HHsearch results for GI: 254781210 and protein with PDBid: 3iyh_A
>3iyh_A Coat protein, protein GP5; HK97-like fold, capsid protein, late protein, virion, virus; 8.20A {Enterobacteria phage P22} PDB: 3iyi_A
Probab=99.51 E-value=1.2e-12 Score=89.19 Aligned_cols=198 Identities=11% Similarity=-0.034 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCC-CCCCCEEEEEECCC-CCHHHHH
Q ss_conf 988677899999871124301002303126740687134623553325898743245-68762699982344-3112212
Q gi|254781210|r 12 IYEFKKHVELALQETKSKLRPTVTEQATEGEASALVEVFKPTEAHEIVGDMPDTIYN-ATDQDRRWVGHSQF-GWAERID 89 (343)
Q Consensus 12 v~q~~~~v~~a~qqk~s~L~~~V~~~t~~~Gks~~f~~~G~~~A~~~t~r~~~t~~~-~~~~~~~~v~~~~~-~~a~~Id 89 (343)
|+-|+....++ +.-.++|+.-.... ..|.+...|+..+..+.. +...+++. ++....+-++++.+ ..+..++
T Consensus 17 le~~~~~~v~a--r~~~~y~~~~~~~~-r~GdtI~~p~p~~~~~~d---G~~~t~q~~d~~e~~v~~tl~~~k~V~~~~~ 90 (430)
T 3iyh_A 17 IETISAITPMA--QKAKKYTPPAASMQ-RSSNTIWMPVEQESPTQE---GWDLTDKATGLLELNVAVNMGEPDNDFFQLR 90 (430)
T ss_pred HHHHHHHHHHH--HHHHCCCCHHHHHH-HCCCEEEECCCCCEEECC---CCCCCCCCCCEEEEEEEEECCCEEEEEEEEC
T ss_conf 99887534877--66541598788776-436768740777302136---5545678676145666686254201358977
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf 68888741006899999999998776889999986201455666665445666640230235776422289999999986
Q gi|254781210|r 90 PFATLDSGINPLLPYASLATAAMHRKQDEAILKGMLGVNKKGKIGAETEFFSKENILSAVEGDDFFKTFIGQLITAKSIF 169 (343)
Q Consensus 90 diDe~k~~~d~rs~y~~~~g~ALar~~D~~I~~a~~g~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~lt~akl~~a~~~l 169 (343)
+.|.. ..+....+.+-+..+|+.++|..|+..+....... .++..+ +.+........+-.+.++|
T Consensus 91 s~El~--~~~~~eril~PAm~~LA~~Ve~dL~~~~~~~~~~v-v~~~~t------------a~~~~~~~~sd~A~a~~~L 155 (430)
T 3iyh_A 91 ADDLR--DETAYRRRIQSAARKLANNVELKVANMAAEMGSLV-ITSPDA------------IGTNTADAWNFVADAEEIM 155 (430)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-ECCCCC------------CCCCCCHHHHHHHHHHHHH
T ss_conf 77850--14567789999999999999999999886422313-226777------------7887760688887787888
Q ss_pred HHCCCCCCCCEEEEECCHHHHHHHHCCCC-EEEHHCCCCCCCCCCCEEE-EEEEEEEEECC-CCC
Q ss_conf 02388975460799769999987506710-1000001343113670122-74358997077-787
Q gi|254781210|r 170 RKRYIDVDSEQVYVLIPSDVWASLFALER-ATSKDYINTAALQAGKIEA-FAGVWFINMEK-VPG 231 (343)
Q Consensus 170 d~~~Vp~~g~~~~~v~~p~~~~~Ll~~t~-~~s~Df~~~~al~~G~I~~-~~G~~~i~s~~-lp~ 231 (343)
+++.+|+.+ +|++++.|..+..|..... +-..+-...+++++|.|++ |+||+|+++++ +|.
T Consensus 156 ~~~g~p~~~-~R~~v~~p~~~~~la~~l~~l~~~~~~~~~Ayr~g~Igr~~aGfd~~ms~~~~p~ 219 (430)
T 3iyh_A 156 FSRELNRDM-GTSYFFNPQDYKKAGYDLTKRDIFGRIPEEAYRDGTIQRQVAGFDDVLRSPKLPV 219 (430)
T ss_pred HHCCCCCCC-CCEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCC
T ss_conf 646899867-8579868999999866553112434554999984411212341204553576641