IASQSI-AKTVASGAVL--------------------NVPFGMVERGWSSKVLEDHGYPD 209
I ++SI A+ A G L N+ GM +RG++S++L++ GY
Sbjct: 187 ILAESIGAQFTARGGTLSSLAGTAARATPDIVYASGSNIAMGMAQRGFASQILKERGYNQ 246
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGM 235
+A Y ++D +++ DG++G FGGM
Sbjct: 247 LASQYDVYDKQAIAIDGVLGVAFGGM 272
>gi|315122889|ref|YP_004063378.1| hypothetical protein CKC_05725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496291|gb|ADR52890.1| hypothetical protein CKC_05725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 363
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVL 202
EG D TA + ++ + L P + +AS V N+ ++R +L
Sbjct: 133 EGQDSSTATKGGMKTGVISGAGALIPAGFGVSVVKSAIASAGV-NLGLSKLDRMGDYAIL 191
Query: 203 EDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLV--------NDLKEG 254
+ +GY ++A+H D S+ TD ++G FGG+H+K + + +LV D+ G
Sbjct: 192 KANGYDELAEHASEMDSISIATDIVLGMAFGGLHAKNARR-NKKLVGMKPTPSEGDIATG 250
Query: 255 ITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTL 314
L + + P T+ +++E H +A +LV GE D +KL+ + ++
Sbjct: 251 AKNELMTSRTLNDAIP---TTNESFETHMSAIAEAEHALVNGEKFGLDSQKLEALERGSI 307
Query: 315 EDPHFK 320
+ P +
Sbjct: 308 KKPDIE 313
>gi|315121927|ref|YP_004062416.1| hypothetical protein CKC_00885 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495329|gb|ADR51928.1| hypothetical protein CKC_00885 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 326
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVL 202
EG D TA + ++ + L P + +AS V N+ ++R +L
Sbjct: 96 EGQDSSTATKGGMKTGVISGAGALIPAGFGVSVVKSAIASAGV-NLGLSKLDRMGDYAIL 154
Query: 203 EDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV-QNMSLRLV------NDLKEGI 255
+ +GY ++A+H D S+ TD ++G FGG+H+K +N L + D+ G
Sbjct: 155 KANGYDELAEHASEMDSISIATDIVLGMAFGGLHAKNARRNKKLAGMKPTPSEGDIATGA 214
Query: 256 TERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLE 315
L + + P T+ +++E H +A +LV GE D +KL+ + +++
Sbjct: 215 KNELMTSRTLNDAVP---TTNESFETHMSAIAEAEHALVNGEKFGLDSQKLEALERGSIK 271
Query: 316 DP 317
P
Sbjct: 272 KP 273
>gi|309702800|emb|CBJ02131.1| hypothetical phage protein [Escherichia coli ETEC H10407]
Length = 600
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 46/158 (29%)
Query: 78 AHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESS 137
A LV+G+T AGA + IP L AG AL A ++ A L+ ES+
Sbjct: 163 AGLVQGVT------AGAG------TLIPMSLGLRAGGAL------AESVGAQLARTGESA 204
Query: 138 IHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGW 197
+ + + T+ AP +A A N+ FGM +RG
Sbjct: 205 VRN------------------VAATAVRAAP----------DIAYAAGTNIAFGMAQRGL 236
Query: 198 SSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
++K L D GY +MA Y +FD +S+ D ++G FGG+
Sbjct: 237 TAKTLRDGGYNEMANQYDVFDRQSIAIDAVLGVAFGGV 274
>gi|215487809|ref|YP_002330240.1| hypothetical protein E2348C_2742 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265881|emb|CAS10290.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
Length = 600
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 46/158 (29%)
Query: 78 AHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESS 137
A LV+G+T AGA + IP L AG AL A ++ A L+ ES+
Sbjct: 163 AGLVQGVT------AGAG------TLIPMSLGLRAGGAL------AESVGAQLARTGESA 204
Query: 138 IHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGW 197
+ + + T+ AP +A A N+ FGM +RG
Sbjct: 205 VRN------------------VAATAVRAAP----------DIAYAAGTNIAFGMAQRGL 236
Query: 198 SSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
++K L D GY +MA Y +FD +S+ D ++G FGG+
Sbjct: 237 TAKTLRDGGYNEMAAQYDVFDRQSIAIDAVLGVAFGGV 274
>gi|327252172|gb|EGE63844.1| hypothetical protein ECSTEC7V_3019 [Escherichia coli STEC_7v]
Length = 600
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|323948673|gb|EGB44578.1| hypothetical protein ERKG_04896 [Escherichia coli H252]
Length = 600
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|324008548|gb|EGB77767.1| hypothetical protein HMPREF9532_01735 [Escherichia coli MS 57-2]
Length = 600
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|89152440|ref|YP_512273.1| hypothetical protein PhiV10p19 [Escherichia phage phiV10]
gi|74055463|gb|AAZ95912.1| hypothetical protein PhiV10p19 [Escherichia phage phiV10]
Length = 600
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|218700978|ref|YP_002408607.1| hypothetical protein ECIAI39_2668 [Escherichia coli IAI39]
gi|218370964|emb|CAR18791.1| conserved hypothetical protein from phage origin [Escherichia coli
IAI39]
Length = 600
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|300898439|ref|ZP_07116780.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300357906|gb|EFJ73776.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 600
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|332344342|gb|AEE57676.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 600
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|298381706|ref|ZP_06991305.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|298279148|gb|EFI20662.1| conserved hypothetical protein [Escherichia coli FVEC1302]
Length = 600
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|323156121|gb|EFZ42280.1| hypothetical protein ECEPECA14_1896 [Escherichia coli EPECa14]
Length = 600
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|117624700|ref|YP_853613.1| hypothetical protein APECO1_4053 [Escherichia coli APEC O1]
gi|115513824|gb|ABJ01899.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 600
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|298485994|ref|ZP_07004068.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159471|gb|EFI00518.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 448
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVL 202
EG+D+ TA L E +V + + P A + + A NV GM RG ++ +L
Sbjct: 161 EGIDENTATLLGLSEGVVTGAGAILPAAQFVKPVLGDAAIAIGANVGLGMAHRGTAAALL 220
Query: 203 EDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYK 262
+ +GY A YR D ++ TD ++GA F G+ +M + + +TER +
Sbjct: 221 DSNGYAAQAAQYRAMDGTAIATDAILGAAFFGIGRS---SMRRPTTDQVDAALTER-NAQ 276
Query: 263 HGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGE 297
H ++PGL + AH D L ++ + RGE
Sbjct: 277 HADIDTAPGLPVDPRSAIAHQDALRAAIEQINRGE 311
>gi|331648164|ref|ZP_08349254.1| hypothetical protein ECIG_04090 [Escherichia coli M605]
gi|331043024|gb|EGI15164.1| hypothetical protein ECIG_04090 [Escherichia coli M605]
Length = 600
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+A A N+ FGM +R ++K L D GY +MA Y + D +++ D ++G FGG+
Sbjct: 219 IAYAAGTNIAFGMAQRVLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGV 274
>gi|85059172|ref|YP_454874.1| hypothetical protein SG1194 [Sodalis glossinidius str. 'morsitans']
gi|84779692|dbj|BAE74469.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 490
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 187 NVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNM 243
N+ GM +RG S++ L GY DMA+ Y + D ++L TD ++G FGG+ + + +++
Sbjct: 226 NIAMGMAQRGLSAETLRRGGYEDMARQYDVMDAQALATDAVLGVAFGGLGRFINSRGEDV 285
Query: 244 SLRLVN--DLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGE 297
+R V+ ++ +T V + +PG+ S + AH + + ++ GE
Sbjct: 286 PVRRVSPEEIDAALTSSSHVNFEV-TVAPGVPVSVLSRNAHAQAMNKAMTDVLAGE 340
>gi|320175033|gb|EFW50146.1| 16 [Shigella dysenteriae CDC 74-1112]
Length = 600
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITD 225
+A A N+ FGM +RG ++K L D GY +MA Y + D +++ D
Sbjct: 219 IAYAAGTNIAFGMAQRGLTAKTLRDGGYSEMANQYDVLDRQAIAID 264
>gi|85059663|ref|YP_455365.1| hypothetical protein SG1685 [Sodalis glossinidius str. 'morsitans']
gi|84780183|dbj|BAE74960.1| hypothetical protein [Sodalis glossinidius str. 'morsitans']
Length = 490
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 187 NVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNM 243
N+ GM +RG S++ L GY DMA+ Y + ++L TD ++G GG+ + + +++
Sbjct: 226 NIAMGMAQRGLSAETLRRGGYEDMARQYDVMASQALATDAVLGLAPGGLGRFINSRGEDV 285
Query: 244 SLRLVN--DLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGE 297
+R V+ ++ +T V + +PG+ S + AH + + ++ GE
Sbjct: 286 PVRRVSPEEIDAALTSSSHVNFEV-TVAPGVPVSVLSCNAHAQAMNKAMAGVLAGE 340
>gi|319793416|ref|YP_004155056.1| phage-like protein [Variovorax paradoxus EPS]
gi|315595879|gb|ADU36945.1| phage-like protein [Variovorax paradoxus EPS]
Length = 937
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIASQSI-------AKTVASGAVLNVPFGMVER 195
+GV TA A+ + AP + Q+I A+ +A GA +V G+ ER
Sbjct: 144 QGVAPGTATAVGAVSGAATYVGVKAPITLGQQAIGQGGRAMAQNLAYGATASVAGGVAER 203
Query: 196 GWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGG----MHSKQVQNMSLRLVNDL 251
G+S +L+ GY + A +D +L + +GA F G +H++ + + D
Sbjct: 204 GFSRDLLKAAGYGEQAAPLEPYDKTALAAEATLGALFSGGAAALHAR--STVRGQAATDA 261
Query: 252 KEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIAD 311
+T H + ++PG T A AH L+ ++ ++R E + ++
Sbjct: 262 ALTVTT---VDHAQRGTAPGTPTDARAASAHASALSTAIEQVLRNEPANVGEQ------- 311
Query: 312 NTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLA 346
+ D F +P PE + + H P P A
Sbjct: 312 --MADTAFVRPVPSPEIRAELQAHVADLLPVGPAA 344
>gi|254251752|ref|ZP_04945070.1| Soluble lytic murein transglycosylase [Burkholderia dolosa AUO158]
gi|124894361|gb|EAY68241.1| Soluble lytic murein transglycosylase [Burkholderia dolosa AUO158]
Length = 764
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 25/171 (14%)
Query: 68 RTDPHSVGTGAHLVEGLTS-LAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGAL 126
R DP + T +V+G S L + A L G + AG A+ A + G
Sbjct: 117 RPDPQNTTTTDQIVQGAVSGLVQIVPAAVLGGPV-----------AGAAVGGASIGLG-- 163
Query: 127 YAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVL 186
S + EGVD T A+ E + + + P +IA+T+ AV
Sbjct: 164 ---------RSEELKREGVDVGTRTAVGAVEGALGAAGAVLPAG--GSTIARTLGLVAVG 212
Query: 187 NVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS 237
+ + +L++ GY +A D +L L+ FFGG+H+
Sbjct: 213 GPGMAIGQSTAEKAILKNAGYDHLADQIDPLDPTNLAASTLMAGFFGGLHA 263
>gi|222147647|ref|YP_002548604.1| Two-component sensor histidine kinase protein [Agrobacterium vitis
S4]
gi|221734635|gb|ACM35598.1| Two-component sensor histidine kinase protein [Agrobacterium vitis
S4]
Length = 445
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 140 HQIEGVDKETADALAW----REAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVER 195
H++ G +E LA R+ + + P ++++A+ + G +L V
Sbjct: 77 HRVSGTVQEFPSGLALDMPPRQVSIVRTDQTPPQQQRARAVARRLPDGNILFV------- 129
Query: 196 GWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS-KQVQNMSLRLVNDLKEG 254
GWS+ ++ M + +F + ++T GL A F G+++ ++V M +R+ +
Sbjct: 130 GWSTA--DNEQAASMVERGLLFGLVPVLTFGLAAAVFFGLNAHRRVNEMQIRIAQIVAGD 187
Query: 255 ITERLPYKH 263
+ +RLPY++
Sbjct: 188 LKQRLPYRN 196
>gi|296123820|ref|YP_003631598.1| hypothetical protein Plim_3586 [Planctomyces limnophilus DSM 3776]
gi|296016160|gb|ADG69399.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
DSM 3776]
Length = 1077
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 84 LTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIE 143
L SL + A AA+AGK LS P R ALQ A +A KAE+ I Q E
Sbjct: 529 LFSLGDFEASAAVAGKYLSMFPQATQRRRAYALQGLAYAKAQQWA----KAEAVI-KQFE 583
Query: 144 GV---DKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSK 200
D A AL +A V +A P A+A K +A+G N PF GWS
Sbjct: 584 AEFPGDPAVAAALM-DQAEVAEAAKQWPVALADFEKLKRLAAGTT-NEPFAWRGTGWSRF 641
Query: 201 VLEDH 205
L D+
Sbjct: 642 RLGDY 646
>gi|297203976|ref|ZP_06921373.1| O-antigen polymerase [Streptomyces sviceus ATCC 29083]
gi|297148540|gb|EDY57206.2| O-antigen polymerase [Streptomyces sviceus ATCC 29083]
Length = 479
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 74 VGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHK 133
VGT A+ V L L Y+A L G++L P P TR +++ L L AY++
Sbjct: 63 VGTPAN-VFALLGLLWYLA-TWLGGRIL---PAPGTRFVRVSM--CVLGTAVLMAYIADA 115
Query: 134 AESSIHHQIEGVDKETADALAWREAIVHTSA 164
S H ++ G D+ L W +V TSA
Sbjct: 116 MRESSHQEVLGADRGLIGYLVWVSLVVLTSA 146
Searching..................................................done
Results from round 2
>gi|254781203|ref|YP_003065616.1| hypothetical protein CLIBASIA_05550 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040880|gb|ACT57676.1| hypothetical protein CLIBASIA_05550 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120669|gb|ADV02492.1| hypothetical protein SC1_gp035 [Liberibacter phage SC1]
gi|317120813|gb|ADV02634.1| hypothetical protein SC1_gp035 [Candidatus Liberibacter asiaticus]
Length = 478
Score = 742 bits (1915), Expect = 0.0, Method: Composition-based stats.
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ 60
MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ
Sbjct: 1 MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ 60
Query: 61 PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP 120
PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP
Sbjct: 61 PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP 120
Query: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV
Sbjct: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
Query: 181 ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV 240
ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV
Sbjct: 181 ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV 240
Query: 241 QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH 300
QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH
Sbjct: 241 QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH 300
Query: 301 FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL 360
FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL
Sbjct: 301 FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL 360
Query: 361 SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP 420
SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP
Sbjct: 361 SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP 420
Query: 421 HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL 478
HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL
Sbjct: 421 HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL 478
>gi|332160978|ref|YP_004297555.1| hypothetical protein YE105_C1356 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665208|gb|ADZ41852.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862134|emb|CBX72298.1| hypothetical protein YEW_AK02350 [Yersinia enterocolitica W22703]
Length = 430
Score = 282 bits (720), Expect = 1e-73, Method: Composition-based stats.
Identities = 74/330 (22%), Positives = 141/330 (42%), Gaps = 13/330 (3%)
Query: 39 INMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSL-APYIAGAALA 97
+N A + + V+ + G+ + G+ + AP A
Sbjct: 51 LNKVAFAASQGVSTLLSPVAQAIDRATGTNANAFFDGSWTEGFRKTAEIQAPEATVTTTA 110
Query: 98 GKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWRE 157
G++L+ + ++R G + + PL GA+ A + ++ +G+D TA +
Sbjct: 111 GQILNGLGDVMSRAVGGTVAAGPLG-GAVLAGGTEAIFANDEGLRKGLDPLTAAGKGVLD 169
Query: 158 AIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIF 217
+ + L P A ++++ VA+GA N+ G V+RG +++ LE GY DMAQ Y+++
Sbjct: 170 GVSLGAGTLVPAAPFAKTLLSRVAAGAASNIAIGAVQRGTTAEWLEQRGYKDMAQQYKVW 229
Query: 218 DMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFD 277
D +++ DG++GA FGG+ + D + +H + ++PG+ T
Sbjct: 230 DATAMLADGVLGAAFGGLAH-----IGAAATPDSVDAALTARNAQHFREDTAPGIPTDIP 284
Query: 278 AYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADN---TLEDPHFKPHLPEPEPLPQYKE 334
+ AH L D + RGE D + + D + +F E P P +
Sbjct: 285 SNIAHQRALETATDQINRGE--PVDVANIDGVFDAHFIARDGSNFAEQPAEIAPRPVAES 342
Query: 335 HSDRQKPSEPLAEHPHPKRKEVERELSEIE 364
+ Q P + AE P+ + R+++ +
Sbjct: 343 EATFQ-PEKTTAETATPEADPILRDINNAD 371
>gi|268589386|ref|ZP_06123607.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
gi|291315413|gb|EFE55866.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
Length = 594
Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats.
Identities = 76/369 (20%), Positives = 140/369 (37%), Gaps = 58/369 (15%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSPDIKW--------HTGLGKEVINMPARSL----DK 48
M + ++ I + + Q P S D + +TGL +I P + L D
Sbjct: 1 MSYFGLNPTRINQQLDDAMQSPENSGDADFFDGAFTSTYTGLYSGLIAKPEQVLWGIADT 60
Query: 49 LVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPL 108
+V+P E ++Q + S A + + SL P A AG+++ +
Sbjct: 61 VVSPIAREVNEQFDINDTSEQFIQEQRKNAE--KQVRSLTPDRATTGTAGQVMFSLFDIG 118
Query: 109 TRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP 168
A+ PL L + ++ + +GVDK TA A E + +L P
Sbjct: 119 GEALTGAMIGGPLGGAMLVGGVQGFSDYE-KLRADGVDKNTAINKATGEGLFAGLGVLTP 177
Query: 169 -------GAIASQSI---------------------AKTVASGAVLNVPFGMVERGWSSK 200
G I ++SI + + N+ GM +RG++S+
Sbjct: 178 MTLGFKGGGILAESIGAQFTARGGTLSSLAGTAARATPDIVYASGSNIAMGMAQRGFASQ 237
Query: 201 VLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRL--VNDLKEGI 255
+L++ GY +A Y ++D +++ DG++G FGGM + + +N+ L + +
Sbjct: 238 ILKERGYNQLASQYDVYDKQAIAIDGVLGVAFGGMGRYINSRGENVPLPEFDTPHVDAAL 297
Query: 256 TERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLE 315
T H PG+ + + + H + ++ L +G D + L+
Sbjct: 298 TANQQL-HLEADLPPGIPINAMSLDGHLAAMNKAMNDLSQGN--PVDIGSI-------LD 347
Query: 316 DPHFKPHLP 324
F H P
Sbjct: 348 GAEFLVHRP 356
>gi|317120710|gb|ADV02532.1| hypothetical protein SC2_gp040 [Liberibacter phage SC2]
gi|317120771|gb|ADV02592.1| hypothetical protein SC2_gp040 [Candidatus Liberibacter asiaticus]
Length = 408
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 85/378 (22%), Positives = 148/378 (39%), Gaps = 38/378 (10%)
Query: 9 EDIRDNIKEWAQR------PRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPN 62
E + IK P PD + T + +V ++P+ + E D
Sbjct: 10 EKLLQQIKHAMDAGFYRYDPPKKPDYGFWTNITNDVASIPSEFIKGT----AEGQVDVIT 65
Query: 63 YYRGSRTD--PHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLA--GLALQS 118
S PH+ T + A G LS T + A + L +
Sbjct: 66 SISTSLGYYTPHNKITSKPWYNVAEDVGVMGGVAHGIGHFLSAFGTGFSLFAINPVTLPA 125
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIAS---QS 175
+P G A + + EGV ETA A ++ T A G+++ +S
Sbjct: 126 SPFI-GLATASSASGTRRYKELRDEGVAHETAKIGA----LITTGTTFAGGSVSGVIGKS 180
Query: 176 IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM 235
+ +G NV FG+ ER L+ G+ D+AQHYR D T+ +IGA G +
Sbjct: 181 LVSKAVTGGATNVAFGLGERQSIGAYLDYKGHKDLAQHYREVDGIHTTTEFIIGAGLGAL 240
Query: 236 HSK-----QVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGV 290
H K ++ + + +K I + + S+P + T+ + E H TL +
Sbjct: 241 HGKGGKHPDIKPSDVDIAQVVKRDIDD-------IYHSAPAIATTSRSAELHAQTLEQAI 293
Query: 291 DSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLA-EHP 349
+ + RGE + D + + + + + P + + L Q ++ +Q+ S+P A +
Sbjct: 294 EKMRRGEEINVDPKSIDLMTKDMITKPEVEFSPELKKQLKQGEDFLAQQEVSKPKALKEQ 353
Query: 350 HPKRKEV---ERELSEIE 364
P +V ER L+++E
Sbjct: 354 DPLSSQVPEYERRLTDLE 371
>gi|301028421|ref|ZP_07191667.1| conserved domain protein [Escherichia coli MS 196-1]
gi|299878532|gb|EFI86743.1| conserved domain protein [Escherichia coli MS 196-1]
Length = 686
Score = 219 bits (558), Expect = 8e-55, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 32 TGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYI 91
G K +I+ PA + D VAP + + D + G L + + + P
Sbjct: 57 VGFSKRLISDPAFTAD--VAPTVNIFREMFPDADKTLNDTYDT-IGKQLQDARSYVKPDA 113
Query: 92 AGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETAD 151
+A ++L+ + G + PL GA A+ S +S + +GVD+ TA
Sbjct: 114 GSQGMAAEVLNELG-KFVPAIGTTMFGGPLI-GAATAFSSTYEQSYQDFKGKGVDEATAR 171
Query: 152 ALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA 211
LA ++++ + + P A+ + ++A +ASG +N FG + R LE+ GY +MA
Sbjct: 172 NLATQQSLFNAVGMALPAAVGT-TLATRIASGVAINTGFGGLNRYSVGATLEEKGYTEMA 230
Query: 212 QHYRIFDMESLITDGLIGAFFGGMHSKQVQN 242
+ YR+FD ++++ D ++G FGG+H N
Sbjct: 231 KQYRVFDGQAMLVDAVLGGVFGGVHHLTTHN 261
Score = 53.8 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 13/147 (8%)
Query: 222 LITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEA 281
+ + + FG ++++ + + L EG+ H SSP LHTS ++ +
Sbjct: 473 MKLEAAVEKVFGIRARERIKPSDIDAAHILNEGL-------HYDIESSPVLHTSNESINS 525
Query: 282 HTDTLAHGVDSLVRGEYPHFD--QEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQ 339
H D + L G+ + L + + D ++ E + ++E+ R
Sbjct: 526 HVDAMDEAYRQLNDGQPVNVGGMARGLDGPLRSDISDT-YQEQYHEIQ--KVFEENGVRY 582
Query: 340 KP-SEPLAEHPHPKRKEVERELSEIEG 365
+ SEP++E P P+ + E G
Sbjct: 583 ETSSEPISESPVPRAESAFSSAGEHRG 609
>gi|304398391|ref|ZP_07380265.1| hypothetical protein PanABDRAFT_3526 [Pantoea sp. aB]
gi|304354257|gb|EFM18630.1| hypothetical protein PanABDRAFT_3526 [Pantoea sp. aB]
Length = 625
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/413 (20%), Positives = 156/413 (37%), Gaps = 38/413 (9%)
Query: 16 KEWAQRPRVSPD---IKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNY--YRGSRT- 69
+ A + PD +W+ G G + A L E P Y RG
Sbjct: 16 DDQAASKQAQPDDYDPRWYAGSGSALFRGAAEGTIGLGQTLVETAKLSPTYSALRGDLPE 75
Query: 70 -----DPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAG 124
D + L + S+ P +A ++L + T + P+A G
Sbjct: 76 LDEIVDQNFSAVQKSLNDARNSVKPAPNSQGMAAEILEGLGT-FAPAIAATAVAGPVAGG 134
Query: 125 ALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGA 184
A+ A+ S + +GV+++TA LA +A + + P + + +A + SG
Sbjct: 135 AV-AFGSSYESTRQDFLAKGVNEDTAGTLALEQAGANALGMALPAGVGGR-LATRLLSGV 192
Query: 185 VLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMS 244
+N FG V R + LE++GY ++A+ YR++D ++L+ DG++GA FGG+H
Sbjct: 193 GINTGFGAVNRFALGETLEENGYDELAKQYRVWDKQALLVDGVLGAAFGGVHHLTSPRAD 252
Query: 245 LRLVNDL-----KEGITERLPYKHGVKSSSPGL------------HTSFDAYEAHTDTLA 287
L + + +T+ + + ++D+ A LA
Sbjct: 253 TPLADPAPVSAGESAVTDAPAALRADADPAQTVVAEDSPLPAGEPAVTYDSRIAEMQDLA 312
Query: 288 HGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAE 347
V + RG+ QE + + + + PL + + +
Sbjct: 313 GQV--ISRGDRKALAQEVHDLQYQH--DQATTQLQQVKNTPLSGSGKALAQARAQRTAQV 368
Query: 348 HPHPKRKEVERELSEIEGAK-KESSARKFFDEGSPDHSPFKGERNQKLDPMRG 399
+ R + +E + GA+ +SS F E D S + E+ + MRG
Sbjct: 369 NELDMRIGLLKEQIDQRGARLADSSPGGRFYEARSDLS--RIEQGLIPESMRG 419
Score = 39.1 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 60/376 (15%), Positives = 112/376 (29%), Gaps = 42/376 (11%)
Query: 37 EVINMPARSLDK-LVAPFREETHDQPNYYRGSRTDPHSVGTGAH-LVEGLTSLAPYIAGA 94
V + A +D L A F H DP V G + + +L A
Sbjct: 223 RVWDKQALLVDGVLGAAFGGVHHLTSPRADTPLADPAPVSAGESAVTDAPAALRADADPA 282
Query: 95 ALAGKLLSFIPTPLTRLAGLALQS--APLAAGALYAYLSHKAESSIHHQIEGVDKETADA 152
S +P + + + LA + +H D+ T
Sbjct: 283 QTVVAEDSPLPAGEPAVTYDSRIAEMQDLAGQVISRGDRKALAQEVHDLQYQHDQATTQL 342
Query: 153 LAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQ 212
+ + S +Q+ A+ A L++ G+++ + +
Sbjct: 343 QQVKNTPLSGSGKAL-----AQARAQRTAQVNELDMRIGLLKEQIDQRGARLADSSPGGR 397
Query: 213 HYRIFDMESLITDGLIGAFFGGM-HSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPG 271
Y S I GLI G+ Q++ + + + EG+ + SSP
Sbjct: 398 FYEARSDLSRIEQGLIPESMRGLVPEAQIKPSDVDAAHVMNEGL-------YYDLESSPV 450
Query: 272 LHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQE--------KLQTIADNTLEDPHFK--- 320
+H+ ++ +H + L+ GE + + + IA +
Sbjct: 451 VHSGNESLNSHVAAMDQASRQLLSGEPVNVSAQIRGLDGIARPDAIATGEAQRAELSAAY 510
Query: 321 ---------PHLPEPE--PLPQYKEHSDRQ--KPSEPLAEHPHPKRKE-VERELSEIEGA 366
P EP P+ + + + +PS P P E + ++ A
Sbjct: 511 RENGIAETVPQNAEPSIPPVREGSAFAGGRSAEPSSPEQISTDPVTGESISSNSYDLMAA 570
Query: 367 KKESSARKFFDEGSPD 382
+ S A PD
Sbjct: 571 RDMSQANADIMIAHPD 586
>gi|30387395|ref|NP_848224.1| hypothetical protein epsilon15p16 [Enterobacteria phage epsilon15]
gi|30266050|gb|AAO06079.1| 16 [Salmonella phage epsilon15]
Length = 634
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 6/248 (2%)
Query: 32 TGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYI 91
G K +I+ PA + D VAP + + + G L + + P
Sbjct: 57 VGFSKRLISDPAFTAD--VAPTVNIFRVMFPDADKALNETYDT-IGKQLQDARGYVKPDA 113
Query: 92 AGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETAD 151
A ++L + G + P GA A+ S +S + +GVD+ TA
Sbjct: 114 GSQGTAAEVLYGLG-QFVPAIGATIFGGP-TVGAATAFSSTYEQSYQDFKGKGVDETTAR 171
Query: 152 ALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA 211
LA ++++ + + + P A+ + ++ +ASG +N FG + R + LE+ GY +MA
Sbjct: 172 NLATQQSLFNAAGMALPAAVGT-TLTTRIASGVAINTGFGGLNRYSVGETLEEKGYTEMA 230
Query: 212 QHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPG 271
+ YR+FD ++++ D ++GA FGG H +N + D + I S P
Sbjct: 231 KQYRVFDGQAMLVDAVLGAAFGGAHHLAARNADVPPPPDSEAPIPAAEVQSVPDNSPQPQ 290
Query: 272 LHTSFDAY 279
++
Sbjct: 291 AESAPQPA 298
>gi|315122889|ref|YP_004063378.1| hypothetical protein CKC_05725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496291|gb|ADR52890.1| hypothetical protein CKC_05725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 363
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 48/250 (19%), Positives = 97/250 (38%), Gaps = 18/250 (7%)
Query: 85 TSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGA-------LYAYLSHKAESS 137
+L G++ + ++ A+ + L L+ +
Sbjct: 68 NALTVDPEETGAIGQIGHSLLHSVSAFGIGAMAGGSIGGPLGALAGGFLSVALAEGRRAF 127
Query: 138 IHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGW 197
+ + EG D TA + ++ + L P + +AS V N+ ++R
Sbjct: 128 ENARDEGQDSSTATKGGMKTGVISGAGALIPAGFGVSVVKSAIASAGV-NLGLSKLDRMG 186
Query: 198 SSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQN-------MSLRLVND 250
+L+ +GY ++A+H D S+ TD ++G FGG+H+K + D
Sbjct: 187 DYAILKANGYDELAEHASEMDSISIATDIVLGMAFGGLHAKNARRNKKLVGMKPTPSEGD 246
Query: 251 LKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIA 310
+ G L + + P T+ +++E H +A +LV GE D +KL+ +
Sbjct: 247 IATGAKNELMTSRTLNDAIP---TTNESFETHMSAIAEAEHALVNGEKFGLDSQKLEALE 303
Query: 311 DNTLEDPHFK 320
+++ P +
Sbjct: 304 RGSIKKPDIE 313
>gi|315121927|ref|YP_004062416.1| hypothetical protein CKC_00885 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495329|gb|ADR51928.1| hypothetical protein CKC_00885 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 326
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 48/250 (19%), Positives = 97/250 (38%), Gaps = 18/250 (7%)
Query: 85 TSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGA-------LYAYLSHKAESS 137
+L G++ + ++ A+ + L L+ +
Sbjct: 31 NALTVDPEETGAIGQIGHSLLHSVSAFGIGAMTGGSIGGPLGALAGGFLSVALAEGRRAF 90
Query: 138 IHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGW 197
+ + EG D TA + ++ + L P + +AS V N+ ++R
Sbjct: 91 ENARDEGQDSSTATKGGMKTGVISGAGALIPAGFGVSVVKSAIASAGV-NLGLSKLDRMG 149
Query: 198 SSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQN-------MSLRLVND 250
+L+ +GY ++A+H D S+ TD ++G FGG+H+K + D
Sbjct: 150 DYAILKANGYDELAEHASEMDSISIATDIVLGMAFGGLHAKNARRNKKLAGMKPTPSEGD 209
Query: 251 LKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIA 310
+ G L + + P T+ +++E H +A +LV GE D +KL+ +
Sbjct: 210 IATGAKNELMTSRTLNDAVP---TTNESFETHMSAIAEAEHALVNGEKFGLDSQKLEALE 266
Query: 311 DNTLEDPHFK 320
+++ P +
Sbjct: 267 RGSIKKPDIE 276
>gi|298381706|ref|ZP_06991305.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|298279148|gb|EFI20662.1| conserved hypothetical protein [Escherichia coli FVEC1302]
Length = 600
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 65/371 (17%), Positives = 127/371 (34%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGSALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDVDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|218700978|ref|YP_002408607.1| hypothetical protein ECIAI39_2668 [Escherichia coli IAI39]
gi|218370964|emb|CAR18791.1| conserved hypothetical protein from phage origin [Escherichia coli
IAI39]
Length = 600
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 65/371 (17%), Positives = 127/371 (34%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSINDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDIDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGH 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|309702800|emb|CBJ02131.1| hypothetical phage protein [Escherichia coli ETEC H10407]
Length = 600
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 74/403 (18%), Positives = 134/403 (33%), Gaps = 55/403 (13%)
Query: 3 FNAVSDEDIRDNIKEWAQRP----------RVSPDIKWHTGLGKEVINMPAR----SLDK 48
NAV+ + E A P S +GL ++ P + +DK
Sbjct: 6 LNAVNQ---NQQLDEAASNPAGFNTDVGFFDNSGTAA-VSGLYSGLVAKPDQLLWAGMDK 61
Query: 49 LVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPL 108
+V+P + ++ + S A + + L P A AG++L +
Sbjct: 62 IVSPIAKFVNENTSINDTSAEYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLHGLFDMG 119
Query: 109 TRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP 168
+ L S P A L +E +GVD TA + + + L P
Sbjct: 120 GQAVVGTLLSGPAGGAAAVTALQGFSEFE-RLTAQGVDFRTAQEAGLVQGVTAGAGTLIP 178
Query: 169 GAIASQS-----------------------------IAKTVASGAVLNVPFGMVERGWSS 199
++ ++ A +A A N+ FGM +RG ++
Sbjct: 179 MSLGLRAGGALAESVGAQLARTGESAVRNVAATAVRAAPDIAYAAGTNIAFGMAQRGLTA 238
Query: 200 KVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDL----KEGI 255
K L D GY +MA Y +FD +S+ D ++G FGG+ + +
Sbjct: 239 KTLRDGGYNEMANQYDVFDRQSIAIDAVLGVAFGGVGRFLNARGESAAAPEFSPAEVDAA 298
Query: 256 TERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLE 315
H +PG+ + + +AH L ++ + +G +
Sbjct: 299 LAANASHHAEIDVAPGVPVNVLSRDAHIQALQKAMNDVSQGRAVDVTSIAEPASFSDIPG 358
Query: 316 DPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVER 358
+ + E L + +E S + E + +VE+
Sbjct: 359 RRNLISQAID-ETLYRTEEGSTQVAVDTRALEQQAAQALDVEQ 400
>gi|300898439|ref|ZP_07116780.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300357906|gb|EFJ73776.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 600
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 65/371 (17%), Positives = 127/371 (34%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPISLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDVDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|323948673|gb|EGB44578.1| hypothetical protein ERKG_04896 [Escherichia coli H252]
Length = 600
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 65/371 (17%), Positives = 127/371 (34%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSINDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDIDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|324008548|gb|EGB77767.1| hypothetical protein HMPREF9532_01735 [Escherichia coli MS 57-2]
Length = 600
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 65/371 (17%), Positives = 127/371 (34%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSINDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDIDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|332344342|gb|AEE57676.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 600
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 66/371 (17%), Positives = 127/371 (34%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDVDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + G D + +E F L
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSEGR--PVDVASI-------VESASFSEILGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|117624700|ref|YP_853613.1| hypothetical protein APECO1_4053 [Escherichia coli APEC O1]
gi|115513824|gb|ABJ01899.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 600
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 67/371 (18%), Positives = 128/371 (34%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSINDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGVFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP-------GAI 171
P+ A L +E +GVD TA + I + L P G
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGALIPMSLWLRAGGA 188
Query: 172 ASQSIAK----------------------TVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
++ +A +A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDIDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|89152440|ref|YP_512273.1| hypothetical protein PhiV10p19 [Escherichia phage phiV10]
gi|74055463|gb|AAZ95912.1| hypothetical protein PhiV10p19 [Escherichia phage phiV10]
Length = 600
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 66/371 (17%), Positives = 130/371 (35%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRP-RVSPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAALNPVGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQLVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A +AG++L + +
Sbjct: 72 ENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGIAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDVDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ ++ + +H L + + +G D + +E F L
Sbjct: 309 IDIAPGVPSNVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEILGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|323156121|gb|EFZ42280.1| hypothetical protein ECEPECA14_1896 [Escherichia coli EPECa14]
Length = 600
Score = 187 bits (473), Expect = 5e-45, Method: Composition-based stats.
