BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781213|ref|YP_003065626.1| head-to-tail joining protein,
putative [Candidatus Liberibacter asiaticus str. psy62]
(556 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781213|ref|YP_003065626.1| head-to-tail joining protein, putative [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040890|gb|ACT57686.1| head-to-tail joining protein, putative [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120678|gb|ADV02501.1| putative phage-related head-to-tail joining protein [Liberibacter
phage SC1]
gi|317120822|gb|ADV02643.1| putative phage-related head-to-tail joining protein [Candidatus
Liberibacter asiaticus]
Length = 556
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 556/556 (100%), Positives = 556/556 (100%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL
Sbjct: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG
Sbjct: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT
Sbjct: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS
Sbjct: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL
Sbjct: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL
Sbjct: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL
Sbjct: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD
Sbjct: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR
Sbjct: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
Query: 541 AMEKKLTHDMMENSYG 556
AMEKKLTHDMMENSYG
Sbjct: 541 AMEKKLTHDMMENSYG 556
>gi|226940462|ref|YP_002795536.1| Bbp21 [Laribacter hongkongensis HLHK9]
gi|226715389|gb|ACO74527.1| Bbp21 [Laribacter hongkongensis HLHK9]
Length = 555
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 122/553 (22%), Positives = 219/553 (39%), Gaps = 37/553 (6%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTTGSEACI 55
K + R+ LK +R E++ +L P ++D TG+ A
Sbjct: 8 KRVSARWEALKKERSSWMSHWSEISDYLLPRSGRFFVEDRNKGNKRHKNIYDNTGTRALR 67
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
L++ + + +T P + W L S + S V+ W VT + ++
Sbjct: 68 VLAAGMMAGMTSPARPWFRLTTSD--------PQLDESAAVKAWLADVTRIMQMV--FAK 117
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
S L S Y + FGT + D + I + + ++ +++ V+++
Sbjct: 118 SNTYRALHSCYEELGAFGTAGTIVLPDFN-----GVIHHHVLTAGEFAIAADYRGQVNTL 172
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALAR-NENERFTIIHAVYPKSLTD-KKKDKGNKG 233
YREF TV Q+V ++G S+ ++ R +E T+IHA+ P++ ++D N
Sbjct: 173 YREFQMTVGQMVGEFGLSACSATVQRLHERWCLDEWITVIHAIEPRTDRHKGRQDARNMA 232
Query: 234 FHSKFVSVD--ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
+ S + E + E FP + R+ +IYG SPAME+L I++L
Sbjct: 233 WRSVYFEPGNREGQVLRESGFREFPALCPRWSTSGGDIYGNSPAMESLGDIKQLQHEQLR 292
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPLPYHEEL 350
Q PP S + R+ D PG ++ + + G + ++
Sbjct: 293 KGQVIDYKTKPPLQVPSSMRARDIDTLPGGVSFVDAGTPNGGIRSAFEVGLDLSHLLADI 352
Query: 351 NRLKESIRSLFLLDLFQVLDDK--ASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
++E I+ F DLF +L + +A E E+ EK +GP++ L +E + +I
Sbjct: 353 QDVRERIKGSFYADLFLMLANGSNPQMTATEVAERHEEKLLMLGPVLERLHNEILDPLIE 412
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
+ G +P L VE+ S L + Q+A + S + V + +
Sbjct: 413 MTFSRMVEAGIVPPPPEELQG--VDLNVEFVSMLAQAQRAIATNSVDRFVGNLGAVAG-- 468
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
P +D D DR + LI V IRQQR ++ ++ + Q
Sbjct: 469 IKPEVLDKFDADRWADAYADMLGIDPELIVPGDRVALIRQQRAQAQQAQQQAAMLQMGAD 528
Query: 529 TSQDIGAKAAGRA 541
+Q +G+ +
Sbjct: 529 AAQKLGSVDTSQP 541
>gi|242279813|ref|YP_002991942.1| hypothetical protein Desal_2347 [Desulfovibrio salexigens DSM 2638]
gi|242122707|gb|ACS80403.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
Length = 555
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 146/564 (25%), Positives = 238/564 (42%), Gaps = 43/564 (7%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTTGSEACIK 56
R L+ +R ++++ ++ P K ++ D+T + A
Sbjct: 8 QYLRRLQGLRQERNSWESHWQDISDYILPRKGVYDGHRPNDGRVRSGKIIDSTATRALRI 67
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L++ L +T P + W L S ++ AR K VREW +V +T++ R +RS
Sbjct: 68 LAAGLQGGLTSPARPWFRLGISD--------RDLARHKSVREWISKVENTMY--RALARS 117
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
F C+ S YT + FGTG Y E D E GIR+ ++ ++ + Q VD+VY
Sbjct: 118 NFYSCIHSLYTELAGFGTGILYCEPD-----DERGIRFRTLTAGEYCLATDAQGRVDTVY 172
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK-KDKGNKGFH 235
REF T Q+ ++G + L + + S+L N + F ++H V P+ D D N F
Sbjct: 173 REFKMTARQLEKRFGMQNLPATVHSSLNMNRDHWFDVLHVVQPRDEFDIALMDTMNMPFE 232
Query: 236 SKF-VSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQ 294
S F ++ E PY+ R+ A ++YGRSPAM+ L ++ L E Q
Sbjct: 233 SVFLLNGHGGHVLSESGFMENPYMAPRWDTSAMDVYGRSPAMDVLADVKMLMEMSKSQIQ 292
Query: 295 FGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP--LPYHEELNR 352
L+L PP R +L PG N +++ P+ P ++
Sbjct: 293 AVHLTLRPPMKVP-SMYSRRLNLLPGGQNPVEQNQQ--DSVSPLYQVRPDLAGVSNKIQD 349
Query: 353 LKESIRSLFLLDLFQVLDDKASR--SAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
++ +IR F D+F ++ R +AAE E+ EK +GP+I +E + +I R
Sbjct: 350 VRTAIREGFYNDIFMMMAGTNRRTITAAEVAERHEEKLIQLGPVIERQHTELLDPLIDRV 409
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
IL G LPE + +K++Y S L + Q+ S V L +
Sbjct: 410 FGILMRSGQLPEAPSVLEG--ADIKIDYISVLAQAQKMVGTQSIQSLAQFVGNLAKA--N 465
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTS 530
P +D +D DR P ++R EVE +R R + M + Q Q +
Sbjct: 466 PEVLDKVDMDRAVDDYAELIGVPNGIVRSGDEVEKLRNMR----KDMLIKEQQLQQSLQA 521
Query: 531 QDIGAKAAGRAMEKKLTHDMMENS 554
+GA L ++M+
Sbjct: 522 ASMGAGIVKDLSYSGLNPELMQGM 545
>gi|187476929|ref|YP_784953.1| phage head-tail connector protein [Bordetella avium 197N]
gi|115421515|emb|CAJ48024.1| Putative phage head-tail connector protein [Bordetella avium 197N]
Length = 555
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 129/556 (23%), Positives = 232/556 (41%), Gaps = 37/556 (6%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTTGS 51
Q K + R+ LK +R +E++ +L P + D TG+
Sbjct: 4 QTERKLLLSRWGQLKAERESWISHWKEISDYLLPRSGRFFINDRNRGGKRHNNILDNTGT 63
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
A L++ + + +T P + W L S E S V+ W VT +
Sbjct: 64 RALRVLAAGMMAGMTSPARPWFRLTTS--------IPELDESAAVKAWLANVTRLMLMV- 114
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
++S L S Y + FGT + D ++ IR+ ++ ++ ++Q
Sbjct: 115 -FAKSNTYRALHSTYEELGLFGTASSIVLPDF-----KDVIRHHTLSAGEYAIAADNQGR 168
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNE-NERFTIIHAVYPKSLTDK-KKDK 229
VD++YREF TV Q+V ++G S+ +++ R + T+IHA+ P++ D K+D
Sbjct: 169 VDTLYREFQITVAQMVREFGKDKCSTTVRNLFDRGALEQWVTVIHAIEPRADRDPNKRDD 228
Query: 230 GNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
N + S +V DE R E +F + R+ + +IYG SPAMEAL +R+L
Sbjct: 229 RNMAWKSVYVELGADETRTLRESGYRSFRALCPRWALAGGDIYGNSPAMEALGDVRQLQH 288
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPLPY 346
AQ +PP AK ++ PG ++ ++ + + +
Sbjct: 289 EQLRKAQGIDYKSNPPLQLPVSAKNQDISTVPGGLSYVDVAAPNGGIRTAFEVNLDLSHL 348
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKAS--RSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
++ ++E I++ F DLF +L + + +A E E+ EK +GP++ + +E +
Sbjct: 349 LADIVDVRERIKASFYADLFLMLANGTNPKMTATEVAERHEEKLLMLGPVLERMHNEILD 408
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
+I + LP L VE+ S L + Q+A + S + V + +
Sbjct: 409 PLIELTFQRMVEANILPPPPQEMQG--VDLNVEFVSMLAQAQRAIATNSVDRFVGNLGVV 466
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQ 524
P +D + DR + LI +V IR+QR Q++ ++ L
Sbjct: 467 AK--IKPEVLDKFNADRWADTYADMLGIDPELIVPGNQVALIRKQRAEQQQAAQQAALLN 524
Query: 525 QLQQTSQDIGAKAAGR 540
Q T+ +G+ +
Sbjct: 525 QGADTAAKLGSVDTSK 540
>gi|327252184|gb|EGE63856.1| bbp21 [Escherichia coli STEC_7v]
Length = 559
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 131/559 (23%), Positives = 237/559 (42%), Gaps = 40/559 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D D + IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLEDDD-----DIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP IA + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMIAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSA--AESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ +L P +D ++ D+ + +I +VE RQQR Q++ +
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVEQARQQRAQQQQQQQMM 520
Query: 521 HLQQQLQQTSQDIGAKAAG 539
+ Q ++ +
Sbjct: 521 EMGMAAAQGAKTLSEAKTS 539
>gi|301019343|ref|ZP_07183529.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299882260|gb|EFI90471.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 559
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 130/559 (23%), Positives = 237/559 (42%), Gaps = 40/559 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEANRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSA--AESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEG--IPLKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ +L P +D ++ D+ + +I +VE RQQR Q++ +
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVEQARQQRAQQQQQQQMM 520
Query: 521 HLQQQLQQTSQDIGAKAAG 539
+ Q ++ +
Sbjct: 521 AVGMAAAQGAKTLSEAKTS 539
>gi|117624712|ref|YP_853625.1| putative tail protein [Escherichia coli APEC O1]
gi|115513836|gb|ABJ01911.1| putative tail protein [Escherichia coli APEC O1]
Length = 559
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 122/523 (23%), Positives = 222/523 (42%), Gaps = 38/523 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q +PP +A + + ++ L PG + L Q
Sbjct: 286 LQLLQKRKSQIIDKVTNPPMVAPTTLRTQSVSLLPGGVTYVDQLTGQEGLRPVYQVNPNT 345
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSE 401
++ +++I S + +DLF +L + +RS +E EK +GP++ L E
Sbjct: 346 ADLISDIQDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLNDE 405
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ +I R ++ + LP A LKVEY S + + Q++ ++S VN +
Sbjct: 406 CLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNFI 463
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+L G P +D ++ D+ + +I +VE
Sbjct: 464 GQLA--QGKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|294492610|gb|ADE91366.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|323948685|gb|EGB44590.1| hypothetical protein ERKG_04908 [Escherichia coli H252]
Length = 559
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 123/524 (23%), Positives = 223/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRSFSMMVRKNMLPPPPDVMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|300898427|ref|ZP_07116768.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300357894|gb|EFJ73764.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 559
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 122/524 (23%), Positives = 222/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEFGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDVMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|89152428|ref|YP_512261.1| putative head-to-tail-joining protein [Escherichia phage phiV10]
gi|74055451|gb|AAZ95900.1| putative head-to-tail-joining protein [Escherichia phage phiV10]
Length = 559
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 123/524 (23%), Positives = 223/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLDD-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRSFSMMVRKNMLPPPPDVMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQV--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|323156133|gb|EFZ42292.1| bbp21 [Escherichia coli EPECa14]
Length = 559
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 224/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIDVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|324008560|gb|EGB77779.1| hypothetical protein HMPREF9532_01747 [Escherichia coli MS 57-2]
Length = 559
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 224/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRSFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|331648176|ref|ZP_08349266.1| conserved hypothetical protein [Escherichia coli M605]
gi|331043036|gb|EGI15176.1| conserved hypothetical protein [Escherichia coli M605]
Length = 559
Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 224/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|298381718|ref|ZP_06991317.1| hypothetical protein ECFG_01455 [Escherichia coli FVEC1302]
gi|298279160|gb|EFI20674.1| hypothetical protein ECFG_01455 [Escherichia coli FVEC1302]
Length = 559
Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 223/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNNSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|301046408|ref|ZP_07193568.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300301634|gb|EFJ58019.1| conserved hypothetical protein [Escherichia coli MS 185-1]
Length = 559
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 224/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEANRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|218700990|ref|YP_002408619.1| putative head-to-tail-joining protein [Escherichia coli IAI39]
gi|218370976|emb|CAR18803.1| putative head-to-tail-joining protein [Escherichia coli IAI39]
Length = 559
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 130/559 (23%), Positives = 236/559 (42%), Gaps = 40/559 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNNSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ +L P +D ++ D+ + +I +VE RQQR Q++ +
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVEQARQQRAQQQQQQQMM 520
Query: 521 HLQQQLQQTSQDIGAKAAG 539
+ Q ++ +
Sbjct: 521 AMGMVAAQGAKTLSEAKTS 539
>gi|320175046|gb|EFW50159.1| putative tail protein [Shigella dysenteriae CDC 74-1112]
Length = 559
