HHsearch results for GI: 254781210 and protein with PDBid: 2xd8_A
>2xd8_A GP10, T7-like capsid protein; marine podovirus, T7-like virus, virus; 4.60A {Prochlorococcus phage p-ssp7}
Probab=100.00 E-value=0 Score=413.79 Aligned_cols=317 Identities=11% Similarity=0.013 Sum_probs=252.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCC---CCCEEEEEECCCCCH
Q ss_conf 79998867789999987112430100230312674068713462355332589874324568---762699982344311
Q gi|254781210|r 9 TANIYEFKKHVELALQETKSKLRPTVTEQATEGEASALVEVFKPTEAHEIVGDMPDTIYNAT---DQDRRWVGHSQFGWA 85 (343)
Q Consensus 9 ~aFv~q~~~~v~~a~qqk~s~L~~~V~~~t~~~Gks~~f~~~G~~~A~~~t~r~~~t~~~~~---~~~~~~v~~~~~~~a 85 (343)
+.|+|+|+.||+.+||++ ++|+++|++|++.+||+.+||++|+.++.||+++..+++.... ..++++.++++++++
T Consensus 28 alflkifs~EV~~af~~~-sv~~~lv~~r~i~~Gks~~fp~~g~~ta~~~~~g~~i~~~~~~~~~~~e~~itID~~~~~s 106 (375)
T 2xd8_A 28 ALYLKLFSGEMFKGFQHE-TIARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISS 106 (375)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHEEEEECCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHH
T ss_conf 331787689999999986-5455232676437985797300384122110688744566666565315999737402578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC------CEEEECCCCCCCCCCH
Q ss_conf 2212688887410068999999999987768899999862014556666654456666------4023023577642228
Q gi|254781210|r 86 ERIDPFATLDSGINPLLPYASLATAAMHRKQDEAILKGMLGVNKKGKIGAETEFFSKE------NILSAVEGDDFFKTFI 159 (343)
Q Consensus 86 ~~IddiDe~k~~~d~rs~y~~~~g~ALar~~D~~I~~a~~g~a~~~~~g~~~~~~~~~------~~~~~~~~~~~~~lt~ 159 (343)
++||||||+|+|+|+|++|++++||||+|++|+.|++.+.+++++............. ......+..++....+
T Consensus 107 ~~idDide~~sh~d~r~~~t~~aGyALA~~~D~~vl~~l~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
T 2xd8_A 107 AFVYDLDETLAHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSATNFVEPGGTQIRVGSGTNESDAFTASALV 186 (375)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 87877999874725999999999999999999999999865203567654466544455311344444555555567799
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCCC---CEEEHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCC
Q ss_conf 99999999860238897546079976999998750671---010000013431136701227435899707778766665
Q gi|254781210|r 160 GQLITAKSIFRKRYIDVDSEQVYVLIPSDVWASLFALE---RATSKDYINTAALQAGKIEAFAGVWFINMEKVPGNDLFP 236 (343)
Q Consensus 160 akl~~a~~~ld~~~Vp~~g~~~~~v~~p~~~~~Ll~~t---~~~s~Df~~~~al~~G~I~~~~G~~~i~s~~lp~~~~~~ 236 (343)
+.|+++++.||++|||++ +||||+||.+|+.||++. ++.+.|+.+...+.+|.|++++||++|+|||||..+...
T Consensus 187 ~~i~~a~~~LDe~dVP~~--~R~~Vv~P~~y~~Ll~~~~~~~~~~~~~~~~~~~~~g~vg~i~G~~v~~Snn~P~~~~~~ 264 (375)
T 2xd8_A 187 NAFYDAAAAMDEKGVSSQ--GRCAVLNPRQYYALIQDIGSNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYG 264 (375)
T ss_pred HHHHHHHHHHHHCCCCCC--CEEEEECHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCC
T ss_conf 999999999876499955--618998899999997120021020343346532256651256116899933436644456
Q ss_pred CCCCCCCCCCCCCCC--------CCCCCCCC---CCCCCCCCCCCEEEEEEECCCCEEEEECCCEEEE---EECCCCCCH
Q ss_conf 444333334565566--------77766666---6665455655137999845410344513531565---541653203
Q gi|254781210|r 237 AGTKFPGLIDGKVEY--------PNGKPTVK---SSAKFEDTKIKYVLPIYCKSAVVFTQRKAIDVQH---SKDPGKWHA 302 (343)
Q Consensus 237 ~~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~~~~~~hksAvg~a~~~di~~ei---~~~~~k~~a 302 (343)
............... ......++ ....+...+++++|++|||+|||+++++|+++|. +|+++ |++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~s~~~gl~fhk~Avgtv~~~~~~~e~Te~~~~~~-~~~ 343 (375)
T 2xd8_A 265 VKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTNGDVSVI-YQG 343 (375)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHEEEEEECCEEEEEECCCCHH-HHH
T ss_conf 5557655445556555544455333445565335655434456513899975358244445132357630244446-567
Q ss_pred HEEEHEECCCCEEECCCCEEEEEECHH
Q ss_conf 300010002635654152589995413
Q gi|254781210|r 303 PQITLTSSFGATRIEPDKILGIEISKD 329 (343)
Q Consensus 303 ~~i~~~~s~Ga~~l~~~~vv~I~~~e~ 329 (343)
++|+++|+||++.||||++|+|...-+
T Consensus 344 dl~~~~~a~G~~vLRpe~~v~i~~~~~ 370 (375)
T 2xd8_A 344 DVILGRMAMGADYLNPAAAVELYIGAT 370 (375)
T ss_pred HHHHHHHHCCCCCCCCCEEEEEECCCC
T ss_conf 789888764666458440799970688