Identities = 66/371 (17%), Positives = 126/371 (33%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPVGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVIGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + + S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGEATSTPNFSPVDVDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
SPG+ + + +H L + + +G D + +E F
Sbjct: 309 IDISPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|331648164|ref|ZP_08349254.1| hypothetical protein ECIG_04090 [Escherichia coli M605]
gi|331043024|gb|EGI15164.1| hypothetical protein ECIG_04090 [Escherichia coli M605]
Length = 600
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 64/371 (17%), Positives = 125/371 (33%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGSAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +R ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRVLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + + S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGEPTSAPNFSPVDIDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|85059172|ref|YP_454874.1| hypothetical protein SG1194 [Sodalis glossinidius str. 'morsitans']
gi|84779692|dbj|BAE74469.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 490
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 73/396 (18%), Positives = 132/396 (33%), Gaps = 60/396 (15%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSP---DIKWHTGLGKEVINMPARS-----------L 46
M + S + ++ P + D + G G + L
Sbjct: 1 MSYFGFSPTQQNKALAYASEHPIGTGTLQDAAFFDGAGTALFEGLWSGVRQADQVGWAAL 60
Query: 47 DKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPT 106
D +++P E + S A + + L P AG++L +
Sbjct: 61 DTVMSPVAEAVSETFGVRDSSADFFKEQRKLAE--KSVRELTPDPGTTGTAGQVLYSLGQ 118
Query: 107 PLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALL 166
+ +L P A A L ++ + +GVD TA A ++
Sbjct: 119 LGGQAIAGSLMGGPWGAAATVGTLQGFSDYE-KSRADGVDYGTAVDKALVTGGTAALGVV 177
Query: 167 AP------------GAIASQSIAKTVASG----------------AVLNVPFGMVERGWS 198
P +++ ASG A N+ GM +RG S
Sbjct: 178 LPMSLGLRAGGAVAEGVSAALSVGRGASGALAGAVARAAPDLFYSAGTNIAMGMAQRGLS 237
Query: 199 SKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVN--DLKE 253
++ L GY DMA+ Y + D ++L TD ++G FGG+ + + +++ +R V+ ++
Sbjct: 238 AETLRRGGYEDMARQYDVMDAQALATDAVLGVAFGGLGRFINSRGEDVPVRRVSPEEIDA 297
Query: 254 GITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNT 313
+T V + +PG+ S + AH + + ++ GE D L
Sbjct: 298 ALTSSSHVNFEV-TVAPGVPVSVLSRNAHAQAMNKAMTDVLAGE--PVDVGAL------- 347
Query: 314 LEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHP 349
LE F +P Q + + A
Sbjct: 348 LEGAEFLQKMPRVNLASQSVREALGLRGGATTAAEQ 383
>gi|215487809|ref|YP_002330240.1| hypothetical protein E2348C_2742 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265881|emb|CAS10290.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
Length = 600
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 73/403 (18%), Positives = 135/403 (33%), Gaps = 55/403 (13%)
Query: 3 FNAVSDEDIRDNIKEWAQRP----------RVSPDIKWHTGLGKEVINMPAR----SLDK 48
NAV+ + E A P S +GL ++ P + +DK
Sbjct: 6 LNAVNQ---NQQLDEAASNPAGFNTDVGFFDNSGTAA-VSGLYSGLVAKPDQLLWAGMDK 61
Query: 49 LVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPL 108
+V+P + ++ + S A + + L P A AG++L+ +
Sbjct: 62 IVSPIAKFVNENTSINDTSAEYIGEQRKLAE--QQVKRLTPDAATTGTAGQVLNGLFDMG 119
Query: 109 TRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP 168
+ L + P A L +E +GVD TA + + + L P
Sbjct: 120 GQAVVGTLLAGPAGGAAAVTALQGFSEFE-KLTAQGVDFRTAQEAGLVQGVTAGAGTLIP 178
Query: 169 GAIASQS-----------------------------IAKTVASGAVLNVPFGMVERGWSS 199
++ ++ A +A A N+ FGM +RG ++
Sbjct: 179 MSLGLRAGGALAESVGAQLARTGESAVRNVAATAVRAAPDIAYAAGTNIAFGMAQRGLTA 238
Query: 200 KVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDL----KEGI 255
K L D GY +MA Y +FD +S+ D ++G FGG+ + +
Sbjct: 239 KTLRDGGYNEMAAQYDVFDRQSIAIDAVLGVAFGGVGRFLNARGESAATPEFSPAEVDAA 298
Query: 256 TERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLE 315
H +PG+ + + +AH L ++ + +G +
Sbjct: 299 LAANASHHAEIDVAPGVPVNVLSRDAHIQALQKAMNDVSQGRAVDVASIAEPASFSDIPG 358
Query: 316 DPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVER 358
+ + E L + +E S + E + +VE+
Sbjct: 359 RRNLISQAID-ETLYRSEEGSTQIAVDTRALEQQAAQALDVEQ 400
>gi|327252172|gb|EGE63844.1| hypothetical protein ECSTEC7V_3019 [Escherichia coli STEC_7v]
Length = 600
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 65/371 (17%), Positives = 126/371 (33%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVIGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQ---- 174
P A L +E +GVD TA + I + + P ++ +
Sbjct: 130 GPAGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTMIPMSLGLRAGGA 188
Query: 175 -------------------------SIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
S +A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVSATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + ++ S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPVDIDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|330007167|ref|ZP_08305909.1| hypothetical protein HMPREF9538_03598 [Klebsiella sp. MS 92-3]
gi|328535514|gb|EGF61974.1| hypothetical protein HMPREF9538_03598 [Klebsiella sp. MS 92-3]
Length = 632
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 72/383 (18%), Positives = 140/383 (36%), Gaps = 33/383 (8%)
Query: 32 TGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYI 91
G K +I+ PA + + VAP + + + G L + P
Sbjct: 57 VGFSKRLISDPAFTDN--VAPTINMFRVMFPDADKALNESYDD-LGKQLSSAREYIKPEA 113
Query: 92 AGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETAD 151
+A +++ + G ++ GA A S ++ +GVD++TA
Sbjct: 114 GSQGVAAQVIHGLGQ-FAPAIGASVIGG-PVVGAAAAAGSTYEQAYQDALAKGVDEQTAR 171
Query: 152 ALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA 211
+A ++ + + P A+ + +A + SG +N FG + R + LED+GY DMA
Sbjct: 172 TVAAEQSGFNAVGMGLPAAVGGR-LATRLLSGVGINAAFGGLNRFAVGETLEDNGYADMA 230
Query: 212 QHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPG 271
+ YR+FD ++++ D ++GA FGG H + S+ D + + +
Sbjct: 231 KQYRVFDGQAILIDSVLGAAFGGAHHFAARGNSVDARADSTPAVDDGTTAQEP------- 283
Query: 272 LHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTI---ADNTLEDPHFKPHLPEPEP 328
+ E P + + D + + L E +
Sbjct: 284 ----------------AATAEIQPQEQPPVSPAQESGVVPDTDASAPGATYDSRLAELQQ 327
Query: 329 LP-QYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFK 387
L Q DR+ ++ + + + E+ + + SS+R+ +
Sbjct: 328 LAGQVLSRGDRKVLTDEIHRAEYEIARIGEQRQALRDQRVGNSSSRRIRNRELAALEQRV 387
Query: 388 GERNQKLDPMRGADFTDAPHAKF 410
E +++P R A P +F
Sbjct: 388 QEIQSRIEPSRQALADSTPGGRF 410
>gi|85059663|ref|YP_455365.1| hypothetical protein SG1685 [Sodalis glossinidius str. 'morsitans']
gi|84780183|dbj|BAE74960.1| hypothetical protein [Sodalis glossinidius str. 'morsitans']
Length = 490
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/396 (17%), Positives = 128/396 (32%), Gaps = 60/396 (15%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSP---DIKWHTGLGKEVINMPARS-----------L 46
M + + S + A+ P + D + G G + L
Sbjct: 1 MSYFSFSPTQQNKALAYAAEHPIGTGTLQDAAFFDGAGTALFKGLWSGVRQADQVGWAAL 60
Query: 47 DKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPT 106
D ++P + + S + A + L P + AG++L +
Sbjct: 61 DTAISPVADAVSETFGVRDFSADFFKAQRKLAETR--VRELTPDLGTTGTAGQVLFSLGQ 118
Query: 107 PLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALL 166
+ +L P +A A L + + +GVD TA A +
Sbjct: 119 LGGQAIAGSLMGGPWSAAATVGTLQGFS-YYEKSRADGVDYGTAVDKALVTGGTAALGAV 177
Query: 167 AP------------GAIASQSIAKTVASG----------------AVLNVPFGMVERGWS 198
P +++ ASG A N+ GM +RG S
Sbjct: 178 LPMSLGLRAGGAVAEGVSAALSVGRGASGALAGAVARAAPDLFYSAGTNIAMGMAQRGLS 237
Query: 199 SKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVN--DLKE 253
++ L GY DMA+ Y + ++L TD ++G GG+ + + +++ +R V+ ++
Sbjct: 238 AETLRRGGYEDMARQYDVMASQALATDAVLGLAPGGLGRFINSRGEDVPVRRVSPEEIDA 297
Query: 254 GITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNT 313
+T V + +PG+ S + AH + + ++ GE D L
Sbjct: 298 ALTSSSHVNFEV-TVAPGVPVSVLSCNAHAQAMNKAMAGVLAGE--PVDVGAL------- 347
Query: 314 LEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHP 349
LE F P Q + A
Sbjct: 348 LEGAEFLQKTPRVNLASQSVREELGLRGEATTAAEQ 383
>gi|320175033|gb|EFW50146.1| 16 [Shigella dysenteriae CDC 74-1112]
Length = 600
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 65/371 (17%), Positives = 126/371 (33%), Gaps = 58/371 (15%)
Query: 12 RDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPAR----SLDKLVAPFREETH 58
+ E A P + D+ + +GL ++ P + +DK+V+P + +
Sbjct: 12 NQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMDKIVSPIAQFVN 71
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
+ + S + A + + L P A AG++L + +
Sbjct: 72 ENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLYGLFDMGGQAVVGTTLG 129
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS--- 175
P+ A L +E +GVD TA + I + L P ++ ++
Sbjct: 130 GPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGAGTLIPMSLGLRAGGA 188
Query: 176 --------------------------IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+A A N+ FGM +RG ++K L D GY +
Sbjct: 189 LAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQRGLTAKTLRDGGYSE 248
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMH---SKQVQNMSLRLVNDLKEGITERLPYKHGVK 266
MA Y + D +++ D ++G FGG+ + + + S + + H +
Sbjct: 249 MANQYDVLDRQAIAIDAVLGVVFGGVGRFINSRGEPTSAPNFSPVDIDAALAANAAHHAE 308
Query: 267 -SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+PG+ + + +H L + + +G D + +E F
Sbjct: 309 IDIAPGVPINVLSRNSHIQALRKAMSDVSQGR--PVDVASI-------VESASFSEIPGR 359
Query: 326 PEPLPQYKEHS 336
L Q +
Sbjct: 360 KSLLSQAVNEA 370
>gi|298485994|ref|ZP_07004068.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159471|gb|EFI00518.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 448
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 83/411 (20%), Positives = 148/411 (36%), Gaps = 47/411 (11%)
Query: 31 HTGLGKEVINMPARSLDKLVAPFREET----HDQ--PNYYRGSRTDPHSVGT-------- 76
+ LGK ++ + + +Q +Y + + S
Sbjct: 36 YDSLGKGLVRGAIEGGAAAESTYWNAILSGGPEQNIFDYTQSTTLSRESQQKIGDDLNTL 95
Query: 77 GAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAES 136
+ L P A +AG+++ L R A+ + P A + +
Sbjct: 96 REETASAVMDLRPDPAEVGIAGQIIGEAAAILPRAVIGAVAAGPAGAAIAAGAPAGYSRR 155
Query: 137 SIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERG 196
++ EG+D+ TA L E +V + + P A + + A NV GM RG
Sbjct: 156 AVS-MAEGIDENTATLLGLSEGVVTGAGAILPAAQFVKPVLGDAAIAIGANVGLGMAHRG 214
Query: 197 WSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGIT 256
++ +L+ +GY A YR D ++ TD ++GA F G+ +M + + +T
Sbjct: 215 TAAALLDSNGYAAQAAQYRAMDGTAIATDAILGAAFFGIGRS---SMRRPTTDQVDAALT 271
Query: 257 ERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLED 316
ER +H ++PGL + AH D L ++ + RGE + +Q+
Sbjct: 272 ER-NAQHADIDTAPGLPVDPRSAIAHQDALRAAIEQINRGEAVVL-PDNIQSAT-FLRTP 328
Query: 317 PHFKP-HLPEPEPLPQYKEHSD--RQKPSEPLAEHPHPKRKEVERELSEIEGA------- 366
P E L +E + + A P K+V EL+ + +
Sbjct: 329 DDVAPIAPSRAEALIAAREELAPVLRNELQQDATAAIPNVKDVRTELANLSKSLDGLDES 388
Query: 367 ----------------KKESSARKFFDEGSPDHSPFKGERNQKLDPMRGAD 401
+ ES+AR+ + + + E N+ LD R AD
Sbjct: 389 FRARAKEFQQQGQSRKQAESAARQSIADERTQLTDRQTELNESLDGNRSAD 439
>gi|319793416|ref|YP_004155056.1| phage-like protein [Variovorax paradoxus EPS]
gi|315595879|gb|ADU36945.1| phage-like protein [Variovorax paradoxus EPS]
Length = 937
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 60/298 (20%), Positives = 106/298 (35%), Gaps = 17/298 (5%)
Query: 33 GLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIA 92
GL + + PA L P + + G+ D L L A
Sbjct: 43 GLARGTVAKPALLLGDAATPLLRTSAQAVDKTLGTSLDAWLTDQQKRNTTALEQLRSDPA 102
Query: 93 GAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADA 152
AG+++ + + A+ P A L Y +GV TA A
Sbjct: 103 TTGFAGQVVGGLFDLGS----SAILYTPEGAAVLEGYGRR-----QELIGQGVAPGTATA 153
Query: 153 LAWREAIVHTSALLAPG-------AIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDH 205
+ + AP +++A+ +A GA +V G+ ERG+S +L+
Sbjct: 154 VGAVSGAATYVGVKAPITLGQQAIGQGGRAMAQNLAYGATASVAGGVAERGFSRDLLKAA 213
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGV 265
GY + A +D +L + +GA F G + ++R +T H
Sbjct: 214 GYGEQAAPLEPYDKTALAAEATLGALFSGGAAALHARSTVRGQAATDAALT-VTTVDHAQ 272
Query: 266 KSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHL 323
+ ++PG T A AH L+ ++ ++R E + ++ T + P + L
Sbjct: 273 RGTAPGTPTDARAASAHASALSTAIEQVLRNEPANVGEQMADTAFVRPVPSPEIRAEL 330
>gi|169795395|ref|YP_001713188.1| phage-like protein [Acinetobacter baumannii AYE]
gi|169148322|emb|CAM86187.1| hypothetical protein; putative phage related protein [Acinetobacter
baumannii AYE]
Length = 954
Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/355 (16%), Positives = 109/355 (30%), Gaps = 47/355 (13%)
Query: 2 YFNAVSDEDIRDNIKEWAQRPRVSPDI--KWHTGLGKEVINMPARSL--------DKLVA 51
+++ +D++ E QR ++ + G+ I+ P R + D + A
Sbjct: 3 WYDTFADDE--QKSVEELQRKGITGKPTVQKEVGIFDGAISSPFRGMAIGLNKVGDAISA 60
Query: 52 PFR----EETHDQPNYYRGSRTDPHSVGTGA------HLVEGLTSLAPYIAGAALAGKLL 101
P ++ + +P+ +LV G + + G +
Sbjct: 61 PIDAVVDRVSYSLKDVSTNEFIEPYEEFKAKREKARDNLVYGTIADLEDKDNTGIVGNIG 120
Query: 102 SFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVH 161
+ L R A S L A L + +GVD+ TA +A A+
Sbjct: 121 VGVGDYLWRGALGVATSGTLGAATLTGGSTG-NYVYTDLTRKGVDENTALKVAGVNAVGD 179
Query: 162 TSALLAPGAIASQ---SIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFD 218
P + + + A + S ++L+ +GY A+ Y +
Sbjct: 180 AIGTALPISYGFKGSGGLVADAALSVGGATGLNTGMQYTSEQLLKSNGYDKQAKQYEVT- 238
Query: 219 MESLITDGLIGA-FFGGMHSKQVQNMSLRLVNDLKEGITE-----------------RLP 260
ES+ TD LI + FGG + L D+ I +
Sbjct: 239 GESVATDLLINSLMFGGARYLGTRQNQLD--QDVDAEINQLNSDDFETRNDALNDALVRN 296
Query: 261 YKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLE 315
++ P T H L + +++G+ NT++
Sbjct: 297 SFEFEDTTFPVRTTDPVQQNKHYQNLDAATEQILKGQPVSVPNAVQGEPRRNTID 351
>gi|332875213|ref|ZP_08443046.1| cation diffusion facilitator family transporter [Acinetobacter
baumannii 6014059]
gi|332736657|gb|EGJ67651.1| cation diffusion facilitator family transporter [Acinetobacter
baumannii 6014059]
Length = 957
Score = 95.4 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/331 (16%), Positives = 95/331 (28%), Gaps = 40/331 (12%)
Query: 7 SDEDIRDNIKEWAQRPRVSP-DIKWHTGLGKEVINMPARSLDKLV----APFR----EET 57
+ +D + Q P P D G A L+K+ AP +
Sbjct: 12 NQQDFEKLNSQGLQHPDTRPNDPGVFDGAISSPFRGMAIGLNKVGDAISAPIDAVVDRVS 71
Query: 58 HDQPNYYRGSRTDPHSVGTGA------HLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRL 111
+ + +P+ +LV G + + G + + L R
Sbjct: 72 YSLKDVSTNEFIEPYEEFKAKREKARDNLVYGTIADLEDKDNTGIVGNIGVGVGDYLWRG 131
Query: 112 AGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAI 171
A L A L + +GVD+ TA +A A+ P
Sbjct: 132 ALGVATGGTLGAATLTGGSTG-NYVYTDLTRKGVDENTALKVAGVNAVGDAIGTALPIGY 190
Query: 172 ASQ---SIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLI 228
+ + A + S ++L+ +GY A+ Y + ES+ TD LI
Sbjct: 191 GFKGTGGLVADAALSVGGATGLNTGMQYASEQLLKSNGYDKQAKQYEVT-GESVATDLLI 249
Query: 229 GA-FFGGMHSKQVQNMSLRLVNDLKEGITE-----------------RLPYKHGVKSSSP 270
+ FGG + L D+ I + ++ P
Sbjct: 250 NSLMFGGARYLGSKQNQLD--QDVDAEINQLNSDDFETRNDALNDALVKNSFEFEDTTLP 307
Query: 271 GLHTSFDAYEAHTDTLAHGVDSLVRGEYPHF 301
T H L + +++G+
Sbjct: 308 VQTTDPVQQNKHYQNLDVATEQILKGQPVSV 338
>gi|294648410|ref|ZP_06725909.1| hypothetical protein HMP0015_0118 [Acinetobacter haemolyticus ATCC
19194]
gi|292825715|gb|EFF84419.1| hypothetical protein HMP0015_0118 [Acinetobacter haemolyticus ATCC
19194]
Length = 837
Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/318 (18%), Positives = 103/318 (32%), Gaps = 20/318 (6%)
Query: 64 YRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAA 123
SR + + + P AG + S I ++ A A P
Sbjct: 51 NAASRFVEGDEVADKRMQQVNEAFTPL--NQGTAGHIASGITEVVSAGAVGAPL-GPYGM 107
Query: 124 GALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGA-IASQSIAKTVAS 182
A + E + Q GVD++TAD + + + P + + +S+ A+
Sbjct: 108 AATVGLGTRAIEHTKLTQQLGVDQDTADTASNIYGATNAALAFLPVSNVFKKSLIADYAA 167
Query: 183 GAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIF--DMESLITDGLIGAFFGGMHS--K 238
V G L+ GY Y+ D ++ + IG+ F
Sbjct: 168 LVVAPTAVGQGMTYAEGAYLDSKGYKKQGAMYKDMATDPNAIFMNMAIGSTFFAAGRYMN 227
Query: 239 QVQNMSLRLVNDLKEGITERLPYKHGVKS----SSPGLHTSFDAYEAHTDTLAHGVDSLV 294
N L K + S P + + D H L +D ++
Sbjct: 228 AKGNADLPEAEVHKAEADFNATVEQAQTDADVSSMPNIADTVDDLAQHEANLNQAIDQVM 287
Query: 295 RGEYPHFDQE---KLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHP 351
+GE + + KL+T+ D H + + + +P + + R S LA + +
Sbjct: 288 KGEKVNISEATGGKLKTLDD---VKKHIQANQKKVQPTLEDLSNKVRSSISSRLAANKNN 344
Query: 352 KR-KEVERELSEIEGAKK 368
E + + I G KK
Sbjct: 345 SSNDEATKPFTAI-GTKK 361
>gi|293609610|ref|ZP_06691912.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828062|gb|EFF86425.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 954
Score = 88.4 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/341 (15%), Positives = 100/341 (29%), Gaps = 37/341 (10%)
Query: 7 SDEDIRDNIKEWAQRPRVSP-DIKWHTGLGKEVINMPARSLDKLV----APFR----EET 57
+ +D + + Q P + P + +G A L+K+ AP +
Sbjct: 12 NQQDFEELNSKGLQHPDIRPNEPSAFSGAISSPFRGAAIGLNKVGDAISAPIDAVVDRVS 71
Query: 58 HDQPNYYRGSRTDPHSVGTGA------HLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRL 111
+ + +P+ +LV G + G+ L R
Sbjct: 72 YTLKDVSTNEFIEPYEEYKAKREKARDNLVYGAIDKLEDKENTGIVGRFGVGAGDYLWRG 131
Query: 112 AGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAI 171
A A L A L + +GVD+ TA +A A+ P +
Sbjct: 132 ALGAATGGTLGAATLTGGSTG-NYIYTDLTRKGVDENTALQVAGINAVGDAIGTALPMSY 190
Query: 172 ASQ---SIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLI 228
+ + A + S+++L+ G A+ + + ES+ TD +
Sbjct: 191 GFRGTGGLVGDAALSVGGATALNTGVQYTSNQILKAAGNEKEAKQFEV-TGESVATDLAL 249
Query: 229 GA-FFGGMHSKQVQ------NMSLRLVNDLKEGITER---------LPYKHGVKSSSPGL 272
A FGG + ++ + + I R ++ P
Sbjct: 250 NALLFGGARYLGSRQKQLDQDVDAEINQLNADDIETRNDQINDTLVRNSFEFEDTTLPVR 309
Query: 273 HTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNT 313
T H L D +++G+ +Q A
Sbjct: 310 TTDPVQQNKHYQNLDAATDQILKGQTVSV-PNTVQGEARKA 349
>gi|254251752|ref|ZP_04945070.1| Soluble lytic murein transglycosylase [Burkholderia dolosa AUO158]
gi|124894361|gb|EAY68241.1| Soluble lytic murein transglycosylase [Burkholderia dolosa AUO158]
Length = 764
Score = 81.9 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 84/245 (34%), Gaps = 11/245 (4%)
Query: 32 TGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYI 91
T +++ P SL + + + + G L L P
Sbjct: 61 TAGASQMLTDPTESLLNPQVQEETDRRLGETFRKQREGTLFTSAAGQRLYSLSDMLRPDP 120
Query: 92 AGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETAD 151
+++ + L ++ A+ P+A A+ S + EGVD T
Sbjct: 121 QNTTTTDQIVQGAVSGLVQIVPAAVLGGPVAGAAVGGASIGLGRSE-ELKREGVDVGTRT 179
Query: 152 ALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA 211
A+ E + + + P +IA+T+ AV + + +L++ GY +A
Sbjct: 180 AVGAVEGALGAAGAVLPA--GGSTIARTLGLVAVGGPGMAIGQSTAEKAILKNAGYDHLA 237
Query: 212 QHYRIFDMESLITDGLIGAFFGGMH-------SKQVQNMSLRL-VNDLKEGITERLPYKH 263
D +L L+ FFGG+H ++ +N + L + LPY
Sbjct: 238 DQIDPLDPTNLAASTLMAGFFGGLHAGGLASAARTARNADPSTPLPSLDVAARKALPYNS 297
Query: 264 GVKSS 268
+ +
Sbjct: 298 PILDA 302
>gi|48697206|ref|YP_024936.1| SLT domain-containing tail structural protein [Burkholderia phage
BcepC6B]
gi|47779012|gb|AAT38375.1| gp16 [Burkholderia phage BcepC6B]
Length = 763
Score = 69.9 bits (169), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 100/302 (33%), Gaps = 8/302 (2%)
Query: 73 SVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSH 132
GA + + P A + + + + L ++ A+ PLA A+
Sbjct: 101 ESPLGARAYDLSDTFKPDPTRATAIDQTVQGVVSGLAQIVPAAVLGGPLAGAAVGGASIG 160
Query: 133 KAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGM 192
+ + + +GVD T A+ E + + + P +A ++ +T+ A +
Sbjct: 161 MSRAE-DLKRQGVDVGTRTAVGAVEGALTAAGAVLP--VAGSTLPRTIGLVAAGGPGAAI 217
Query: 193 VERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLK 252
+ +L + GY +A D +L L+ F G+H+ + +
Sbjct: 218 AQATIEKAILRNAGYDHLADQINPLDPINLAAATLMAGTFAGVHTAATARTARQNAPAAT 277
Query: 253 EGITE-RLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSL-VRGEYPHFDQEKLQTIA 310
+ + + + +P L + +L GE + Q + A
Sbjct: 278 VPLQSLAIDARRALPYDAPQLDAYAAQAAQAAGVPPELMLALKNAGEKSNSGQVSPKGAA 337
Query: 311 DNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKES 370
+ P +P ++ LA+ ++ +++ G K++
Sbjct: 338 GVSQMMPENLRKYGVTDP---TDPMQALDGMAKYLADTQKQYGGNLQAMIADYNGGPKQA 394