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 223/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 M--FNESNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A + K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|332344354|gb|AEE57688.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 559
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 123/524 (23%), Positives = 222/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDYGP--------VKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + + + Y++ + +
Sbjct: 113 M--FNKSNLYQSLPQLYGSLGTYSTGAMAVLED-----DEDIIRTMPFTIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP +A K + L PG + + F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPISLKNQRASLLPGDITYIDQITG-QDGFRPAYLVNPS 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|315122900|ref|YP_004063389.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496302|gb|ADR52901.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 555
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 396/555 (71%), Positives = 458/555 (82%), Gaps = 1/555 (0%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
MN S K I+ F +LK+QR ELN MEELT LYPYK + RMWDTTGSEACIKLSSL
Sbjct: 1 MN-NSIKKIKTCFEHLKSQREELNTRMEELTSLLYPYKQEPKSRMWDTTGSEACIKLSSL 59
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LSSLITPPGQKWHGL+E F +QAFLY+EDA +KK+R WCDQVTD LFGFRERSRSGFV
Sbjct: 60 LSSLITPPGQKWHGLSEPFFRHQAFLYEEDAGAKKIRGWCDQVTDVLFGFRERSRSGFVS 119
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
CLQSFYTS+VEFGTGCFY+EADVDE GLEEGIRYI+VPL++VY+SVNHQN VDS+YR F
Sbjct: 120 CLQSFYTSIVEFGTGCFYIEADVDETGLEEGIRYIAVPLADVYLSVNHQNEVDSIYRTFE 179
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
FT +QI KWG KVLS KMKS+ + E ++F IIHAVYPKSL +KKKDKGNK FHSKFV
Sbjct: 180 FTAEQIGGKWGYKVLSDKMKSSYEKKEPDKFKIIHAVYPKSLAEKKKDKGNKNFHSKFVC 239
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
+DEN FFEEKQI T PYI+GRYRVRADEIYG+SPAMEALP IRRLNE NELAQ+ RLSL
Sbjct: 240 IDENVFFEEKQITTLPYIIGRYRVRADEIYGKSPAMEALPAIRRLNEISNELAQYARLSL 299
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
HP +A +EAKQ F +K ++N GA+S++G++LFQP+Q GNPLP++EEL R++ SI SL
Sbjct: 300 HPAYLAPTEAKQLEFKIKSRHINTGAMSKDGKALFQPLQVGNPLPFYEELKRIQGSIHSL 359
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI RELDILD+Q NL
Sbjct: 360 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIKRELDILDAQHNL 419
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
PE D+ P LLKVEYTSPLFKYQQAESVAS LQG NTV+ELG KTG+P MDH+D D
Sbjct: 420 PELTDYDHSPFHLLKVEYTSPLFKYQQAESVASVLQGTNTVLELGAKTGNPEPMDHIDID 479
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
+VSRF+LWA+ +PA LIRD EV+ R+ R+ Q M+ + QQ +Q + GAKA +
Sbjct: 480 KVSRFALWASGSPAHLIRDVDEVKQRRKDRDDQMEAMQNRQDAQQQEQMGMEAGAKAVSK 539
Query: 541 AMEKKLTHDMMENSY 555
A+EKK+T+D+MENSY
Sbjct: 540 AIEKKMTNDLMENSY 554
>gi|41179382|ref|NP_958690.1| Bbp21 [Bordetella phage BPP-1]
gi|45569514|ref|NP_996583.1| hypothetical protein BMP-1p20 [Bordetella phage BMP-1]
gi|45580765|ref|NP_996631.1| hypothetical protein BIP-1p20 [Bordetella phage BIP-1]
gi|40950121|gb|AAR97687.1| Bbp21 [Bordetella phage BPP-1]
Length = 555
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 128/559 (22%), Positives = 230/559 (41%), Gaps = 38/559 (6%)
Query: 1 MNQRS-AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDT 48
M +++ K + R+ L+ +R +E++ +L P + D
Sbjct: 1 MAEQTERKLLLSRWGQLRTERESWMSHWKEISDYLLPRAGRFFVQDRNRGEKRHNNILDN 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
TG+ A L++ + + +T P + W L S E S V+ W VT +
Sbjct: 61 TGTRALRVLAAGMMAGMTSPARPWFRLTTS--------IPELDESAAVKAWLANVTRLML 112
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
++S L S Y + FGT + D D + + S+ ++ ++
Sbjct: 113 MI--FAKSNTYRALHSMYEELGAFGTASSIVLPDFDA-----VVYHHSLTAGEYAIAADN 165
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNE-NERFTIIHAVYPKSLTDK-K 226
Q V+++YREF TV Q+V ++G S+ ++S R + T+IHA+ P++ D K
Sbjct: 166 QGRVNTLYREFQITVAQMVREFGKDKCSTTVQSLFDRGALEQWVTVIHAIEPRADRDPSK 225
Query: 227 KDKGNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+D N + S + DE R E +F + R+ + +IYG SPAMEAL +R+
Sbjct: 226 RDDRNMAWKSVYFEPGADETRTLRESGYRSFRALCPRWALVGGDIYGNSPAMEALGDVRQ 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NP 343
L AQ +PP AK ++ PG ++ + + + +
Sbjct: 286 LQHEQLRKAQAIDYKSNPPLQLPVSAKNQDISTVPGGLSYVDAAAPNGGIRTAFEVNLDL 345
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDK--ASRSAAESMEKTREKGAFVGPLIGGLQSE 401
++ ++E I++ F DLF +L + +A E E+ EK +GP++ + +E
Sbjct: 346 SHLLADIVDVRERIKASFYADLFLMLANGTNPQMTATEVAERHEEKLLMLGPVLERMHNE 405
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ +I + LP L VE+ S L + Q+A + S + V +
Sbjct: 406 ILDPLIELTFQRMVEANILPPPPQEMQG--VDLNVEFVSMLAQAQRAIATNSVDRFVGNL 463
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
+ P +D D DR + LI +V IR+QR Q++ ++
Sbjct: 464 GAVAG--IKPEVLDKFDADRWADTYADMLGIDPELIVPGNQVALIRKQRADQQQAAQQAA 521
Query: 522 LQQQLQQTSQDIGAKAAGR 540
L Q T+ +G+ +
Sbjct: 522 LLNQGADTAAKLGSVDTSK 540
>gi|315121938|ref|YP_004062427.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495340|gb|ADR51939.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 555
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 399/555 (71%), Positives = 457/555 (82%), Gaps = 1/555 (0%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
MN S K I+ F +LK+QR ELN MEELT LYPYK + RMWDTTGSEACIKLSSL
Sbjct: 1 MN-NSIKKIKTCFEHLKSQREELNTRMEELTSLLYPYKQEPKSRMWDTTGSEACIKLSSL 59
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LSSLITPPGQKWHGL+E F +QAFLY+EDA +KK+R WCDQVTD LFGFRERSRSGFV
Sbjct: 60 LSSLITPPGQKWHGLSEPFFRHQAFLYEEDAGAKKIRGWCDQVTDVLFGFRERSRSGFVS 119
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
CLQSFYTS+VEFGTGCFY+EADVDE GLEEGIRYI+VPL++VY+SVNHQN VDS+YR F
Sbjct: 120 CLQSFYTSIVEFGTGCFYIEADVDETGLEEGIRYIAVPLADVYLSVNHQNEVDSIYRTFE 179
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
FT +QI KWG KVLS KMKS+ + E ++F IIHAVYPKSL +KKKDKGNK FHSKFV
Sbjct: 180 FTAEQIGGKWGYKVLSDKMKSSYEKKEPDKFKIIHAVYPKSLAEKKKDKGNKNFHSKFVC 239
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
+DEN FFEEKQI T PYI+GRYRVRADEIYG+SPAMEALP IRRLNE NELAQ+ RLSL
Sbjct: 240 IDENVFFEEKQITTLPYIIGRYRVRADEIYGKSPAMEALPAIRRLNEISNELAQYARLSL 299
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
HP +A EAKQ F K YMNIGA+S++G++LFQP+Q GNPLP++EEL R++ SI SL
Sbjct: 300 HPAYLAPPEAKQLEFKNKSRYMNIGAMSKDGKALFQPLQVGNPLPFYEELKRIQGSIHSL 359
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI RELDILD+Q NL
Sbjct: 360 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIKRELDILDAQHNL 419
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
PE D+ P LLKVEYTSPLFKYQQAESVAS LQG NTV+ELG KTG+P MDH+D D
Sbjct: 420 PELTDYDHSPFHLLKVEYTSPLFKYQQAESVASVLQGTNTVLELGAKTGNPEPMDHIDID 479
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
+VSRF+LWA+ +PA LIRD EV+ R+ R+ Q M+ + QQ +Q + GAKA +
Sbjct: 480 KVSRFALWASGSPAHLIRDVDEVKQRRKDRDDQMEAMQNRQDAQQQEQMGMEAGAKAVSK 539
Query: 541 AMEKKLTHDMMENSY 555
A+EKK+T+D+MENSY
Sbjct: 540 AIEKKMTNDLMENSY 554
>gi|215487822|ref|YP_002330253.1| predicted phage head-tail connector protein [Escherichia coli
O127:H6 str. E2348/69]
gi|215265894|emb|CAS10303.1| predicted phage head-tail connector protein [Escherichia coli
O127:H6 str. E2348/69]
Length = 556
Score = 386 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 120/530 (22%), Positives = 214/530 (40%), Gaps = 38/530 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + LKN+R +L+ F+ P + ++ D T
Sbjct: 1 MAETEKERLLKQLAQLKNERTSFESHWRDLSDFINPRGSRFLTSDVNRDDRRNTKIVDPT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
GS A LSS + S IT P + W LA + V+ W + V +
Sbjct: 61 GSMAQRILSSGMMSGITSPARPWFKLATPDPDMMDYGP--------VKIWLEVVQRRMNE 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ FGTG + D ++ IR + P+ + Y++ + +
Sbjct: 113 V--FNKSNLYQSLPVMYASLGTFGTGAMAVLED-----DQDVIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTD-KKK 227
VD+ R+F+ TV Q+V ++G +S+ +K E + H + P D K
Sbjct: 166 GSVDTCIRQFSMTVRQMVQEFGLDNVSTSVKGMWENGTYETWVKVNHCITPNVNRDSGKM 225
Query: 228 DKGNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK + S + D ++ E FP + R+ V +++Y S P M AL ++
Sbjct: 226 DSKNKPYRSVYFESGGDSDKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L AQ + +PP +A + K + L PG + +
Sbjct: 286 LQVEQKRKAQLIDKATNPPMVAPTSLKNQRVSLLPGDVTYLDVLTGQDGFKPAYLVNPNT 345
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSE 401
++ +++I S + +DLF +L +RS +E EK +GP++ L E
Sbjct: 346 ADLLADIQDTRQTINSAYFVDLFMMLQKINTRSMPVEAVIEMKEEKLLMLGPVLERLNDE 405
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ +I R I+ + LPE L++EY S + + Q++ + S Q V +
Sbjct: 406 ALNPLIDRVFSIMARKNMLPEPPDVLQGMP--LRIEYISVMAQAQKSIGLTSLSQTVGFI 463
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQRE 511
+L P +D +D D+ + +I +V+ IR++R
Sbjct: 464 GQLAQ--FKPEALDKLDVDQAIDAFSEMSGVSPTVIVPQEQVQGIREERA 511
>gi|30387383|ref|NP_848212.1| hypothetical protein epsilon15p04 [Enterobacteria phage epsilon15]
gi|30266038|gb|AAO06067.1| 4 [Salmonella phage epsilon15]
Length = 556
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 120/530 (22%), Positives = 215/530 (40%), Gaps = 38/530 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + LKN+R +L+ F+ P + ++ D T
Sbjct: 1 MAETEKERLLKQLAQLKNERTSFESHWLDLSDFINPRGSRFLTSDVNRDDRRNTKIVDPT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
GS A LSS + S IT P + W LA + V+ W + V +
Sbjct: 61 GSMAQRILSSGMMSGITSPARPWFKLATPDPDMMDYGP--------VKIWLEVVQRRMNE 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ FGTG + D ++ IR + P+ + Y++ + +
Sbjct: 113 V--FNKSNLYQSLPVMYASLGTFGTGAMAVMED-----DQDVIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTD-KKK 227
VD+ R+F+ TV Q+V ++G +S+ +K E + H + P D K
Sbjct: 166 GSVDTCIRQFSMTVRQMVQEFGLDNVSTSVKGMWENGTYETWVEVNHCITPNVNRDSGKM 225
Query: 228 DKGNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK + S + D ++ E FP + R+ V +++Y S P M AL ++
Sbjct: 226 DSKNKPYRSVYFESGGDSDKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L AQ + +PP +A + K + L PG + +
Sbjct: 286 LQVEQKRKAQLIDKATNPPMVAPTSLKNQRVSLLPGDVTYLDVISGQDGFKPAYLVNPNT 345
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSE 401
++ +++I S + +DLF +L + +RS +E EK +GP++ L E
Sbjct: 346 ADLLADIQDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLNDE 405
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ +I R I+ + LPE L++EY S + + Q++ + S Q V +
Sbjct: 406 ALNPLIDRVFSIMARKNMLPEPPDVLQGMP--LRIEYISVMAQAQKSIGLTSLSQTVGFI 463
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQRE 511
+L P +D +D D+ + +I +V+ IR++R
Sbjct: 464 GQLAQ--FKPEALDKLDVDQAIDAFSEMSGVSPTVIVPQEQVQGIREERA 511
>gi|291336934|gb|ADD96462.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured organism
MedDCM-OCT-S09-C787]
Length = 450
Score = 383 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 103/464 (22%), Positives = 207/464 (44%), Gaps = 27/464 (5%)
Query: 34 LYPYKNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARS 93
+ ++D + ++ L++ L ++T P W L F +
Sbjct: 11 TRSKGDKRTELIFDGSPLQSVELLAASLHGMLTNPSTPWFSLR--------FKQNDMENE 62
Query: 94 KKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIR 153
+ +EW + T+ ++ ++S F + Y ++ FGT ++E D E+ ++
Sbjct: 63 DEAKEWLEDATEVMYS--AFNKSNFQQEIFELYHDLITFGTAAMFIEED-----DEDILK 115
Query: 154 YISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTI 213
+ + ++ ++++ N + +D+V+R+F+ + ++ K+GD +S + + ++ E I
Sbjct: 116 FSTRHINEIFIAENDKGRIDTVFRKFSLSARAVMQKFGD--VSINIATKAKKDPYEEVEI 173
Query: 214 IHAVYPKSLTDK-KKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGR 272
+HAVYP+S D K+DK N F S ++ + FP++V RY + EIYGR
Sbjct: 174 MHAVYPRSDFDPRKQDKENMPFESVYLDAESGDELSVSGFREFPFVVPRYLKASHEIYGR 233
Query: 273 SPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGR 332
SPAM ALP ++ LNE + + + PP + + PG +N R
Sbjct: 234 SPAMTALPDVKMLNEMSKTTIKSAQKQVDPPLLVPDDGFMLPVRTIPGGLNFYR--AGTR 291
Query: 333 SLFQPVQFGNPLPYHEEL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFV 391
+ + G P + + + SIR+ F ++ ++ +A E +++ EK +
Sbjct: 292 DRIETLNIGANTPLGLNMEEQRRNSIRNAFYVNQL-MMQSGPQMTATEVIQRNEEKMRLL 350
Query: 392 GPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESV 451
GP++G LQSE + +I R ++ + +++EY SPL K Q++ +
Sbjct: 351 GPVLGRLQSELLKPLIDRTFALILRKNLFRPAPEFLAGQD--IEIEYVSPLAKAQKSTEL 408
Query: 452 ASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAV 495
+S ++ + + L DH++ D++ R P
Sbjct: 409 SSIMRAIEILGSLSNVA---PVFDHINMDKLVRHLADIVGVPQK 449
>gi|317152045|ref|YP_004120093.1| Bacteriophage head-to-tail connecting protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316942296|gb|ADU61347.1| Bacteriophage head-to-tail connecting protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 603
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 130/523 (24%), Positives = 210/523 (40%), Gaps = 33/523 (6%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-------------AQLRMWDT 48
+ A+ +Q RF L+ R EL+ ++ P KN+ R++D+
Sbjct: 3 AKELARSLQTRFKGLEEARQPWLAAWRELSDYMLPRKNSFTGIDPGSTRGRSGDERIFDS 62
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
T S A L+S L L+T P W + + VR + Q + +
Sbjct: 63 TPSHALELLASSLGGLLTNPAMPWFDIRARD--------PDQGDGAGVRTFLQQARERMI 114
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
+GF + Y V GT Y+EAD D +R+ + PL VY + +
Sbjct: 115 ALFNTEDTGFQTNVHELYLDVALLGTAVMYVEADPD-----TVVRFCTRPLGEVYAAESA 169
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK-K 227
+ VDSVYR +T + Q +WG S + + ++ I+HAV+P++ D
Sbjct: 170 RGAVDSVYRRYTLSARQTAREWG-AACSGETRRKAEERPDDTVEILHAVFPRTDRDPYGV 228
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
+ F S +V EE PY+V R+ A E YGR P AL R LN
Sbjct: 229 GAAHFPFASVYVETGAEHVLEESGYLEMPYLVPRWAKAAGETYGRGPGQTALSDTRVLNA 288
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH 347
PP + + PG ++ R PV +
Sbjct: 289 MARTALMAAEKMSDPPLMVPDDGFLGPVHSGPGGLSYYRAGSPDRIEPLPVNV-DLAATE 347