Query: 371 SA 372
+A
Sbjct: 395 AA 396
>gi|221213943|ref|ZP_03586916.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD1]
gi|221166120|gb|EED98593.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD1]
Length = 749
Score = 67.2 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 98/302 (32%), Gaps = 8/302 (2%)
Query: 73 SVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSH 132
G + + P + + + + LT++ A+ PL A+
Sbjct: 101 ESPLGTRAYDLSDTFKPDPTRTTAIDQTVQGVVSGLTQIVPAAVLGGPLTGAAVGGTSIG 160
Query: 133 KAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGM 192
+ + + +GVD T A+ E + + + P +A ++ +TV A +
Sbjct: 161 MSRAE-DLKRQGVDVGTRTAVGAVEGALTAAGAVLP--VAGSTLPRTVGLVAAGGPGAAI 217
Query: 193 VERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLK 252
+ +L + Y +A D ++ L+ F G H+ + +
Sbjct: 218 AQASIEKAILRNADYDHLADQIDPLDPVNIAASTLMAGVFAGAHTVATARTARQTATAPT 277
Query: 253 EGITE-RLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSL-VRGEYPHFDQEKLQTIA 310
+ L + + ++P L + +L GE + Q + A
Sbjct: 278 ASLQSLSLDARRALPYNAPELDAYAVQAAQAAGVPPELMLALKNAGEKSNSGQVSRKGAA 337
Query: 311 DNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKES 370
+ P +P + ++ LA+ ++ +++ G +++
Sbjct: 338 GVSQMMPENLRKYGVTDPTDPVQ---ALDGMAKYLADTQKQYGGNLQAMIADYNGGPRQA 394
Query: 371 SA 372
+A
Sbjct: 395 AA 396
>gi|262371857|ref|ZP_06065136.1| predicted protein [Acinetobacter junii SH205]
gi|262311882|gb|EEY92967.1| predicted protein [Acinetobacter junii SH205]
Length = 876
Score = 66.1 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 91/293 (31%), Gaps = 23/293 (7%)
Query: 24 VSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYY-RGSRTDPHSVGTGAHLVE 82
D ++ + + A + VA E P+ RG + + +
Sbjct: 12 NQDDPRFKPKSERGGFSDGALGIVSGVAMGTVEAATAPDALIRGDKKAAALRAQNLEIFK 71
Query: 83 GLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYL---SHKAESSIH 139
+ G L+ T + A L + + AL + L
Sbjct: 72 -----PDDLGGVGEFTYGLTKDFTRIGWNAVTTLGTGGVPGLALNSGLFGYQTFEAEKSD 126
Query: 140 HQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSS 199
+G D +TA + + ++ P ++S+ + L G+
Sbjct: 127 LLNKGADVKTARTGGAIKGLADAASFAIPTHGVAKSVVADAVATTALATGAGVAGDYLEG 186
Query: 200 KVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH--------SKQVQNMSLRLVNDL 251
L+ + +AQ+ +L L A GGM +++ ++ +++
Sbjct: 187 SFLKTNENKKVAQYGEALKENALSPSTL--AANGGMALLLNLWANKGRLRPEQIKDHSNV 244
Query: 252 KEGITERLPYKHGVKS---SSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHF 301
+ + + ++ ++P T+ +H D L ++S + E
Sbjct: 245 DT-MNDAAHIQANIEHAEGTNPFSPTNAKEANSHFDALDSAMESALNDELVSL 296
>gi|226953661|ref|ZP_03824125.1| possible phage-like protein [Acinetobacter sp. ATCC 27244]
gi|226835533|gb|EEH67916.1| possible phage-like protein [Acinetobacter sp. ATCC 27244]
Length = 876
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 87/293 (29%), Gaps = 23/293 (7%)
Query: 24 VSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYY-RGSRTDPHSVGTGAHLVE 82
D ++ + + VA E P+ RG + + +
Sbjct: 12 NQDDPRFKPKSERGGFSDGVLGTVSGVAMGTIEAATAPDALIRGDKKAAALRAQNLEIFK 71
Query: 83 GLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYL---SHKAESSIH 139
+ G L+ T + A L + + AL + L
Sbjct: 72 -----PDDLGGVGEFTYGLTKDFTRIGWNAVTTLGTGGVPGLALNSGLFGYQTFEAEKSD 126
Query: 140 HQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSS 199
+G D +TA + + P ++S+ + L G+
Sbjct: 127 LLNKGADIKTARTGGAIKGVTDALGFAIPTHGVAKSVVADAVATTALATGAGVAGDYLEG 186
Query: 200 KVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH--------SKQVQNMSLRLVNDL 251
LE++ +AQ+ + L A GGM +++ ++ +++
Sbjct: 187 SFLENNENKKVAQYGEALKENATSPSTL--AANGGMALLLNLWANKGRLRPEQIKDHSNV 244
Query: 252 KEGITERLPYKHGVKS---SSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHF 301
+ + + ++ ++P T+ +H D L ++S + E
Sbjct: 245 DT-MNDAAHIQANIEHAEGTNPFSPTNAKEANSHFDALDSAMESALNDELVSL 296
>gi|221201509|ref|ZP_03574548.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD2M]
gi|221207935|ref|ZP_03580941.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD2]
gi|221172120|gb|EEE04561.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD2]
gi|221178777|gb|EEE11185.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD2M]
Length = 749
Score = 61.5 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 3/160 (1%)
Query: 73 SVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSH 132
G + + P + + + + + LT++ A+ PLA A+
Sbjct: 101 ESTLGTRAYDLADTFKPDPTRTTVIDQTVQGVMSGLTQIVPAAVLGGPLAGAAVGGTSIG 160
Query: 133 KAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGM 192
+ + + +GVD T A+ E + + + P +A ++ +TV A +
Sbjct: 161 MSRAE-DLKRQGVDVGTRTAVGAVEGALTAAGAVLP--VAGSTLPRTVGLVAAGGPGAAI 217
Query: 193 VERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFF 232
+ +L + Y +A D ++ L+ F
Sbjct: 218 AQASIEKAILRNADYDHLADQIDPLDPVNIAASTLMAGVF 257
>gi|317156431|ref|XP_001825741.2| 3-oxoacyl-[acyl-carrier-protein] synthase [Aspergillus oryzae RIB40]
Length = 1625
Score = 50.3 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 37/272 (13%)
Query: 228 IGAFFGGMHSKQVQNMSLRLVNDLKEGI-------TERLPYKHGVKSSSPGLHTSFDAYE 280
IG+ GG+HS + L D+++ I T + SS+ + TS A
Sbjct: 1132 IGSGLGGVHSLKKMFRDRYLDKDVQKDILQETFINTTAAWVNMLLISSAGPIRTSVGACA 1191
Query: 281 AHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQK 340
++L G +++V G + E F P + K+ Q+
Sbjct: 1192 TSIESLETGFETIVTGRAKICLVGGYDDMTQALAE--EFANMKATTNPEEEAKKGRLPQE 1249
Query: 341 PSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHS--PFKGERNQKLD--- 395
S P AE + VE S+ G + +SAR D G P H + G + K
Sbjct: 1250 MSRPAAES---RSGFVE---SQGSGVQVITSARLALDLGLPIHGIVAWVGTASDKTSRSV 1303
Query: 396 --PMRG--ADFTDAPHAKFDAT---------TFTESLPHVDEQTMHRFSELKERHPVEAR 442
P +G + + P+++F + L ++E L+E+ +
Sbjct: 1304 PAPGQGILTNAREKPNSRFPSPLLDIRYRKRRLEARLKQINESVDLEVQMLEEQMTQDG- 1362
Query: 443 EVLEGLQEKLQGTK---EIKTKSLIKEAINCF 471
EV E LQE+LQ K E + + KEA+N F
Sbjct: 1363 EVPEELQEELQNHKRFVEGEAERQRKEALNTF 1394
>gi|83774485|dbj|BAE64608.1| unnamed protein product [Aspergillus oryzae]
Length = 1783
Score = 50.3 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 37/272 (13%)
Query: 228 IGAFFGGMHSKQVQNMSLRLVNDLKEGI-------TERLPYKHGVKSSSPGLHTSFDAYE 280
IG+ GG+HS + L D+++ I T + SS+ + TS A
Sbjct: 1132 IGSGLGGVHSLKKMFRDRYLDKDVQKDILQETFINTTAAWVNMLLISSAGPIRTSVGACA 1191
Query: 281 AHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQK 340
++L G +++V G + E F P + K+ Q+
Sbjct: 1192 TSIESLETGFETIVTGRAKICLVGGYDDMTQALAE--EFANMKATTNPEEEAKKGRLPQE 1249
Query: 341 PSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHS--PFKGERNQKLD--- 395
S P AE + VE S+ G + +SAR D G P H + G + K
Sbjct: 1250 MSRPAAES---RSGFVE---SQGSGVQVITSARLALDLGLPIHGIVAWVGTASDKTSRSV 1303
Query: 396 --PMRG--ADFTDAPHAKFDAT---------TFTESLPHVDEQTMHRFSELKERHPVEAR 442
P +G + + P+++F + L ++E L+E+ +
Sbjct: 1304 PAPGQGILTNAREKPNSRFPSPLLDIRYRKRRLEARLKQINESVDLEVQMLEEQMTQDG- 1362
Query: 443 EVLEGLQEKLQGTK---EIKTKSLIKEAINCF 471
EV E LQE+LQ K E + + KEA+N F
Sbjct: 1363 EVPEELQEELQNHKRFVEGEAERQRKEALNTF 1394
>gi|238492181|ref|XP_002377327.1| fatty acid synthase alpha subunit, putative [Aspergillus flavus
NRRL3357]
gi|220695821|gb|EED52163.1| fatty acid synthase alpha subunit, putative [Aspergillus flavus
NRRL3357]
Length = 1650
Score = 50.3 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 37/272 (13%)
Query: 228 IGAFFGGMHSKQVQNMSLRLVNDLKEGI-------TERLPYKHGVKSSSPGLHTSFDAYE 280
IG+ GG+HS + L D+++ I T + SS+ + TS A
Sbjct: 1136 IGSGLGGVHSLKKMFRDRYLDKDVQKDILQETFINTTAAWVNMLLISSAGPIRTSVGACA 1195
Query: 281 AHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQK 340
++L G +++V G + E F P + K+ Q+
Sbjct: 1196 TSIESLETGFETIVTGRAKICLVGGYDDMTQAVAE--EFANMKATTNPEEEAKKGRLPQE 1253
Query: 341 PSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHS--PFKGERNQKLD--- 395
S P AE + VE S+ G + +SAR D G P H + G + K
Sbjct: 1254 MSRPAAES---RSGFVE---SQGSGVQVITSARLALDLGLPIHGIVAWVGTASDKTSRSV 1307
Query: 396 --PMRG--ADFTDAPHAKFDAT---------TFTESLPHVDEQTMHRFSELKERHPVEAR 442
P +G + + P+++F + L ++E L+E+ +
Sbjct: 1308 PAPGQGILTNAREKPNSRFPSPLLDIRYRKRRLEARLKQINESVDLEVQMLEEQMTQDG- 1366
Query: 443 EVLEGLQEKLQGTK---EIKTKSLIKEAINCF 471
EV E LQE+LQ K E + + KEA+N F
Sbjct: 1367 EVPEELQEELQNHKRFVEGEAERQRKEALNTF 1398
>gi|315122596|ref|YP_004063085.1| hypothetical protein CKC_04240 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495998|gb|ADR52597.1| hypothetical protein CKC_04240 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 283
Score = 46.8 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 12/185 (6%)
Query: 50 VAPFREETHDQP-NYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPL 108
+ F HD P + DP G A + + G ++ I +
Sbjct: 70 IEKFYRLFHDNPLKISDPLQYDPDQKKLG---------FWGSTAHSIVEGAVIYGIGNII 120
Query: 109 TRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP 168
A L G L ++ ++S + + G+D+ T+ L + + P
Sbjct: 121 GSSFSANPFVASL-VGLLTISATYGHQTSENMKHLGIDESTSQTLGLLSGGFYMLSFAIP 179
Query: 169 GAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLI 228
K + +GA + E+ ++ L GY + + + ++I D ++
Sbjct: 180 YIHRGDVSLKKIINGAGQQIATRTTEQLTTNGTLYFQGY-EKEEPTEGWSNYTVIVDVIL 238
Query: 229 GAFFG 233
G
Sbjct: 239 TVGLG 243
>gi|291243144|ref|XP_002741464.1| PREDICTED: PHD finger protein 7-like [Saccoglossus kowalevskii]
Length = 1231
Score = 46.0 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 62/186 (33%), Gaps = 18/186 (9%)
Query: 234 GMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSL 293
G+ S ++ + + K+G+ E P SSP ++ + S
Sbjct: 743 GVESSPLRKLDVESSPLRKQGV-ESSPLSRLNDESSPLRKLDVESSPLRKQGVESSPLSR 801
Query: 294 VRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKR 353
+ E KL +E + E PL + + S P L P R
Sbjct: 802 LNDESSPL--RKLD------VESSPLRKQGVESSPLSRLNDESS---PLRKLDVESSPLR 850
Query: 354 KEVERELSEIEGAKKESSA-RKFFDEGSPDHSPFKGERNQKLD----PMRGADFTDAPHA 408
K+ R S + ESS RK DE SP KLD P+R D P
Sbjct: 851 KQGVRS-SSLSRLNDESSPLRKLNDESSPLRKLDDESSLSKLDVESLPLRKLDVESLPFR 909
Query: 409 KFDATT 414
K D +
Sbjct: 910 KLDVES 915
>gi|325962152|ref|YP_004240058.1| membrane protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323468239|gb|ADX71924.1| putative membrane protein [Arthrobacter phenanthrenivorans Sphe3]
Length = 678
Score = 45.3 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 50/327 (15%), Positives = 96/327 (29%), Gaps = 37/327 (11%)
Query: 56 ETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLA 115
T+D NY + D L + S G A +LL+ T +R+ A
Sbjct: 138 TTNDANNYLLSTIVD--------KLTTAVHSRVATEVGEETANQLLTGFGTIHSRMVQAA 189
Query: 116 LQSAPLAAGAL------------YAYLS-HKAESSIHH--QIEGVDKETADALAWREAIV 160
+ +A G A LS E +G ++ T A +
Sbjct: 190 DGAGQVADGVARLRDGTATLREGTAGLSNGAGELYQGQVKLRDGANQLTDGAGQLSSGLS 249
Query: 161 HTSALLAPGAIASQSIAKTVASGAVLNVPFG-----------MVERGWSSKVLEDHGYPD 209
A +Q++A A A N ++G ++V + +
Sbjct: 250 VLKDKTATLPTDTQTLANGAARVAAGNAQLNTKVQEAAAQLEAADQGLRARVADTNARLV 309
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMHSKQVQ-NMSLRLVNDLKEGITERLPYKHGVKSS 268
A ++++ D A + + + + + L +G + +
Sbjct: 310 AAGVLTQEQADAILADFDATAGSSPVAAARTKIQADAAQIQQLADGAASVSTGAAQLAAG 369
Query: 269 SPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEP 328
+P L + + D L G +L GE D + +AD L
Sbjct: 370 TPALRDAVSQASSGADQLHTGAAALATGEQSALDGAR--RLADGARTLDDGAAQLSAGAG 427
Query: 329 LPQYKEHSDRQKPSEPLAEHPHPKRKE 355
+ + + + P+P +
Sbjct: 428 TAADGSRTLADELGKGAGQVPNPDDSQ 454
>gi|74693947|sp|Q758T8|SWC3_ASHGO RecName: Full=SWR1-complex protein 3
Length = 688
Score = 44.9 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 285 TLAHGVDSLVRGEYPHFDQEKLQTI---ADNTLEDPHFKPHLPEPEPLPQYKE------H 335
L + ++ G+ P D E+ + A N P++KP L + + +E
Sbjct: 286 ALNKLMIAVANGQAPPADVERFKVFIERARNMEPPPNWKPRLSSRPVIKRTEEPTVEQQE 345
Query: 336 SDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQ 392
S Q PS PL P+ +V+ S G+ SS F E S S +GE ++
Sbjct: 346 SASQTPSTPLPRKASPESSQVDNLSSPPHGSDPNSS----FTEASMSDS--RGELSE 396
>gi|159127542|gb|EDP52657.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 587
Score = 44.5 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 76/238 (31%), Gaps = 25/238 (10%)
Query: 216 IFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSS-SPGLHT 274
+ D +++D A ++ L +V+DL P K + S SP
Sbjct: 207 VKDGRRILSDKTPNACL-----SPARSKHLDVVSDL-------SPVKRSLFESRSPKKLL 254
Query: 275 SFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKE 334
++ T+ D R + ++++ + N + + + P P+Y +
Sbjct: 255 PSPSFVGQKRTIDQVEDD-SRINKENVQIQRVEQVERN--HERNLQDQTITPATAPKYDQ 311
Query: 335 HSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKL 394
PS + + R L S D SP +P R
Sbjct: 312 QQSDAMPSNDTQHTEPQQSNQQTRRL-------PLSDIVDLIDTPSPKETPKTNSRTIPE 364
Query: 395 DPMRGADFTDAPHAKFDATTFTESLPHV-DEQTMHRFSELKERHPVEAREVLEGLQEK 451
DP F A + ++ HV D Q R SEL+ R L L +K
Sbjct: 365 DPQTRKLFIQE-KASLLRSRIRSAMRHVRDHQFDRRLSELEAHSRKFPRLSLPALSQK 421
>gi|254579100|ref|XP_002495536.1| ZYRO0B13662p [Zygosaccharomyces rouxii]
gi|238938426|emb|CAR26603.1| ZYRO0B13662p [Zygosaccharomyces rouxii]
Length = 314
Score = 44.5 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Query: 321 PHLPEPEPLPQYKEHSDRQ---KPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFD 377
EPE ++ + + +P +P AE H E ++ SE + A +E S D
Sbjct: 127 EQPAEPEQSATEEQPAAEEKPAEPEQPAAEEKHEDASEKHQDASEPQPAPEEDSNESEQD 186
Query: 378 EGSPDHSPFKGERNQK---LDPMRGADFTDAPHAKFDATTFTESLPH-VDEQTMHRFSEL 433
E + ++P GE N L M + A F ++E+ P +D + +F +
Sbjct: 187 EKATAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSEAEPKGID--CIEKFQNM 244
Query: 434 KE---RHPVEAREVLEGLQEKLQGTKEIKTKSLIKEA 467
+E +HP E L+ +E + + ++ + + +A
Sbjct: 245 QECFRKHPEHYAEQLKDEEEAIAAQESVEAEVAVVDA 281
>gi|70999624|ref|XP_754529.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|66852166|gb|EAL92491.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
Length = 587
Score = 44.5 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 76/238 (31%), Gaps = 25/238 (10%)
Query: 216 IFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSS-SPGLHT 274
+ D +++D A ++ L +V+DL P K + S SP
Sbjct: 207 VKDGRRILSDKTPNACL-----SPARSKHLDVVSDL-------SPVKRSLSESRSPKKLL 254
Query: 275 SFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKE 334
++ T+ D R + ++++ + N + + + P P+Y +
Sbjct: 255 PSPSFVGQKRTIDQVEDD-SRINKENVQIQRVEQVERN--HERNLQDQAITPATAPKYDQ 311
Query: 335 HSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKL 394
PS + + R L S D SP +P R
Sbjct: 312 QQSDAMPSNDTQHTEPQQSNQQTRRL-------PLSDIVDLIDTPSPKETPKTNSRTIPE 364
Query: 395 DPMRGADFTDAPHAKFDATTFTESLPHV-DEQTMHRFSELKERHPVEAREVLEGLQEK 451
DP F A + ++ HV D Q R SEL+ R L L +K
Sbjct: 365 DPQTRKLFIQE-KASLLRSRIRSAMRHVRDHQFDRRLSELEAHSRKFPRLSLPALSQK 421
>gi|302307784|ref|NP_984524.2| AEL336Wp [Ashbya gossypii ATCC 10895]
gi|299789167|gb|AAS52348.2| AEL336Wp [Ashbya gossypii ATCC 10895]
Length = 688
Score = 44.1 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 285 TLAHGVDSLVRGEYPHFDQEKLQTI---ADNTLEDPHFKPHLPEPEPLPQYKE------H 335
L + ++ G+ P D E+ + A N P++KP L + + +E
Sbjct: 286 ALNKLMIAVANGQAPPADVERFKVFIERARNMEPPPNWKPRLSSRPVIKRTEEPTVEQQE 345
Query: 336 SDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQ 392
S Q PS PL P+ +V+ S G+ SS F E S S +GE ++
Sbjct: 346 SASQTPSTPLPRKASPESSQVDNLSSPPHGSDPNSS----FTEASMSDS--RGELSE 396
>gi|194853302|ref|XP_001968138.1| GG24671 [Drosophila erecta]
gi|190660005|gb|EDV57197.1| GG24671 [Drosophila erecta]
Length = 5335
Score = 44.1 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 74/215 (34%), Gaps = 17/215 (7%)
Query: 246 RLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDS------LVRGEYP 299
++ E + + +S + + TD + S + G+
Sbjct: 1593 DAGQEVGEEKSNPPLDESSQLEASSSTSAAEKERQISTDAANAAMSSKPNYVYINTGDED 1652
Query: 300 HFDQEKLQTIADNTLEDPHFKPHLPEPEPLP-QYKEHSDRQKPSEPLAEHPHPKRKEVER 358
+ + + E KP PEP + K SD P + + E ++
Sbjct: 1653 SMVVQLVLAMRMGKRELIPDKPKEKAPEPKKDEEKSESDEATPDKLEGDEISKTEGEPKK 1712
Query: 359 ELSEIEGAKKESSARKF--FDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFT 416
+L++ EG + +SSA + DE PD S E N+ D M D K D
Sbjct: 1713 DLTDTEGKQLDSSAMEVDSKDESEPDDSKKSDEDNKDKDKME----VDDEAEKSD----K 1764
Query: 417 ESLPHVDEQTMHRFSELKERHPVEAREVLEGLQEK 451
ES P +T+ K ++ VL G Q K
Sbjct: 1765 ESKPEEQSETVKTEENSKAAEEDKSSTVLTGDQAK 1799
>gi|169627314|ref|YP_001700963.1| hypothetical protein MAB_0209 [Mycobacterium abscessus ATCC 19977]
gi|169239281|emb|CAM60309.1| Hypothetical protein MAB_0209 [Mycobacterium abscessus]
Length = 1144
Score = 43.7 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 69/410 (16%), Positives = 127/410 (30%), Gaps = 60/410 (14%)
Query: 8 DEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGS 67
++D+ D Q+P+ PD + + A+ L D N + +
Sbjct: 555 EQDLSDQ-----QQPQ-GPD-------TQALAQDGAQLGQSLPGDIANTVSDSVNLGQSA 601
Query: 68 RTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGA-L 126
+ + G+ A AGA+LA S P+ +A + S ++ A
Sbjct: 602 GSAAQNFGSAAQ------------AGASLASSAQSGAVNPMDAVALVQGVSGGISDTADA 649
Query: 127 YAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVL 186
+ A + ++ +G + ADA +A L + VA G V
Sbjct: 650 VGSGASIASTWLNEAGQG-AQLAADANPQLKAEAEQVRQLTQAGSQVADLTGKVA-GGVS 707
Query: 187 NVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLR 246
V GMV ++ L G PD + + + G S
Sbjct: 708 QVS-GMVN---TASSLGTSGMPDTSGATDALSGTATAVN---GPGDVPKPPTPPSVPSQS 760
Query: 247 LVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKL 306
+ T + + S+P + A+ + + + L + L
Sbjct: 761 PSSVQALDSTTTRAPQQPPQPSNPSTPKT-----ANQSSTSKPLSPL-EASTFPAPLQAL 814
Query: 307 QTIADNTLEDP------------HFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRK 354
T + DP P P Q + + + E+ +
Sbjct: 815 NTAQAASTPDPNAGRLSSMPGVRDVSQPPLRPAPTLQPDQVDAFRAITRQNLENQNVPAD 874
Query: 355 EVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTD 404
++E+ +++ A K++ +F PD P + Q LD G F D
Sbjct: 875 QIEQRVND---AVKQAQTPRFM----PDPQPMRTPGAQPLDRPLGDKFND 917
>gi|301097660|ref|XP_002897924.1| abnormal spindle-like microcephaly-associated protein [Phytophthora
infestans T30-4]
gi|262106369|gb|EEY64421.1| abnormal spindle-like microcephaly-associated protein [Phytophthora
infestans T30-4]
Length = 2036
Score = 43.7 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 11/143 (7%)
Query: 257 ERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLED 316
E LP G + ++ T D+++ + + R + + TI
Sbjct: 247 EPLPSDVGKEVAATLKFTVNDSFKLQCRATGFVMPRVARLAKFGKAKAPVDTIVVAPRAK 306
Query: 317 PHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFF 376
PH P +PE + + + A P+++ V R + G + S A +F
Sbjct: 307 PHRLPRIPEESTRQGSRSTA----LAAQTAREGEPEQEPVVRPGPVVGGKRPSSVAIEF- 361
Query: 377 DEGSPDHSPFKGERNQKLDPMRG 399
SP P G + +K +P R
Sbjct: 362 ---SP---PRNGPKRRKCEPPRA 378
>gi|193700114|ref|XP_001942665.1| PREDICTED: leucine-rich repeat-containing protein 4B-like
[Acyrthosiphon pisum]
Length = 669
Score = 43.7 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 74/256 (28%), Gaps = 18/256 (7%)
Query: 134 AESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVP--FG 191
+ + + + + A A + A V A+ TV S + V +G
Sbjct: 414 SSTRSDGKPQHLVTTAASATSNGTAAVVVQVKQPVAGQATSPATTTVVSSMAVAVGGPYG 473
Query: 192 MVERGWSSKVLED---HGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLV 248
++ G+ + G A+ S TD FG L
Sbjct: 474 GLDAGFDQATATEPVVGGVRRPAK----LTELSFATDHYDSGGFGHGGVLDAGRTVLYRS 529
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQT 308
+ P +H +S PG S + H R T
Sbjct: 530 QPSNPDLIVDAPEQHSPQSQPPGAAHS----QHHQQARRSASGEYRRTADDSLYSPGFWT 585
Query: 309 IADNTLED--PHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGA 366
+D D P + P P S R+ +A P PK + ++
Sbjct: 586 PSDAAATDRTPIIEKSPPLPAQ-SVAAVCSARETVM--VAAAPDPKAASLRVWKHGVQVM 642
Query: 367 KKESSARKFFDEGSPD 382
S+ ++ ++GSPD
Sbjct: 643 PPLSALKRALNKGSPD 658
>gi|224088128|ref|XP_002308334.1| calcium dependent protein kinase 26 [Populus trichocarpa]
gi|222854310|gb|EEE91857.1| calcium dependent protein kinase 26 [Populus trichocarpa]
Length = 613
Score = 43.4 bits (100), Expect = 0.074, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 28/67 (41%)
Query: 304 EKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEI 363
E + ++ N +++P F PE + KE Q PS P + E+ E+ E
Sbjct: 40 ENVDGLSLNRVQEPPFHAQNKPPEQMKIAKEEIINQVPSPPKPKENATVASEIIMEVEES 99
Query: 364 EGAKKES 370
AK S
Sbjct: 100 RPAKPAS 106
>gi|145595902|ref|YP_001160199.1| hypothetical protein Strop_3388 [Salinispora tropica CNB-440]
gi|145305239|gb|ABP55821.1| hypothetical protein Strop_3388 [Salinispora tropica CNB-440]
Length = 706