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ + +ESIR +FL D + + +A E++ + EK +GP++G LQ+EF+ +I
Sbjct: 348 TMMQQRRESIRRIFLGDQLTP--EGPAVTATEALIRQSEKMRVLGPVLGRLQAEFLSPLI 405
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R I+ G LP P ++V YTSP+ + Q+ + + + L
Sbjct: 406 RRVFRIMLRAGALPPFPQGFGPDD--IEVRYTSPVARAQKEFEARGLSRTMEYLAPLVGA 463
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
+ MD+ DTDR +R TP+ +R +V + R +
Sbjct: 464 SDPFGIMDNFDTDRAARHVAELFGTPSDYLRPEKDVAETRAAK 506
>gi|304398403|ref|ZP_07380277.1| phage head-tail connector protein [Pantoea sp. aB]
gi|304354269|gb|EFM18642.1| phage head-tail connector protein [Pantoea sp. aB]
Length = 553
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 136/573 (23%), Positives = 236/573 (41%), Gaps = 41/573 (7%)
Query: 1 MNQRSAKD-IQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDT 48
M + + K + + LK++R + +L+ ++ P N + D
Sbjct: 1 MAEETLKQRLNKQLGLLKSERTTFDPHWRDLSDYISPRSSRFLVSDANRDNRRNTNIVDP 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
T + A LSS + S IT P + W L+ S A + + V+ W + V +
Sbjct: 61 TCTLAERTLSSGMMSGITSPARPWFTLSVSDPAMKDYGP--------VKVWLEDVQRRMN 112
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
++S L Y + +GT + D E+ IR P+ + Y+S +
Sbjct: 113 EV--FNKSNLYQSLPIVYAQLGTYGTAAMAILED-----DEDIIRTYPFPIGSYYVSNSA 165
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLT-DKK 226
+ VD+VYREF T Q+V ++G +S +K A E +IHAVYP K
Sbjct: 166 RLSVDTVYREFRMTTRQLVEQFGLDNVSETVKGQWATQNTESWHDVIHAVYPNVSRQTGK 225
Query: 227 KDKGNKGFHSKFVSV-DENRFFEEKQIATFPYIVGRYRVRADEIYGR-SPAMEALPTIRR 284
D NK + S + +++ E FP + R+ V ++ YG P M AL ++
Sbjct: 226 MDAKNKRYKSVYFEKAGDDKVLRESGFDEFPILAPRWEVNGEDAYGSNCPGMTALGQVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L +Q + +PP + S K + PG + G+ +P+ NP
Sbjct: 286 LQLEQKRKSQLIDKATNPPMVGPSSLKTQRVSQLPGAVTYVD-QLTGQDGLKPLYMVNPN 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSA--AESMEKTREKGAFVGPLIGGLQS 400
++ ++ IRS + +DLF +L + +RS E EK +GP++ L
Sbjct: 345 TADLLNDIQDTRDIIRSAYFVDLFLMLQNINTRSMPVEAVNELREEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
EF+ +I R I+ +G LP + L++EY S + + Q++ V S + V
Sbjct: 405 EFLDPLIDRAFAIMQRKGMLPPAPEVLQG--TALRIEYISVMAQAQKSIGVNSMERFVGF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
V + P +D +D D++ + +I EV+ IRQQR Q + ++
Sbjct: 463 VGGMAQA--KPEALDKLDIDKIIDSYGDSIGVSPSVIVPDEEVQKIRQQRAEQIQQQQQM 520
Query: 521 HLQQQLQQTSQDIGAK-AAGRAMEKKLTHDMME 552
+ Q +++D+ G L M +
Sbjct: 521 QMAQAAVASAKDLSQANLEGPNALSALAGGMQQ 553
>gi|309702812|emb|CBJ02143.1| putative phage protein [Escherichia coli ETEC H10407]
Length = 559
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 116/523 (22%), Positives = 209/523 (39%), Gaps = 38/523 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYP-----------YKNNAQLRMWDTT 49
M + + + + LK++R +L+ F+ P + ++ D T
Sbjct: 1 MAETEKERLLKQLAQLKSERTSFESHWRDLSDFINPRGSRFLTSDVNRDDRRNTKIIDPT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
GS A LSS + S IT P + W LA + V+ W + V +
Sbjct: 61 GSMAQRILSSGMMSGITSPARPWFKLATPDPDMMDYGP--------VKVWLEVVQRRMNE 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ FGT + D ++ IR + P+ Y++ + +
Sbjct: 113 V--FNKSNLYQSLPVMYASLGTFGTAAMAVLED-----DQDVIRTMPFPIGCYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTD-KKK 227
VD+ +R+F+ TV Q+V ++G +SS ++ E + H + P D K
Sbjct: 166 GSVDTSFRQFSMTVRQLVQEFGLDNVSSSVQGMWQNGTYETWIEVNHCITPNVNRDTGKM 225
Query: 228 DKGNKGFHSKFVSVDE--NRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + ++ E FP + R+ V +++Y S P M AL ++
Sbjct: 226 DSKNKPFRSVYFETGGDADKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L AQ + +PP +A + K + L PG + +
Sbjct: 286 LQVEQKRKAQLIDKATNPPMVAPTSLKTQRVSLLPGDVTYLDVLSGQDGFKPAYLVNPNT 345
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSE 401
++ +++I S + +DLF +L + +RS +E EK +GP++ L E
Sbjct: 346 ADLLADIQDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLNDE 405
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ +I R ++ + LP A LKVEY S + + Q++ ++S VN +
Sbjct: 406 CLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNFI 463
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+L P +D ++ D+ + +I +VE
Sbjct: 464 GQLAQA--KPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|262043566|ref|ZP_06016679.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039100|gb|EEW40258.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 560
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 115/522 (22%), Positives = 206/522 (39%), Gaps = 38/522 (7%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYP-----------YKNNAQLRMWDTTG 50
+ + +Q + L N R + EL+ F+ P + ++ D T
Sbjct: 3 AETLKEQLQKQQAQLTNDRSSFDPHWRELSDFINPRGSRFLVTDVNRDDRRNTKIVDPTA 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ A LSS + S IT P + W LA + V+ W + V +
Sbjct: 63 TLAARTLSSGMMSGITSPARPWFKLATPDPDMMDYGP--------VKLWLEVVQRRMNEV 114
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
++S L Y S+ + TG + D + IR + P+ + YM+ + +
Sbjct: 115 --FNKSNIYQSLPLLYASLGNYSTGAMAVLEDDS-----DVIRTMMFPIGSYYMANSARG 167
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDK-KKD 228
VD+ +R+F+ TV Q+V ++G +S +K E +IHAVYP D K +
Sbjct: 168 SVDTCFRKFSMTVRQLVMEFGLNNVSDSVKGMWDSGNYESWIEVIHAVYPNIDRDTAKLN 227
Query: 229 KGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRL 285
NK S + V D ++ E FP + R+ V +++YG S P M AL ++ L
Sbjct: 228 SKNKPVKSVYYEVGGDSDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGQVKAL 287
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP-L 344
+Q + +PP + S + + L PG +
Sbjct: 288 QLEQKRKSQLIDKATNPPMVGPSSLRNQRVSLLPGDITYIDQVTGQDGFKPAYLVNPNTA 347
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEF 402
++ ++ I S + +DLF +L + +RS +E EK +GP++ L E
Sbjct: 348 DLLADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLNDEC 407
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ +I R I+ + LP L++EY S + + Q++ ++S V +
Sbjct: 408 LNPLIDRTFSIMARKNLLPPPPDVLQGMP--LRIEYISVMAQAQKSIGLSSLSSTVGFIG 465
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+L P +D ++ D+ + +I +VE
Sbjct: 466 QLAQA--KPEALDKLNVDQAIDAFAEMSGVSPTVIVPQEQVE 505
>gi|310005679|gb|ADP00067.1| head-tail connector protein [Cyanophage 9515-10a]
Length = 534
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 84/561 (14%), Positives = 168/561 (29%), Gaps = 57/561 (10%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYP---YKNNA------QLRMWDTTGSEACIK 56
K+ + R+N L R + E P +N+ W + G++ +
Sbjct: 1 MKNARQRYNKLSTDREQFLNVAYECAELTIPTLLMRNDKPPAYAQFKTPWQSVGAKGVVT 60
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L+S L + PP + L S + E ++ ++ + + S
Sbjct: 61 LASKLMLGLLPPSTSFFKLQLDDSKLGIEIPPEAKS--EMDLSFAKIERQIMD--AIAAS 116
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
+ S +V G YM PL+ + + V +
Sbjct: 117 TDRVQIFSAIKHLVVTGNALLYMGKQG----------MKMYPLNRYVVERDGNGDVIEIV 166
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHS 236
+ + D I + D + N ++ + V K +H
Sbjct: 167 TKEKVSRDLIPIELNDD----SVVDDDTNNADKDVDVYTCV--------KLGAKGWYWHQ 214
Query: 237 KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
+ + + P++ R+ E YGRS E L ++ L + L +
Sbjct: 215 EVHDILIPGSEGKAPKDKNPFLPLRFVTVDGEDYGRSRVEEFLGDLKSLEALMQALVEGS 274
Query: 297 RLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKES 356
+ + + L GA+ + +Q G + +
Sbjct: 275 AAAAKVVFTVSPSSVTKPGTLANAG--NGAIIQGRPDDIGVIQVGKTADFRTAFELVNTL 332
Query: 357 IRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDS 416
+ L L + +A E E +G L L +EF+ ++R++ L
Sbjct: 333 EKRLSEAFLILNVRQSERTTAEEVRMTQMELEQQLGGLFSLLTTEFLIPYLNRKMHSLTL 392
Query: 417 QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDH 476
+P+ P V + L + Q +++ V V + G + +
Sbjct: 393 AKKIPKIPKNVVNPTI---VAGINALGRGQDRDAL------VQFVTTIAQTMGPEALAQY 443
Query: 477 MDTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGA 535
++ D + A L++ E++ +QQ + Q Q G
Sbjct: 444 INPDEAIKRLAAAQGIDVLNLVKSMEELDAQKQQAQQ----------QAMQQNLMGQAGQ 493
Query: 536 KAAGRAMEKKLTHDMMENSYG 556
A M+ ++ME G
Sbjct: 494 LAGAPLMDPSKNPEVMEALPG 514
>gi|61806424|ref|YP_214201.1| T7-like head-to-tail connector [Prochlorococcus phage P-SSP7]
gi|61374349|gb|AAX44203.1| T7-like head-to-tail connector [Prochlorococcus phage P-SSP7]
gi|265525461|gb|ACY76227.1| head-tail connector protein [Prochlorococcus phage P-SSP7]
Length = 522
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 74/557 (13%), Positives = 168/557 (30%), Gaps = 54/557 (9%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY--KNNAQLRM--------WDTTGSEACIKL 57
++R+N L R E + PY ++ R W + G++ C+ L
Sbjct: 2 KARERYNQLTTARQMFLDKAVECSELTLPYLIDDDISSRPNHKSLTVPWQSVGAKCCVTL 61
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
++ L + PP + L L + ++ ++ + + + S
Sbjct: 62 AAKLMLAVLPPQTSFFKLQVRDDKLGEELDPQIRS--ELDLSFSKMERMIMDY--IAASN 117
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ ++ G +M D + PL+ ++ + V +
Sbjct: 118 DRVAVHQALKHLIVGGNALIFMGKDG----------LKTFPLTRYVINRDGDGNVLEIVT 167
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ + + + + ++ + + N++ V + K G +H +
Sbjct: 168 KELISRKVLDIELPEPKPNTGIDESSTTNDD--------VTIYTYVKLDKSSGRWVWHQE 219
Query: 238 FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
P++ R+ E YGR E L ++ L+ L +
Sbjct: 220 AFDKIIPDSRSTAPKNASPWLPLRFNTVDGEDYGRGRVEEFLGDLKSLDGLSQSLIEGAA 279
Query: 298 LSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
+ + + + + GA+ + +Q G + N
Sbjct: 280 AASKVVFLVSPSSTTKPATIAKAG--NGAIVQGRPEDVAVIQVGKTADFSTAANMATAIE 337
Query: 358 RSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
+ L L + + +A E E +G + L EF+ ++R L +L
Sbjct: 338 KRLLEAFLVMNVRNAERVTAEEVRLTQLELEQQLGGIFSLLVIEFLIPYLNRTLLVLQRS 397
Query: 418 GNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+P+ P V + L + Q ES+ + V + G + M ++
Sbjct: 398 NQIPKLPKDIVRPTI---VAGVNALGRGQDRESLTA------FVGTIAQTLGPEALMQYL 448
Query: 478 DTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAK 536
+ + A L++ ++ + +Q + Q Q G
Sbjct: 449 NPLEAIKRLAAAQGIDVLNLVKTEQQLAEEQQAAQQ----------QAAQQSLVDQAGQM 498
Query: 537 AAGRAMEKKLTHDMMEN 553
M+ +M+
Sbjct: 499 TGSPLMDPTKNPQLMDE 515
>gi|310005857|gb|ADP00242.1| head-tail connector protein [Cyanophage Syn26]
Length = 521
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 75/554 (13%), Positives = 169/554 (30%), Gaps = 54/554 (9%)
Query: 11 DRFNYLKNQRGELNYWMEELTGFLYPY--KNNAQLRM--------WDTTGSEACIKLSSL 60
+++N L + R + + + PY ++ R W + G++ + L++
Sbjct: 5 EKYNQLSSARRQFLDKAVQCSELTLPYLIDDDISSRPNHKSLAVPWQSVGAKCVVTLAAK 64
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
L + PP + L L + ++ ++ + + + S
Sbjct: 65 LMLAVLPPQTSFFKLQVRDDKLGQELDPQIRS--ELDLSFAKMERMIMEY--IAASNDRV 120
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ ++ G YM D + PL+ + + V + +
Sbjct: 121 AIHQALKHLIVGGNALIYMHKDG----------LKTFPLTRYVVERDGDGNVLCIVTKEL 170
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
+ + + + +S + +E ++ V ++ KD G +H +
Sbjct: 171 ISRKVLDIELPEPEPNSVV--------DESHSVADDVTIYTMVKLDKDSGRWVWHQEAFD 222
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
P++ R+ E YGR E L ++ L+ L + +
Sbjct: 223 KIIPDTRSTAPKKASPWLPLRFNTVDGEDYGRGRVEEFLGDLKSLDGLSQALIEGAAAAS 282
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
+ + + + GA+ + +Q G + N + + +
Sbjct: 283 KVIFLVSPSSTTKPATIAKAG--NGAIVQGRPEDVAVIQVGKTADFATAANMAQGIEKRM 340
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
L + + +A E E +G + L EF+ ++R L +L +
Sbjct: 341 LEAFLVMNVRNAERVTAEEVRLTQLELEQQLGGIFSLLTVEFLIPYLNRTLLVLQRSNQI 400
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
P+ P V + L + Q ES+ + + G + M +++
Sbjct: 401 PKLPKDIVRPTI---VAGVNALGRGQDRESLT------QFIGTIAQTLGPEALMQYINPQ 451
Query: 481 RVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAG 539
+ A L++ ++ + Q + QQ Q G A
Sbjct: 452 EAIKRLAAAQGIDVLNLVKTEQQMAEEMQAAQA----------QQTQQSLVDQAGQLAGT 501
Query: 540 RAMEKKLTHDMMEN 553
M+ MM
Sbjct: 502 PLMDPSKNPQMMPE 515
>gi|291335391|gb|ADD95005.1| head tail connector protein [uncultured phage MedDCM-OCT-S04-C24]
Length = 526
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 155/503 (30%), Gaps = 46/503 (9%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQL----------RMWDTTGSEACIKLSS 59
+ R++ L + R + + + PY W +TG++ + L+S
Sbjct: 4 KQRYDRLSSSRSQFLNAARQASELTIPYLIREDEHTTKGALKLTTPWQSTGAKGVVTLAS 63
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L + PP + L + L E ++ ++ T+ + SG
Sbjct: 64 KLMLALLPPQTSFFKLQVNDVNLPDELGPEIRS--ELDLSFAKIERTVME--SIAESGDR 119
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
+ +V G +M D PL+ + + V + +
Sbjct: 120 VVVHQALKHLVVAGNALIFMSKDG----------LKLYPLNRYVVDRDGNGNVIEIVTKE 169
Query: 180 TFTVDQIVSKWGD--KVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
T + I + + + +E H K D +H +
Sbjct: 170 TISKKLIKKFYPEYEDKAQDSVVDDGHIPNDECVIYTHV---------KLDNNRWVWHQE 220
Query: 238 FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
+ + P++V R+ E+YGR E L ++ L + +
Sbjct: 221 LEGKILPKSMGKAPFDANPWLVLRFNHVDGEVYGRGRVEEFLGDLKSLEALSQAIVEGSA 280
Query: 298 LSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
+ + + L GA+ + VQ G + +
Sbjct: 281 AAAKVVFTVSPSSTTKPQTLAKAG--NGAIIQGRPEDIGVVQVGKTADFSTAYQMIGSLT 338
Query: 358 RSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
+ L L + D +A E E +G L L EF+ ++R+L++
Sbjct: 339 QRLNEAFLILNVRDSERTTAEEVRMTQLELEQQLGGLFSLLTVEFLVPYLNRKLNVAQKT 398
Query: 418 GNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
G++P ++ V + L + Q ES+A + + G + ++
Sbjct: 399 GDIPRLPQGGIVRPTI--VAGINALGRGQDRESLA------QFLTVIAQTMGPDAIAQYI 450
Query: 478 DTDRVSRFSLWATNTPA-VLIRD 499
+ D V + ++ L++
Sbjct: 451 NPDEVIKRLAASSGIDVLNLVKS 473
>gi|291334411|gb|ADD94066.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured phage
MedDCM-OCT-S04-C1035]
Length = 467
Score = 372 bits (954), Expect = e-100, Method: Composition-based stats.