Score = 43.4 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 79/266 (29%), Gaps = 44/266 (16%)
Query: 51 APFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTR 110
APF T QP G TG E +T + + A A ++ +
Sbjct: 113 APFYRATPAQP---LGVVRRRMIQSTG----ERVTGIEDDLLDPAAASPEMTTVGD--GA 163
Query: 111 LAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGA 170
L Q+ + A + + + +I GV T + T+ L A
Sbjct: 164 LLAALSQATGRGMRDIVATIQREQDEAIRSPGSGV---TVVSGGPGTG--KTAVALHRAA 218
Query: 171 IASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGA 230
+ A G +L V V + VL G E T +G
Sbjct: 219 YLLYTDRSRYAGGGILVVGPSAVFVEYIGSVLPSLG-------------EETATLAALGG 265
Query: 231 FFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGV 290
F G+ + + + +K + R + + ++PG
Sbjct: 266 LFPGVTATRTDPAEVAA---VKGSLRMRRVLERAARDTAPGAPDELR------------- 309
Query: 291 DSLVRGEYPHFDQEKLQTIADNTLED 316
L RGE D+ +L I D L
Sbjct: 310 -LLYRGELLRVDRRELNAIRDRALRR 334
>gi|302528120|ref|ZP_07280462.1| predicted protein [Streptomyces sp. AA4]
gi|302437015|gb|EFL08831.1| predicted protein [Streptomyces sp. AA4]
Length = 641
Score = 43.4 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 55/324 (16%), Positives = 95/324 (29%), Gaps = 35/324 (10%)
Query: 3 FNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPN 62
++ VS++D RD +++ + + L P ++ L T+D N
Sbjct: 99 WHQVSEKDARDGVRDDKYSFAIGIPHDFSKALLSSGNFEPQQATITL------TTNDANN 152
Query: 63 YYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLA 122
Y G+ + + + G+ A K L T +++ + LA
Sbjct: 153 YLAGT--------IAKQVADQVRKTIAEKVGSEAADKFLVGFSTIYGKISEATDGAKQLA 204
Query: 123 AGAL-----------YAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAI 171
GA A SS+ + + TA + + + + +A G
Sbjct: 205 DGAAKLQTGQHQLADGAGQLATGSSSLATGLGTLKSSTAQLPSQTQKLADGAGQVADGNQ 264
Query: 172 ASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAF 231
+ AS + R + L D G D + D L
Sbjct: 265 KVADASSLAASASSDLQGRLDSYRSQLNTQLHDAGLSD-----SQVNDILSRLDQLRSPV 319
Query: 232 FGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVD 291
Q N L L G + H + S+SP L + L G
Sbjct: 320 NDANGKIQSANGDL---QKLASGARQVSDGAHQLASASPQLANGIAQASDGANQLRDGAA 376
Query: 292 SLVRGEYPHFDQEKLQTIADNTLE 315
L GE +AD + +
Sbjct: 377 KLNDGEKTAV--TGTDQLADGSAK 398
>gi|194288752|ref|YP_002004659.1| replication/virulence associated protein; ATP-dependent protease
clpa/b chaperone motif [Cupriavidus taiwanensis LMG
19424]
gi|193222587|emb|CAQ68590.1| replication/virulence associated protein; putative ATP-dependent
protease, clpA/B chaperone motif [Cupriavidus
taiwanensis LMG 19424]
Length = 912
Score = 43.4 bits (100), Expect = 0.094, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 132/431 (30%), Gaps = 62/431 (14%)
Query: 51 APFREETHDQPNYYRGSRTDP-----HSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIP 105
+ D R R DP H + T ++ P + G A GK
Sbjct: 189 SALGRYCRDLTEAARAGRLDPVIGREHEIRTMTDILLRRRQNNPLLTGEAGVGKTAVIEG 248
Query: 106 TPLTRLAGLA------LQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAI 159
L AG ++ L GAL A S K E +GV +E A + A
Sbjct: 249 LALAVAAGEVPPSLKDVRLLSLDVGALLAGASMKGEFEARL--KGVLEEAAKSPAPVILF 306
Query: 160 VHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGY----PDMAQHYR 215
V L Q+ A+ + G++ ++ E + P + + ++
Sbjct: 307 VDEVHTLVGA--GGQAGTGDAANLLKPALARGVLRTIGATTWSEYKRHIEKDPALTRRFQ 364
Query: 216 IFD----MESLITDGLIGAF--FGGMHSKQVQNMSLRLV-------------NDLKEGIT 256
+ E+ + G F H +++ ++R D +
Sbjct: 365 VLQVMEPDEARAVAMVRGLVRTFEAHHGVLIRDEAVRAAVRLSHRFIPSRQLPDKAISLL 424
Query: 257 ERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYP--HFDQEKLQTIADNTL 314
+ + G+ +P H A +L+ E D ++ +A
Sbjct: 425 DTACARVGLSLHAPPAEVEHLR---HELAAADAESTLLARESGLGRPDAARI-GLARARR 480
Query: 315 EDPHFKPHLPE---PEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESS 371
E L + R+ A P +R L+E+EG +
Sbjct: 481 EQLEADLALATARWERVRGLANDLVTRRHALVQSAPDASPLAAPAQRILAELEGQLHAAQ 540
Query: 372 ARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKF--DATTFTESLPHV-DEQTM- 427
A D E ++++ AD+T P + D T LP + E+ +
Sbjct: 541 A---------DAPLVYTEVDERVVAAIVADWTGIPVGRMVADEVTTVMQLPQILGERVIG 591
Query: 428 --HRFSELKER 436
H S++ ER
Sbjct: 592 QGHALSQIGER 602
>gi|116669229|ref|YP_830162.1| ABC-2 type transporter [Arthrobacter sp. FB24]
gi|116609338|gb|ABK02062.1| ABC-2 type transporter [Arthrobacter sp. FB24]
Length = 678
Score = 43.4 bits (100), Expect = 0.095, Method: Composition-based stats.
Identities = 56/336 (16%), Positives = 110/336 (32%), Gaps = 48/336 (14%)
Query: 6 VSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINM--PARSLDKLVAP----------F 53
V+D I ++ W Q + GK + P LV+P
Sbjct: 77 VADSLIDGHVFNW-QSVDSAEQADQGVSSGKYAFALKIPKDFSANLVSPGSFDAANQAML 135
Query: 54 REETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAG 113
T+D NY + D + + + + + G A +LL+ T T++
Sbjct: 136 NVTTNDANNYLLSTIVDKLTTAVHSSVAKEV--------GEETANQLLTGFGTIHTQMVK 187
Query: 114 LALQSAPLAAG---------------ALYAYLSHKAESSIHHQIEGVDKETADALAWREA 158
A + L+ G + + + + + +G ++ A +
Sbjct: 188 AADGAGQLSDGVSKLHDGTVTLHEGTSQLSSGAGELYNGQLKLRDGANQLNDGAAQLSDG 247
Query: 159 IVH----TSALLAPGAIASQSIAKTVASGAVLNVP-------FGMVERGWSSKVLEDHGY 207
+ T++L A + A+ A A LN ++G ++V+E +G
Sbjct: 248 LSQLQDKTASLPADSQKLADGAAQVAAGNATLNTKVQDVVGQLDAADQGLRNRVVESNGR 307
Query: 208 PDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQ-NMSLRLVNDLKEGITERLPYKHGVK 266
A +S++ D A G + + + + L +G + +
Sbjct: 308 LMAAGIITQAQADSILKDFDAAAASGPVADAKAKIQSDAAQIQQLSDGSSAVSAGAARLA 367
Query: 267 SSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFD 302
+++P L + A D L G +L GE D
Sbjct: 368 AATPALTGAIAQASAGADQLHTGTSALAAGEQSAVD 403
>gi|320038570|gb|EFW20505.1| serine/threonine-protein kinase prp4 [Coccidioides posadasii str.
Silveira]
Length = 580
Score = 43.0 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 17/183 (9%)
Query: 265 VKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLP 324
++ +P A + + RG+ + LQT + +
Sbjct: 23 MEDETPSEPVDEAALIEQRRRRREAIKAKYRGQATPLLVQALQTGNETGSTACDASEAVS 82
Query: 325 EP-------EPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFD 377
+P P + S Q P++ + S +E K+E+SA
Sbjct: 83 KPDLSGRQGSPTNTLDDTSTAQSPTDLHVSRDEDLANTDLQSRSGLE--KEEASA----- 135
Query: 378 EGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLPHVDEQTMHRFSELKERH 437
D+ P R +K+ + D P + +D T T V E T +++K +
Sbjct: 136 ---ADYDPTADMRQEKMKHDKRHFGEDMPASAYDETKVTRQEVLVPEPTAADPNQMKAKD 192
Query: 438 PVE 440
P +
Sbjct: 193 PFD 195
>gi|332358977|gb|EGJ36798.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus sanguinis SK49]
Length = 907
Score = 42.6 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 21/199 (10%)
Query: 192 MVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDL 251
+ E+ S VL++ Y + + L +D +G G + + D
Sbjct: 144 LTEKAGSRSVLKNKTYKIVG----FVNSAELWSDRNLGNATSGSGALSAYAVVSPKAFDT 199
Query: 252 KEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIAD 311
RL Y H ++ +P + + E H L ++ + + + TI
Sbjct: 200 DVYSIARLRY-HDLEKLAPFSESYQERLEQHQTALDKSLEDNGAARFKRLEADAKSTIQK 258
Query: 312 NTLEDPHFKPHLPE-PEPLPQYKEHSDRQKPSEPLAEHPH--PKRK-------------E 355
+ + L + + L Q + D+QK A+ P + +
Sbjct: 259 GQDKIAQAESELTQGKKQLEQAESQLDQQKSQLAAAQSASILPPAQLSQSQQQIQEAEFQ 318
Query: 356 VERELSEIEGAKKESSARK 374
+ ++ +E+ A+K+ SA K
Sbjct: 319 LNQKKAELAQAEKDLSASK 337
>gi|7509604|pir||T26656 hypothetical protein Y38E10A.f - Caenorhabditis elegans
Length = 1384
Score = 42.6 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Query: 286 LAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPL 345
+ + S + E ++++ I ++ + E + +P+ E + P +P
Sbjct: 950 IDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKA----PEKPQ 1005
Query: 346 AEHPHPKRKEVERELSEIEGAKKESSARK--------FFDEGSPDHSP 385
PK+ E +E+ EI +++S ++ FF +P +P
Sbjct: 1006 EIEKSPKKSEKRQEIQEIPQKSEKTSEKRPEIEELPTFFKSSAPAQTP 1053
>gi|126698700|ref|YP_001087597.1| putative DNA-repair protein [Clostridium difficile 630]
gi|115250137|emb|CAJ67958.1| putative conjugative transposon protein Tn1549-like, CTn4-Orf11
[Clostridium difficile]
Length = 646
Score = 42.6 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 8/167 (4%)
Query: 234 GMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSS-PGLHTSFDAYEAHTDTLAHGVDS 292
H+++ ++ + T + + + P L T E D L +
Sbjct: 45 AAHTRKANKKEVKKEQEATALRTSTSRLQFTDEERATPELETYIKKSEKAADQLDAAKAA 104
Query: 293 LVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPK 352
+ + + + A F+ +P+P K+ + +P++ H K
Sbjct: 105 IPKQKKL-VKERTFDEAAGKAKTRLRFEEQ---EKPIPGGKKGNPLSRPAQEAGIFVHNK 160
Query: 353 RKEVERELSEIEGA-KKESSARKFFDEGSPDHSPFKGERNQKLDPMR 398
VE++ S +EGA K E A + G+ +G R+ KL P R
Sbjct: 161 IHSVEKDNSGVEGAHKSEELAERGAKYGARKLK--QGYRSHKLKPYR 205
>gi|325107016|ref|YP_004268084.1| hypothetical protein Plabr_0435 [Planctomyces brasiliensis DSM
5305]
gi|324967284|gb|ADY58062.1| hypothetical protein Plabr_0435 [Planctomyces brasiliensis DSM
5305]
Length = 407
Score = 42.6 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 49/165 (29%), Gaps = 27/165 (16%)
Query: 270 PGLHTSFDAYEAHTDTLAHGVDSLVRGEYP-------------HFDQEKLQTIADNTL-E 315
PG+ A + S E + + E A +
Sbjct: 141 PGIPLDPHASKFQQQCDRAARKSNRWAEQIWHSVPGVPCNDKCNCEPESFAAAAPAIRGQ 200
Query: 316 DPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKF 375
P P LP P Q + E P P +++ +++ + E A+ F
Sbjct: 201 SPEVGPELPPLTPAQQAEWEKALLGVLNLEEESPTPAAPVARKDVRDLKATEAE-LAQSF 259
Query: 376 FDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP 420
+P SP ++Q + P + P + DA E P
Sbjct: 260 ---PAPAPSP----QDQNVKP-----YQPPPQPRLDAPANLEEAP 292
>gi|108761607|ref|YP_635052.1| putative methyl-accepting chemotaxis protein [Myxococcus xanthus DK
1622]
gi|108465487|gb|ABF90672.1| putative methyl-accepting chemotaxis protein [Myxococcus xanthus DK
1622]
Length = 591
Score = 42.6 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 88/247 (35%), Gaps = 34/247 (13%)
Query: 209 DMAQHYRIFDMESLITDGLIGAFFGGMH--SKQVQNMSLRLVNDLKEGITERLP--YKHG 264
A H S++ A G + S L ++ D+ G+ E++ +
Sbjct: 360 QQASHVTHSRATSILQVAERAAAVGKLGEESLAGTEKGLTVIRDIAAGLHEQMLDLEQRA 419
Query: 265 VKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEY---PHFDQEKLQTIADNTLEDPHFKP 321
+ A ++H + +++ GE+ +++ +AD ++ +
Sbjct: 420 REVGRVSEVVKSLADQSHMLAINAAIEATRAGEHGKGFGVVARQMRDLADQSVRATNQVR 479
Query: 322 HLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSA--RKFFDEG 379
L E + + + +AE P R ER L E+ G KES+A R+ +
Sbjct: 480 GLLESMATATQHATAMSDQGAAGVAEALEPLRHSGER-LRELAGLSKESAAAVRQITEAV 538
Query: 380 SPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLPHVD---------EQTMHRF 430
S H+ G D A + D T T++L H+D +
Sbjct: 539 SQQHA--------------GVDQLFAAVRELDELT-TDTLRHLDTTQQAASAVSHATGQV 583
Query: 431 SELKERH 437
S+L ER+
Sbjct: 584 SQLAERY 590
>gi|157126450|ref|XP_001654627.1| hypothetical protein AaeL_AAEL010525 [Aedes aegypti]
gi|108873265|gb|EAT37490.1| hypothetical protein AaeL_AAEL010525 [Aedes aegypti]
Length = 986
Score = 42.2 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 13/141 (9%)
Query: 253 EGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADN 312
+ + P P + E H D VDS ++E
Sbjct: 361 DSADDMEPLDQTEDDDEPE-----ETAEGHEDVPEQEVDSEN---DTSMNEETTDITEPA 412
Query: 313 TLEDPHFKPHLPEPEPLPQYKEHS----DRQKPSEPLAEHPHPKRKEVERELSEIEGAKK 368
+ + +P E P ++ + + +P+E P + E+E + +E
Sbjct: 413 AMVETLLEPEPENDESEPTERDKAPDKDVQSEPAEEAEHTAEPTAEGQEQEQTMVEIPDD 472
Query: 369 ESS-ARKFFDEGSPDHSPFKG 388
SS + + F+E PD P G
Sbjct: 473 NSSFSCEMFEEIGPDEEPANG 493
>gi|71998068|ref|NP_001022429.1| hypothetical protein Y38E10A.6 [Caenorhabditis elegans]
gi|34556124|emb|CAE46683.1| C. elegans protein Y38E10A.6b, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 1345
Score = 42.2 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Query: 286 LAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPL 345
+ + S + E ++++ I ++ + E + +P+ E + P +P
Sbjct: 911 IDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKA----PEKPQ 966
Query: 346 AEHPHPKRKEVERELSEIEGAKKESSARK--------FFDEGSPDHSP 385
PK+ E +E+ EI +++S ++ FF +P +P
Sbjct: 967 EIEKSPKKSEKRQEIQEIPQKSEKTSEKRPEIEELPTFFKSSAPAQTP 1014
>gi|56414508|ref|YP_151583.1| DNA transfer protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197363430|ref|YP_002143067.1| DNA transfer protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|56128765|gb|AAV78271.1| DNA transfer protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197094907|emb|CAR60444.1| DNA transfer protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 643
Score = 42.2 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 64/224 (28%), Gaps = 14/224 (6%)
Query: 66 GSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLA--- 122
GS D + G A + TS+ P G + GL LA
Sbjct: 22 GSAIDEYFSGQSAQQEQQGTSMTPGSQPQQQGGFISDLGNAAAETGRGLLQAGVNLANIP 81
Query: 123 ---AGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKT 179
A A+ + + + + V L P + ++
Sbjct: 82 ASMADAVASAGAWAGQKLGIGDGTYQPAPRVTTQGLEQGFVLQQGALTPQTTEGKIFSEA 141
Query: 180 VASGAVLNV------PFGMVER--GWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAF 231
+ + V + R +S++L ++ +A + + E+L TD G
Sbjct: 142 LPYLTPVGVERIAAQAPSIAGRVAQGASRLLAENAVGSLAANSERDNPEALATDLGTGVA 201
Query: 232 FGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTS 275
GG +K + E ++ LHT+
Sbjct: 202 LGGAINKLGRAAGAAYRGIRGTIAPEAQQAIQFANAADVPLHTT 245
>gi|119947101|ref|YP_944781.1| DNA-directed RNA polymerase subunit alpha [Psychromonas ingrahamii
37]
gi|158513126|sp|A1T0B7|RPOA2_PSYIN RecName: Full=DNA-directed RNA polymerase subunit alpha 2;
Short=RNAP subunit alpha 2; AltName: Full=RNA polymerase
subunit alpha 2; AltName: Full=Transcriptase subunit
alpha 2
gi|119865705|gb|ABM05182.1| DNA-directed RNA polymerase, alpha subunit [Psychromonas ingrahamii
37]
Length = 328
Score = 42.2 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 2/130 (1%)
Query: 236 HSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVR 295
H +S+R+ + G H + P DA + + +A+ V+S
Sbjct: 132 HLTGNAEISMRIKIESGRGYVPASSRIHTEEDERPIGRLLVDATFSPVERIAYSVESARV 191
Query: 296 GEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKE 355
+ D+ + D TL+ P Q D +K SEP+A+ P+
Sbjct: 192 EQRTDLDKLVIDMETDGTLD-PEEAIRRAATILAEQLDAFVDLRKVSEPVAKEEKPEFDP 250
Query: 356 V-ERELSEIE 364
+ R + ++E
Sbjct: 251 ILLRPVDDLE 260
>gi|71998064|ref|NP_001022428.1| hypothetical protein Y38E10A.6 [Caenorhabditis elegans]
gi|34556123|emb|CAB60334.3| C. elegans protein Y38E10A.6a, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 1343
Score = 42.2 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Query: 286 LAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPL 345
+ + S + E ++++ I ++ + E + +P+ E + P +P
Sbjct: 909 IDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKA----PEKPQ 964
Query: 346 AEHPHPKRKEVERELSEIEGAKKESSARK--------FFDEGSPDHSP 385
PK+ E +E+ EI +++S ++ FF +P +P
Sbjct: 965 EIEKSPKKSEKRQEIQEIPQKSEKTSEKRPEIEELPTFFKSSAPAQTP 1012
>gi|189197597|ref|XP_001935136.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981084|gb|EDU47710.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 577
Score = 42.2 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 45/123 (36%), Gaps = 24/123 (19%)
Query: 281 AHTDTLAH------GVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKE 334
AH L H G V E FD ++ LED K + E LP +
Sbjct: 3 AHARRLEHSLGSSWGEADYVSDEGGSFDSGS-DGASELDLEDSD-KEVVQERRALPTPRR 60
Query: 335 HSDRQKPSEPLAEH-PHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQK 393
H ++Q P P A+ P RK ER KK S ++ HS KG R
Sbjct: 61 HRNQQSPPVPTAQTKSTPVRKPTER--------KKTSQSQHL-------HSDKKGPRQHP 105
Query: 394 LDP 396
+P
Sbjct: 106 FEP 108
>gi|26553757|ref|NP_757691.1| ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2]
gi|26453764|dbj|BAC44095.1| ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2]
Length = 678
Score = 41.8 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 30/165 (18%)
Query: 297 EYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEV 356
E F+ K ++ ++ P KP P P ++KP + A P+ KEV
Sbjct: 128 EKYLFEPFKGPSLFKEEVKKPE-KPTKPAKVSKPV---EPVKEKPVKAKAADKKPEVKEV 183
Query: 357 ERELSEIEGAK------------------KESSARKFFDEGSPDHSPFKG-----ERNQK 393
+ + K ++F D+ + PFKG E K
Sbjct: 184 KPAKPKKLKETKEKKLKSKFLYIPYIKLVKGEEVKQFSDDNKFLYEPFKGPSLYDESANK 243
Query: 394 LDPMRGADFTDAPHAKFDATTFTESLPHVDEQTMHRFSELKERHP 438
++P+ F D K D +E P D++ ++ E KE +P
Sbjct: 244 VEPLPKEIFLDDSF-KDDEVPLSEEKPTKDKK--YKLEETKEDYP 285
>gi|158302482|ref|XP_322022.4| AGAP001140-PA [Anopheles gambiae str. PEST]
gi|157012974|gb|EAA01427.5| AGAP001140-PA [Anopheles gambiae str. PEST]
Length = 1702
Score = 41.8 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 74/217 (34%), Gaps = 26/217 (11%)
Query: 238 KQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDT---LAHGVDSLV 294
+ + + + E ++ER+ K P EA + D
Sbjct: 14 SNAEPSAAQSEPVMSEAVSERMDVDDAGKEDVPAEAKEPLHEEASAVAERPVNSKPDDKD 73
Query: 295 RGEYPHFDQEKLQTIAD---NTLEDPHFKPHLPEP---------EPLPQYKEHSDRQKPS 342
GE +D + D + ++P + +P +P+ +EH +Q+
Sbjct: 74 DGESEKYDSAVEEMETDQPGDQDQNPTEESESKKPVAANTTSVDDPMKVDEEHEHQQQVV 133
Query: 343 EPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADF 402
+PL + + + E++ ++ ES + D D S D +R A
Sbjct: 134 KPLDDVSNTSSHLQDIEVTNVD----ESDHTRGDDMPEGDRSIDPSTAEDPFDQLRHAST 189
Query: 403 TDAPHAKFDATTFTES-LPHVDEQTMHRFSELKERHP 438
D H D T + + VD+Q EL + HP
Sbjct: 190 DDISHGDKDNQNETATEMEGVDKQ------ELPDEHP 220
>gi|194754609|ref|XP_001959587.1| GF11968 [Drosophila ananassae]
gi|190620885|gb|EDV36409.1| GF11968 [Drosophila ananassae]
Length = 972
Score = 41.8 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 84/230 (36%), Gaps = 20/230 (8%)
Query: 255 ITERLPYKHGVKSSSPGLHTSFDAYEAHTDT--LAHGVDSLVRGEYPHFDQEKLQTIADN 312
T+ H HT+ D EAH L + E H L+
Sbjct: 744 ATDLEEAHHPAPDLEEAHHTAPDLEEAHHPAPDLEEAHHTAPDLEEAHHTAPDLEEAHHP 803
Query: 313 TLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSA 372
+ +P P+ E + + E + + P A HP P +EV ++E A
Sbjct: 804 ATDLEEAQPPAPDLEEVTRLLEEAHPRAPDLEEAHHPAPDLEEVLHPAPDLE------EA 857
Query: 373 RKFFDEGSPDHSPFKGERNQKLDPMRGADFT--DAPHAKFDATTFTESLPHV-DEQTMHR 429
+ +EG P +P E + + A T D A AT E+ P D + + R
Sbjct: 858 TRLLEEGYP-RAPDLEEAHHTAPDLEEAHHTAPDLEEAHHPATDLEEAQPPAPDLEEVTR 916
Query: 430 FSELKERHP-----VEAREVLEGLQEKLQGTKEIKTKS-LIKEAINCFLR 473
L+E HP EA L+E L +++ + L++EA F R
Sbjct: 917 L--LEEAHPRAPDLEEAHHPAPDLEEVLHPAPDLEEATRLLEEATKLFGR 964
>gi|17986031|ref|NP_523441.1| kismet, isoform A [Drosophila melanogaster]
gi|7230509|gb|AAF43004.1|AF215703_1 KISMET-L long isoform [Drosophila melanogaster]
gi|22945599|gb|AAF51527.3| kismet, isoform A [Drosophila melanogaster]
Length = 5322
Score = 41.8 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 73/206 (35%), Gaps = 17/206 (8%)
Query: 259 LPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDS------LVRGEYPHFDQEKLQTIADN 312
L +++SS + + TD + S + G+ + + +
Sbjct: 1597 LDESSQLEASSSTSAVAEKERQISTDAANAAMSSKPNYVYINTGDEDSMVVQLVLAMRMG 1656
Query: 313 TLEDPHFKPHLPEPEPLP-QYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESS 371
E KP PEP + K D +P + E +++L++ E K ESS
Sbjct: 1657 KRELILDKPKEKAPEPKQDEEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESS 1716
Query: 372 ARKF--FDEGSPDHSPFKGERNQKLDPMR------GADFTDAPHAKFDATTFTESLPHVD 423
A + +E PD S E N+ D M +D P + + E+ ++
Sbjct: 1717 AMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIE 1776
Query: 424 EQTMHRFSELKERHPVEAREVLEGLQ 449
E + L H E VLE ++
Sbjct: 1777 EDKSS--TVLTADHAKEPETVLEKME 1800
>gi|326480010|gb|EGE04020.1| GRAM domain-containing protein YSP2 [Trichophyton equinum CBS
127.97]
Length = 1254
Score = 41.4 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 84/274 (30%), Gaps = 20/274 (7%)
Query: 15 IKEWAQRPRVSPDI---KWHTGLGKEVINMPARSLDKLVAPFREETH----DQPNYYRGS 67
+ ++ P+ ++ G +++ + L + + Q G
Sbjct: 381 VSPASEDPKSQGKPSTSQFGAGFFSSMVSAAQNAATTLSSSLNPQAKGSKTSQEQNPEGD 440
Query: 68 RTDPHSVGTGAHLVEGLTSLAP-------YIAGAALAGKLLSFIPTP-LTRLAGLALQSA 119
D A G ++AP + S + L + AG +
Sbjct: 441 TRDSGEQEKPAATPGGEENVAPQDGKKELAVNTLGTGDLDFSHLGLEHLEKAAGDDEGNK 500
Query: 120 PLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS---I 176
AG A + + ++E V A ++A+ V + ++ +
Sbjct: 501 LDVAGRPRAKTAVSQRDELAARMEDVRAARAVSMAYGNTPVTPIVTVDGINADNRPANPL 560
Query: 177 AKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH 236
V A N P G +++ L+ +G + R + T+ IGA G
Sbjct: 561 NTVVRDNAGENTPPGGSVHSETAESLKQNGSLRSRRARRDRGSSAATTNTTIGAPIGT-- 618