Identities = 111/484 (22%), Positives = 217/484 (44%), Gaps = 27/484 (5%)
Query: 64 LITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQ 123
++T P W L F ++ + + W + T+ ++ ++S F +
Sbjct: 1 MLTNPSTPWFSL--------KFKNEDMEGEDEAKLWLESATEVMYS--AFNQSNFQQEIF 50
Query: 124 SFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTV 183
Y ++ FGT ++E D ++ +++ + ++ +Y+S N + +D+V+R+F +
Sbjct: 51 ELYHDLITFGTAAMFIEEDDEDN-----LKFSTRHINEIYISENEKGRIDTVFRKFRISA 105
Query: 184 DQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-DKGNKGFHSKFVSVD 242
+ K+G +S+ + ++ E I+HAVYP+ + KK D N F S ++ D
Sbjct: 106 RAAIRKFG--NVSNNIAVIAKKDPYEEVEILHAVYPRDDYNPKKQDTENMQFESIYLDAD 163
Query: 243 ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
FP++V RY + EIYGRSPAM ALP ++ LNE + + + + P
Sbjct: 164 SGEELSVSGFREFPFVVPRYLKASHEIYGRSPAMTALPDVKMLNEMSKTIIKSAQKQVDP 223
Query: 303 PTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL-NRLKESIRSLF 361
P + + PG +N R +P+ G + + + SIR+ F
Sbjct: 224 PLLVPDDGFLLPVRTVPGGLNFYR--AGTRDRIEPLNIGANNTLGLNMEEQRRNSIRNAF 281
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
++ ++ D +A E +++ EK +GP++G LQSE + +I R IL +
Sbjct: 282 YVNQL-MMQDGPQMTATEVIQRNEEKMRLLGPVLGRLQSELLKPLIDRSFAILMRRNLFA 340
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+ + +++EY SPL K Q++ ++S ++ + + L DH++ D+
Sbjct: 341 QPPEFLSGQD--IEIEYVSPLAKAQKSTELSSIMRAIEIMGSLSNVA---PVFDHINMDK 395
Query: 482 VSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRA 541
+ R P +++ +E+ RQ + Q+ M++ QQL + + A
Sbjct: 396 LVRHLTNIVGVPQKILKPQSELNAERQAQAQQQEQMQQMQQVQQLAEAGGKVAPLAKALP 455
Query: 542 MEKK 545
E +
Sbjct: 456 EEAQ 459
>gi|212710818|ref|ZP_03318946.1| hypothetical protein PROVALCAL_01886 [Providencia alcalifaciens DSM
30120]
gi|212686515|gb|EEB46043.1| hypothetical protein PROVALCAL_01886 [Providencia alcalifaciens DSM
30120]
Length = 550
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 123/521 (23%), Positives = 212/521 (40%), Gaps = 38/521 (7%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEA 53
+D+ + + LKN+R +EL + P + ++ D +++
Sbjct: 3 LKQDLLKQLSQLKNERQSFEPHWKELAEYTRPRSTRFSTSEVNRGDRRNTKIIDQEAAKS 62
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
LSS + S IT P +KW LA + V+ W + V +
Sbjct: 63 ERTLSSGMMSGITSPARKWFRLATPDPDMMNYSP--------VKMWLEVVEQRMNEV--F 112
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+RS L Y+ + F T + D E IR + P+ + Y++ VD
Sbjct: 113 NRSNIYQSLPQTYSDIGTFATSALAVLEDN-----ERVIRTVPFPIGSYYIANGPDLTVD 167
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN-ERFTIIHAVYPKSLT-DKKKDKGN 231
+ +REF+ TV Q+V ++G +S ++KS + T+IH+VYP K D N
Sbjct: 168 TCFREFSMTVRQLVMEFGLDNVSEQVKSMWDSGNYSQWITVIHSVYPNLNRISGKLDAKN 227
Query: 232 KGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNET 288
K F S + D +R E FP + R+ V +++YG S P M AL +++ L
Sbjct: 228 KLFKSVYFEIGGDSDRVLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGSVKALQLL 287
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQF-GNPLPYH 347
AQ +PP A + K + L PG + ++ + + Q +
Sbjct: 288 QRRKAQQIDKVTNPPMQAPASIKNQRISLVPGGITYLPMAGADQMIKPIFQVQADINGLI 347
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEFIGA 405
++ + I+ + DLF +L + +RS +E EK +GP++ L SE +
Sbjct: 348 ADIGDTRNQIKEAYFSDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLQRLDSELLDK 407
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
+I+R I+ + LP LKVEY S + + Q++ V S + V V L
Sbjct: 408 LINRTFAIMARKNLLPVPPEEMQGMQ--LKVEYISVMAQAQKSVGVNSVERFVGFVGGLA 465
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDI 506
P +D ++TD + + ++ +V I
Sbjct: 466 KL--KPEALDKLNTDEIIDNYAESIGISPTIVSSNDQVAAI 504
>gi|167041083|gb|ABZ05844.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured marine
microorganism HF4000_48F7]
Length = 552
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 114/516 (22%), Positives = 217/516 (42%), Gaps = 36/516 (6%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTTG 50
A + + LK++RG +++ + P + + + R++++T
Sbjct: 1 MSSDAATLVQEYEALKSERGNWENMWQDIAELMIPRRADFTNRYRAPGEQRRDRIYESTA 60
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
A ++ +S L + +T W L +E ++++V+ W + T
Sbjct: 61 VRALVRGASGLHNTLTSSTVPWFALETED--------RELMKNRQVQLWLEDATRRCNSV 112
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
RS F +Y ++ FGTGC Y+ + G + S L + Y++
Sbjct: 113 FNAPRSMFHQSAHEYYLDLLAFGTGCMYVTQEPGM-----GPVFKSYFLGHTYIAEGKTG 167
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKG 230
++DSVYR F T + ++G+K L ++ A + RF ++H V P+S +
Sbjct: 168 MIDSVYRRFDDTARSLYKQFGNK-LPDEIVKAADKEPFRRFELLHIVRPRSNAPGGRTSK 226
Query: 231 NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
K F S +V + + +E PYIV R++ + E+YGR P +EALP +R +NE
Sbjct: 227 QKPFLSVYVHAESRKVVQEGGFDEMPYIVSRWQKNSMEVYGRGPGIEALPDVRMVNEMER 286
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE- 349
+ + PP + + PG +N + P+Q G + +E
Sbjct: 287 VGLIALQKVVDPPLLVPDDGFLSPIRTTPGGLNYYRAGLGPQDRIAPLQTGGRVDLNEAK 346
Query: 350 LNRLKESIRSLFLLDLFQVLDDKA------SRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
+ +++ +I F LDL ++ A SA E + R++ +GP++ ++EF+
Sbjct: 347 IGQVRAAIERTFYLDLLELPGPTAADGDVLRFSATEIAARQRDRLNILGPIVARQEAEFL 406
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVE 463
G ++ R L ++ LP + KV Y++P+ Q+A +AS Q + +V
Sbjct: 407 GPLVIRTLSVMLRAEMLPPPPQVLL--DADFKVSYSNPVAIAQRAGELASISQLIQFLVP 464
Query: 464 LGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRD 499
DP+ + T RV+ + + +
Sbjct: 465 FAQL--DPTVIQRFQTGRVAELAAEILKVSPSVFKS 498
>gi|268589375|ref|ZP_06123596.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
gi|291315402|gb|EFE55855.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
Length = 550
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 122/521 (23%), Positives = 213/521 (40%), Gaps = 38/521 (7%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEA 53
+D+ + + LKN+R +EL + P + ++ D +++
Sbjct: 3 LKQDLLKQLSQLKNERQSFEPHWKELAEYTRPRSTRFNTSEVNRGDRRNTKIIDQEAAKS 62
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
LSS + S IT P +KW LA + V+ W + V +
Sbjct: 63 ERTLSSGMMSGITSPARKWFRLATPDPDMMNYSP--------VKMWLEVVEQRMNEV--F 112
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+RS L Y+ + F T + D E IR + P+ + Y++ VD
Sbjct: 113 NRSNIYQSLPQTYSDIGTFATSALAVLEDN-----ERVIRTVPFPIGSYYIANGPDLTVD 167
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN-ERFTIIHAVYPKSLT-DKKKDKGN 231
+ +REF+ TV Q+V ++G +S ++KS + T+IH+VYP K D N
Sbjct: 168 TCFREFSMTVRQLVMEFGLDKVSEQVKSLWDSGNYSQWITVIHSVYPNLNRISGKLDAKN 227
Query: 232 KGFHSKFVSVDEN--RFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNET 288
K F S + + + R E FP + R+ V +++YG S P M AL +++ L
Sbjct: 228 KLFKSVYFEMGGDSERVLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGSVKALQLL 287
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQF-GNPLPYH 347
AQ +PP A + K + L PG + ++ + + Q +
Sbjct: 288 QRRKAQQIDKVTNPPMQAPASIKNQRISLVPGGITYLPMAGADQMIKPIFQVQADINGLI 347
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEFIGA 405
++ + I+ + DLF +L + +RS +E EK +GP++ L SE +
Sbjct: 348 ADIGDTRNQIKEAYFSDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLQRLDSELLDK 407
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
+I+R I+ + LP LKVEY S + + Q++ V+S + V V L
Sbjct: 408 LINRTFAIMARKNLLPVPPEEMQGMQ--LKVEYISVMAQAQKSVGVSSIERFVGFVGGLA 465
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDI 506
P +D ++TD + + ++ +V I
Sbjct: 466 QM--KPEALDKLNTDEMIDNYAESIGVSPTIVSSNDQVAAI 504
>gi|323699782|ref|ZP_08111694.1| phage head-tail connector protein [Desulfovibrio sp. ND132]
gi|323459714|gb|EGB15579.1| phage head-tail connector protein [Desulfovibrio desulfuricans
ND132]
Length = 579
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 133/569 (23%), Positives = 223/569 (39%), Gaps = 41/569 (7%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQLRMWDT 48
A+ + RF+ L+ R +ELT ++ P KN+ R++D+
Sbjct: 4 TELARSLLKRFSGLEEARRPWVSSWQELTEYMLPRKNSFAGPGGHTLGRGRAGDERIFDS 63
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
T A L+S L L+T P W ++ + + +VR + + + +
Sbjct: 64 TPLHALELLASSLGGLLTNPSLPWFDISV--------KDRAKGDADEVRAFMQEARERMV 115
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
+GF + Y V GT Y+EAD +R+ + PL V+++ +
Sbjct: 116 AVFNSEDTGFQAHVHELYLDVALLGTAVMYVEADP-----TSVVRFSARPLGEVFVAESA 170
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KK 227
+ VD+VYR + T Q + +WG S + + E ++HAV+P+ D
Sbjct: 171 RGQVDTVYRRYEVTARQAIQEWG-AACSDETRRKGEDRPEEPVEVLHAVFPRMDRDPAGF 229
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
+ F S ++ V + EE PY+V R+ A E YGR P AL +R LN
Sbjct: 230 GSAHFPFASVYMEVKNSHVLEESGYLEMPYMVPRWAKAAGETYGRGPGQTALSDVRVLNA 289
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH 347
PP + + PG ++ R PV
Sbjct: 290 MARTALMAAEKMSDPPLMVPDDGFLGPVRSGPGGLSYYRAGSTDRIEALPVNVDLRA-AE 348
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
E +N +ESI +FL D + + +A E++ + EK +GP++G LQ+EF+ +I
Sbjct: 349 EMMNGRRESIGRIFLSDQLAP--EGPAVTATEAVIRQAEKMRVLGPVLGRLQTEFLSPLI 406
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R ++ G LP +P L+V YTS + + Q+ Q + + L
Sbjct: 407 RRVFRVMLRGGALPPFPEGLSPDD--LEVRYTSSVTRAQKQYEAQGLAQVMEYLSPLVGG 464
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
MD+ DTDRV+R N P+ ++ V + R Q++ QQ
Sbjct: 465 RDAFGIMDNFDTDRVARHVAELFNIPSDYLKSEDRVVEGRTQKQRV-------ASSQQTA 517
Query: 528 QTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
T + A A + + +G
Sbjct: 518 STVANAAAIAKTLSEAYTDRPSALTELWG 546
>gi|212703348|ref|ZP_03311476.1| hypothetical protein DESPIG_01391 [Desulfovibrio piger ATCC 29098]
gi|212673194|gb|EEB33677.1| hypothetical protein DESPIG_01391 [Desulfovibrio piger ATCC 29098]
Length = 611
Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats.
Identities = 117/544 (21%), Positives = 217/544 (39%), Gaps = 37/544 (6%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRM----------WDTTGSEACIKLS 58
+ R+ L +R + E L P + + D TG A L+
Sbjct: 41 LARRYRALLERRSPWDTAWESLAEHFLPTRFRTDDSLDDRPLLNRSLVDATGILAMRTLA 100
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ L +T P + W LA + +RS + + D+V + R F
Sbjct: 101 AGLQGGMTSPARPWFRLALDD--------PDLSRSHAGQRYLDEVEARMRVV--LQRCNF 150
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE 178
+ + Y + FGT + AD L G R++ + + + VD+V+
Sbjct: 151 YNAMHTIYAELGTFGTAFVFELAD-----LRHGFRFVPLCAGQYVLDTDAARRVDTVFHR 205
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-DKGNKGFHSK 237
++ Q+V +G + L ++ A R ++R +IHAV P++ + + + S
Sbjct: 206 MHMSLRQMVQSFGPEALPENLRLAARRTPDQRHAVIHAVLPRTERRPRLAGPCHMPWASV 265
Query: 238 FVSVDEN---RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQ 294
+ +E FP R+ V A+++YGRSPAM+ALP R L + +
Sbjct: 266 YWLEGREGQVVPLKESGFMGFPGFGPRWDVAANDVYGRSPAMDALPDCRMLQQMGITTLK 325
Query: 295 FGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGAL-SREGRSLFQPVQFGNPLPYHE--ELN 351
++ PP + + DL PG +N + + + P+ P +
Sbjct: 326 AIHKAVDPPMSVHAGLRSVGLDLTPGGINFVDSLPGQNQPVATPLLQVKPDLAQARSAME 385
Query: 352 RLKESIRSLFLLDLFQ-VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
+++ IR+ DLF+ +L+ ++ +A+E + EK +GP++ L E + +I R
Sbjct: 386 AVQQQIRAGLYNDLFRLILEGRSKVTASEIAAREEEKLLLIGPVLERLHDELLIPLIDRT 445
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
++ + LP C + LKVE+ S L + Q+ +++ Q + L +
Sbjct: 446 FRLMLALDMLPPCPPELSG--RHLKVEFVSLLAQAQKLVGISATDQYLAL--TLKAASAW 501
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTS 530
P +D +D D + + P L R E +R RE R+ ++ L Q+
Sbjct: 502 PEALDSVDVDNLLDNYAESLGLPVNLTRPREERARLRAGREEARQTEQQLALLQKAADLG 561
Query: 531 QDIG 534
+
Sbjct: 562 HTLA 565
>gi|262043408|ref|ZP_06016533.1| hypothetical protein HMPREF0484_3551 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039234|gb|EEW40380.1| hypothetical protein HMPREF0484_3551 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 515
Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats.
Identities = 116/520 (22%), Positives = 193/520 (37%), Gaps = 42/520 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------------NAQLRMWD 47
A + R + LK R E + YP + + R+ D
Sbjct: 1 MDELAVKLVKRADTLKANRQVHESVWRECYDYTYPLRGAGLSDEVLDAQSAKSKVARLLD 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
T +++ L+S L S +TP +W L W +
Sbjct: 61 GTATDSARMLASALMSGMTPANAQWLNLDSESLP------------DDAAAWLSTCATLV 108
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM-SV 166
+ + F VV G Y++ D +E G + PL+ Y+ S
Sbjct: 109 --WENIHAANFDAEGYEANLDVVCAGWFALYIDEDREE----GGFSFQQWPLAQCYVTST 162
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK-SLTDK 225
+VD++YR + T +Q + ++G +S K+ A A+ +++F +H ++P+ +
Sbjct: 163 RRDGIVDTIYRRYQLTAEQAIKEFGADKVSKKISDAAAKKPDDKFEFLHCIFPRENYVVN 222
Query: 226 KKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
+ N F S V V E FP V R+ YG P +ALP + L
Sbjct: 223 ARLAKNLRFASYNVEVSGKLIVRESGYHEFPCCVPRWMKIPGTPYGIGPVYDALPDCKEL 282
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPL 344
NET L++ IA + +K G I + +P+ G +
Sbjct: 283 NETKRMEKAAQDLAIAGMWIAEDDGVLNPRTVKVGPRRIIVANS--VDSMKPLLTGADFN 340
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
RL+ SIR + + D Q D + +A E + +GP+ G Q+E++
Sbjct: 341 VAFTAEERLQASIRKIMMADQLQ-PQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQ 399
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ R + G P + + V Y SPL + QQ E+V + + V L
Sbjct: 400 PLVERCFGLAFRAGVFPPAPESLQ--NANFNVRYISPLARAQQLENVTAIERLGANVANL 457
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ P D +DTD +R A PA +IR + VE
Sbjct: 458 AQVS--PDVTDLVDTDEATRVIADALGVPAKVIRSSDAVE 495
>gi|85059164|ref|YP_454866.1| hypothetical protein SG1186 [Sodalis glossinidius str. 'morsitans']
gi|84779684|dbj|BAE74461.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 541
Score = 366 bits (938), Expect = 7e-99, Method: Composition-based stats.
Identities = 115/523 (21%), Positives = 198/523 (37%), Gaps = 42/523 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------------NAQLRMWD 47
A + R + LK+ R E + YP + + ++ D
Sbjct: 1 MDELAVKLITRADTLKSHRQRHESVWRECYDYTYPLRGAGFSADVLDAQSAKSKVAKLLD 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
T +++ L+S L S +TP +W L + W +
Sbjct: 61 GTATDSARMLASALMSGMTPANAQWLNLDSESLP------------DDAKAWLSGCATLV 108
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS-V 166
+ + F VV G Y+ DE E G + PLS Y++
Sbjct: 109 --WENIHAANFDAEGYEANLDVVCAGWFVLYI----DENREEGGYMFQQWPLSQCYVAST 162
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK-SLTDK 225
+VD++YR + T +Q ++++G+ +S K++ A +++F +HA++P+ +
Sbjct: 163 RKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAAKDKPDDKFDFLHAIFPRKNYVVN 222
Query: 226 KKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
+ + F S V R E FP V R+ + YG P +ALP + L
Sbjct: 223 ARLAKHLRFASFHVERQGKRIVRESGYHEFPVCVPRWMKISGGAYGIGPVYDALPDCKEL 282
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
NET L++ IA + + +K G I + +P+ G
Sbjct: 283 NETKRMEKAAQDLAISGMWIAEDDGVINPYSVKVGPRRII--VASSVNSMKPLLTGADFH 340
Query: 346 YHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
L+ SIR + + D Q D + +A E + +GP+ G Q+E++
Sbjct: 341 VAFTAEDRLQASIRKIMMADQLQ-PQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQ 399
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ R I G P + + V Y SPL + Q+ E V + + V +L
Sbjct: 400 PLVERCFGIAFRAGVFPAPPDSMQ--TAHFNVRYISPLARAQKLEDVTAIERLGANVAQL 457
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+ P +D +DTD R A PA +IR A+V +R
Sbjct: 458 SQVS--PEVVDLVDTDEAMRVVADALGVPAKVIRSAADVTSLR 498
>gi|218886173|ref|YP_002435494.1| hypothetical protein DvMF_1072 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757127|gb|ACL08026.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 595
Score = 366 bits (938), Expect = 7e-99, Method: Composition-based stats.
Identities = 125/548 (22%), Positives = 218/548 (39%), Gaps = 59/548 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-------------------- 40
M + +D ++ ++L+ QR ++ ++ P +
Sbjct: 1 MTSQRLRDAREAVDFLERQRSPWEEAWRDIAAYVLPRRGRMHGRDPLGASAPGAVGGSSG 60
Query: 41 ----------AQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKED 90
R+ D T + A L++ + +T P + W L + A D
Sbjct: 61 VSGTHRSTDMRGGRVIDATATRAVRILAAGMQGGLTSPARPWFRLRLADGA--------D 112
Query: 91 ARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEE 150
A S R W D V L+ +RS F + YT + FG+ Y E D E
Sbjct: 113 AESGPARRWLDAVEQRLY--WALARSNFYQASHALYTELAAFGSADLYQEVDP-----ER 165
Query: 151 GIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENER 210
R+ ++ + + VD+V R T Q+ ++G+ LS+ + L + N
Sbjct: 166 LTRFAALTCGEFSWACDAAGRVDTVARRMLMTARQLAERYGEAHLSTGTRRMLRKEPNRH 225
Query: 211 FTIIHAVYPKSLTDKKKDKG-NKGFHSKFVSVDE--NRFFEEKQIATFPYIVGRYRVRAD 267
++H V P+++ G + F S D E FP++ R+ V
Sbjct: 226 VEVVHLVRPRAVRTPGHGSGLHMPFESLVFEADGAAGDLLHEGGFEEFPHLAARWDVTGS 285
Query: 268 EIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGAL 327
++YGRSP M+ LP ++ L E ++PP + ++ +L PG N A
Sbjct: 286 DVYGRSPGMDVLPDVKMLQEMARSQLLAIHKVVNPPMRVPT-GFKQRLNLIPGAQNYVAP 344
Query: 328 SREGRSLFQPVQFGNPLPYHEE--LNRLKESIRSLFLLDLFQV--LDDKASRSAAESMEK 383
+ P+ NP ++ +++++R F DLF + D +++ +AAE E+
Sbjct: 345 GQ--PEAVAPLYQINPDIAAVTRKIDDVRKAVREGFFNDLFLMFTADGRSNVTAAEVAER 402
Query: 384 TREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLF 443
+EK +GP+I Q+E + +++R IL G LP ++VEY S L
Sbjct: 403 GQEKLLMLGPVIERHQTELLDPLLTRTYGILRRAGALPPNPPELEG--LEMRVEYVSALA 460
Query: 444 KYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
+ Q+ + S Q V L P +D +D D+ PA ++R AEV
Sbjct: 461 QAQRLGAAQSIRQFAAEVTALSATA--PGVLDKIDFDQAVDELASIGGVPARVVRSDAEV 518
Query: 504 EDIRQQRE 511
+R +RE
Sbjct: 519 LRLRAERE 526
>gi|85059667|ref|YP_455369.1| hypothetical protein SG1689 [Sodalis glossinidius str. 'morsitans']
gi|84780187|dbj|BAE74964.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 517
Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats.
Identities = 115/523 (21%), Positives = 199/523 (38%), Gaps = 42/523 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------------NAQLRMWD 47
A + R + LK+ R E + YP + + ++ D
Sbjct: 1 MDELAVKLITRADALKSHRQRHESVWSECYDYTYPLRGAGFSADVLDAQSAKSKVAKLLD 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
T +++ L+S L S +TP +W L A + + W +
Sbjct: 61 GTATDSARMLASALMSGMTPANAQWLNLDCESLA------------DEDKAWLSTCATLV 108
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS-V 166
+ + F VV G Y+ DE E G + PLS Y++
Sbjct: 109 --WENIHAANFDAEGYEENLDVVCAGWFVLYI----DENREEGGYTFQQWPLSQCYVAST 162
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
+VD++YR + T +Q ++++G+ +S K++ A +++F +HA++P++
Sbjct: 163 RKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAARDKPDDKFDFLHAIFPRTNYGVN 222
Query: 227 KD-KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
+ F S V R E FP V R+ YG P +ALP + L
Sbjct: 223 ACLAKHLRFASFHVERQGKRIVRESGYHEFPVCVPRWMKIPGGAYGIGPVYDALPDCKEL 282
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
NET L++ I+ + + +K G I + +P+ G
Sbjct: 283 NETKRMEKAAQDLAISGMWISEDDGVINPYSVKVGPRRII--VASSVNSMKPLLTGADFQ 340
Query: 346 YHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
L+ SIR + + D Q D + +A E + +GP+ G Q+E++
Sbjct: 341 VAFTAEDRLQASIRKIMMADQLQ-PQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQ 399
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ R I G P + + V Y SPL + Q+ E V + + V +L
Sbjct: 400 PLVERCFGIAFRAGVFPPPPDSMQ--TAHFNVLYISPLARAQKLEDVTAVERLGANVAQL 457
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+ P +D +DTD +R A PA +IR A+V +R
Sbjct: 458 SQVS--PEVVDLVDTDEATRVVADALGVPAKVIRSAADVTSLR 498
>gi|288959388|ref|YP_003449729.1| phage head-tail connector protein [Azospirillum sp. B510]
gi|288911696|dbj|BAI73185.1| phage head-tail connector protein [Azospirillum sp. B510]
Length = 535
Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats.
Identities = 135/552 (24%), Positives = 220/552 (39%), Gaps = 30/552 (5%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M A++I R L R EL ++ P + R++D T
Sbjct: 1 MADARAEEIIRRRESLAALRSPWEGVWSELGEYVRPLRTGFAGGPPQSGAKPSSRLFDAT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
A L++ L +IT P W + E + V+ W V +
Sbjct: 61 AGMANNNLAAGLYGMITNPANSWFNI--------KHEIDELNEVQAVKLWMATVERAMRQ 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ F + Y + FGT FY++ G+ Y LS ++S N +
Sbjct: 113 ALAANGLAFYSRVFGLYLDLPAFGTAVFYIDEQPG-----RGLWYSHRRLSECFVSENDR 167
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-D 228
+D+VYR+FT+T Q +WGD+ K+ + F +HAV P D +K
Sbjct: 168 EEIDTVYRDFTWTARQAQQRWGDRAGREVAKAIEKGEPDRPFRWLHAVEPNPDFDPRKLG 227
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
K F S +V VD+ E PY V R+ YG S A+ A+ I+ +N
Sbjct: 228 ARFKPFRSVYVGVDDRHVVAEGGYDELPYQVPRWAPSDAGTYGDSAAVLAIADIKMVNAM 287
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ ++ PP +A E R PG + G + G L +P+Q G +
Sbjct: 288 GKTTIVGAQKAVDPPLLAPDEFSVRGLRTSPGGITYGGVDMGGNQLLKPLQTGARVDLGL 347
Query: 349 EL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
EL + + +IR F L ++ R+A E ME EK + P +G +Q+EF+ +
Sbjct: 348 ELEEQRRGAIREAFHWSLLLMVQQ-PGRTATEVMEHQEEKLRLMAPHLGRIQAEFLDPAL 406
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R +L+ G LP L+++Y SPL + +A A+ ++ + + +
Sbjct: 407 GRVFSLLNRTGQLPPPPDVLRQYPG-LRLDYVSPLARAAKAAEGAAVIRTLEALGPIAQL 465
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
P MD+ DTD ++R A PA ++ D +VE +R R Q++
Sbjct: 466 R--PEVMDNFDTDEIARGISDAYGLPAKMMLDPRQVEQMRSARAQQQQQAVALEQSAVAA 523
Query: 528 QTSQDIGAKAAG 539
+D+ A A
Sbjct: 524 GALKDMSAAGAA 535
>gi|295096867|emb|CBK85957.1| Bacteriophage head to tail connecting protein [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 541
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 113/523 (21%), Positives = 195/523 (37%), Gaps = 42/523 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------------NAQLRMWD 47
A + R + LK R + E + YP + + ++ D
Sbjct: 1 MDELAVKLIKRSDTLKANRQQHESVWRECYDYTYPLRGAGFSDEVLDAQSAKHKVAKLLD 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
T +++ L+S L S +TP +W L + W + +
Sbjct: 61 GTATDSARMLASALMSGMTPANAQWLNLDSESLP------------DDAKAWLSECATLV 108
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM-SV 166
+ + F VV G Y++ D +E G + PL+ Y+ S
Sbjct: 109 --WENIHAANFDAEGYEANLDVVCAGWFVLYIDEDREE----GGYTFQQWPLAQCYVTST 162
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
+VD++YR + T +Q + ++G +S K++ A + +++F +H ++P+
Sbjct: 163 RKDGIVDTIYRRYQLTAEQAIKEFGADKVSEKIRDAAKKKADDKFDFLHCIFPRETYMVD 222
Query: 227 -KDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
+ N F S V V + E FP V R+ YG P +ALP + L
Sbjct: 223 ARLAKNMRFASYNVDVSNKQIVRESGYHEFPCCVPRWMKIPGGSYGIGPVYDALPDCKEL 282
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPL 344
NET L++ IA + +K G I + +P+ G +
Sbjct: 283 NETKRMEKAAQDLAISGMWIAEDDGVLNPRTVKVGPRRIIVANS--VDSMKPLLTGSDFS 340
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
RL+ SIR + + D Q D + +A E + +GP+ G Q+E++
Sbjct: 341 VAFTAEERLQASIRKIMMADQLQ-PQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQ 399
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ R I G + + V Y SPL + Q+ E V + + V L
Sbjct: 400 LLVVRCFGIAFRAGIFSPPPESLQ--NANFNVRYISPLARAQKLEDVTAIERLGANVANL 457
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+D +DTD +R A PA +IR + V D+R
Sbjct: 458 AG--ISQDVVDLIDTDEATRVVADALGVPAKVIRSSDAVADLR 498
>gi|332160969|ref|YP_004297546.1| hypothetical protein YE105_C1347 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665199|gb|ADZ41843.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862125|emb|CBX72289.1| hypothetical protein YEW_AK02260 [Yersinia enterocolitica W22703]
Length = 534
Score = 359 bits (922), Expect = 6e-97, Method: Composition-based stats.
Identities = 116/523 (22%), Positives = 201/523 (38%), Gaps = 42/523 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQL--------------RMWD 47
+A + R + LK R E + YP + + R+ D
Sbjct: 1 MDDTAARLVKRVSSLKAARQLHESVWRECYDYTYPLRGSGFSTEVLDAQSAKSKVARLLD 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
T +++ L+S L S +TP +W L + S R W
Sbjct: 61 GTATDSARILASALMSGMTPANAQWLDL------------GSENLSDDERSWLSTCATL- 107
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
+ + F VV G Y++ D + G + PL+ V+++ +
Sbjct: 108 -TWENIHAANFDAEGYEANIDVVCAGWFALYVDED----TEQGGYTFNQWPLAQVFVASS 162
Query: 168 H-QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
VV++VYR + T +Q V ++G +S K++ A + +++F IHA++P+
Sbjct: 163 RRDGVVNTVYRCYQLTAEQAVKEFGRDNVSHKIQDAANKKPDDKFEFIHAIFPRDGYIGN 222
Query: 227 -KDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
+ N F S V V E + E FP V R+ YG P +ALP + L
Sbjct: 223 ARLAKNLPFASFNVEVAEKKVVRESGYHEFPVCVPRWMKIPGTPYGVGPVYDALPDCKEL 282
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPL 344
NET L++ IA + + G I + + +P+ G +
Sbjct: 283 NETKRMEKAAQDLAIAGMWIAEDDGVLNPRTVNVGPRKIIVANS--VNSMKPLLTGADFN 340
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
RL+ IR + + D Q D + +A E + +GP+ G Q+E++
Sbjct: 341 VAFTAEERLQAQIRKILMADQLQ-PQDGPAMTATEVHVRVALIRQLLGPVYGRFQAEYLQ 399
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ R I G P+ + + Y SPL + Q+ E V + + + +L
Sbjct: 400 PLVERCFGIAFRAGVFPQMPESMAQAN--FNIRYISPLARAQKLEDVTAIERLGANIAQL 457
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+P +D+MD D +R A PA ++R A+V +R
Sbjct: 458 A--AINPEVIDNMDADAAARVVSDALGVPAKVLRSAADVTALR 498
>gi|83313332|ref|YP_423596.1| hypothetical protein amb4233 [Magnetospirillum magneticum AMB-1]
gi|82948173|dbj|BAE53037.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 545
Score = 357 bits (915), Expect = 4e-96, Method: Composition-based stats.
Identities = 107/504 (21%), Positives = 193/504 (38%), Gaps = 43/504 (8%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMWDTTGSEACIK 56
+ R+ K +R +E + P ++ R++D T + +
Sbjct: 31 SFLLRRYRKAKERRSTWESHWQECYDYALPLRDGMFHSSVPGERKADRLFDGTAPDCVDQ 90
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L++ L S +TPP +W GLA + A + +++ + RS
Sbjct: 91 LAASLLSELTPPWAQWFGLAAGDQMPE-------ADRDQAAPLLERIAAVMQSH--FDRS 141
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
F + Y V GT E G R+ SVPL V + +D +
Sbjct: 142 NFAIEMHQCYLDAVTGGTASLMFEEAP--PGEPSAFRFTSVPLGQVVLEEGPAGRLDVTF 199
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHS 236
R +V + +++ VL ++ A A + + R ++ AV P +G + +
Sbjct: 200 RRSELSVAALKARFPRAVLPREVIKAAADDPDLRLGVVEAVVP--------VRGGYSYAA 251
Query: 237 KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
+ Q ++ P++ R+ E+YGRSP M+ALP I+ N+ V + +
Sbjct: 252 VLDDDGSDLVLGRGQFSSSPFLNFRWLKAPGEVYGRSPVMKALPDIKTANKVVELVLKNA 311
Query: 297 RLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLK 354
+++ A + L PG + A+ G G L+ L+
Sbjct: 312 TIAVTGIWQADDDGVLNPANIKLVPGTIIPKAVGSAGLQPLTA--PGRFDTSQLVLDDLR 369
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
IR + D + +A E +++ + +G G LQSE + +I R + IL
Sbjct: 370 GRIRHALMGDKLSQPA-SPALTATEVLQRADDMARLLGATYGRLQSELLTPLILRAIHIL 428
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
+G +P + ++Y SPL + Q + L + + LG PS +
Sbjct: 429 RRRGEIPP----LQVDGRTIDLQYRSPLAQNQGRRDARNVLNWLGALSSLG-----PSAL 479
Query: 475 DHMDTDRVSRFSLWATNTPAVLIR 498
+D+D +R+ A N P+ LIR
Sbjct: 480 ATVDSDAAARWLARAFNVPSELIR 503
>gi|298485985|ref|ZP_07004059.1| hypothetical protein PSA3335_1414 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298159462|gb|EFI00509.1| hypothetical protein PSA3335_1414 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 533
Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats.
Identities = 135/523 (25%), Positives = 210/523 (40%), Gaps = 42/523 (8%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQLRMWDTTG 50
+A I + LK+ R + YP + + + RM D T
Sbjct: 3 TAAQICKTLSTLKSLRSPHESVWRDCFDHSYPIRGSGFCIEQITAMEAQMRKARMIDGTT 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
++A LSS + S +TP W G+ S + R W D D L +
Sbjct: 63 TDAARILSSGIMSGLTPANSLWFGMDVG------------QESDEERRWLDGSADIL--W 108
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN-HQ 169
+ S F T VV G Y++ D + G + P+++VY S +
Sbjct: 109 QNIHASNFDAAAFEGLTDVVCAGWFALYIDQD----MEKGGFTFDLWPIASVYCSASKAG 164
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD-KKKD 228
+D+VYR + T +Q V+++G+ LS + E IHA+YP++ +
Sbjct: 165 GKIDTVYRTYKLTAEQAVNEFGEDNLSETTRKLAKEKPQELVEFIHAIYPRTTHMVGARL 224
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
N S V V E P +V R+ + D +Y P +ALP R LNE
Sbjct: 225 AKNMPVASCKVEVAAKTLVSESGYHEMPVVVPRWMMIPDSVYAVGPVFDALPDSRTLNEL 284
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
G L++ IA + +K G I + +P+Q G+ Y E
Sbjct: 285 CRMDLAAGDLAIAGMWIAEDDGVLNPRTVKVGPRKIIVANS--VDSMKPLQSGSNFQYAE 342
Query: 349 E-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ RL+ SIR + + D Q D + +A E + +GP+ G LQ+E++ MI
Sbjct: 343 TKIARLQGSIRKILMADQLQA-QDGPAMTATEVHVRVNLIRQLLGPVYGRLQTEYLQPMI 401
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R I G L + + V Y SPL + Q+ E V++ Q V L V
Sbjct: 402 ERCFGIAYRAGVLGQAPESLAG--RDFTVRYLSPLARSQKLEEVSAIDQFVQ--GALIVA 457
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
DPS MD++D D RF A P+ +IR A+ + +R+ R
Sbjct: 458 QADPSVMDNIDMDEAQRFKGEALGVPSSVIRSKADRDKLREDR 500
>gi|220903991|ref|YP_002479303.1| hypothetical protein Ddes_0717 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868290|gb|ACL48625.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 597
Score = 352 bits (904), Expect = 7e-95, Method: Composition-based stats.