Query: 237 SKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSP 270
+ +N S+ + +R H + S P
Sbjct: 619 NLTARNTSVPRLTGFAVASKKRNRDFHSLFRSVP 652
>gi|326468510|gb|EGD92519.1| GRAM domain-containing protein [Trichophyton tonsurans CBS 112818]
Length = 1254
Score = 41.4 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 84/274 (30%), Gaps = 20/274 (7%)
Query: 15 IKEWAQRPRVSPDI---KWHTGLGKEVINMPARSLDKLVAPFREETH----DQPNYYRGS 67
+ ++ P+ ++ G +++ + L + + Q G
Sbjct: 381 VSPASEDPKSQGKPSTSQFGAGFFSSMVSAAQNAATTLSSSLNPQAKGSKTSQEQNPEGD 440
Query: 68 RTDPHSVGTGAHLVEGLTSLAP-------YIAGAALAGKLLSFIPTP-LTRLAGLALQSA 119
D A G ++AP + S + L + AG +
Sbjct: 441 TRDSGEQEKPAATPGGEENVAPQDGKKELAVNTLGTGDLDFSHLGLEHLEKAAGDDEGNK 500
Query: 120 PLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS---I 176
AG A + + ++E V A ++A+ V + ++ +
Sbjct: 501 LDVAGRPRAKTAVSQRDELAARMEDVRAARAVSMAYGNTPVTPIVTVDGINADNRPANPL 560
Query: 177 AKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMH 236
V A N P G +++ L+ +G + R + T+ IGA G
Sbjct: 561 NTVVRDNAGENTPPGGSVHSETAESLKQNGSLRSRRARRDRGSSAATTNTTIGAPIGT-- 618
Query: 237 SKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSP 270
+ +N S+ + +R H + S P
Sbjct: 619 NLTARNTSVPRLTGFAVASKKRNRDFHSLFRSVP 652
>gi|269216177|ref|ZP_06160031.1| ATP synthase F1, alpha subunit [Slackia exigua ATCC 700122]
gi|269130436|gb|EEZ61514.1| ATP synthase F1, alpha subunit [Slackia exigua ATCC 700122]
Length = 522
Score = 41.4 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 90/293 (30%), Gaps = 55/293 (18%)
Query: 45 SLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFI 104
+ E Q S D VGT + +G+ + A+AG+LL FI
Sbjct: 3 VTEITAKSIDEALRKQLEDLETS-VDAREVGTVVQVGDGIARIDGLKG--AMAGELLEFI 59
Query: 105 PTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSA 164
+ GLA GA+ + + G E + +V+
Sbjct: 60 GADGRTVYGLAQNLEEEEVGAVLMGDVTAIRENDQVRTTGRIMEVPSGKSLLGRVVNPLG 119
Query: 165 L------------------LAPGAIASQSIAKTVASGAV---LNVPFGMVERGWSSKVLE 203
+ APG I + + + + +G V +P G +R
Sbjct: 120 MPIDGKGPIKAEGMRPVEFKAPGVIHRKPVHEPMQTGIVAVDTMIPIGRGQR-------- 171
Query: 204 DHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNM---------SLRLVNDLKEG 254
++ R ++ D +I +++ ++M V ++ E
Sbjct: 172 -----ELIIGDRQTGKTAIAIDAII--------NQKGKDMICIYVAVGQKASTVANVMET 218
Query: 255 ITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEY-PHFDQEKL 306
+ + ++ + S+ ++ Y A A G + GE E L
Sbjct: 219 LEKHGAMEYTIIVSATASDSAPLQYIAPMAGAAMGEHFVYTGEDGKPAGPENL 271
>gi|240953833|ref|XP_002399696.1| condensin-2 complex subunit H2, putative [Ixodes scapularis]
gi|215490611|gb|EEC00254.1| condensin-2 complex subunit H2, putative [Ixodes scapularis]
Length = 704
Score = 41.4 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 54/288 (18%), Positives = 82/288 (28%), Gaps = 43/288 (14%)
Query: 160 VHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLED-HGYPDM---AQHYR 215
+A L G+ + V + M RG + + ED G A H R
Sbjct: 73 FTEAAFLIQGSASVYGKKVEYLYSLVQKLASEMTHRGNTGETGEDAQGVAKTGAGASHRR 132
Query: 216 IFD-MESLITDGLIGA----FFGGMHSKQVQNMSLRL----------------VNDLKEG 254
D SL D +G GG + + L+ L
Sbjct: 133 KADYGFSLQEDMGLGENLDDAVGGRTGRAGRKTRLKRQRRLPLQLVLFEEDKQTRLLDVK 192
Query: 255 ITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTL 314
+ PG D H +L E D +
Sbjct: 193 GDVVGHQSDYMLHELPGCSCGPDRCRCHRTSLETQRRLDDSDEVSMADPADFDRGCPSIS 252
Query: 315 EDPHFKPHLPEPEPLPQY---KEHSDRQ--------KPSEPLAEHPHPKRKEVERELSEI 363
+D H LPE + ++ + +P P P+ V R + E
Sbjct: 253 DDSHLSGQLPELDISGLGALHEDVGAFEECRAKPDVEPESEPTPVPLPRNSSVGRRIKEE 312
Query: 364 EGAKKESS--ARKFFD---EGSPDHSPFKGERNQKLDPMRGADFTDAP 406
KKE KF+D + S + P K R + P++ +D D P
Sbjct: 313 NRVKKEDIILVHKFYDPMEDTSALNKPIKIMRRARKRPLKESD--DVP 358
>gi|254884948|ref|ZP_05257658.1| predicted protein [Bacteroides sp. 4_3_47FAA]
gi|254837741|gb|EET18050.1| predicted protein [Bacteroides sp. 4_3_47FAA]
Length = 1419
Score = 41.4 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 47/315 (14%), Positives = 89/315 (28%), Gaps = 44/315 (13%)
Query: 71 PHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYL 130
+ + ++ T + IA A LS + L + +S G + A L
Sbjct: 936 TNVDKSSKKAIDNTTGVTNAIAQLGEADVSLSSFGDSVGSLVDVLSESGSKIGGIIAAIL 995
Query: 131 SHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPF 190
+ + + V I T + F
Sbjct: 996 AILDQIGDQGLDKFVGNILETVSNAVGGIFDTVGSI-----------------------F 1032
Query: 191 GMVERGWSSKVLEDHGYPDMAQHY----RIFDMESLITDGLIGAFFGGMHSKQVQ---NM 243
G+ G + GY +M Y I+D I +G SK + N+
Sbjct: 1033 GIKGAGGIFHGADYSGYNEMVAQYDNLLDIWDELLDKKKAYINESYGAEASKAGEEALNI 1092
Query: 244 SLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVR-------- 295
+ ++ K+ RL + S S G +Y+ + R
Sbjct: 1093 AKNELDVQKKLAEARLSAGSSIGSHSQGYRMWKGSYKWEGQNWRDVAGEISRKYGVTFNE 1152
Query: 296 -GEYPHFDQEKLQTIADN-----TLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHP 349
+ + E LQ+I +N ++ D F+ HL + ++ +
Sbjct: 1153 MKDMINMSPEVLQSIRENYAGLWSVMDGEFRNHLENIIKYGETEKEILEAVKEQVTGISF 1212
Query: 350 HPKRKEVERELSEIE 364
+S++E
Sbjct: 1213 DSFEDSYWEMISDLE 1227
>gi|118114669|ref|XP_423552.2| PREDICTED: similar to ALR, partial [Gallus gallus]
Length = 1172
Score = 41.4 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 315 EDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARK 374
++P PE PL ++H + Q P +P + P E+EL + + K+ +
Sbjct: 273 DEPPVDEMPPEKPPLD--EQHLEEQPPEKPPLDEQPPIELPSEKELLDEQPPKELHPEKP 330
Query: 375 FFD-----EGSPDHSP 385
D E PD P
Sbjct: 331 LLDELPLAEQPPDEPP 346
>gi|317509188|ref|ZP_07966812.1| hypothetical protein HMPREF9336_03184 [Segniliparus rugosus ATCC
BAA-974]
gi|316252545|gb|EFV11991.1| hypothetical protein HMPREF9336_03184 [Segniliparus rugosus ATCC
BAA-974]
Length = 1053
Score = 41.4 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 38/115 (33%), Gaps = 5/115 (4%)
Query: 248 VNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTL-AHGVDSLVRGEYPHFDQEKL 306
G ++PG +TS + A +SL G P +E
Sbjct: 908 APQSAWGSATPGDPSPAAWDAAPGDYTSQREAKEKAQAYRAAAEESLRTGGAPAPQRETS 967
Query: 307 QT--IADNTLEDPHFKPHLPEPEPLPQYKEHSDRQ-KPS-EPLAEHPHPKRKEVE 357
QT E+ P E +P + RQ +P EP P P+R + E
Sbjct: 968 QTSQAYRAAAEESLRAPAPSETQPASPAQSEPARQAEPQREPQEREPQPQRPDEE 1022
>gi|303317268|ref|XP_003068636.1| serine/threonine-protein kinase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108317|gb|EER26491.1| serine/threonine-protein kinase, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 795
Score = 41.4 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 17/183 (9%)
Query: 265 VKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLP 324
++ +P A + + RG+ + LQT + +
Sbjct: 238 MEDETPSEPVDEAALIEQRRRRREAIKAKYRGQATPLLVQALQTGNETGSTACDASEAVS 297
Query: 325 EP-------EPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFD 377
+P P + S Q P++ + S +E K+E+SA
Sbjct: 298 KPDLSGRQGSPTNTLDDTSTAQSPTDLHVSRDEDLANTDLQSRSGLE--KEEASA----- 350
Query: 378 EGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLPHVDEQTMHRFSELKERH 437
D+ P R +K+ + D P + +D T T V E T +++K +
Sbjct: 351 ---ADYDPTADMRQEKMKHDKRHFGEDMPASAYDETKVTRQEVLVPEPTAADPNQMKAKD 407
Query: 438 PVE 440
P +
Sbjct: 408 PFD 410
>gi|221330583|ref|NP_001137761.1| kismet, isoform C [Drosophila melanogaster]
gi|220901895|gb|ACL82968.1| kismet, isoform C [Drosophila melanogaster]
Length = 5517
Score = 41.4 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 73/206 (35%), Gaps = 17/206 (8%)
Query: 259 LPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDS------LVRGEYPHFDQEKLQTIADN 312
L +++SS + + TD + S + G+ + + +
Sbjct: 1597 LDESSQLEASSSTSAVAEKERQISTDAANAAMSSKPNYVYINTGDEDSMVVQLVLAMRMG 1656
Query: 313 TLEDPHFKPHLPEPEPLP-QYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESS 371
E KP PEP + K D +P + E +++L++ E K ESS
Sbjct: 1657 KRELILDKPKEKAPEPKQDEEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESS 1716
Query: 372 ARKF--FDEGSPDHSPFKGERNQKLDPMR------GADFTDAPHAKFDATTFTESLPHVD 423
A + +E PD S E N+ D M +D P + + E+ ++
Sbjct: 1717 AMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIE 1776
Query: 424 EQTMHRFSELKERHPVEAREVLEGLQ 449
E + L H E VLE ++
Sbjct: 1777 EDKSS--TVLTADHAKEPETVLEKME 1800
>gi|319785587|ref|YP_004145063.1| peptidoglycan-binding domain 1 protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171475|gb|ADV15013.1| Peptidoglycan-binding domain 1 protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 1345
Score = 41.0 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 40/140 (28%), Gaps = 5/140 (3%)
Query: 36 KEVINMPARSLDKLVAPFREETHDQPNYYRGS---RTDPHSVGTGAHLVEGLTSLAPYIA 92
K PA+ V P Q + +TD + + P
Sbjct: 897 KAFFADPAQVASNDVVPIVASQPMQTASLDAASQPKTDAQPAAVESAPDHAVRQAEPSAP 956
Query: 93 GAA--LAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETA 150
+A + + P+ G A + P+ A A + + ++ +
Sbjct: 957 ATKDDMAAQSMIATPSGAEPSMGAAPIAEPVPAPVALATSADASPAASETTTASAAPAST 1016
Query: 151 DALAWREAIVHTSALLAPGA 170
+A A T+ + P A
Sbjct: 1017 VPVAAEPADTDTATGIQPTA 1036
>gi|330468592|ref|YP_004406335.1| cytochrome c oxidase subunit i [Verrucosispora maris AB-18-032]
gi|328811563|gb|AEB45735.1| cytochrome c oxidase, subunit i [Verrucosispora maris AB-18-032]
Length = 668
Score = 41.0 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 18/122 (14%)
Query: 294 VRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPS--------EPL 345
+R E P FD + + ++D + P P+ ++E R+ PS E
Sbjct: 547 IRSERPAFDAKYGELVSDLGRDLPQRTTKPPQGLRDELHREKHHRESPSAEGAHGAPEAT 606
Query: 346 AEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLD------PMRG 399
A HP P+ E+ + + ++ S F D P+ +P ER + D P G
Sbjct: 607 AYHPAPQSGARPVEVPDPQNVRRPS----FDDTDEPEDNPLGAERRSETDDDRWRHPRSG 662
Query: 400 AD 401
D
Sbjct: 663 GD 664
>gi|167838495|ref|ZP_02465354.1| hypothetical protein Bpse38_18442 [Burkholderia thailandensis
MSMB43]
Length = 283
Score = 41.0 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 56/188 (29%), Gaps = 24/188 (12%)
Query: 228 IGAFFG-GMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTL 286
IG +G GM +N L ++ P ++ + P + H +L
Sbjct: 13 IGLAYGPGMAEFAARNAHLVDYIEVPFEQLRFSPAVAELQQTIP--------FVLHCASL 64
Query: 287 AHGVDSLVRGEYPHFDQEKLQTIADNTLED--PHFKPHLPEPEPLPQYKEHSDRQKPSEP 344
+ + D + I L+ P HL P +E +P+
Sbjct: 65 SIA-------GFVPPDASTVDAIERTALQTGTPWIGEHLAYISADPIGEELGGAGEPTSL 117
Query: 345 LAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTD 404
E R + + A + E SP + P G M ADF
Sbjct: 118 SYTLCPQLSDETVRRVVDNLAALRPHFPVPLIVENSPQYFPIPGS------TMGMADFIR 171
Query: 405 APHAKFDA 412
A + DA
Sbjct: 172 AIAQRCDA 179
>gi|260785738|ref|XP_002587917.1| hypothetical protein BRAFLDRAFT_87305 [Branchiostoma floridae]
gi|229273072|gb|EEN43928.1| hypothetical protein BRAFLDRAFT_87305 [Branchiostoma floridae]
Length = 503
Score = 41.0 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 297 EYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPL-PQYKEHSDRQKPSEPLAEHPHPKRKE 355
E P F E + A+N P F+P PE +P P+++ + +P P + +P+ +
Sbjct: 77 ENPEFQPENPELQAEN----PEFQPENPELQPENPEFQPENPELQPENPELQPENPENQP 132
Query: 356 VEREL---SEIEGAKKESSARKFFDE 378
EL + + G E + +FD+
Sbjct: 133 ETPELQPGASLLGTTAEGDVQGYFDD 158
>gi|296228399|ref|XP_002759787.1| PREDICTED: xin actin-binding repeat-containing protein 1-like
[Callithrix jacchus]
Length = 1822
Score = 41.0 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 12/130 (9%)
Query: 269 SPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEP 328
+P S + L V +L + D + L+ + + + P P
Sbjct: 1437 APESPASLQRNQNELQGLLTQVQALEKEAESSVDVQALRRLFEAVPQLEGAAPQAPTTRQ 1496
Query: 329 LPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGA-----------KKESSARKFFD 377
P+ + + E +++ L +IE A + E+SAR F
Sbjct: 1497 KPEASVEQAFGELTRVSTEVAR-LKEQTLARLLDIEEAVHKALSSMSSLQPEASARGHFQ 1555
Query: 378 EGSPDHSPFK 387
DHS K
Sbjct: 1556 GPPKDHSAHK 1565
>gi|255283111|ref|ZP_05347666.1| sortase B signal domain, QVPTGV class family [Bryantella
formatexigens DSM 14469]
gi|255266413|gb|EET59618.1| sortase B signal domain, QVPTGV class family [Bryantella
formatexigens DSM 14469]
Length = 1150
Score = 40.7 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 98/310 (31%), Gaps = 41/310 (13%)
Query: 73 SVGTGAHLVEGLT----SLAPYIAGAALAGKLLSF--------IPTPLTRLAGLALQSAP 120
VG +++G++ + P G GK+ + + +L +P
Sbjct: 756 FVGIDDAVLDGVSLPISTDMPEYTGEVPEGKVFAGWTLNQGTEVYKAGEKLVLTTENGSP 815
Query: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
+ + + E+ + EG+ A + + + P + V
Sbjct: 816 AFGKYAFVFEPYFEEA-QTLKAEGIVSFVGIDGAVLDGVSLPISTDMP-EYTGEVPEGKV 873
Query: 181 ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFD-----MESLITDGLIGAFFGGM 235
+G LN + + G + ++G P ++ +F+ + L +G+ F G+
Sbjct: 874 FAGWTLNQGTEVYKAGEKLVLTTENGSPAFGKYAFVFEPYFEEAQILKAEGI--VSFVGI 931
Query: 236 HSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVR 295
+ +SL + D+ E E + TL G +
Sbjct: 932 DGAVLDGVSLPISTDMPEYTGE-----------------VPEGKVFAGWTLNQGTEVYKA 974
Query: 296 GEYPHFDQEKLQTIAD--NTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAE-HPHPK 352
GE E + +P+F+ P EP + + SEP +E P
Sbjct: 975 GERLVLTTENGSPAFGKYAFVFEPYFEDQEPTSEPTSEPTSEPTSEPTSEPTSEPTSEPT 1034
Query: 353 RKEVERELSE 362
+ SE
Sbjct: 1035 SEPTSEPTSE 1044
>gi|237841197|ref|XP_002369896.1| hypothetical protein TGME49_120290 [Toxoplasma gondii ME49]
gi|211967560|gb|EEB02756.1| hypothetical protein TGME49_120290 [Toxoplasma gondii ME49]
gi|221483590|gb|EEE21902.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 534
Score = 40.7 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 273 HTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQ---EKLQTIADNTLEDPHFKP-HLPEPEP 328
+ AHT ++ + +RG P A+N ED +P E
Sbjct: 42 PHDTFSRPAHTHSVLIATAAELRGNAPPVSPGTTRATDAAAENKAEDSSSEPGESTEVAQ 101
Query: 329 LPQYKEHSDRQKPSEPLAE-HPHPKRKEVERE 359
LP + S AE H + VE++
Sbjct: 102 LPAQEVSSGEPSAETTPAESHDTSESDPVEKD 133
>gi|38344657|emb|CAE02319.2| OSJNBb0112E13.1 [Oryza sativa Japonica Group]
gi|38346564|emb|CAE03785.2| OSJNBa0063G07.9 [Oryza sativa Japonica Group]
gi|116309495|emb|CAH66563.1| OSIGBa0113K06.9 [Oryza sativa Indica Group]
gi|218194590|gb|EEC77017.1| hypothetical protein OsI_15361 [Oryza sativa Indica Group]
Length = 303
Score = 40.7 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 283 TDTLAHGVDSLVRGE---YPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQ 339
L G +SL DQ K D +E + L E + L + ++ ++Q
Sbjct: 201 QKELEEGRESLRNIRLKLDMPPDQRKRLIRRDLRVEHQEIERQLQEMQQLERERQQLEQQ 260
Query: 340 KPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEG 379
+ L +++E++R+L ++E ++ R F G
Sbjct: 261 EIERQLPSRQQLEQQEIKRQLQDMERERQLHRWRNFVTGG 300
>gi|262198713|ref|YP_003269922.1| hypothetical protein Hoch_5546 [Haliangium ochraceum DSM 14365]
gi|262082060|gb|ACY18029.1| hypothetical protein Hoch_5546 [Haliangium ochraceum DSM 14365]
Length = 1503
Score = 40.3 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 50/322 (15%), Positives = 79/322 (24%), Gaps = 34/322 (10%)
Query: 51 APFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTR 110
P E D G V L S AP G+L P
Sbjct: 402 QPVAAEASDSEGGGAGGAGGAGGEAGAETAVPDLASAAPEAG----LGQLQGVRPDKQQT 457
Query: 111 LAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGA 170
G + + S A++ +G ETA + + + + A +
Sbjct: 458 ALGGVRAA---IGTDVGESRSELAQNPPQQMSDGDAAETAASGEQAASEASSDSAAATES 514
Query: 171 IASQSIAKTVASGAVLNVPFGMVERGWS----SKVLEDHGYPDMAQHY--RIFDMESLIT 224
A+ A + G + + G + A +I D +
Sbjct: 515 AAASPEGNAAAGAETADTIAGTEAEPEAPADEAASQTREGEAEQANDAATQILDDIASTI 574
Query: 225 DGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTD 284
L G+FFGG M+ + L + P + EA
Sbjct: 575 SSLFGSFFGGAAENAANQMAKAEADGLASSLDNLSTKSDVAADPGPA-PELAVSTEAQAT 633
Query: 285 TLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEP 344
D+ L+ D P ++ PSE
Sbjct: 634 AKQ--------------DRAALEQQVDGA------AQQTAAEVQRPMGEDSIATTVPSEQ 673
Query: 345 LAEHPHPKRKEVERELSEIEGA 366
L P E L ++ A
Sbjct: 674 LRAAPIESAAASEIALPDVATA 695
>gi|170725919|ref|YP_001759945.1| phosphoribosylformylglycinamidine synthase [Shewanella woodyi ATCC
51908]
gi|169811266|gb|ACA85850.1| phosphoribosylformylglycinamidine synthase [Shewanella woodyi ATCC
51908]
Length = 1293
Score = 40.3 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 48/328 (14%), Positives = 94/328 (28%), Gaps = 28/328 (8%)
Query: 56 ETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLA 115
E D+ RGS+ G ++ + P+ A ++++ + G A
Sbjct: 313 EIRDEGATGRGSKPKAGLTGFSVSNLKIPGFVQPWEADYGKPERIVTALDIMTEGPLGGA 372
Query: 116 LQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQS 175
+ AL Y + H V + + + + +
Sbjct: 373 AFNNEFGRPALLGYFRTYEQEVSSHNGVEV-RGYHKPIMLAGGLGNIRGEHVQKGEITVG 431
Query: 176 IAKTVASGAVLNVPFGM--VERGWSSKVLEDHGYPDMAQHYRIFD-------------ME 220
V G +N+ G S + ED + + + + +
Sbjct: 432 AKLIVLGGPAMNIGLGGGAASSMASGESSEDLDFASVQRENPEMERRCQEVIDRCWQMGD 491
Query: 221 SLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGIT-ERLPYKHGVKSSSPGLHTSFDAY 279
+ GG+ N LVND G E SP ++
Sbjct: 492 RNPIQFIHDVGAGGL-----SNAFPELVNDGDRGGKFELRNVPSDEPGMSPLEIWCNESQ 546
Query: 280 EAHTDTLA----HGVDSLVRGEYPHFDQEKLQTIADN-TLEDPHFKPHLPEPEPLPQYKE 334
E + ++A ++ E F + T + +L D HF + PL
Sbjct: 547 ERYVMSVAPENLEVFTAICERERAPFSVVGVATEERHLSLSDEHFNDKPIDL-PLEVLLG 605
Query: 335 HSDRQKPSEPLAEHPHPKRKEVERELSE 362
+ + A+ P+ + + E+ E
Sbjct: 606 KAPKMSRDVVTAKALSPELNQEKIEIKE 633
>gi|212545080|ref|XP_002152694.1| dihydrolipoamide succinyltransferase, putative [Penicillium
marneffei ATCC 18224]
gi|210065663|gb|EEA19757.1| dihydrolipoamide succinyltransferase, putative [Penicillium
marneffei ATCC 18224]
Length = 476
Score = 40.3 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 320 KPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHP-KRKEVERELSEIEGAKKESSARKFFDE 378
P+ EP P+ KE PS+P + P K + V+ + E K + RK +
Sbjct: 177 AAEKPKHEPAPEKKEEKTEASPSKPETKEAAPSKPEPVKEKQPE---RPKPTEPRKEAEP 233
Query: 379 GSPDHSPFKGERNQKLDPMR---GADFTDAPHAKFDATTFTESLPHVDEQTMHRFSEL 433
+P + + ER K++ MR + + TTF E VD ++ F +L
Sbjct: 234 STPAQAGGREERRVKMNRMRLRIAERLKQSQNTAASLTTFNE----VDMSSLMEFRKL 287
>gi|308198333|ref|XP_001386996.2| DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) [Scheffersomyces stipitis CBS 6054]
gi|149388976|gb|EAZ62973.2| DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) [Pichia stipitis CBS 6054]
Length = 1739
Score = 40.3 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 78/255 (30%), Gaps = 11/255 (4%)
Query: 19 AQRPRVSPDI--KWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGT 76
Q +PD ++ G + D + P + + N + + T
Sbjct: 1287 MQHKVNTPDATGEFKQGKEWVLETDGVNLADVMAVPGVDSSRTYSNNFIEILSVLGIEAT 1346
Query: 77 GAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLS-HKAE 135
A L + + ++ + + + +R +A+ + A + E
Sbjct: 1347 RAALFKEILNVLSFDGSYVNYRHMALLVDVMTSRGHLMAITRHGINRSDTGALMRCSFEE 1406
Query: 136 SSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVER 195
+ G E D E ++ + + A NV
Sbjct: 1407 TVEILLEAGASAELDDCRGISENVMLGQMAPLGTGAFDVMLDDKMLQTAPSNVAVAAGN- 1465
Query: 196 GWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGI 255
+ +D G A YR +DME GA F +H+ QVQ++S L + +
Sbjct: 1466 ---DEFADDGG----ATPYREYDMEDDKIQFEEGAGFSPIHTAQVQDVSGGLTSYGGQPT 1518
Query: 256 TERLPYKHGVKSSSP 270
+ S+SP
Sbjct: 1519 SPSATSPFSYGSTSP 1533
>gi|223993045|ref|XP_002286206.1| transketolase [Thalassiosira pseudonana CCMP1335]
gi|220977521|gb|EED95847.1| transketolase [Thalassiosira pseudonana CCMP1335]
Length = 719
Score = 40.3 bits (92), Expect = 0.78, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 84/279 (30%), Gaps = 43/279 (15%)
Query: 130 LSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLN-- 187
SH + +GV+ T + I + + + N
Sbjct: 123 GSHTPGHPENFCTKGVEVCT---GPLGQGISNAVGMAIAAKHLGAIYNTADFPNIISNKT 179
Query: 188 ---VPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMS 244
G ++ G S + G+ + ++D + DG G F +K+ +
Sbjct: 180 YVICGDGCLQEGISGEACSLAGHLGLGDLIVLYDDNHITIDGDTGLAFTEDVNKRYEAYG 239
Query: 245 --LRLVNDLKEGI--TERLPYKHGVKSSSP-----------GLHTSFDAYEAHTDTLAHG 289
++ V D+ G+ + + + P G + +H L
Sbjct: 240 WHVQTVGDVANGLEDLNKAIAEAKKVTDKPSLIKIRTEIGFGSPHKQGSASSHGAPLGDR 299
Query: 290 VDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHP 349
LV+ D Q+ + + ++K E + + + ++ HP
Sbjct: 300 EIELVKSRLYGCDPS--QSFFVDEDVNAYYKQQAAEGDAARAAWD----AEFAKYKVAHP 353
Query: 350 HPKRKEVEREL-------------SEIEGAKKESSARKF 375
K E+ER + + G K ++ RKF
Sbjct: 354 D-KASELERRFKHELPNDVFDDLPTFVYGKDKANATRKF 391
>gi|260804555|ref|XP_002597153.1| hypothetical protein BRAFLDRAFT_118100 [Branchiostoma floridae]