Identities = 119/547 (21%), Positives = 208/547 (38%), Gaps = 40/547 (7%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR-------------MWDTTGSEACI 55
+ R+ L +R + + L P + + + + D TG A
Sbjct: 8 LARRYQALLRRRMPWDTAWQSLADHFLPTRCRLRPQGGGAEEGPMLNSGLVDATGILAMR 67
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
L++ L +T P + W L + + ARS+ + W D+V + R
Sbjct: 68 TLAAGLQGGLTSPARPWFRLGLDDA--------DLARSRPGQAWLDEVAARMRSV--FHR 117
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
F + + Y + FGT + AD +G R++ + + + VD+V
Sbjct: 118 CNFYNAMHTLYAELATFGTAFVFELADP-----RDGFRFMPLCAGEYVLDCDAGRRVDTV 172
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT-DKKKDKGNKGF 234
+R + ++ QIV +G L ++ A+ RN +ER +I AVYP+ +
Sbjct: 173 FRRSSMSLRQIVQTFGPAALPESLREAVRRNADERRNVIQAVYPRDDRIHGILTASHMPV 232
Query: 235 HSKFVSVD---ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
S + E FP R+ V +++YGRSPAM+ALP R L +
Sbjct: 233 ASVYWLEGRDGGEHALRESGFRHFPGFGPRWDVAGNDVYGRSPAMDALPDCRMLQQMGIT 292
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE--- 348
+ ++ PP + + DL PG +N +
Sbjct: 293 TLKAIHKAVDPPMSVSAGLRSVGLDLTPGGINYVDSAPGQSPQAATPLLQVNPDLSTARR 352
Query: 349 ELNRLKESIRSLFLLDLFQ-VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ ++ IRS DLF+ +L+ ++ +A+E + EK +GP++ L E ++
Sbjct: 353 AMESVQNQIRSGLYNDLFKLILEGRSGVTASEIAAREEEKLVLIGPVLERLHDELFIPLM 412
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R + + LP C + LKVE+ S L + Q+ V++A Q + L
Sbjct: 413 DRTFECMRELDMLPPCPPELSG--RRLKVEFVSLLAQAQKLVGVSAADQYLAL--TLRAS 468
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
T P +D ++ D + + P L R E E +R R R +Q
Sbjct: 469 TAWPEALDTLNVDHLLDNYADSLGLPISLTRPPEEREQMRAARAEAARGAALADSLKQGV 528
Query: 528 QTSQDIG 534
Q +
Sbjct: 529 DLVQQLA 535
>gi|303257564|ref|ZP_07343576.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
gi|302859534|gb|EFL82613.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
Length = 548
Score = 352 bits (903), Expect = 8e-95, Method: Composition-based stats.
Identities = 114/564 (20%), Positives = 228/564 (40%), Gaps = 39/564 (6%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYP-----------YKNNAQLRMWDTTGSEACI 55
K I RF LK +R ++ + P + ++ D +
Sbjct: 6 KLINQRFESLKQERSSWEDLWRDIRDYCLPDLGCFPGEDATQGSKRYRKILDAEAIDCAD 65
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
L++ L ++ P + W L + + ++ V+EW +V D L S+
Sbjct: 66 VLAAGLLGGVSSPSRPWLRLTT--------MDPDLDKNPAVKEWMTKVQDLL--LLYFSK 115
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
+ L Y + FGT C ++ E+ I ++ + +++ + VD++
Sbjct: 116 AECYNALHQSYLELPVFGTACTIVKPHP-----EQLISLQNLTIGEYWLAEDDYGKVDTM 170
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGNKGF 234
YR + T Q+V +WG + +++ ++ A ++ RF +IHA+ P+ + K+D N +
Sbjct: 171 YRRLSLTAKQMVQQWGFEAVNNDVRQAFEKDPFTRFNVIHAIEPRIERNPDKRDNKNMPW 230
Query: 235 HSKFVSVDE-NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
S + ++ E FP + R+ +YGR P +AL + L LA
Sbjct: 231 QSVYFQEGVQDKVLSESGFRNFPALCPRWMTSGGSVYGRGPGAKALSAQKSLQRLHLRLA 290
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN--PLPYHEELN 351
+ PP + S K + KPG A++ + + + + P +
Sbjct: 291 ELVDYGTRPPILYPSTLKDQLSQFKPGGR--VAVNPQEAPIIRSMWEVRTDPQAMLALIQ 348
Query: 352 RLKESIRSLFLLDLFQVL---DDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
++ I+ +F +++FQ++ ++ R+A E +EK +GP++ L +E + +++
Sbjct: 349 STRQDIQRIFFVNVFQMIAATANQTDRTATEVQALEQEKVMMLGPVLERLHTELLDPLVT 408
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
+ LPE L +EY S L + Q+ S ++ + L
Sbjct: 409 NAFGFMVEYNMLPEVPEELYG--RELSIEYVSVLAEAQKNASANGIVRTAQQIGLLA--Q 464
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
+P +D +D D P LI +V IRQQR Q++ + QQ
Sbjct: 465 INPQAVDKLDVDATIDQLADMNGVPPSLIVTGQKVALIRQQRAEQQQAQMQAAQLQQAMT 524
Query: 529 TSQDIGAKAAGRAMEKKLTHDMME 552
+ +D+G A + +++ + + +
Sbjct: 525 SLKDLGQAADSQGLQEAFSEEGAQ 548
>gi|23015763|ref|ZP_00055531.1| hypothetical protein Magn03010200 [Magnetospirillum magnetotacticum
MS-1]
Length = 543
Score = 351 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 107/518 (20%), Positives = 196/518 (37%), Gaps = 43/518 (8%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMWDTTGSEACIKLS 58
+ R+ K +R +E + P ++ R++D T + +L+
Sbjct: 33 LLRRYRKAKERRSTWESHWQECYDYALPLRDGMFHAGVPGERKADRLFDGTAPDCVDQLA 92
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ L S +TPP +W GL + A +V ++V + RS F
Sbjct: 93 ASLLSELTPPWAQWFGLTAGDQMPE-------AERDQVAPLLERVAAVMQSH--FDRSNF 143
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE 178
+ Y V GT E G R+ SVPL V + +D +R
Sbjct: 144 AIEMHQCYLDAVTGGTASLLFEE--AAPGEASAFRFTSVPLGQVVLEEGPAGRLDVTFRR 201
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
+V + +++ VLS + A A + + R ++ AV P +G + +
Sbjct: 202 SEMSVAALKARFARAVLSGHLIKAAADDPDLRLGVVEAVIP--------VRGGYSYAAVL 253
Query: 239 VSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRL 298
+ ++ P++ R+ E+YGRSP M+ALP I+ N+ V + + +
Sbjct: 254 DDESSDVVLGRGSFSSSPFLNFRWLKAPGEVYGRSPVMKALPDIKTANKVVELVLKNATI 313
Query: 299 SLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKES 356
++ A + L PG + A+ G G L+ L+
Sbjct: 314 AVTGIWQADDDGVLNPANIKLVPGTIIPKAVGSAGLQPLTA--PGRFDTSQLVLDDLRGR 371
Query: 357 IRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDS 416
IR + D S +A E ++++ + +G G LQSE + +I R + IL
Sbjct: 372 IRHALMGDKLSQPA-SPSLTATEVLQRSDDMARLLGATYGRLQSELLTPLIMRAIHILRR 430
Query: 417 QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDH 476
+G +P + + ++Y SPL + Q + L + + LG P+ +
Sbjct: 431 RGEIPP----LSVDGRVFDLQYRSPLAQNQGRRDARNVLSWLGALSSLG-----PAALAT 481
Query: 477 MDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQR 514
+D +R+ A N P+ L+R +E + +
Sbjct: 482 VDAAAAARWLGRAFNVPSELVRPASEQQAGAMDPDPAA 519
>gi|254251745|ref|ZP_04945063.1| hypothetical protein BDAG_00942 [Burkholderia dolosa AUO158]
gi|124894354|gb|EAY68234.1| hypothetical protein BDAG_00942 [Burkholderia dolosa AUO158]
Length = 539
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 108/565 (19%), Positives = 211/565 (37%), Gaps = 46/565 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR--------------MW 46
M + + R +K++R E P + + ++
Sbjct: 1 MIDSLGETLAKRLETMKSKRQVHELVWRECFMLTDPVRASGLDGPQMDANQIAQAVALIF 60
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
D+T ++A L + + S +TP W + + + W D ++
Sbjct: 61 DSTATDAKRTLEASIMSGMTPANSLWFTMTVN------------GADDEGERWLDSASEV 108
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSV 166
L ++ + F G Y+ DE G+ + P++ VY +
Sbjct: 109 L--WQNIHSANFDSEAADAVAD-GMAGWFALYI----DENRDAGGLYFEHWPMAGVYCAS 161
Query: 167 N-HQNVVDSVYREFTFTVDQIVSKWGD--KVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ VD V+R + T +Q V ++ L ++ E + A+YP+ +
Sbjct: 162 SKPGGTVDIVFRCYQLTAEQCVREFNRRGDSLPQEIVDKAKNKPEELVDLCQAIYPRDVH 221
Query: 224 D-KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
N S + ++ + E P +V R++ + +YG P ++ALP I
Sbjct: 222 MVGALRAKNMPIASVTFACNQKQVIRESGYHEMPVVVARWKKIPNSVYGVGPLLDALPDI 281
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R LN+ V L++ IA + +K G + + +P+Q +
Sbjct: 282 RTLNDIVKLEYANLDLAVSGMWIAEDDGVLNPRTVKVGPRKVIVANS--VDSMKPLQPAS 339
Query: 343 PLPYHEE-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
E + +L+ IR + D Q D + +A E + +GP+ G LQ+E
Sbjct: 340 NFQLAETRIEKLQGQIRKTLMADQLQ-PQDGPAMTATEVHVRVDLIRQLLGPIYGRLQAE 398
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
++ +I+R + G P + V+Y SPL + Q+ E V++ + + V
Sbjct: 399 YLQPLIARCFGLAYRAGVFPPPPDSLGGRN--FSVQYQSPLARAQKLEEVSAIERLMGDV 456
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
+ P +D++D D R + P ++R + +V RQQ++ ++Q
Sbjct: 457 TVIAQV--KPEALDNIDGDEAVRLTAKNLGVPDSIVRTSDQVTQYRQQKQAAAAQQQQQQ 514
Query: 522 LQQQ-LQQTSQDIGAKAAGRAMEKK 545
L + + IG+ AA R + +
Sbjct: 515 LGMEVQGDVMKSIGSAAASRMVANQ 539
>gi|38424264|gb|AAR19412.1| head-tail connector protein [uncultured cyanophage]
Length = 517
Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats.
Identities = 72/552 (13%), Positives = 160/552 (28%), Gaps = 57/552 (10%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQ----------LRMWDTTGSEACIKLSS 59
+ R++ L ++R + + + PY W + G++ + L+S
Sbjct: 4 KTRYDELSSERTQFLDEARQASELTLPYLIRGHEETYIGMKQLKTPWQSVGAKGVVTLAS 63
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L + PP + L S + ++ +V T+ + S
Sbjct: 64 KLMLALLPPQTSFFKLQLDESQIGEEFGPDIKS--ELDLSFAKVERTILE--NIAASDDR 119
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
+ +V G +M D PL+ + + V + +
Sbjct: 120 VAVHQALQHLVVAGNALIFMGKDG----------LKVFPLNRYVVERDGNGNVLEIVTKE 169
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFV 239
+ + + + + +E H + +H +
Sbjct: 170 RISKKLLAEEMPE--YEEPVNEDSNFRPDECDVYTHVRRENNRV---------VWHQEVH 218
Query: 240 SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLS 299
+ + I P++ R+ E YGR + + ++ L L + +
Sbjct: 219 GKVLPKSISKAPIDANPWLPLRFNTVDGEAYGRGRVGQFIGDLKSLEALSQALVEGSAAA 278
Query: 300 LHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRS 359
+ + + L GA+ +Q G + + R
Sbjct: 279 AKVVFVVAPSSTTKPATLASAG--NGAIVSGRPDDIGVIQVGKTADFGTAFQMTQVYERR 336
Query: 360 LFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGN 419
L L + +A E E +G L L EF+ ++R+L + +
Sbjct: 337 LSEAFLILNPRNAERVTAEEVRMTQLELEQQLGGLFSLLTVEFLVPYLNRKLSVAQKRNE 396
Query: 420 LPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDT 479
+P P V + L + Q A S+A + + G + +++
Sbjct: 397 IPRIPKGIVKPTI---VAGVNALGRGQDAISLA------QFLQTIAQTMGPEAIAQYINP 447
Query: 480 DRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAA 538
V + A L+R E++ +Q + ++ + Q + +T
Sbjct: 448 TEVVKRLAAAQGIDILNLVRSMEELQANQQAEQQMQQQQMQAEQQTAMLKT--------- 498
Query: 539 GRAMEKKLTHDM 550
M+ +
Sbjct: 499 -PMMDPTKNPQL 509
>gi|262043663|ref|ZP_06016772.1| hypothetical protein HMPREF0484_3791 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039001|gb|EEW40163.1| hypothetical protein HMPREF0484_3791 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 554
Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats.
Identities = 139/570 (24%), Positives = 252/570 (44%), Gaps = 40/570 (7%)
Query: 1 MNQRSAKD--------IQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQ 42
M+ + ++ I ++ R +E+ + P
Sbjct: 1 MSDQKTQENESERIGRILREQKSMETDRSVFEQHWQEIAERILPRSAEFKGTRQKGGKRT 60
Query: 43 LRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQ 102
+ D TG+ A K + + S+ITP QKWH L+ + A ++V+ + +
Sbjct: 61 EKAIDATGALALQKFGAAIESVITPRTQKWHTLS----------NERFANDEEVQRYFQE 110
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
V D LF R + F Y S FGTGC +++ + +G RY + L +
Sbjct: 111 VRDILFRLRYAPWANFASQSHEHYISSGAFGTGCTFVD-----NVIGKGPRYCTYHLREI 165
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSL 222
Y + N Q ++D V+R++ T Q + ++G++ L ++++ + +++F +H V P
Sbjct: 166 YFTENFQGMIDVVHRKYCMTARQAIQQFGEENLPQQVRTTARNDPSKQFNFLHRVEPNDK 225
Query: 223 TD-KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPT 281
D ++DK F S + ++ ++ +E + PY + RY E+YGRSPAM LP
Sbjct: 226 RDMSRQDKEGMPFRSVHICMEGSKIVQEGGYWSQPYAISRYYTAPGEVYGRSPAMVVLPD 285
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
I+ LNE + + ++++ PP + + + F + PG +N G ++R+G+ L P+
Sbjct: 286 IKLLNEINRAIIEGAQMAVRPPMLLPEDGILQPFKMMPGALNFGGMNRDGKPLALPLNTA 345
Query: 342 NPLPYHEEL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS 400
L + +++I F + LFQ+L D +A E+M + +EKG + P G +Q+
Sbjct: 346 TDFSVAMTLAEQKRQTINDGFFITLFQILVDNPQMTATEAMLRAQEKGQLLAPTAGRIQA 405
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
EF+G +I RE+DI G LPE +EYTSPL + Q +E + + VN
Sbjct: 406 EFLGTLILREIDIAYQNGLLPEPPEQLKEIGGEYDIEYTSPLVRLQMSEEASGIMNVVNA 465
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+G D + ++ D RF A+ P +++ E+ + Q ++ +
Sbjct: 466 AGTIG--QFDQNIARTLNGDAALRFIAKASGAPLQVVKTEDEMAAQDAADQQQLQLQQLL 523
Query: 521 HLQQQLQQTSQDIGAK---AAGRAMEKKLT 547
++D A A L
Sbjct: 524 AAAPVAATAAKDFAQANQIAQTPAPSPALQ 553
>gi|46581008|ref|YP_011816.1| hypothetical protein DVU2604 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450429|gb|AAS97076.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234693|gb|ADP87547.1| hypothetical protein Deval_2404 [Desulfovibrio vulgaris RCH1]
Length = 569
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 112/521 (21%), Positives = 201/521 (38%), Gaps = 49/521 (9%)
Query: 17 KNQRGELNYWMEELTGFLYPY-------------KNNAQLRMWDTTGSEACIKLSSLLSS 63
+ +R E+ F+ P R+ D T + A L++ +
Sbjct: 16 ERERRVWEPLWREVEDFVLPRCIDSPRRADEAGDTARRGPRIIDGTATRAVRILAAGMQG 75
Query: 64 LITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQ 123
+T P + W L + + + R W D V L+ +RS F +
Sbjct: 76 GLTSPARPWFRLRLADEDMEEAGPE--------RRWLDVVERRLYA--ALARSNFYAAVH 125
Query: 124 SFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTV 183
YT + FG+ Y EAD + +R+ + + + + VD+V R +
Sbjct: 126 GLYTELAAFGSADMYHEADP-----QRVMRFSCLACGDFAWACDAAGRVDTVVRRLRMSA 180
Query: 184 DQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD---------KKKDKGNKGF 234
Q+ ++G+ LS +++ L R+ ++H V P+ + N +
Sbjct: 181 RQMAQRYGEARLSRRVRRMLRRDPERSVPLVHMVRPRVRRNAGEAGKTASGGLGGVNMPW 240
Query: 235 HSKFVSVDE-NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
S + E FP++ R+ V +IYGRSP M+ LP ++ L E
Sbjct: 241 QSLTWETEGAEGLLHEGGFEEFPHLAARWDVAGGDIYGRSPGMDVLPDVKMLQEMARSQL 300
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE--LN 351
++PP ++ +L PG N + P+ NP +
Sbjct: 301 LAIHKVVNPPMRVP-SGFKQRLNLIPGGQNYVTPGQG--ESVGPLYQINPDIGAVTHKME 357
Query: 352 RLKESIRSLFLLDLFQV--LDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
++ ++R F DLF + + +++ +AAE +E+ EK +GP+I QSE + ++ R
Sbjct: 358 DVRRAVREGFFNDLFLMFTAEGRSNITAAEVLERGEEKLLMLGPVIERHQSELLDPLLER 417
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
IL G LP ++VEY S L + Q+ + + + + V L
Sbjct: 418 TYGILRRGGLLPPPPPELAG--RSMRVEYVSALAQAQRVVTAQAIRRFASDVSALAGVA- 474
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
P +D +D ++ PA ++R AEV +R R
Sbjct: 475 -PQVLDKVDFEQAVDELAAIAGVPARVVRSDAEVATLRAAR 514
>gi|120601696|ref|YP_966096.1| hypothetical protein Dvul_0646 [Desulfovibrio vulgaris DP4]
gi|120561925|gb|ABM27669.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
Length = 569
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 112/521 (21%), Positives = 201/521 (38%), Gaps = 49/521 (9%)
Query: 17 KNQRGELNYWMEELTGFLYPY-------------KNNAQLRMWDTTGSEACIKLSSLLSS 63
+ +R E+ F+ P R+ D T + A L++ +
Sbjct: 16 ERERRVWEPLWREVEDFVLPRCIDSPRRADEAGDTARRGPRIIDGTATRAVRILAAGMQG 75
Query: 64 LITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQ 123
+T P + W L + + + R W D V L+ +RS F +
Sbjct: 76 GLTSPARPWFRLRLADEDMEEAGPE--------RRWLDVVERRLYA--ALARSNFYAAVH 125
Query: 124 SFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTV 183
YT + FG+ Y EAD + +R+ + + + + VD+V R +
Sbjct: 126 GLYTELAAFGSADMYHEADP-----QRVMRFSCLACGDFAWACDAAGRVDTVVRRLRMSA 180
Query: 184 DQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD---------KKKDKGNKGF 234
Q+ ++G+ LS +++ L R+ ++H V P+ + N +
Sbjct: 181 RQMAQRYGEARLSRRVRRMLRRDPERSVPLVHMVRPRVRRNAGEAGKTASGGLGGVNMPW 240
Query: 235 HSKFVSVDE-NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
S + E FP++ R+ V +IYGRSP M+ LP ++ L E
Sbjct: 241 QSLTWETEGAEGLLHEGGFEEFPHLAARWDVAGGDIYGRSPGMDVLPDVKMLQEMARSQL 300
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE--LN 351
++PP ++ +L PG N + P+ NP +
Sbjct: 301 LAIHKVVNPPMRVP-SGFKQRLNLIPGGQNYVTPGQG--ESVGPLYQINPDIGAVTHKME 357
Query: 352 RLKESIRSLFLLDLFQV--LDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
++ ++R F DLF + + +++ +AAE +E+ EK +GP+I QSE + ++ R
Sbjct: 358 DVRRAVREGFFNDLFLMFTAEGRSNITAAEVLERGEEKLLMLGPVIERHQSELLDPLLER 417
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
IL G LP ++VEY S L + Q+ + + + + V L
Sbjct: 418 TYGILRRGGLLPPPPPELAG--RSMRVEYVSALAQAQRVVTAQAIRRFASDVSALAGVA- 474
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
P +D +D ++ PA ++R AEV +R R
Sbjct: 475 -PQVLDKVDFEQAVDELAAIAGVPARVVRSDAEVATLRAAR 514
>gi|227355860|ref|ZP_03840253.1| tail protein [Proteus mirabilis ATCC 29906]
gi|227164179|gb|EEI49076.1| tail protein [Proteus mirabilis ATCC 29906]
Length = 554
Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats.
Identities = 122/523 (23%), Positives = 205/523 (39%), Gaps = 39/523 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M+ + + + N L+ +R EL+ F P + ++ D T
Sbjct: 1 MSTPLKEQLLQQLNQLETERSSFEPHWRELSDFTRPRSTRFTASDVNRGDRRNSKIIDPT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
S A LSS + S IT P + W LA + V+ W + +
Sbjct: 61 ASLASSVLSSGMMSGITSPARPWFRLATPDPDLMDYGP--------VKLWLETTEQRMNE 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+RS L Y + FGT + D + IR + PL + Y++ +
Sbjct: 113 V--FNRSNLYQSLPLMYGDLGTFGTAAMAVVED-----SQRIIRTVHFPLGSYYIANSPS 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN-ERFTIIHAVYPKSLT-DKKK 227
VD YR+FT TV Q+V ++G +S +KS ++ + ++HAVYP K
Sbjct: 166 LSVDVCYRKFTMTVRQLVMEFGVDSVSDTVKSMWNSSQYSQWIEVVHAVYPNLERQTGKL 225
Query: 228 DKGNKGFHSKFVSVDENR--FFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
+ +K F S ++ V + E FP + R+ V +++YG S P M AL +
Sbjct: 226 EAKHKPFKSVYLEVAGDHEKVLRESGYDEFPIMAPRWEVNGEDVYGSSCPGMLALGGTKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIG--ALSREGRSLFQPVQFGN 342
L AQ +PP + K + + PG +N A VQ
Sbjct: 286 LQLMQKRKAQMIDKLTNPPLQVPASLKNQRVNTIPGGINYLDEANPTNKIQTIFDVQPVA 345
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSA--AESMEKTREKGAFVGPLIGGLQS 400
E++ ++ I + + +DLF+++ +RS +E EK +GP++ L S
Sbjct: 346 LKALLEDVQDTRQLIDTAYFVDLFRMMQMVNTRSMPIEAVVEMREEKLLQLGPVLQRLDS 405
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I+R IL ++ LP LKVEY S + + Q++ V S +
Sbjct: 406 ELLDKLINRTFSILVNKNLLPVAPDEMQGMD--LKVEYISVMAQAQKSIGVGSIERFAGF 463
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
V L P +D ++ D A ++ +V
Sbjct: 464 VGNLAKV--KPEALDKLNADDAIDNYASAIGVSPTIVATNEQV 504
>gi|310005791|gb|ADP00177.1| head-tail connector protein [Cyanophage NATL2A-133]
Length = 528
Score = 346 bits (888), Expect = 5e-93, Method: Composition-based stats.
Identities = 76/554 (13%), Positives = 151/554 (27%), Gaps = 56/554 (10%)
Query: 11 DRFNYLKNQRGELNYWMEELTGFLYP---YKNNA------QLRMWDTTGSEACIKLSSLL 61
R+N L R + E P +N W + G++ + LSS L
Sbjct: 6 QRYNKLSTGREQFLNVAYECAELTIPTLIMRNETPPNYAQFKTPWQSIGAKGVVTLSSKL 65
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ PP + L S + E ++ ++ + + S
Sbjct: 66 MLGLLPPSTSFFKLQLDDSKLGVEVPPE--SKSELDLSFAKIERMIME--AIAASTDRVQ 121
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTF 181
+ + +V G YM D PL+ + + + +
Sbjct: 122 IFTALKHLVVTGNALLYMGKDG----------MKMYPLNRYVVERDGNGDPVEIVTKEKI 171
Query: 182 TVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSV 241
+ + + + + I + K +H + +
Sbjct: 172 NKELLPKLPLPLKGDGVVD---DEQQGKDVDIYTCI--------KLTPKGWKWHQEVHDI 220
Query: 242 DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLH 301
+ P++ R+ E YGR E L ++ L + L + +
Sbjct: 221 MIPGSEGKAPAKKCPFLPLRFVTVDGEDYGRGRVEEFLGDLKSLEALMQALVEGSAAAAK 280
Query: 302 PPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + L GA+ + VQ G + + + L
Sbjct: 281 VVFTVSPSSVTKPQTLANAG--NGAIIQGRPDDIGVVQVGKTADFQTAYQLVNTLEKRLA 338
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
L + D +A E E +G L L +EF+ + R++ L +P
Sbjct: 339 EAFLIMNVRDSERTTAEEVRMTQMELEQQLGGLFSLLTTEFLLPYLHRKMHTLTQSKQIP 398
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
P V + L + Q +++ V + + G + ++ D
Sbjct: 399 ALPKGLVKPTI---VAGINALGRGQDRDAL------VQFITTIAQTMGPEALQRFVNADE 449
Query: 482 VSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
+ A L++ E Q+ + QQ G A
Sbjct: 450 AIKRLAAAQGIDVLNLVKSM----------EEQQAEQQAAQQQQMQASLMDQAGQLAGTP 499
Query: 541 AMEKKLTHDMMENS 554
M+ + E
Sbjct: 500 MMDPTKNPEGFEQM 513
>gi|144899435|emb|CAM76299.1| head-to-tail joining protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 502
Score = 346 bits (886), Expect = 8e-93, Method: Composition-based stats.
Identities = 114/507 (22%), Positives = 201/507 (39%), Gaps = 44/507 (8%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMWDTTGSEACIKLS 58
++ R+ K +R +E + P ++ R++D T ++A +L+
Sbjct: 17 LRQRYRKAKERRATWEAHWQECYDYALPLRDAVLHQPNPGEKKGDRLFDGTAADAVDQLA 76
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ L S +TPP +W GL ++A ++V D+V L RS F
Sbjct: 77 ASLLSELTPPWAQWFGLTAGP-------DLDEAERQQVAPLLDKVGAILQSH--FDRSNF 127
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE 178
+ Y VV GT C E + G R+ +VPL+ + +DS +R
Sbjct: 128 AVEMHQCYLDVVTGGTACLLFEE--AQPGEASAFRFTAVPLAQAVLEEGPDGKLDSSFRR 185
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
T+ + ++ L + + RF +I AV P G+ + +
Sbjct: 186 SELTLAALRQRFPAAQLDPSLIRRGEEDPQARFAVIEAVIPNQR-------GHYDYAAIL 238
Query: 239 VSVDENR--FFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
++ E + P+I R+ EIYGRSP M+ALP I+ N+ V + +
Sbjct: 239 EDATDDDEALLAEGRFGQSPFINFRWLKAPGEIYGRSPVMKALPDIKTANKVVELVLKNA 298
Query: 297 RLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLK 354
+++ A + L PG + A+ G + G L+ L+
Sbjct: 299 TIAVTGIWQADDDGVLNPANIKLIPGTIIPKAVGSAGLQPLE--SPGRFDISQLVLDDLR 356
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
IR L D D+ +A E +E++ + +G G LQSE + +I R + IL
Sbjct: 357 GRIRHALLADKLGQADN-PKMTATEVLERSADMARLLGATYGRLQSELLTPLILRAVTIL 415
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
+G +P L++++Y SPL + Q + L ++ + +LG P+ M
Sbjct: 416 RRRGEIPP----LLVDGHLVELQYRSPLAQSQAQRDAHNVLSWLSALAQLG-----PAGM 466
Query: 475 DHMDTDRVSRFSLWATNTPAVLIRDTA 501
+D +++ A N PA L+
Sbjct: 467 AVVDPAAAAQWLGRAFNIPADLMVAPQ 493
>gi|78357592|ref|YP_389041.1| hypothetical protein Dde_2550 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219997|gb|ABB39346.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 549
Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats.
Identities = 122/548 (22%), Positives = 224/548 (40%), Gaps = 44/548 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFL---------------YPYKNNAQLRM 45
M+ + ++ + Y+++QRGE + E+ ++ P R+
Sbjct: 1 MSISTLEEARGAAAYIESQRGEWDSRWREVADYVTGAGYGGGSWQEGTARPE-GRRGQRI 59
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
D T + A L++ L +TPP + W L + S +VR W D V
Sbjct: 60 IDATATRALRVLAAGLQGGLTPPARPWFRLRLADRGLM--------ESAEVRRWLDDVEA 111
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
L+ + S F + +T++ +G+ YMEAD + +R+ VP + +
Sbjct: 112 ALYA--ALAGSNFYQNSHALFTALAAYGSADMYMEADP-----QRVMRFCVVPHGDFAWA 164
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK 225
+ VD+V R F+ T Q K+G LS ++ A ++ V P++ D
Sbjct: 165 CDAAGRVDTVVRRFSMTAAQAAQKYGSDRLSRTVRRLAAVQPYAPVALVQLVRPRARRDP 224
Query: 226 K-KDKGNKGFHSKFVSVDENR-FFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+ +D NK + S E R A FP++ R+ V ++YG SP M+ LP ++
Sbjct: 225 RRQDSLNKPYESLTWEAQEPRRLLHVSGYAEFPHLCARWEVNGGQLYGHSPVMDVLPDVK 284
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L E ++PP + ++ +L PG N + P+ P
Sbjct: 285 MLQEMARSQLLAVHKVVNPPMRVPT-GFKQRLNLIPGAQNYV--NPAQPDALSPLYQIRP 341
Query: 344 --LPYHEELNRLKESIRSLFLLDLFQVLDD--KASRSAAESMEKTREKGAFVGPLIGGLQ 399
++ ++ SIR ++F + +++ +AAE ME+++EK +GP++ Q
Sbjct: 342 DIQAVTYKIEDVRRSIREGLFTEMFLLFAGESRSNVTAAEIMERSQEKLLLLGPVVERHQ 401
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
++ + +I R +L G LP LKVEY S L + Q+ + Q
Sbjct: 402 TDILDPLIGRAFGLLARAGRLPPAPDVLAG--RDLKVEYVSALAQAQRLSAAQGVRQLAG 459
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
V P +D +D D+ PA ++R +V+ +R++R +++
Sbjct: 460 DVSRFAAMA--PEVLDKIDFDQAVDELASIAGAPAGIVRSDEDVQLLRRERALKQAEQAG 517
Query: 520 QHLQQQLQ 527
+ L +
Sbjct: 518 RALLESAG 525
>gi|291335893|gb|ADD95488.1| T7-like head to tail connector [uncultured phage
MedDCM-OCT-S08-C41]
Length = 527
Score = 344 bits (881), Expect = 3e-92, Method: Composition-based stats.
Identities = 80/560 (14%), Positives = 168/560 (30%), Gaps = 57/560 (10%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYP----------YKNNAQLRMWDTTGSEACI 55
++R++ L + R + E + P + W + G+++ +
Sbjct: 1 MSKAKERYSQLSSDRHQFLDIAVECSELTLPHLITDDLRVRQNHKRLTTPWQSVGAKSVV 60
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
L++ L + PP + L L E ++ ++ + + +
Sbjct: 61 TLAAKLMLALLPPQTSFFKLQVRDDQLGEELPMEVRS--ELDLSFSKMERMVMD--KIAA 116
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
S + ++ G +M D + PL+ +S + V +
Sbjct: 117 SSDRVVVHQALKHLIVGGNALIFMGKDG----------LKNFPLNRFVVSRDGNGYVCEI 166
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFH 235
+ G + + N +E + V ++D G +H
Sbjct: 167 VTKELVNRKL----LGIDPMPDPHTVSGKGNNDEDAEVYTYVR-------RQDNGGWVWH 215
Query: 236 SKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
+ + P++V R+ E YGR E L +R L L +
Sbjct: 216 QEVDDKIIDGSRSTAPKDASPWLVLRFNAVDGEDYGRGRVEEFLGDLRSLEALSQALIEG 275
Query: 296 GRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKE 355
+ + A + + GA+ + VQ G + ++
Sbjct: 276 SAAAAKVVFLVNPAATTKPSTIAKAG--NGAIVQGRPEDVSVVQVGKTADFGTASQMAQQ 333
Query: 356 SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILD 415
R L L + +A E E +G L L EF+ ++R L ++
Sbjct: 334 IERRLGEAFLLLNIRQSERTTAEEVRLTQLELEQQLGGLFSLLTVEFLKPYLARTLMVMQ 393
Query: 416 SQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD 475
G LP+ P V + L + Q ES+ + + + G + M
Sbjct: 394 RSGQLPKIPREYVQPQI---VAGVNALGRGQDRESLTA------FIGTIAQTLGPEALMK 444
Query: 476 HMDTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIG 534
++D + A L++ +++ QQ++ + Q+
Sbjct: 445 YIDASEAIKRLAAAQGIDVLNLVKTPQQMQQDMQQQQAMSSQQQLLGQAGQMM------- 497
Query: 535 AKAAGRAMEKKLTHDMMENS 554
+ M+ D E +
Sbjct: 498 ---SAPLMDPSKNPDAAEMA 514
>gi|310005702|gb|ADP00089.1| head-tail connector protein [Cyanophage NATL1A-7]
Length = 543
Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats.