gi|229282416|gb|EEN53165.1| hypothetical protein BRAFLDRAFT_118100 [Branchiostoma floridae]
Length = 472
Score = 40.3 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 10/136 (7%)
Query: 239 QVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEY 298
V+ ++ G TE V +S P + + + ++ D LA L +
Sbjct: 29 DVKEERAPAEEEMVRGTTECS-----VVTSQPPM-SQPRSSKSSADVLAE----LRQDGL 78
Query: 299 PHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVER 358
+ L+ P +P P P+ K Q+ E + + P R ++ +
Sbjct: 79 LPLNTRGESVAFQVLLDKPASEPDAPPRRPVKLAKLEETLQERRERVKKEPAGSRTQLRQ 138
Query: 359 ELSEIEGAKKESSARK 374
+LS ++E A +
Sbjct: 139 QLSNAANRREEMLAER 154
>gi|225562962|gb|EEH11241.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 439
Score = 40.3 bits (92), Expect = 0.82, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 60/192 (31%), Gaps = 19/192 (9%)
Query: 185 VLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMS 244
+N + L+ D+ F E D +I G + +Q +
Sbjct: 39 TVNQILSKGLHNTDGECLKYT--TDLMDKLEKFKSEHADDDTVIDDAAGQAYVEQFGLET 96
Query: 245 LRLVNDLKEGITERLPYKHGVKSSS-------------PGLHTSFDAYEAHTDTLAHGVD 291
+ ++ L ++++ P T + H +A
Sbjct: 97 FQRADNAVRANKASLQTADTFQAAATFLELCQIWGPIDPETATKIKFAKYHALRIAKA-- 154
Query: 292 SLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQ-KPSEPLAEHPH 350
L GE P+ ++ +N + P P+ PE + L S + K +P E
Sbjct: 155 -LKAGEDPNLSNPSMEEEEENLRDGPTLDPNDPEVQALNGSPSQSVPEVKLRQPSVEDVP 213
Query: 351 PKRKEVERELSE 362
+ ER L++
Sbjct: 214 DEFDSEERRLAQ 225
>gi|240279783|gb|EER43288.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325092915|gb|EGC46225.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 439
Score = 39.9 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 60/192 (31%), Gaps = 19/192 (9%)
Query: 185 VLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMS 244
+N + L+ D+ F E D +I G + +Q +
Sbjct: 39 TVNQILSKGLHNTDGECLKYT--TDLMDKLEKFKSEHADDDTVIDDAAGQAYVEQFGLET 96
Query: 245 LRLVNDLKEGITERLPYKHGVKSSS-------------PGLHTSFDAYEAHTDTLAHGVD 291
+ ++ L ++++ P T + H +A
Sbjct: 97 FQRADNAVRANKASLQTADTFQAAATFLELCQIWGPIDPETATKIKFAKYHALRIAKA-- 154
Query: 292 SLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQ-KPSEPLAEHPH 350
L GE P+ ++ +N + P P+ PE + L S + K +P E
Sbjct: 155 -LKAGEDPNLSNPSMEEEEENLRDGPTLDPNDPEVQALNGSPSQSVPEVKLRQPSVEDVP 213
Query: 351 PKRKEVERELSE 362
+ ER L++
Sbjct: 214 DEFDSEERRLAQ 225
>gi|123469906|ref|XP_001318162.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
gi|121900914|gb|EAY05939.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3]
Length = 5296
Score = 39.9 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 239 QVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEY 298
+NM L +K+ + + ++ + L + + L +D L R +
Sbjct: 4190 DSKNMLLDSFGTIKDHLNDANNNNKKLQDENNKLRDDAQKATSKNNELQSIIDDLNR-KL 4248
Query: 299 PHFDQEKLQTIADNTLEDPHFKPHLPEPEPL--PQYKEHSDRQKPSEPLAEHPHPKRKEV 356
+ D EK T + K E + + + +++ E LA+ ++K+V
Sbjct: 4249 ANLDAEKKATEEKLKNTEDKLKQAEAEKKATEDKLRETENAKKETEEKLAKTEE-EKKQV 4307
Query: 357 ERELSEIEGAKKESSAR 373
E +L+ E AKKE+ +
Sbjct: 4308 EDKLAATEAAKKETEDK 4324
>gi|126307916|ref|XP_001364954.1| PREDICTED: similar to amine oxidase, copper containing 3
[Monodelphis domestica]
Length = 499
Score = 39.9 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Query: 264 GVKSSSPGLHTSF--DAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKP 321
G+ +S + + + E H A + L RG P +E L + P+
Sbjct: 80 GLVDASRAIPSDNCVYSVELHLPPKAVALAHLDRGGPPP-PREALALVFFGQQARPNVSE 138
Query: 322 HLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEI 363
L P P P Y ++ PL H P + E++++
Sbjct: 139 LLVGPLPNPSYLRDVTVERHGGPLPYHRRPLSTKEMEEMNKM 180
>gi|154280286|ref|XP_001540956.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412899|gb|EDN08286.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 279
Score = 39.9 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 19/192 (9%)
Query: 185 VLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMS 244
+N + L+ D+ F E D +I G + +Q +
Sbjct: 39 TVNQILSKGLHNTDGECLKYT--TDLMDKLEKFKSEHADDDTVIDDAAGQAYVEQFGLET 96
Query: 245 LRLVNDLKEGITERLPYKHGVKSSS-------------PGLHTSFDAYEAHTDTLAHGVD 291
+ ++ L ++++ P + H +A
Sbjct: 97 FQRADNAVRANKASLQTADTFQAAATFLELCQIWGSIDPETAAKIKFAKYHALRIAKA-- 154
Query: 292 SLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQ-KPSEPLAEHPH 350
L GE P+ ++ +N + P P+ PE + L S + K +P E
Sbjct: 155 -LKAGEDPNLSNPSMEEEEENLRDGPTLDPNDPEVQALNGSPSQSVPEVKLRQPSVEDVP 213
Query: 351 PKRKEVERELSE 362
+ ER L++
Sbjct: 214 DEFDNEERRLAQ 225
>gi|262195344|ref|YP_003266553.1| hypothetical protein Hoch_2115 [Haliangium ochraceum DSM 14365]
gi|262078691|gb|ACY14660.1| hypothetical protein Hoch_2115 [Haliangium ochraceum DSM 14365]
Length = 1637
Score = 39.9 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 50/322 (15%), Positives = 79/322 (24%), Gaps = 34/322 (10%)
Query: 51 APFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTR 110
P E D G V L S AP G+L P
Sbjct: 402 QPVAAEASDSEGGGAGGAGGAGGEAGAETAVPDLASAAPEAG----LGQLQGVRPDKQQT 457
Query: 111 LAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGA 170
G + + S A++ +G ETA + + + + A +
Sbjct: 458 ALGGVRAA---IGTDVGESRSELAQNPPQQMSDGDAAETAASGEQAASEASSDSAAATES 514
Query: 171 IASQSIAKTVASGAVLNVPFGMVERGWS----SKVLEDHGYPDMAQHY--RIFDMESLIT 224
A+ A + G + + G + A +I D +
Sbjct: 515 AAASPEGNAAAGAETADTIAGTEAEPEAPADEAASQTREGEAEQANDAATQILDDIASTI 574
Query: 225 DGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTD 284
L G+FFGG M+ + L + P + EA
Sbjct: 575 SSLFGSFFGGAAENAANQMAKAEADGLASSLDNLSTKSDVAADPGPA-PELAVSTEAQAT 633
Query: 285 TLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEP 344
D+ L+ D P ++ PSE
Sbjct: 634 AKQ--------------DRAALEQQVDGA------AQQTAAEVQRPMGEDSIATTVPSEQ 673
Query: 345 LAEHPHPKRKEVERELSEIEGA 366
L P E L ++ A
Sbjct: 674 LRAAPIESAAASEIALPDVATA 695
>gi|311110217|ref|ZP_07711614.1| putative membrane protein YdgH [Lactobacillus gasseri MV-22]
gi|311065371|gb|EFQ45711.1| putative membrane protein YdgH [Lactobacillus gasseri MV-22]
Length = 1155
Score = 39.9 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 47/327 (14%), Positives = 98/327 (29%), Gaps = 24/327 (7%)
Query: 2 YFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQP 61
Y A+ + D K+ K + ++ + S K VA + +
Sbjct: 621 YAQAMDSAKLNDQQKQAMSVALNQILGKVESASSQK--SQALTSSLKSVAGNIQAAGEAD 678
Query: 62 NYYRGSRTDPHSVGTG-AHLVEGLTSLAPYIAGAALAG-KLLSFIPTPLTRLA-GLALQS 118
S + + ++ + +L + A A K L T L +L+ GL
Sbjct: 679 KKLGQSASSVGATLQNLQGMMSQVATLKQEVNTLANASNKALPGATTALNQLSSGLTQVQ 738
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAK 178
+ +A GA A + + +++ + ++ + + + LA GA + +
Sbjct: 739 SAVAQGAAGASRLNDGAARLNNGAGQLATGLQAGVSGSSQLANGAGQLANGAGQLNTGLQ 798
Query: 179 TVASGA-----VLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFG 233
SG ++ G + S + G +A + G G
Sbjct: 799 AGLSGTNQLANGIDQLNGGAGQLASGAGQLNGGSGQLAN------GIGQLNGGASQLANG 852
Query: 234 GMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSL 293
++ + G+ E Y G+ S+ G A H+ T +D+
Sbjct: 853 AGQIASNNPKITAGIDKVNSGLGEGQEYLTGLADSAAGKTFYIPAKMIHSSTFKPALDNY 912
Query: 294 VRGEY--------PHFDQEKLQTIADN 312
+ + D +
Sbjct: 913 MSSDLKSTKIIIILKLDPASTEGAKKA 939
>gi|116630191|ref|YP_815363.1| hypothetical protein LGAS_1630 [Lactobacillus gasseri ATCC 33323]
gi|282852809|ref|ZP_06262150.1| MMPL family protein [Lactobacillus gasseri 224-1]
gi|116095773|gb|ABJ60925.1| Predicted membrane protein [Lactobacillus gasseri ATCC 33323]
gi|282555917|gb|EFB61538.1| MMPL family protein [Lactobacillus gasseri 224-1]
Length = 1246
Score = 39.9 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 47/327 (14%), Positives = 98/327 (29%), Gaps = 24/327 (7%)
Query: 2 YFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQP 61
Y A+ + D K+ K + ++ + S K VA + +
Sbjct: 712 YAQAMDSAKLNDQQKQAMSVALNQILGKVESASSQK--SQALTSSLKSVAGNIQAAGEAD 769
Query: 62 NYYRGSRTDPHSVGTG-AHLVEGLTSLAPYIAGAALAG-KLLSFIPTPLTRLA-GLALQS 118
S + + ++ + +L + A A K L T L +L+ GL
Sbjct: 770 KKLGQSASSVGATLQNLQGMMSQVATLKQEVNTLANASNKALPGATTALNQLSSGLTQVQ 829
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAK 178
+ +A GA A + + +++ + ++ + + + LA GA + +
Sbjct: 830 SAVAQGAAGASRLNDGAARLNNGAGQLATGLQAGVSGSSQLANGAGQLANGAGQLNTGLQ 889
Query: 179 TVASGA-----VLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFG 233
SG ++ G + S + G +A + G G
Sbjct: 890 AGLSGTNQLANGIDQLNGGAGQLASGAGQLNGGSGQLAN------GIGQLNGGASQLANG 943
Query: 234 GMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSL 293
++ + G+ E Y G+ S+ G A H+ T +D+
Sbjct: 944 AGQIASNNPKITAGIDKVNSGLGEGQEYLTGLADSAAGKTFYIPAKMIHSSTFKPALDNY 1003
Query: 294 VRGEY--------PHFDQEKLQTIADN 312
+ + D +
Sbjct: 1004 MSSDLKSTKIIIILKLDPASTEGAKKA 1030
>gi|9453839|dbj|BAB03273.1| myosin [Chara corallina]
Length = 2182
Score = 39.9 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 9/149 (6%)
Query: 235 MHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLV 294
+ V + + + P GV + PG + H + + SL
Sbjct: 1638 IGRAAVTRIKPTPEPVITTSYPDEQPATPGV--TGPGTPSRPLGRSQHIRSESSDFTSLY 1695
Query: 295 RGEYPHF------DQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEH 348
E D EK + + D P P +PE +P+ Q K K +
Sbjct: 1696 FREDSPVPEAKPVDHEKSKMMPDKLQYLPEDSP-VPEAKPVDQKKSKMMPDKLQYLPEDS 1754
Query: 349 PHPKRKEVERELSEIEGAKKESSARKFFD 377
P P+ K V+++ S++ K +S D
Sbjct: 1755 PVPEAKPVDQKKSKMMPDKLQSDQEALLD 1783
>gi|170731993|ref|YP_001763940.1| outer membrane autotransporter [Burkholderia cenocepacia MC0-3]
gi|169815235|gb|ACA89818.1| outer membrane autotransporter barrel domain protein [Burkholderia
cenocepacia MC0-3]
Length = 1763
Score = 39.5 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 73/283 (25%), Gaps = 17/283 (6%)
Query: 32 TGLGKEVINMPARSLDKLVA--PFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAP 89
G +++ A L A P + + + +E +++
Sbjct: 842 AGATAGIVDGQAHDLAGAAAGAPVATTLTNHAAVTSSTAGVTGFIAQNLGTLENRSTVL- 900
Query: 90 YIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKET 149
+ GA G + + T GAL S ++ + +
Sbjct: 901 -LTGAGSTGVVAGTLGTVNNAST----IRVSDGTGALVQGASATLANAGSIEADDGIAGV 955
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
A + + + A + + SG + + G S + + G
Sbjct: 956 RLTGAGASVALSGAGTVVANGSADGVLIDSTVSGGGIAAGPTSIAVGGSGSGIRNLG--- 1012
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKS-- 267
A + T G G + ++ ++ T+ L
Sbjct: 1013 -ANATIALSGTQVATTG--NGAAGLASTGAGARIATDAATVVRTAGTDALGLSVSGADST 1069
Query: 268 -SSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTI 309
++ G + AH + G +L+ G I
Sbjct: 1070 LTANGTTVATTGANAHAIVMDGGATALLSGAKISASGAAADGI 1112
>gi|302657623|ref|XP_003020530.1| GRAM domain protein [Trichophyton verrucosum HKI 0517]
gi|291184371|gb|EFE39912.1| GRAM domain protein [Trichophyton verrucosum HKI 0517]
Length = 1254
Score = 39.5 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 80/262 (30%), Gaps = 18/262 (6%)
Query: 25 SPDIKWHTGLGKEVINMPARSLDKLVAPFREETH-----DQPNYYRGSRTDPHSVGTGAH 79
S ++ G +++ + L + + + N G D
Sbjct: 394 SSTSQFGAGFFSSMVSAAQNAATTLSSSLNPQAKGSKTSQEQNNTEGDTRDSGEQEKSGA 453
Query: 80 LVEGLTSLAP-------YIAGAALAGKLLSFIPTP-LTRLAGLALQSAPLAAGALYAYLS 131
G ++AP + S + L + AG S AG A +
Sbjct: 454 TPGGEENVAPQNGKKELAVNTLGTGDLDFSHLGLEHLEKAAGDGEGSKLDVAGRPRAKTA 513
Query: 132 HKAESSIHHQIEGVDKETADALAWREAIVH---TSALLAPGAIASQSIAKTVASGAVLNV 188
+ ++E V A ++A+ V T + + + V A N
Sbjct: 514 VSQRDELAARMEDVRAARAVSMAYGNTPVTPIVTVDSINTDNQPANPLNTVVRDNAGENT 573
Query: 189 PFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLV 248
P G +++ L+ +G + R + T+ IGA G + +N S+ +
Sbjct: 574 PPGGSVHSETAESLKQNGSLKSRRARRDRGSSAATTNTTIGAPIGT--NLTARNTSVPRL 631
Query: 249 NDLKEGITERLPYKHGVKSSSP 270
+R H + S P
Sbjct: 632 TGFAVASKKRNRDFHSLFRSVP 653
>gi|330930785|ref|XP_003303149.1| hypothetical protein PTT_15249 [Pyrenophora teres f. teres 0-1]
gi|311321027|gb|EFQ88755.1| hypothetical protein PTT_15249 [Pyrenophora teres f. teres 0-1]
Length = 1543
Score = 39.5 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 36/303 (11%)
Query: 103 FIPTPLTRLAGLALQSAPLAAGALYAYLSHKAES----------SIHHQIEGVDKETADA 152
+ L ++ + P AL+A L ++S S ++ +G+ +
Sbjct: 195 LFGASGSSLLNTSIATNPYGNDALFAGLQTPSQSPGPIATPLSNSQKNKSKGILPQHKLN 254
Query: 153 LAWREAIVHTSALLAPGAI---ASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
+ ++ + L + S+A + L G + R V + +
Sbjct: 255 PSASTRLITPQSKLGGYGFSYSGASSLAGSTGFNGSL-FANGHLSRSLGKSVSTSNLRNN 313
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMHSKQV---QNMSLRLVNDLKEGITERLPYKHGVK 266
I + T G FG K++ +N++ E
Sbjct: 314 FTPDTSILSPGAFTT---TGRNFGNGSLKRLNINRNINGGRTPLFDE-------PSQKRV 363
Query: 267 SSSPGLHTSFDAYEAHT--------DTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPH 318
S +PG + + D D+ + GE P +++ ++DP
Sbjct: 364 SFAPGEDVNGETNGETALVVRRDEDDASPRAADNQINGESPRPAMQQVNGTEIVRVDDPA 423
Query: 319 FKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDE 378
P + ++ + S P E K+ + + + + K F+
Sbjct: 424 LAPKSASSVNIQPGQDPKPGEYWSSPSFEQLKRMSKQELKSVPDFVVGRHNIGQIK-FNH 482
Query: 379 GSP 381
G P
Sbjct: 483 GKP 485
>gi|145246284|ref|XP_001395391.1| hypothetical protein ANI_1_1632104 [Aspergillus niger CBS 513.88]
gi|134080106|emb|CAK46087.1| unnamed protein product [Aspergillus niger]
Length = 476
Score = 39.5 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 319 FKPHLPEPEPLPQYKEHSDRQKPSEP-LAEHPHPKRKEVERELSEIEGAKKESSARKFFD 377
F P P+ + + ++PS+P + P P+ +L++ E A + AR+
Sbjct: 326 FTPEPASPKTQLKSELEPKPKEPSKPATSPKPVPETTAHPEKLTQPEKATQPEKARQ--- 382
Query: 378 EGSPDHSPF-KGERNQKLDPMRGA 400
P+ PF K E + K +P GA
Sbjct: 383 ---PEKVPFDKPEPSPKFNPRSGA 403
>gi|326430011|gb|EGD75581.1| SMC2 protein [Salpingoeca sp. ATCC 50818]
Length = 1212
Score = 39.5 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 25/196 (12%)
Query: 252 KEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIAD 311
K + + + ++ + + + A E+ L D + E + +D
Sbjct: 332 KAHLAQIEETQKSLEDKAGEIDAARAAVESGQTALQAAQDGVAESEKRCM-AASVGASSD 390
Query: 312 NTLEDPHFKPHLPEPE--------PLPQYK---EHSDRQ-KPSEPLAEHPHPKRKEVERE 359
T F + E + + Q + H+ + K +P A+ + K ++R+
Sbjct: 391 GT--SLTFAEQIKELQSVISTASTQMKQAEMTISHATSELKTKKPNAKKSESEYKRLQRD 448
Query: 360 LSEIE---GAKKESSARKFFDEGSPDHSPFKGERNQKLDP--MRGADFTDAPHAKFDATT 414
++ +E A +E A+ FDEG E+ Q LD + D D A+ T
Sbjct: 449 VNALETDLKAIEEHVAKLAFDEGEEAK---LHEQKQALDREYLAAKDQVDTLSARLSRLT 505
Query: 415 F--TESLPHVDEQTMH 428
F + P D +H
Sbjct: 506 FEYKDPEPGFDRSQVH 521
>gi|283781747|ref|YP_003372502.1| protein-export membrane protein SecD [Pirellula staleyi DSM 6068]
gi|283440200|gb|ADB18642.1| protein-export membrane protein SecD [Pirellula staleyi DSM 6068]
Length = 1192
Score = 39.5 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 41/132 (31%), Gaps = 18/132 (13%)
Query: 264 GVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHL 323
VK ++P E GE P + E P P
Sbjct: 709 EVKEATPP-PVDTRTPETTPPATEKP------GEVPAEVPAEKPAETPAA-EKPAEAPKA 760
Query: 324 PEP-EPLPQYKEHSDRQKP--------SEPLAEHPHPKRKEVERELSEIEGAKKESSA-R 373
EP P+ ++ + P +P E P + K E EG+ +E +A
Sbjct: 761 EEPPAEAPKAEDKPAEEAPKTEEKPADEKPAEEKPAEEAKPAESTEPAAEGSCQEPAADD 820
Query: 374 KFFDEGSPDHSP 385
K DE P+ P
Sbjct: 821 KPADEAKPEEKP 832
>gi|238852927|ref|ZP_04643328.1| membrane protein [Lactobacillus gasseri 202-4]
gi|238834463|gb|EEQ26699.1| membrane protein [Lactobacillus gasseri 202-4]
Length = 1045
Score = 39.5 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 47/327 (14%), Positives = 98/327 (29%), Gaps = 24/327 (7%)
Query: 2 YFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQP 61
Y A+ + D K+ K + ++ + S K VA + +
Sbjct: 511 YAQAMDSAKLNDQQKQAMSVALNQILGKVESASSQK--SQALTSSLKSVAGNIQAAGEAD 568
Query: 62 NYYRGSRTDPHSVGTG-AHLVEGLTSLAPYIAGAALAG-KLLSFIPTPLTRLA-GLALQS 118
S + + ++ + +L + A A K L T L +L+ GL
Sbjct: 569 KKLGQSASSVGATLQNLQGMMSQVATLKQEVNTLANASNKALPGATTALNQLSSGLTQVQ 628
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAK 178
+ +A GA A + + +++ + ++ + + + LA GA + +
Sbjct: 629 SAVAQGAAGASRLNDGAARLNNGAGQLATGLQAGVSGSSQLANGAGQLANGAGQLNTGLQ 688
Query: 179 TVASGA-----VLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFG 233
SG ++ G + S + G +A + G G
Sbjct: 689 AGLSGTNQLANGIDQLNGGAGQLASGAGQLNGGSGQLAN------GIGQLNGGASQLANG 742
Query: 234 GMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSL 293
++ + G+ E Y G+ S+ G A H+ T +D+
Sbjct: 743 AGQIASNNPKITAGIDKVNSGLGEGQEYLTGLADSAAGKTFYIPAKMIHSSTFKPALDNY 802
Query: 294 VRGEY--------PHFDQEKLQTIADN 312
+ + D +
Sbjct: 803 MSSDLKSTKIIIILKLDPASTEGAKKA 829
>gi|297727273|ref|NP_001176000.1| Os09g0572550 [Oryza sativa Japonica Group]
gi|255679157|dbj|BAH94728.1| Os09g0572550 [Oryza sativa Japonica Group]
Length = 354
Score = 39.5 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 85/297 (28%), Gaps = 22/297 (7%)
Query: 75 GTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKA 134
G G LVE L + G G+ L + G L L A + +
Sbjct: 56 GDGEGLVEALGGVGAAEQGVGHVGEELLVL-----EARGGPLDEVLLIVRAGHVDGAAAG 110
Query: 135 ESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVE 194
+ E VD LA + A+ A A + A V E
Sbjct: 111 DDLEEDDAEAVDVGAGGELAGESVLGGAVAVGAHDAGGDVGLVADGADLGEAEVG----E 166
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM--HSKQVQNMSLRLVNDLK 252
G V ED G ++A + D + ++ A G + S +K
Sbjct: 167 AGLEGGVEEDVGGLEVA----VDDGGTSCVVQVLKAAGGALRDAHPSGPVQSRGARGQVK 222
Query: 253 EGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTL--AHGVDSLVRGEYP-HFDQEKLQTI 309
+ + + H + + + H + + E P +Q +
Sbjct: 223 QVVLQGA-AGHVLVHQDAVVAVGAVPQQRHQVWVLRQQAQHQHLHKELPVPLHPVPVQLL 281
Query: 310 ADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPS---EPLAEHPHPKRKEVERELSEI 363
P P P P + R +P+ LA P+R +L ++
Sbjct: 282 HRRLRHRPLDAQPPPVHRPEPSLPQQRLRPEPARRLRQLAVRERPRRHLPLADLQDL 338
>gi|224126103|ref|XP_002319756.1| predicted protein [Populus trichocarpa]
gi|222858132|gb|EEE95679.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 39.1 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 14/121 (11%)
Query: 286 LAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPL 345
+ + + EYP+ DQ L ++ P L P PQ ++ +Q PS
Sbjct: 1 MELAIMEVQNQEYPNTDQVVL------FIDQPD--SKLKMSSPPPQQEDSKLKQSPSPQQ 52
Query: 346 AEHPHPKRKEVE-RELSEIEGAKKESSARKFFDEGSPDHSPF--KGERNQKLDPMRGADF 402
+ PK + + L + +K +S +F + P HS + E Q L+P A
Sbjct: 53 PDIKDPKLTQARTKTLRRLNFSKPKS---RFTETNYPPHSKTFPESEEYQPLNPPESATS 109
Query: 403 T 403
T
Sbjct: 110 T 110
>gi|255732828|ref|XP_002551337.1| histone deacetylase RPD3 [Candida tropicalis MYA-3404]
gi|240131078|gb|EER30639.1| histone deacetylase RPD3 [Candida tropicalis MYA-3404]
Length = 615
Score = 39.1 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 314 LEDPH-FKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSA 372
++ P KP +PE + + KP E +E P+ + E E +E +ES
Sbjct: 455 IDKPEEAKPEESKPEEAKPEEAKPEEAKPEEAKSEEAKPEESKHE-ETKPVEAKHEESKP 513
Query: 373 RKFF-DEGSPDHSPFKGERNQKLDPMRGADFTD-APHAKFDATTFTES 418
+ +E P+ P E + ++ ++ AD + + K + T ES
Sbjct: 514 EESKPEESKPEEQPAPVEEPKSIEEVKTADESKPSEETKPETITLEES 561
>gi|242814581|ref|XP_002486396.1| dihydrolipoamide succinyltransferase, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714735|gb|EED14158.1| dihydrolipoamide succinyltransferase, putative [Talaromyces
stipitatus ATCC 10500]
Length = 459
Score = 39.1 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 64/199 (32%), Gaps = 18/199 (9%)
Query: 248 VNDLKEGITERLPYKH--------GVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYP 299
V ++ E ITE + + T + + LV E
Sbjct: 77 VPEMAESITEGTLKQFSKQVGDFVERDEEIATIETDKIDVAVNAPESGTIKELLVNEEDT 136
Query: 300 HFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRK--EVE 357
+ + + + + + EP PQ E PS+P + P K V+
Sbjct: 137 VTVGQPIVKLEPGSGDGAAAAEKPKD-EPAPQKTEEKTETAPSKPETKEPAAPSKPEPVQ 195
Query: 358 RELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMR---GADFTDAPHAKFDATT 414
+ SE K S + + P + ER K++ MR + + TT
Sbjct: 196 EKKSEQPKPKPAESKKTEPEPSKPAQPGSREERRVKMNRMRLRIAERLKQSQNTAASLTT 255
Query: 415 FTESLPHVDEQTMHRFSEL 433
F E VD ++ F +L
Sbjct: 256 FNE----VDMSSLMEFRKL 270
>gi|126665680|ref|ZP_01736661.1| Methyl-accepting chemotaxis protein (contains HAMP domain)
[Marinobacter sp. ELB17]
gi|126629614|gb|EBA00231.1| Methyl-accepting chemotaxis protein (contains HAMP domain)
[Marinobacter sp. ELB17]
Length = 564
Score = 39.1 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 59/211 (27%), Gaps = 15/211 (7%)
Query: 168 PGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGL 227
P VAS V +G + + KV GY +M + I DG
Sbjct: 133 PNGTYLIRELVKVASDGGGYVSYGW-QNEATGKVAPKLGYAEMLPQWNIMIGTGFWVDG- 190
Query: 228 IGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLA 287
+G M SK + ++ + + + + + + +A
Sbjct: 191 LGEQVAAMDSKVGDALDNAVIGSVTTSLIALAIIGLFALVVVRSIIRPLKSAASAMNDIA 250
Query: 288 HGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPH--------LPEPEPLPQYKEHSDRQ 339
G L R D + ++ + F L L + +
Sbjct: 251 SGDGDLTR----RLDIDGKDELSQLAIAFNSFADQVHGLVEQVLSSTGTLNEASAELSQV 306
Query: 340 KPSEPLA-EHPHPKRKEVERELSEIEGAKKE 369
E + +V ++++ A +E
Sbjct: 307 MEESTQGVERQKSESDQVATAMNQMTAAAQE 337
>gi|242814586|ref|XP_002486397.1| dihydrolipoamide succinyltransferase, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714736|gb|EED14159.1| dihydrolipoamide succinyltransferase, putative [Talaromyces
stipitatus ATCC 10500]
Length = 427
Score = 38.7 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 64/199 (32%), Gaps = 18/199 (9%)
Query: 248 VNDLKEGITERLPYKH--------GVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYP 299
V ++ E ITE + + T + + LV E
Sbjct: 77 VPEMAESITEGTLKQFSKQVGDFVERDEEIATIETDKIDVAVNAPESGTIKELLVNEEDT 136
Query: 300 HFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRK--EVE 357
+ + + + + + EP PQ E PS+P + P K V+
Sbjct: 137 VTVGQPIVKLEPGSGDGAAAAEKPKD-EPAPQKTEEKTETAPSKPETKEPAAPSKPEPVQ 195
Query: 358 RELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMR---GADFTDAPHAKFDATT 414
+ SE K S + + P + ER K++ MR + + TT
Sbjct: 196 EKKSEQPKPKPAESKKTEPEPSKPAQPGSREERRVKMNRMRLRIAERLKQSQNTAASLTT 255
Query: 415 FTESLPHVDEQTMHRFSEL 433
F E VD ++ F +L
Sbjct: 256 FNE----VDMSSLMEFRKL 270
>gi|333026288|ref|ZP_08454352.1| putative oxidoreductase [Streptomyces sp. Tu6071]
gi|332746140|gb|EGJ76581.1| putative oxidoreductase [Streptomyces sp. Tu6071]
Length = 474
Score = 38.7 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 59/195 (30%), Gaps = 16/195 (8%)
Query: 136 SSIHHQIEGVDKET---ADALAWREAIVHTSALLAP--GAIASQSIAKTVASGAVLNVPF 190
+ GV ET A R I +L P + + +A+G +
Sbjct: 289 AEDRVAGYGVSVETCAEALTAIARPGIASVQIILNPFRMKPLDEVLPAALAAGVGIIARV 348
Query: 191 GMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVND 250
+ S K ED + A +R F+ D G F G+ +
Sbjct: 349 PLASGLLSGKYTEDTTFA--ANDHRTFNRHGEAFDQ--GETFAGVDFATGVAAAREFAAL 404
Query: 251 LKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIA 310
EG T + PG+ T A+ GE P D++KL I
Sbjct: 405 APEGATPAQTALRWIVQQ-PGVTTVIPGARTPAQARANSA----AGELPPLDEQKLTAIR 459
Query: 311 DNTLEDPHFKPHLPE 325
+ L P + +
Sbjct: 460 E--LYTREIAPQVAD 472
>gi|257812101|gb|ACV69918.1| PHIST domain containing protein [Plasmodium berghei]
Length = 1084
Score = 38.7 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 21/182 (11%)
Query: 235 MHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLV 294
MH Q + V ++ + + + P E ++ L
Sbjct: 265 MHFTQWVDYMKYAVQEVDQ--DHEQGTSKQLPDTEPLKPEQKYYIEPSKPEQEENIEPLK 322
Query: 295 RGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEP---------LPQYKEHSDRQKPS--- 342
+ + D K + + P K ++ +P P+ +E+ D KP
Sbjct: 323 PEQEENVDPLKPEQEENIKPLKPEQKENIKPLKPEQEENIKPLKPEQEENVDPLKPEQEE 382
Query: 343 -----EPLAEHP-HPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDP 396
+P E P + E E + ++ ++E + + E + P K E+ + +DP
Sbjct: 383 NVDPLKPEQEENVDPLKPEQEENVDPLK-PEQEENIKPLKPEQKENIKPLKPEQEENVDP 441
Query: 397 MR 398
++
Sbjct: 442 LK 443
>gi|56964861|ref|YP_176592.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
gi|56911104|dbj|BAD65631.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
Length = 1398
Score = 38.7 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 55/171 (32%), Gaps = 13/171 (7%)
Query: 256 TERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLE 315
ER +H + S T + EA+ T+ E E T D E
Sbjct: 1061 KERDTDEHAEEPSIDENDTVPHSDEANDQTVEEDDHVADENEQA---SETTDTENDAENE 1117
Query: 316 DPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKF 375
+ + P + S ++P EP P E E E ++ ++E
Sbjct: 1118 ESNLPASEEAPSEENDSTDESSLEEPQEP---ETDPSTDEQEPE-TDASADEQEPETDAN 1173
Query: 376 FDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLPHVDEQT 426
DE P+ E+ + D D K DA+T E P D T
Sbjct: 1174 TDEQEPETDASTDEQEPETDAS-----ADEQEPKTDAST-DEQEPETDAST 1218
>gi|311245483|ref|XP_001925661.2| PREDICTED: ninein isoform 1 [Sus scrofa]
Length = 2136
Score = 38.7 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 23/189 (12%)
Query: 243 MSLRLVNDLKEGITERLPYKH------GVKSSSPGLHTSFDAYEAHTDTLA-HGVDSLVR 295
LR+ KE + + + H G K+ +P + T + L+ +D L+
Sbjct: 1790 SDLRMTQQEKEALKQEVMSLHKQLQNAGDKNWAPEVATHPSGFPNQQQRLSWDKLDQLMN 1849
Query: 296 GEYPHF--DQEKLQTIADNT----LEDPHFKPHLPEPEPLPQYKEHSDRQKPSEP----- 344
E + E+LQT+ NT + L LP++++H +P
Sbjct: 1850 EEQQLLWQENERLQTVVQNTKAELIHSREKVRQLESNLLLPKHQKHLSSSGTMKPPEQEK 1909
Query: 345 -----LAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRG 399
E +R R++S++ ++E +EG E+ ++ +R
Sbjct: 1910 LSLKRECEQVQKERSPTNRKVSQMNSLERELETIHLENEGLKKKQVKLDEQLMEMQHLRS 1969
Query: 400 ADFTDAPHA 408
F+ +P+A
Sbjct: 1970 TMFSPSPNA 1978
>gi|311245485|ref|XP_003121856.1| PREDICTED: ninein isoform 2 [Sus scrofa]
Length = 2049
Score = 38.3 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 23/189 (12%)
Query: 243 MSLRLVNDLKEGITERLPYKH------GVKSSSPGLHTSFDAYEAHTDTLA-HGVDSLVR 295
LR+ KE + + + H G K+ +P + T + L+ +D L+
Sbjct: 1790 SDLRMTQQEKEALKQEVMSLHKQLQNAGDKNWAPEVATHPSGFPNQQQRLSWDKLDQLMN 1849
Query: 296 GEYPHF--DQEKLQTIADNT----LEDPHFKPHLPEPEPLPQYKEHSDRQKPSEP----- 344
E + E+LQT+ NT + L LP++++H +P
Sbjct: 1850 EEQQLLWQENERLQTVVQNTKAELIHSREKVRQLESNLLLPKHQKHLSSSGTMKPPEQEK 1909
Query: 345 -----LAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRG 399
E +R R++S++ ++E +EG E+ ++ +R
Sbjct: 1910 LSLKRECEQVQKERSPTNRKVSQMNSLERELETIHLENEGLKKKQVKLDEQLMEMQHLRS 1969
Query: 400 ADFTDAPHA 408
F+ +P+A
Sbjct: 1970 TMFSPSPNA 1978
>gi|256827615|ref|YP_003151574.1| ATP synthase F1 subcomplex alpha subunit [Cryptobacterium curtum
DSM 15641]
gi|256583758|gb|ACU94892.1| ATP synthase F1 subcomplex alpha subunit [Cryptobacterium curtum
DSM 15641]
Length = 524
Score = 38.3 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 19/196 (9%)
Query: 45 SLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFI 104
+ + Q + S + VGT + +G+ + A+AG+LL F
Sbjct: 3 VTEITAQSIDDALRKQLDALDTS-VEAREVGTVIQVGDGIARI--DGLKDAMAGELLEFT 59
Query: 105 PTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSA 164
+ + G+A GA+ + + + G E A +V+
Sbjct: 60 GSAGQIVYGMAQNLEEEEVGAVLLGDVTAIKENDQVKTTGRIVEIPVGPAMCGRVVNALG 119
Query: 165 LLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLED------------HGYPDMAQ 212
+ G ++ A G++ R S+ ++ G ++
Sbjct: 120 MPIDGKGPIKTTATRPVEFKAP----GVISRQPVSEPMQTGILAVDSMIPIGRGQRELII 175
Query: 213 HYRIFDMESLITDGLI 228
R ++ D +I
Sbjct: 176 GDRQTGKTAIAIDAII 191
>gi|38174850|emb|CAD89773.1| MelB protein [Melittangium lichenicola]
Length = 1050
Score = 38.3 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 67/404 (16%), Positives = 130/404 (32%), Gaps = 59/404 (14%)
Query: 15 IKEWAQRPRVSPDIKW---HTGLGKEV------------INMPARSLDKLVAPFREETHD 59
+ ++AQ +PD + ++G G + + PA +D + TH
Sbjct: 139 LSDYAQLELNAPDPRGINPYSGSGGVLSMAAGRIAATLGLEGPALVVDTSCSSSLVATHL 198
Query: 60 QPNYYRGSRTDPHSVGTGAHLV---------EGLTSLAPYIAGAALAGKLLSFIPTPLTR 110
R D VG GA+L+ L +L+P A A G ++ +
Sbjct: 199 ACQSLRAGECDLALVG-GANLLLSPRMTVYFSKLKALSPDGACKAFDGAANGYVRSEGAG 257
Query: 111 LAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGA 170
+ L S +AAG + + + + ++ TA A +E
Sbjct: 258 VVVLKRLSDAIAAGDSIFAVVRGSAVNQDGR---TNRLTAPHQAAQE------------- 301
Query: 171 IASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGL-IG 229
+ I + + G + G VE + +L D ++ + + + + IG
Sbjct: 302 ---RVIERALGQGGIAPHEVGYVEAHGAGSLLADS--VEVKALAAVLGRQRAASAPVGIG 356
Query: 230 AFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHG 289
+ + + L+ LP K SP + + E + H
Sbjct: 357 SVKTNLGHLEGAAGIASLIKVALALRHRALPRSLHFKDPSPHIPWAELPVEVIS---EHR 413
Query: 290 VDSLVRGEYPHFDQEKLQTIADNTLEDPH---FKPHLPEPEPLPQYKEHSDRQKPSEPLA 346
S+ G Q ++ ++ L + PEP P +R + A
Sbjct: 414 PWSVAAG------QRRIAGVSALGLSGTNAHVVLEEAPEPARRPVAPGAEERAELLVLSA 467
Query: 347 EHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGER 390
P + +R +++ + ES+ + + H G R
Sbjct: 468 RTPRALSEAAQRLSAQLSSPEAESAGLRALSYSTTCHREHHGHR 511
>gi|271501409|ref|YP_003334434.1| outer membrane autotransporter barrel domain-containing protein
[Dickeya dadantii Ech586]
gi|270344964|gb|ACZ77729.1| outer membrane autotransporter barrel domain protein [Dickeya
dadantii Ech586]
Length = 1075
Score = 38.3 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 82/277 (29%), Gaps = 23/277 (8%)
Query: 16 KEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPN----YYRGSRTDP 71
++W Q + G G +++ A++ +V E D N + G TD
Sbjct: 188 EQWVQSGGSTTGTVISAG-GYQLVKNGAQASGTVVNTGAEGGPDAENSDGMFVSGIATDT 246
Query: 72 HSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLS 131
G +V S AG S + Q + AGAL +
Sbjct: 247 LIHAGGRQIVAAGGSST---GTTIQAGGDQSVHGQAQSTTLDGGNQY--VHAGALATGTT 301
Query: 132 HKAESSIHHQIEGVDKETADALAWREAIVHTSALL-APGAIASQSIAKTVASGAVLNVPF 190
A Q G T + ++ + T A+ + +N
Sbjct: 302 VNAGGWQVVQQSGTADATTVNRDGKLSVSAGGTASNVTLNAGGALVTSTAATVSGIN-SL 360
Query: 191 GMVERGWSSK-----VLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSL 245
G ++ +LE+ G D+ D ++ G++ GG+ V N
Sbjct: 361 GGFNVDAATASATNVLLENGGRLDVLSGGSA-DTTTVSNGGVLAVATGGVAQHIVMNEGG 419
Query: 246 RLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAH 282
L+ D ++ ++ G A H
Sbjct: 420 VLIADSGSTVSGTNTAGTFGIDAATG-----RASNLH 451
>gi|291543810|emb|CBL16919.1| prepilin-type N-terminal cleavage/methylation domain [Ruminococcus
sp. 18P13]
Length = 380
Score = 38.3 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 39/128 (30%), Gaps = 22/128 (17%)
Query: 268 SSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLED---PHFKPHLP 324
S P +F L + P + E++ I ++ H
Sbjct: 88 SKPAQPAAFTPVPLTQQQLDVLAQQRAQSGQPPYTPEQIAAIQKAYMDRQVAAHAASQPA 147
Query: 325 EPEPLPQYK----EHSDRQKPSEPLAE---------------HPHPKRKEVERELSEIEG 365
EP P PQ K E S P + E P P+RK +++E
Sbjct: 148 EPAPQPQVKAPVLEESTYTPPVKEKHEPQVSAAAAASLLEEPAPEPERKVSRFNEADLEA 207
Query: 366 AKKESSAR 373
AK + R
Sbjct: 208 AKANAQKR 215
>gi|258568268|ref|XP_002584878.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906324|gb|EEP80725.1| predicted protein [Uncinocarpus reesii 1704]
Length = 280
Score = 38.3 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 16/132 (12%)
Query: 258 RLPYKHGVKSSSP-GLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLED 316
R+ + + + P G+ + ++ H + E P IA+ ++
Sbjct: 116 RVNFLPALDDAQPNGIASEDESTTLHASPVNAKF------ETPSMPTRAAPVIAEPPIQP 169
Query: 317 PHFKPHLPE----PEPLPQYKEHSDRQ--KPSEPLAEHPHPKRKEVERELSEIEG--AKK 368
P F+P E P P ++ + +PSEP + E ++ +++ A+
Sbjct: 170 PKFQPEPSESTILETPKPVAEDVKSERSTEPSEPKDDLKSQL-DEARVQIQQLKQQVAEN 228
Query: 369 ESSARKFFDEGS 380
E RK EGS
Sbjct: 229 ELRRRKVATEGS 240
>gi|156543722|ref|XP_001605809.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
vitripennis]
Length = 1174
Score = 38.3 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 40/120 (33%), Gaps = 7/120 (5%)
Query: 243 MSLRLVNDLKEGITERLPYKHGVKSSSPGL--HTSFDAYEAHT-DTLAHGVDSLVRGEYP 299
S RL+ D + + E ++ + S GL A+ D + + GEY
Sbjct: 75 SSKRLLEDDELELFEPTETRYAARDQSAGLDEPIDALTASANQLDQIDGNQIEVKPGEYF 134
Query: 300 ----HFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKE 355
E L A + PH P P EP Q + R +PS + P
Sbjct: 135 RNIVPTKSESLSGEARGAPQVPHRHPAGPSSEPREQAPRQARRDQPSARIFSEHAPTAAP 194
>gi|221214518|ref|ZP_03587489.1| outer membrane autotransporter barrel domain protein [Burkholderia
multivorans CGD1]
gi|221165775|gb|EED98250.1| outer membrane autotransporter barrel domain protein [Burkholderia
multivorans CGD1]
Length = 1748
Score = 38.3 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 63/246 (25%), Gaps = 23/246 (9%)
Query: 71 PHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYL 130
V ++ ++ + GA G + + T A L
Sbjct: 879 TGFVAQQLGTLDNRNTVL--LTGAGSTGVVAGTLGTVNNTSTIRVANGTGARVEGASATL 936
Query: 131 SHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPF 190
++ + GV T + + + + A + SG +
Sbjct: 937 ANAGTIEADDGVAGV-HLTGTGASVA---LSGAGSVVANGSADGVLIDATVSGGGIAAGA 992
Query: 191 GMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVND 250
+ G + K +++ G D ++T IG G R+ D
Sbjct: 993 TSIAVGGAGKGIDNVG----------TDSTIVLTGTRIGTTGSGADGIHSTGAGARITTD 1042
Query: 251 LKEGITERLPYKHGVKSS-------SPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQ 303
+ G+ S + G + AH + G +L+ G
Sbjct: 1043 AATVVRTGGDGARGLFVSGAGSTLDATGTTVATAGAGAHAIVVDGGTTALLSGTKLSTTG 1102
Query: 304 EKLQTI 309
I
Sbjct: 1103 IAADGI 1108
>gi|238025169|ref|YP_002909401.1| hypothetical protein bglu_2g18400 [Burkholderia glumae BGR1]
gi|237879834|gb|ACR32166.1| Hypothetical protein bglu_2g18400 [Burkholderia glumae BGR1]
Length = 575
Score = 38.0 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 74/221 (33%), Gaps = 33/221 (14%)
Query: 235 MHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLV 294
M K + + E V +P TS H + +++
Sbjct: 34 MDGKVNAHRPAATAPNPGAVADESTGTSQTV---APTQRTSS-----HALSDLPSTSTVL 85
Query: 295 RGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEH-SDRQKPSEPL--AEHPHP 351
E + I ++ E LP P PQ+ + R+ P + P
Sbjct: 86 AREEAP--PREAPVIRPSSRERSQTAAPLPTATPSPQHSSAPAPRRLPRATTHASSAQGP 143
Query: 352 KRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFD 411
++ R ++ + A ESS+ +FD S G+ ++ L M FT+
Sbjct: 144 EQAPDPRTINAADEADTESSSSIYFDASSS-----FGDMDETLRDMDDVSFTN------- 191
Query: 412 ATTFTESLPHVDEQTMHRFSELKERHPVEAREVLEGLQEKL 452
F+ +L +D+ ++ PV+ L LQ+ L
Sbjct: 192 ---FSNALDRLDDP-----ESAQQLGPVQQDANLSALQQAL 224
>gi|256786302|ref|ZP_05524733.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Streptomyces lividans TK24]
Length = 234
Score = 38.0 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 50/162 (30%), Gaps = 7/162 (4%)
Query: 215 RIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHT 274
R ++ + S V ++K + + PG T
Sbjct: 20 RALGGTPMLIHAVRAMAASRAVSLVVVVAPPDGAGEVKSLLDAHALPERTDFVVVPGGET 79
Query: 275 SFDAYEAHTDTL--AHGVDSLVRGEYPHFDQEKLQTIADNTLED-PHFKPHLPEPEPLPQ 331
++ D L +G+ + P + + + D E P P +P + + Q
Sbjct: 80 RQESVRLGLDALPPEYGIVLVHDAARPLVPVDTVDAVIDAVREGAPAVVPAVPLADTVKQ 139
Query: 332 YKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSAR 373
+ + P EP P+R R + +G + + R
Sbjct: 140 VEPAAA---PGEPEPVVATPERAR-LRAVQTPQGFDRATLVR 177
>gi|221110510|ref|XP_002167498.1| PREDICTED: similar to conserved hypothetical protein, partial [Hydra
magnipapillata]
Length = 2047
Score = 38.0 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 45/139 (32%), Gaps = 16/139 (11%)
Query: 282 HTDTLAHGVDSL-VRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYK------- 333
H L + G H D K + + P H P+P + +
Sbjct: 1258 HLKPEKEAEKPLDLNGHPDHPDHLKPDKETEKPDKYPEPHEHPDHPKPDKETEKPNEYPG 1317
Query: 334 --EHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDE----GSPDHSPFK 387
E+ D S+P E P V +L + K E +K D PDHS
Sbjct: 1318 HHEYLDHLDHSKPEKETEKPLDHMVHPDLPD--HLKPEKETKKPIDHLGFPDQPDHSKPD 1375
Query: 388 GERNQKLDPMRGADFTDAP 406
E + D M D +D P
Sbjct: 1376 RETEKPYDHMGHPDLSDHP 1394
>gi|29830512|ref|NP_825146.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Streptomyces avermitilis MA-4680]
gi|33516907|sp|Q82GC8|ISPD_STRAW RecName: Full=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase; AltName:
Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase;
AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|29607624|dbj|BAC71681.1| putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Streptomyces avermitilis MA-4680]
Length = 250
Score = 38.0 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 7/162 (4%)
Query: 215 RIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHT 274
R + ++ + S V ++K + + PG +
Sbjct: 36 RALNGTPMLIHAVRAMAASRAVSLVVVVAPPDGTAEVKSLLDAHALPERTDFVVVPGGES 95
Query: 275 SFDAYEAHTDTLAHGVDSLV--RGEYPHFDQEKLQTIADNTLED-PHFKPHLPEPEPLPQ 331
++ + D L G+D ++ P + + + + + P P LP + + Q
Sbjct: 96 RQESVKLGLDALPPGIDIVLVHDAARPLVPVDTVDAVIEAVRDGAPAVVPALPLADTVKQ 155
Query: 332 YKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSAR 373
+ + P EP P+R R + +G +++ R
Sbjct: 156 VEPAAV---PGEPEPVVATPERAR-LRAVQTPQGFDRDTLVR 193
>gi|123455460|ref|XP_001315474.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121898152|gb|EAY03251.1| hypothetical protein TVAG_299130 [Trichomonas vaginalis G3]
Length = 450
Score = 38.0 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 5/84 (5%)
Query: 274 TSFDAYEAHTDTLAHGVDSLVRGE-YPHFDQEKLQTIADNTLE----DPHFKPHLPEPEP 328
T YE H V+ + D + P F+ + E
Sbjct: 222 TPIATYELHMREFEGKTTQEVKIPIKFNNDSTSFYVTFTAQMRQPFAKPEFQSKIVEIHS 281
Query: 329 LPQYKEHSDRQKPSEPLAEHPHPK 352
+P +QKP+ P AE P +
Sbjct: 282 IPNGTAVEQQQKPAAPQAESPKQE 305
>gi|78223058|ref|YP_384805.1| pentapeptide repeat-containing protein [Geobacter metallireducens
GS-15]
gi|78194313|gb|ABB32080.1| pentapeptide repeat protein [Geobacter metallireducens GS-15]
Length = 551
Score = 38.0 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 75/286 (26%), Gaps = 37/286 (12%)
Query: 105 PTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSA 164
T L+ G + + G+ ++ ++ G + +
Sbjct: 141 DTGLSSGTGGSTNTGSTDTGSTDTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTG 200
Query: 165 LLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLIT 224
G+ + S + E K D G D R+
Sbjct: 201 STNTGSTNTGSTNTGSTDTGSTDTGSTSTENYPD-KSSSDTGPADKGSSGRVSS------ 253
Query: 225 DGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTD 284
G+ ++ + +G ++ G S +S D +
Sbjct: 254 ---------GLAPSVTSSVDK---GSVDKGSVDKGSADKGSADKSSADKSSADTQGSRIP 301
Query: 285 TLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDR--QKPS 342
+A G L + ++P + +P P+ + D+ Q P+
Sbjct: 302 FVAQGTIILPDAPQSPLEPTSPDA------QEPALGDQPAQWQPSPEAADREDKEHQPPT 355
Query: 343 EPLAEHPHPKR----------KEVERELSEIEGAKKESSARKFFDE 378
P++ H P K V G + + R FDE
Sbjct: 356 APISPHTVPTTSVQEQKYAVFKGVLERFKGYSGDRTPKALRALFDE 401
>gi|221054265|ref|XP_002261880.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808340|emb|CAQ39044.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 703
Score = 37.6 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 297 EYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSE----PLAEHPHPK 352
E P +QE ++ I +EDP + E +P ++ Q+P E P E P +
Sbjct: 332 EDPEKEQEPVEVIQMPAIEDPEKEQEPVEVIQMPAIEDPEKEQEPVEVIQMPAIEDPEKE 391
Query: 353 RKEVE 357
++ VE
Sbjct: 392 QEPVE 396
>gi|46136393|ref|XP_389888.1| hypothetical protein FG09712.1 [Gibberella zeae PH-1]
Length = 479
Score = 37.6 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 62/205 (30%), Gaps = 18/205 (8%)
Query: 11 IRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTD 70
I D I + + P PD + + K I P + + P P G+ D
Sbjct: 138 ITDAIDDGSATPAGEPDDDFFSSWDKPAIKRPTPPVSRTGTPPVVGRTPSPFLNSGNGKD 197
Query: 71 PHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAG---LALQSAPLAAGALY 127
A + ++ A L P A ++ L A +
Sbjct: 198 I---ARTASPLSRTSTGENKPASRITTSAALRKTPASTGPRKANVLGAKKTTKLGAKKVT 254
Query: 128 AYLSHKAESSIHHQIE-------GVDKETADALAWREAIVHTS----ALLAPGAIASQSI 176
A + E+ + E G D + + A + + + +AP ++ S
Sbjct: 255 ADIIDFDEAERKAKEEADRIAKLGYDPDAEEDPATKNSGSAAAIISPTPVAPSRGSASSH 314
Query: 177 AKTVASGAVLNVPFGMVERGWSSKV 201
+ + V + GM R +V
Sbjct: 315 TRQKSDAEVERLGMGM-NRLGFGQV 338
>gi|207092432|ref|ZP_03240219.1| hypothetical protein HpylHP_05773 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 870
Score = 37.6 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 14/234 (5%)
Query: 182 SGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQ 241
V+ + +++G + Y+ F SL D +
Sbjct: 128 YAVVVEQAINKKNELALKTMYKNNGSYKNNEVYKEFSSTSLDADAKVCHRLSSYSGATEN 187
Query: 242 NMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHF 301
N L + + L + ++P +A+ + LA + E
Sbjct: 188 NTPKPLTDQ-----EDLLKTSENLNETTPKPTNLSPLEQANAEKLAKLQREQEQSEQEFL 242
Query: 302 DQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELS 361
++ + L+ Q K + P++ A+ P + + ERE+
Sbjct: 243 KAKEQENKRKEALKKKLEHERGNAGNIESQTKIEVGKDIPTKTQAQLPKSRVRLNEREIY 302
Query: 362 EIEGA--KKESSARKFFDEGSPDHSPFKGER----NQKLDPMR---GADFTDAP 406
+++ A K + F G+ + E+ Q DP + F D P
Sbjct: 303 DLDYAIVKAKDLKPSFTTGGTQKRTDMNEEQIKSIAQNFDPKKIFGSGGFEDLP 356
>gi|270004992|gb|EFA01440.1| hypothetical protein TcasGA2_TC030701 [Tribolium castaneum]
Length = 18024
Score = 37.6 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 292 SLVRGEYPHFDQEKLQTIADN-TLEDPHFK-PHLPEPEPLPQYKEHSDRQKPSEPLAEHP 349
L E +Q +++ L P + P + +P+P+ +E S ++P +P +
Sbjct: 6670 DLKPAEAVPEEQPEVRQWRRGKQLPKPEEEQPEIVSLKPIPRKQEVSQPEQPEQPEVKEQ 6729
Query: 350 HPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGE 389
K +++ R+ K+E + F E P+ P K E
Sbjct: 6730 KIKTQKMIRKSKSHVLPKEEEEGTELFPEEKPELVPTKLE 6769
>gi|88501749|ref|NP_001034245.1| TRIO and F-actin-binding protein isoform 3 [Mus musculus]
gi|90110076|sp|Q99KW3|TARA_MOUSE RecName: Full=TRIO and F-actin-binding protein; AltName: Full=Protein
Tara; AltName: Full=Trio-associated repeat on actin
gi|81176573|gb|ABB59556.1| TRIOBP isoform 3 [Mus musculus]
gi|151358007|emb|CAO78087.1| TRIO and F-actin binding protein [Mus musculus]
Length = 2014
Score = 37.6 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 54/173 (31%), Gaps = 16/173 (9%)
Query: 239 QVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEY 298
Q Q + ERL + KS +PG + D E + + L R
Sbjct: 954 QAQGSNEGRTRSPGRAEVERLFGQERRKSEAPGAFQTRD--EGRSQRPSQAQSQLRRQSS 1011
Query: 299 PHFD------QEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPK 352
P K + P PH P+ P+ R P P +
Sbjct: 1012 PAPSRQVTKPSAKQAEPTRQSRTGP---PHPKSPDKRPEGDRQLQRTSPPARTPARPPER 1068
Query: 353 RKEVERELSEIEGAKKES-----SARKFFDEGSPDHSPFKGERNQKLDPMRGA 400
+ ++ER L ++S S + SP+ P K +QK P G
Sbjct: 1069 KAQIERHLESGHTGPRQSLGGWQSQERLSGPQSPNRHPEKSWGSQKEGPSLGG 1121
>gi|189235987|ref|XP_971849.2| PREDICTED: similar to BMKETTIN [Tribolium castaneum]
Length = 20466
Score = 37.6 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 292 SLVRGEYPHFDQEKLQTIADN-TLEDPHFK-PHLPEPEPLPQYKEHSDRQKPSEPLAEHP 349
L E +Q +++ L P + P + +P+P+ +E S ++P +P +
Sbjct: 6963 DLKPAEAVPEEQPEVRQWRRGKQLPKPEEEQPEIVSLKPIPRKQEVSQPEQPEQPEVKEQ 7022
Query: 350 HPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGE 389
K +++ R+ K+E + F E P+ P K E
Sbjct: 7023 KIKTQKMIRKSKSHVLPKEEEEGTELFPEEKPELVPTKLE 7062
>gi|167533281|ref|XP_001748320.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773132|gb|EDQ86775.1| predicted protein [Monosiga brevicollis MX1]
Length = 305
Score = 37.6 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 33/180 (18%)
Query: 297 EYPHFDQ--------EKLQTIADNTLEDPHF-KPHLPEPEPLPQYKEHSDRQKPSEPLAE 347
E +FD +K+ D+ + + P + + +E D KP++
Sbjct: 4 EDLNFDPTLKKKKKKKKILASFDDEVTESSTDAPEPVSAAAIDENEEEDDLPKPTKVAVV 63
Query: 348 HPHPKRKEVEREL------SEIEGAKKESSARKFFDE-GSPDHSPFKGERNQKLDPMRGA 400
H K V EL ++I+ + + A++ D PD F ++ +K +
Sbjct: 64 HSEDLDKPVSEELVTMLISNDIDYSALKKRAKRSTDALEEPDSLDFSKKKKKKKKTAKAV 123
Query: 401 DFTDAPHAKFDATTFTESLPHVDEQTMHRFSEL--------KERHPVEAREVLEGLQEKL 452
D A + T + DE T+H +S L KE++P E++ G ++K
Sbjct: 124 D-----QAPLEGDAVTSTADDGDEGTVHPYSVLLDRVFAIIKEKNP----ELISGEKKKF 174
>gi|182437805|ref|YP_001825524.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326778440|ref|ZP_08237705.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Streptomyces cf. griseus XylebKG-1]
gi|178466321|dbj|BAG20841.1| putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326658773|gb|EGE43619.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Streptomyces cf. griseus XylebKG-1]
Length = 255
Score = 37.6 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 51/162 (31%), Gaps = 7/162 (4%)
Query: 215 RIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHT 274
R ++ + S V ++K + E + PG T
Sbjct: 38 RALGGTPMLIHAIRAMAASRAVSLVVVVAPPDGAPEVKHLLDEHALPERTDYLVVPGGET 97
Query: 275 SFDAYEAHTDTLAHGVDSLV--RGEYPHFDQEKLQTIADNTLED-PHFKPHLPEPEPLPQ 331
++ D L + +++ P + + +A + P P LP + + +
Sbjct: 98 RQESVRLGLDALPEDISAVLVHDAARPLVPVDTVDAVASAVRDGAPAVVPALPLADTVKE 157
Query: 332 YKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGAKKESSAR 373
+ +P LA P R R + +G +++ R
Sbjct: 158 VEPAGTPGEPEPVLA---TPVRAR-LRAVQTPQGFDRDTLVR 195
>gi|25153045|ref|NP_500704.2| Sperm-Specific family, class Q family member (ssq-4)
[Caenorhabditis elegans]
gi|20451260|gb|AAB04604.3| Sperm-specific family, class q protein 4 [Caenorhabditis elegans]
Length = 373
Score = 37.6 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 33/116 (28%), Gaps = 2/116 (1%)
Query: 88 APYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAE-SSIHHQIEGVD 146
AP + + + G A A+ S + ++I G
Sbjct: 99 APAGGSSTMTAVGGAPRGASTMTAVGGAPVGGSSTMTAVGGAPSGASTMTAIGGAPRGAS 158
Query: 147 KETADALAWREAIVH-TSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKV 201
TA A T+ AP ++ + SGA G RG S+
Sbjct: 159 TMTAVGGAPMGGGSTMTAVGGAPSGASTMTAVGGAPSGASTMTAIGGAPRGASTMT 214
>gi|261252352|ref|ZP_05944925.1| AAA ATPase [Vibrio orientalis CIP 102891]
gi|260935743|gb|EEX91732.1| AAA ATPase [Vibrio orientalis CIP 102891]
Length = 1685
Score = 37.2 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 286 LAHGVDSLVRGEYP-----HFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQK 340
L +D L+ E P D L + D+ LE+ + L ++E D +K
Sbjct: 636 LEAELDDLIGAEQPEPIELGDDAGLLDEVVDSQLENAETAELGDDSTDL--FEELLDIEK 693
Query: 341 PSEPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDE---GSPDHSPFKGERNQKLDPM 397
S AE P+ + + E ++ + K+ S+ F D+ +P+ P E N LD
Sbjct: 694 QSTEQAELETPQPEPISEEALDLADSDKDFSSEDFIDDMLSAAPEADPLLEEIN--LD-- 749
Query: 398 RGADFTDAPHAKFDATTFTESL 419
G D P A D + ES+
Sbjct: 750 EGDDVELEPTANLDIDSLEESI 771
>gi|254509681|ref|ZP_05121748.1| cell division protein FtsZ [Rhodobacteraceae bacterium KLH11]
gi|221533392|gb|EEE36380.1| cell division protein FtsZ [Rhodobacteraceae bacterium KLH11]
Length = 528
Score = 37.2 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 283 TDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPS 342
TL ++ + E H D + D+ L P ++P + + EP P+ S PS
Sbjct: 361 APTLFESIEDVELNEGWHEDSQPAAEQEDDGLPPPAYQPQVAQFEPQPEEPAES-YAAPS 419
Query: 343 EPLAEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSP 385
P P P + ++ A ++ A + G P P
Sbjct: 420 APTPGTPSPAA------MQRLQAAVQKVPASQRRMGGEPPREP 456
>gi|88501743|ref|NP_613045.3| TRIO and F-actin-binding protein isoform 5 [Mus musculus]
gi|84798608|gb|ABB59557.2| TRIOBP isoform 5 [Mus musculus]
gi|151358006|emb|CAO78086.1| TRIO and F-actin binding protein [Mus musculus]
Length = 1968
Score = 37.2 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 54/173 (31%), Gaps = 16/173 (9%)
Query: 239 QVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEY 298
Q Q + ERL + KS +PG + D E + + L R
Sbjct: 954 QAQGSNEGRTRSPGRAEVERLFGQERRKSEAPGAFQTRD--EGRSQRPSQAQSQLRRQSS 1011
Query: 299 PHFD------QEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPK 352
P K + P PH P+ P+ R P P +
Sbjct: 1012 PAPSRQVTKPSAKQAEPTRQSRTGP---PHPKSPDKRPEGDRQLQRTSPPARTPARPPER 1068
Query: 353 RKEVERELSEIEGAKKES-----SARKFFDEGSPDHSPFKGERNQKLDPMRGA 400
+ ++ER L ++S S + SP+ P K +QK P G
Sbjct: 1069 KAQIERHLESGHTGPRQSLGGWQSQERLSGPQSPNRHPEKSWGSQKEGPSLGG 1121
>gi|158294679|ref|XP_315753.4| AGAP005739-PA [Anopheles gambiae str. PEST]
gi|157015677|gb|EAA10955.4| AGAP005739-PA [Anopheles gambiae str. PEST]
Length = 1799
Score = 37.2 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 298 YPHFDQEKLQTIADNTLEDPHFK-PHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEV 356
P KL+ + L+ P FK P + P + + S ++P P P ++
Sbjct: 1085 KPGSKLGKLKNMHMPKLQKPDFKRPEFTKKMPKLKAPDMSKFKRPEMPKFLTEKPDFSKM 1144
Query: 357 ERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFT 416
+ + ++I+ A+ +S E SP + P + DAP K + T F+
Sbjct: 1145 KSDFAKIKLARSKS-----MKEASPSGA------TSAASPSDASMMGDAPTTKVNYTDFS 1193
>gi|294654840|ref|XP_002770038.1| DEHA2A13618p [Debaryomyces hansenii CBS767]
gi|199429189|emb|CAR65414.1| DEHA2A13618p [Debaryomyces hansenii]
Length = 1749
Score = 37.2 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 6/137 (4%)
Query: 132 HKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFG 191
E+ G E D E ++ + + A N+
Sbjct: 1408 SFEETVEILLEAGSAAELDDCRGISENVMLGQMAPLGTGAFDVMVDDKMLQTAPSNIAVT 1467
Query: 192 MVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDL 251
+ + +D G A YR ++M+ GA F +H+ V + S L +
Sbjct: 1468 TAAGNETGEYADDGG----ATPYRDYEMQDDKIQFEEGAGFSPIHTAPVSDGSGALTS-- 1521
Query: 252 KEGITERLPYKHGVKSS 268
G T P +
Sbjct: 1522 YGGATSPSPTSPFSYGA 1538
>gi|107021750|ref|YP_620077.1| Outer membrane autotransporter barrel [Burkholderia cenocepacia AU
1054]
gi|116688696|ref|YP_834319.1| outer membrane autotransporter [Burkholderia cenocepacia HI2424]
gi|105891939|gb|ABF75104.1| Outer membrane autotransporter barrel [Burkholderia cenocepacia AU
1054]
gi|116646785|gb|ABK07426.1| outer membrane autotransporter barrel domain protein [Burkholderia
cenocepacia HI2424]
Length = 1762
Score = 37.2 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 72/283 (25%), Gaps = 17/283 (6%)
Query: 32 TGLGKEVINMPARSLDKLVA--PFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAP 89
G +++ A L A P + + + +E +++
Sbjct: 842 AGATAGIVDGQAHDLAGAAAGAPVATTLTNHAAVTSSTAGVTGFIAQNLGTLENRSTVL- 900
Query: 90 YIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKET 149
+ GA G + + T GAL S ++ + +
Sbjct: 901 -LTGAGSTGVVAGTLGTVNNAST----IRVSNGTGALVQGASATLANAGSIEADDGVAGV 955
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
A + + + A + + +G + + G S + + G
Sbjct: 956 RLTGAGASVALSGAGTVIANGSADGVLIDSTVTGGGIAAGATSIAVGGSGSGIHNLG--- 1012
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSS- 268
A + T G G + ++ ++ + L S
Sbjct: 1013 -ANATIALSGTQVATTG--NGAAGLASTGAGARIATDAATVVRTAGADALGLSVSGADST 1069
Query: 269 --SPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTI 309
+ G + AH + G +L+ G I
Sbjct: 1070 LAANGTTVATTGANAHAIVMDGGATALLSGAKISASGAAADGI 1112
>gi|255547165|ref|XP_002514640.1| conserved hypothetical protein [Ricinus communis]
gi|223546244|gb|EEF47746.1| conserved hypothetical protein [Ricinus communis]
Length = 1094
Score = 37.2 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 312 NTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKR---KEVERELSEIE 364
+ + P EP P Q + QKP++ A+ +P E+E+ L ++E
Sbjct: 411 DLIMKP-ISRLPIEPAPWKQLEGSRASQKPAKLSAKTSNPFPTVYSEIEKRLKDLE 465
>gi|71834474|ref|NP_001025335.1| human immunodeficiency virus type I enhancer binding protein 2
[Danio rerio]
gi|55251090|emb|CAH68883.1| novel protein similar to vertebrate human immunodeficiency virus
type I enhancer binding protein 2 (HIVEP2) [Danio rerio]
Length = 2298
Score = 37.2 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 18/130 (13%)
Query: 255 ITERLPYKHGVKSSSPGLHTSFDAYEAHTD-----------TLAHGVDSLVRGEYPHFDQ 303
++E+ ++ SP H ++ E TL H LVR P+
Sbjct: 751 LSEQSDTENIDDVQSPDSHHRSESMEHQQQGDNEHGSFSSNTLYHMPHKLVR--QPNIQV 808
Query: 304 EKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVER--ELS 361
+++ + + P +P +P EP +E Q+ SE L++ P K ++ L+
Sbjct: 809 PEIRVTEEP--DKPEKEPEVPAKEPEKHVEEFQWPQR-SETLSQLPAEKLPPKKKRLRLA 865
Query: 362 EIEGAKKESS 371
++E + ESS
Sbjct: 866 DMEHSSGESS 875
>gi|195387950|ref|XP_002052655.1| GJ20515 [Drosophila virilis]
gi|194149112|gb|EDW64810.1| GJ20515 [Drosophila virilis]
Length = 424
Score = 36.8 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 12/177 (6%)
Query: 237 SKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
SK + +++ ++ E + + K E ++ V
Sbjct: 80 SKATETKAMKPEPEMGEAADTKSLEQQDTKKKLEAEPELSRPKE--RKSMEKQEK--VAE 135
Query: 297 EYPHFDQEKLQTIADNTLEDPHFKPHLP---EPEPLPQYKEHSDRQKPSEPLAEHPHPKR 353
E P + + + I ++E P + EPE Q K D++ P+EP AE
Sbjct: 136 EKPELEVDTSRKIE--SMEQPETETEPSPKTEPESARQAKAVEDQENPTEPPAEPEAIAS 193
Query: 354 KEVERELSEIEGAKKES--SARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHA 408
E + + +E E + S S K +E P E KL+P A +A H+
Sbjct: 194 MEQQADTNEAEPETETSKGSETKAMEETEIATEP-PAEPETKLEPSNAAQSAEATHS 249
>gi|302895381|ref|XP_003046571.1| hypothetical protein NECHADRAFT_66377 [Nectria haematococca mpVI
77-13-4]
gi|256727498|gb|EEU40858.1| hypothetical protein NECHADRAFT_66377 [Nectria haematococca mpVI
77-13-4]
Length = 479
Score = 36.8 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 15/201 (7%)
Query: 11 IRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTD 70
I D + + + P PD + + K I P + + P P G+ D
Sbjct: 138 ITDAVDDGSATPAGEPDDDFFSSWDKPAIKKPTPPVSRTATPPVMGRTPSPFLNAGNGKD 197
Query: 71 PHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAG--LALQSAPLAAGALYA 128
+ + + P A + R A A ++ L A + +
Sbjct: 198 I-ARASSPLARTASSESKPASRITTSAALRKTGGGIGGPRKANVLGAKKTTKLGAKKVTS 256
Query: 129 YLSHKAESSIHHQIE-------GVDKETADALAWREAIVHTSALLAPGAIAS-----QSI 176
E+ + E G D + + A + A +A+++P ++ S
Sbjct: 257 DAIDFDEAERKAKEEADRIAKLGYDPDAEEDPATKAATGSAAAIISPTPVSPNKSSYSSH 316
Query: 177 AKTVASGAVLNVPFGMVERGW 197
+ + V + GM G+
Sbjct: 317 TRQKSDAEVERLGMGMGRLGF 337
>gi|328865177|gb|EGG13563.1| hypothetical protein DFA_11324 [Dictyostelium fasciculatum]
Length = 1253
Score = 36.8 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 317 PHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIE-GAKKESSARKF 375
P +P P Y + +Q+P+ P A+ P P +++V ++++++ GAK + +
Sbjct: 586 PPKQPAPAPLSQRPVYPQQQQQQRPTAPSAQ-PKPSQQQVVKQVTDMMGGAKFDVNQSTI 644
Query: 376 FD 377
FD
Sbjct: 645 FD 646
>gi|288918412|ref|ZP_06412764.1| hypothetical protein FrEUN1fDRAFT_2460 [Frankia sp. EUN1f]
gi|288350175|gb|EFC84400.1| hypothetical protein FrEUN1fDRAFT_2460 [Frankia sp. EUN1f]
Length = 535
Score = 36.8 bits (83), Expect = 7.5, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 44/142 (30%), Gaps = 4/142 (2%)
Query: 52 PFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRL 111
P R E + RG+R VGTGA A A + G L
Sbjct: 240 PIRTENDLVLTFLRGARAGREPVGTGAGGTTA--DPARDAGSALVFGPGRQLGADQLAAA 297
Query: 112 AGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAI 171
G Q+ A G L + EG D W E +V P A+
Sbjct: 298 FGPVAQTVRAAVGGLLHRRGDLRRRGDLRRREGGDALPGGEAPWPEVVVVGGLGFLPAAV 357
Query: 172 ASQSIAKTVASGAVLNVPFGMV 193
+++ VA ++P G
Sbjct: 358 --EAVRTAVAEAWPADLPGGSG 377
>gi|188591999|ref|YP_001796597.1| branched-chain alpha-keto acid dehydrogenase subunit e2
[Cupriavidus taiwanensis LMG 19424]
gi|170938373|emb|CAP63360.1| Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system [Cupriavidus taiwanensis LMG 19424]
Length = 371
Score = 36.8 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 25/252 (9%)
Query: 60 QPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSA 119
Q G R G GA V + + L+ T + QS+
Sbjct: 114 QFAEVDGIRVRYARKGNGAQTVLFIHGFGGDLDNWLFNLDPLADAYTVVALDLPGHGQSS 173
Query: 120 PLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKT 179
P AG A ++ + G++ + + A+ AP + S ++
Sbjct: 174 PRLAGTTLAQMAGFVARFMD--EAGIEAAHVVGHSMGGGVAAQLAVDAPQRVLSVALVSP 231
Query: 180 VASGAVLNV----PFGMVER-----------GWSSKVLEDHGYPDMAQHYRIFDMESLIT 224
V G +N F + ++ D+ + Y+ D
Sbjct: 232 VGFGEAVNSDYTDGFVKAQSRRELKPVVELLFADPGLVSRQMLDDLLR-YKRLDGVDEAL 290
Query: 225 DGLIGAFFGGMHSKQVQNMSLRLVNDLKE-----GITERLPYKHGVKSSSPGLHTSFDAY 279
L FGG +Q + RL + K G +R+ +++ PG + A
Sbjct: 291 AALGQGLFGG--GRQSEQPGQRLADSGKRVLVVWGAQDRIIPAGHAEAAPPGANVKVFAD 348
Query: 280 EAHTDTLAHGVD 291
H + D
Sbjct: 349 AGHMSQMEKAND 360
>gi|47210024|emb|CAF90899.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1552
Score = 36.8 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 72/207 (34%), Gaps = 16/207 (7%)
Query: 228 IGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLA 287
I A +G + + + N++ P + G + + G S D+ HT
Sbjct: 1137 ISAAYGRGGEARREASGGKHPNEVSLSSLGA-PEEAGDEQTDEGQEFSSDSMSDHT---E 1192
Query: 288 HGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLP--QYKEHSDRQKPSEPL 345
V+ R D + +A + P EP+ P Q ++ + ++ ++
Sbjct: 1193 SAVEPARRPAAETLDPTERLDLAMEAISLP---EQPAEPKEEPGAQTEDERNEEEMAQRK 1249
Query: 346 A---EHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKG----ERNQKLDPMR 398
A E + +E+ R E ++ A SP +P G P R
Sbjct: 1250 ALLLEKQQKRAEELRRRKQWHEQERENRLASSERRADSPSATPPAGTTSPSPTPPATPAR 1309
Query: 399 GADFTDAPHAKFDATTFTESLPHVDEQ 425
DFT + +A+ E L V +Q
Sbjct: 1310 RGDFTRSEYARRQQLRIMEDLDKVLQQ 1336
>gi|307182327|gb|EFN69609.1| STE20-like serine/threonine-protein kinase [Camponotus floridanus]
Length = 1661
Score = 36.8 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 38/223 (17%)
Query: 239 QVQNMSLRLVNDLKEGITERLPY--KHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ ++ L L + RL K K + L TS E+H +
Sbjct: 329 RTSHLPLELDQITDDSAPTRLDAEIKITDKENIATLPTSLKKEESHKREINR-------- 380
Query: 297 EYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEV 356
D ED + + L + + + Q PS + P P +
Sbjct: 381 --------------DGEKEDKN--------KRLRKAESKENIQPPSAEKKQAPKPPNETS 418
Query: 357 ERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFT 416
ER LS +G + D +G N D + + TD + D +
Sbjct: 419 ERRLSRDKGPAPPPPPMR-QDSEEKKKKDVEGRENVSKDVEKIVNLTDKQKSAEDKSQIN 477
Query: 417 ESLPHVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIK 459
+ LP +E+ + + + + E+ +E +Q +L G+ ++K
Sbjct: 478 K-LPQ-NEKMVDQVTNVAEQRNLETE---NQMQNELDGSGKVK 515
>gi|221061793|ref|XP_002262466.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
gi|193811616|emb|CAQ42344.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
Length = 920
Score = 36.8 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 23/161 (14%)
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVD---SLVRGEYPHFD--- 302
D ++ E H + + L+ + + ++ GVD L E H +
Sbjct: 603 PDDRDQTEEPSQTNHIDQDVTTFLNVQAEGEDEWASAMSQGVDPSVQLEEKEESHMEKTE 662
Query: 303 QEKLQTIADNTLEDPHFKPHLP----------------EPEPLPQYKEHSDRQKPSEPLA 346
Q+ L E LP E EPLPQ ++ + EP A
Sbjct: 663 QDNLALQESANEEGGAINDELPQEENEPMNGEADGGKAEDEPLPQQEDEGVAIEMVEP-A 721
Query: 347 EHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFK 387
+ P + ++ EL E AK++ + E P P K
Sbjct: 722 KEDIPTEEPIKEELPIDEPAKEDIPTEEPIKEELPIDEPAK 762
>gi|255279787|ref|ZP_05344342.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255269560|gb|EET62765.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 842
Score = 36.8 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 6/180 (3%)
Query: 100 LLSFIPTPLTRLAGLALQSAPLAAG-ALYAYLSHKAESSIHHQIEGVDKETADALAWREA 158
L + A LA + LA G + A S + S G + ++ +
Sbjct: 625 LYTAFGQVTEGAASLAEGAEALAEGNSALAEGSEELYSGTKSLASGAKQLSSGSKE---- 680
Query: 159 IVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFD 218
+ + A GA QS A ++A G + G + L+D + D
Sbjct: 681 LASGAGSAAKGASQLQSGAGSLA-GGADALRQGAGSLYSGTITLQDGATQLYDGTVELSD 739
Query: 219 MESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDA 278
S + DG++ G K N + D+ E I E + + SF +
Sbjct: 740 GVSELYDGVVELKDGTAELKDGTNEFVEKTQDIDETIDEEIDKAVDKIAGGDFEPVSFTS 799
>gi|157849706|gb|ABV89636.1| catalytic/coenzyme binding protein [Brassica rapa]
Length = 624
Score = 36.8 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 8/108 (7%)
Query: 259 LPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPH 318
PY P T + +DTLA GE T+A E+
Sbjct: 472 SPYASYENLKPPSSPTPKASGIQKSDTLAPVPTDSDTGES--------STVATTVTEEAE 523
Query: 319 FKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGA 366
P +P+ PL Y ++D + P+ P PK+ E+SE+ G
Sbjct: 524 APPAIPKMRPLSPYAAYADLKPPTSPTPASTGPKKTAPAEEISELPGG 571
>gi|74199130|dbj|BAE33111.1| unnamed protein product [Mus musculus]
Length = 1330
Score = 36.4 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 10/170 (5%)
Query: 239 QVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEY 298
Q Q + ERL + KS +PG + D E + + L R
Sbjct: 392 QAQGSNEGRTRSPGRAEVERLFGQERRKSEAPGAFQTRD--EGRSQRPSQAQSQLRRQSS 449
Query: 299 PHFDQEKLQTIADN---TLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKE 355
P ++ + A T + PH P+ P+ R P P ++ +
Sbjct: 450 PAPSRQVTKPSAKQAEPTRQSRTGSPHPKSPDKRPEGDRQLQRTSPPARTPARPPERKAQ 509
Query: 356 VERELSEIEGAKKES-----SARKFFDEGSPDHSPFKGERNQKLDPMRGA 400
+ER L ++S S + SP+ P K +QK P G
Sbjct: 510 IERHLESGHTGPRQSLGGWQSQERLSGPQSPNRHPEKSWGSQKEGPSLGG 559
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.302 0.115 0.277
Lambda K H
0.267 0.0355 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,190,407,485
Number of Sequences: 14124377
Number of extensions: 279338330
Number of successful extensions: 1005180
Number of sequences better than 10.0: 1438
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 1557
Number of HSP's that attempted gapping in prelim test: 998021
Number of HSP's gapped (non-prelim): 6785
length of query: 478
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 335
effective length of database: 2,823,007,719
effective search space: 945707585865
effective search space used: 945707585865
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.4 bits)
S2: 83 (36.8 bits)