Identities = 75/552 (13%), Positives = 165/552 (29%), Gaps = 52/552 (9%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY----------KNNAQLRMWDTTGSEACIKL 57
+DR+ L R + + E + PY ++ W + G+++ + L
Sbjct: 2 KARDRYAQLTRGRTQFLHTAVECSRLTLPYLVQEDLSSRPEHQKLHTPWQSVGAKSVVNL 61
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
++ L + PP + L + + ++ ++ + + S S
Sbjct: 62 AAKLMLALLPPQTSFFKLQIQDNKIGVEFDPKIRS--EMDLSFAKMERMVMDY--ISASN 117
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ ++ G +M D + PL+ + + + +
Sbjct: 118 DRVVVHQALKHLIVSGNALIFMGKDG----------LKNYPLNRYVCNRDGNGNICEIVT 167
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ + + + +S + +++ ++ D G +H +
Sbjct: 168 KELISRKILGQDLPVPLPNSPGEDGYKTGSDDQDVEVYTYVRLD------DNGRWVWHQE 221
Query: 238 FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
T P++V R+ E YGR E L IR L L +
Sbjct: 222 AFDNILPGSRSTAPKNTSPWLVLRFNTVDGEDYGRGRVEEFLGDIRSLEGLSQSLVEGSA 281
Query: 298 LSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
+ + + + + GA+ + +Q G + ++ +
Sbjct: 282 AASKVVFLVSPSSTTKPKTIADAG--NGAIVQGRPDDVGVIQVGKTADFRTAQEQMMQLE 339
Query: 358 RSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
+ + L + +A E E +G L L EF+ ++R L IL
Sbjct: 340 KRINEAFLVLNVRQSERTTAEEVRLTQMELEQQLGGLFSLLTVEFLEPYLNRTLHILQRN 399
Query: 418 GNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+P+ P + + L + Q ES+ + L G + ++
Sbjct: 400 KEIPKIPKESVRPQI---IAGVNALGRGQDEESL------IRFAQTLSQTVGPEMMVKYL 450
Query: 478 DTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAK 536
D + A A LI+ + +QQ+ + Q + + G
Sbjct: 451 DPGEYVKRLAAAQGIDALNLIKSPETMAQEKQQQMQ----------EMQQGELLKQAGQL 500
Query: 537 AAGRAMEKKLTH 548
A M+
Sbjct: 501 AGTPMMDPSKNP 512
>gi|330007155|ref|ZP_08305897.1| hypothetical protein HMPREF9538_03586 [Klebsiella sp. MS 92-3]
gi|328535502|gb|EGF61962.1| hypothetical protein HMPREF9538_03586 [Klebsiella sp. MS 92-3]
Length = 559
Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats.
Identities = 125/533 (23%), Positives = 206/533 (38%), Gaps = 51/533 (9%)
Query: 1 MNQRSAKD-IQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDT 48
M + S K LKN+R EL F+ P R+ D
Sbjct: 1 MAELSPKQHYLKHLGQLKNERTSFEEHWRELAEFIDPRSTRFLTTERNNGSKRNTRIVDP 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
T S+A L S + S IT P + W LA + V+ W D V +
Sbjct: 61 TASKAARTLQSGMLSGITSPTRPWFKLATPDPEMMQYGP--------VKRWLDVVMTRMN 112
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
+RS L Y + FGT + D E+ IR +P+ + Y+S +H
Sbjct: 113 DVM--NRSNVYQSLPIIYRHLGVFGTAAMAVLED-----DEDVIRTHPLPIGSYYLSNSH 165
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLT-DKK 226
+ VD+ YR F+ T QIV ++G +S+ ++ A E F ++H P + K
Sbjct: 166 RLSVDTTYRVFSMTARQIVMQFGLDNVSNAVRGAWDNANYEAWFDVVHLTEPNIDRVNGK 225
Query: 227 KDKGNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGR-SPAMEALPTIR 283
+ NK F S + D ++ E P + R+ + +++YG P M AL T +
Sbjct: 226 LNSRNKAFKSVYFELSGDGDKLLREAGFDEPPILSPRWEINGEDVYGSNCPGMMALGTGK 285
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L A ++PP +A + K + +L PG + + L +P +P
Sbjct: 286 ALQLEQIRKANAIDKLVNPPMVAPTGLKNKLINLAPGGVTYVDEVDATK-LVRPAYAVSP 344
Query: 344 L--PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
+ ++ I + F DLF + +RS EK +GP++ L
Sbjct: 345 QLNDMLGSIADDRQMIEACFFSDLFNLFSTINTRSMPVEAVAAMQDEKLLQLGPVLERLN 404
Query: 400 SEFIGAM-----ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASA 454
E + R +I+ + PE + LKVEY S L + Q++ ++S
Sbjct: 405 DE-----FLDPFVDRTFNIMARRNLFPEPPEELQG--TPLKVEYVSILAQAQKSIGISSV 457
Query: 455 LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+ V V L +P+ +D ++ D+ PA ++ EV+ R
Sbjct: 458 ERFVGFVGNLAKA--NPAALDKLNIDQTIDEYGNMLGVPATIVNSDDEVQATR 508
>gi|288957023|ref|YP_003447364.1| hypothetical protein AZL_001820 [Azospirillum sp. B510]
gi|288909331|dbj|BAI70820.1| hypothetical protein AZL_001820 [Azospirillum sp. B510]
Length = 534
Score = 342 bits (877), Expect = 1e-91, Method: Composition-based stats.
Identities = 106/505 (20%), Positives = 199/505 (39%), Gaps = 44/505 (8%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYK----------NNAQLRMWDTTGSEACIK 56
+ + DR+ + +RG ++ P R++D T +A +
Sbjct: 21 EALLDRYRGARERRGVWESHWQDCYDHALPNGRPFHGGGTAGERRVNRLFDGTAPDAVEQ 80
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L++ L S +TPP +W G A + + D+ + RS
Sbjct: 81 LAASLLSELTPPWSRWFGFRPGPDLTGAERDR-------IAPLLDRAAGIIQAH--FDRS 131
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
F + + +V GT ME G +R+ +VPL++ + +D+ +
Sbjct: 132 NFAVEVHQAFLDLVTVGTASLLMEE--AAPGAVSSLRFTAVPLADAVLEEGPDGRLDATF 189
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHS 236
R T+ QI+ ++ L +++ A + + RF ++ AV P D +
Sbjct: 190 RRSEATLAQILQRFPGAGLPDELRRRAAEDPDHRFPLVEAVVP--------DGAAYRWGV 241
Query: 237 KFVSV-DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
S + + + + A P++ R+ E YGRSP M+ALP I+ N+ V + +
Sbjct: 242 VLDSGLADPSWLAQGRFAQSPFVNFRWLKAPGETYGRSPVMKALPDIKTANKVVELVLKN 301
Query: 296 GRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
+++ A + L PG + A+ G + G L+ L
Sbjct: 302 ASIAVTGIWQADDDGVLNPSTIRLVPGTIIPKAVGSAGLTPL--ANPGRFDVSQLVLDDL 359
Query: 354 KESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDI 413
+ IR L+D +D A +A E +E++ E +G G LQ+E + ++ R + I
Sbjct: 360 RGRIRHALLVDRLGPVD-SARMTATEVLERSVEMARLLGATYGRLQAELMTPLLLRAVSI 418
Query: 414 LDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSC 473
L +G +P L+++++ SPL + Q V + L+ +++V LG +
Sbjct: 419 LRRRGEIP----DITVDGRLVELQHRSPLAQAQAQRDVQATLRWLDSVKALGPEAEAVVD 474
Query: 474 MDHMDTDRVSRFSLWATNTPAVLIR 498
+ + A PA L+R
Sbjct: 475 -----AAATAHWLGEAFGVPAKLMR 494
>gi|239787361|emb|CAX83837.1| Head-to-tail joining protein [uncultured bacterium]
Length = 524
Score = 341 bits (873), Expect = 3e-91, Method: Composition-based stats.
Identities = 107/512 (20%), Positives = 192/512 (37%), Gaps = 46/512 (8%)
Query: 2 NQRSAKDI-QDRFNYLKNQRGELNYWMEELTGFLYPYK----------NNAQLRMWDTTG 50
N A+ + RF + +R +E F P + R++D T
Sbjct: 5 NDPDAQRVVLKRFEKARERRNVWEGHWQECYDFALPSRGGPLLSSQPGAKRTDRLFDGTA 64
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ +L++ L + +TPP +W GLA +K
Sbjct: 65 PDCVDQLAASLLAQLTPPWAQWFGLAAGPDLTPEEREVAAPVLEKAGAALQS-------- 116
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
RS F + Y +V GT E G R+ ++PL+ + + + +
Sbjct: 117 -HFDRSNFAIEMHQCYLDLVTAGTASLLFEEAPL--GSASAFRFTAIPLAQLALEESVEG 173
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKG 230
+D+ +R T+ I ++ L M + + RF ++ AV P ++
Sbjct: 174 RLDTTFRSSEMTISAIRERFPKAQLPESMGRKSKDDADARFKVVEAVLP--------ERH 225
Query: 231 NKGFHSKFVSVD--ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
+H+ E + P+I R+ E+YGRSP M++LP I+ N+
Sbjct: 226 GYAYHAILDGEGTGGAETLAEGRFEMSPFINFRWLKAPGEVYGRSPVMKSLPDIKTANKV 285
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPY 346
V + + +++ A + L PG + A+ G + + G
Sbjct: 286 VELVLKNATIAVTGIWQADDDGVLNPANIKLVPGTIIPKAVGSAGLTPLE--TPGRFDIS 343
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
L L++ I L D +D + +A E +E++ E +G G LQSE + +
Sbjct: 344 QLMLTDLRQRISHALLADRLGQID-APNMTATEVLERSAEMARLLGATYGRLQSELLTPL 402
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ R + IL +G +P + +++ Y SPL + E + LQ + V+ G
Sbjct: 403 VMRAVAILKRRGEIP----GLSIDGHQIELIYKSPLANERGREDAKNTLQWLTAVMSFG- 457
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIR 498
P +D +R+ A N PA L+R
Sbjct: 458 ----PPANQVVDLGAAARWLAKALNVPAELLR 485
>gi|167032756|ref|YP_001667987.1| putative tail protein [Pseudomonas putida GB-1]
gi|166859244|gb|ABY97651.1| putative tail protein [Pseudomonas putida GB-1]
Length = 564
Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats.
Identities = 107/540 (19%), Positives = 200/540 (37%), Gaps = 50/540 (9%)
Query: 1 MNQRSAKDI-QDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDT 48
M S + + + R + LK +R + +E++ F+ P + + ++ +
Sbjct: 1 MATDSPRKLAEKRLSALKTERSSWDTNAKEISDFILPMRSRVMCDDTNRGDRRNNKIINN 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
+ A +S + S IT P + W LA A F V+ W + T +
Sbjct: 61 RATMASRTTASGMMSGITSPARPWFNLAPVARAIMEFGP--------VKSWFYECTQRMR 112
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
RS L + Y + FGTGC +++ D IR + Y+S
Sbjct: 113 DV--FLRSNLYQVLPTCYQEMATFGTGCIWVDEHPD-----TVIRCEAFTWGEYYISNGA 165
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT--DKK 226
++YREF +TV+Q+V ++G + LS K+ N ++F ++ +
Sbjct: 166 DGRAAAIYREFKWTVNQLVQEFGVEALSPSSKALYENNNGDQFISCAQRVELNMNANPDR 225
Query: 227 KDKGNKGFHSKFVSVD--ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
N F + + E++ FP + R+ + YG P L ++
Sbjct: 226 AGSRNLPFSALTWEAGAPGDMVLEDRGYHEFPAMAVRWESMPGDAYGTGPGRICLGDVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRS--LFQPVQFGN 342
L + A+ +PP A E K + PG + +
Sbjct: 286 LQLYERQAARMTETGANPPLQAPVELKGQPSSTIPGGVTYVPMVGGQNQMAPIYQPNAAW 345
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDD-KASRSAAESMEKTREKGAFVGPLIGGLQSE 401
P ++ + I F +DLF ++ R+A E + EK +GP++ + E
Sbjct: 346 LSPIQAKIQEHEGRINEAFFVDLFLMVSQLDTVRTATEIAARKEEKMLMLGPVLERINDE 405
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPP-------------VSLLKVEYTSPLFKYQQA 448
+ +I R +I+ Q +P G + S ++ EY S L + Q++
Sbjct: 406 LLDPLIDRTFNIMLRQS-IPIWAGIIDGDPLLPPPPEELINANSEIQAEYVSILAQAQKS 464
Query: 449 ESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
++V + L P +D +++D++ A ++R EV IR+
Sbjct: 465 QNVLGLERFATLAGNLSGAF--PEVLDKVNSDQLIEEYADAIGVIPTVVRGADEVAAIRE 522
>gi|302339294|ref|YP_003804500.1| head-to-tail joining protein [Spirochaeta smaragdinae DSM 11293]
gi|301636479|gb|ADK81906.1| head-to-tail joining protein, putative [Spirochaeta smaragdinae DSM
11293]
Length = 560
Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats.
Identities = 120/523 (22%), Positives = 224/523 (42%), Gaps = 38/523 (7%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR----------MWDTTGSE 52
++SA++I F LK +R +E+T ++P ++ ++D T
Sbjct: 4 EKSAQEIIQTFEQLKQERSTWEDEYQEITEQIFPRRSVWTDNKGRASRSGGLIYDGTPIS 63
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
A L++ L + P +W L + R+W + V + ++ E
Sbjct: 64 ALNLLANGLVGYLVSPATRWFKLRPTQDELLQIRG--------ARQWLEIVENLIYD--E 113
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+RS F + ++ G Y++ D+ + Y +Y++ + +
Sbjct: 114 FNRSNFYEEIVEYFRDGGSIGIATIYVQEDIGRRMA----NYSCRHPKEIYIAEDRFGYI 169
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGN 231
D+V+R F T ++ ++G + LS +++ R+ ER IIHAVYP+ + KK +
Sbjct: 170 DTVFRRFFPTAKELEEEFGREALSDGVQNLCERSPYERVEIIHAVYPRKKRNPRKKGNRD 229
Query: 232 KGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
F S +V N E+ PY+V R+ +DE+YGR P +AL ++RLN +
Sbjct: 230 MKFASAYVEGGSNHKIRERGYERLPYVVWRWSTNSDEVYGRGPGYDALVDVKRLNRLSRD 289
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE-L 350
+ + ++++ PP + + + + P +N + + + G +
Sbjct: 290 MLKQSQMAVDPPLAVPEKMRGK-VNWVPRGLNYY---QNPNEVPVALNPGMQFQVGLDRE 345
Query: 351 NRLKESIRSLFLLDLFQVLDDKA-SRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
+++ I F+ D F +L+ +A E ME+ EK A +G +IG + SEF+ +I
Sbjct: 346 QHMQQIIEKHFMTDFFLMLEQAPKEMTATEVMERQSEKAAVLGTVIGRISSEFLDPIIDI 405
Query: 410 ELDILDSQGNL----PECEGADNPPVSLLKVEYTSPLFKYQQAESV-ASALQGVNTVVEL 464
DI L PE A ++++Y PL + Q+ V A Q +N V +
Sbjct: 406 TFDIAMKGKRLPPPPPEFAEAMYKTNGGIEIDYLGPLAQAQKKFHVTQGAQQSLNAVAPI 465
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+P D ++ D+++ L A P I D +V+ IR
Sbjct: 466 --MQINPQVADLINWDQLTMEILHAYGMPQKAIVDLRDVQKIR 506
>gi|221213955|ref|ZP_03586928.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221166132|gb|EED98605.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 549
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 135/546 (24%), Positives = 235/546 (43%), Gaps = 31/546 (5%)
Query: 4 RSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQLRMWDTT 49
+ + + +K +R ++ F+ P + RM+D+T
Sbjct: 7 KLLEALNADHGRMKEKRQSYEAVWNDVIDFMMPRLDKFGQMPRPDSEKGRERSQRMFDST 66
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
A + + S+ITP Q WH L S A V+ + V LF
Sbjct: 67 APLALRNFVAAMDSMITPATQVWHRLKTSNDAL--------NEVPSVKAYLQAVVRALFA 118
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
R R + GF + + Y S+ FG G +E DV GI Y +VP+ ++ + N+
Sbjct: 119 VRYRWQGGFTTQMGATYQSIGLFGPGALMIEHDVG-----HGIVYRNVPMQRLWFAENNA 173
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-D 228
++D + + T+ Q ++G + LS M++AL R+ + T H V P++ D +K D
Sbjct: 174 GLIDKTHVLWRLTLRQAAQRFGRENLSPSMQTALERDPEKTHTFYHVVEPRADRDPRKLD 233
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
N F S ++ +R + TFP+ +GR+ V D++YG SPA +A+P IR N+
Sbjct: 234 GRNMRFGSYWLDEGRDRIIQNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDIRMANDM 293
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ + + PP +A + FDL+ G +N G L G + +P+ G
Sbjct: 294 AKTNIRGAQKMVDPPLLASEDGVLEGFDLRSGSLNWGGLDERGNEMVKPLLTGKQAQIGI 353
Query: 349 EL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
E +++I F + LFQ+L D +A E +++ +EKG + P +G Q+E +G +I
Sbjct: 354 EFSQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQAELLGPLI 413
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
RE+DIL G P + + VEY SPL K +A A+ LQ + + +
Sbjct: 414 QREVDILAEAGQFPPMPQELIDAGADVDVEYDSPLNKAMRAGEGAAILQWLQQLGVVA-- 471
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
DP+ ++ R+ + P + E++ ++ +
Sbjct: 472 QFDPNAAKLVNGHRIGKLLADFGGVPVEALNTDEELQASAAAEAQAAQMQQVLEAAPVAA 531
Query: 528 QTSQDI 533
+D+
Sbjct: 532 GAIKDL 537
>gi|148724480|ref|YP_001285446.1| head to tail connector [Cyanophage Syn5]
gi|145588125|gb|ABP87944.1| head to tail connector [Synechococcus phage Syn5]
Length = 542
Score = 334 bits (855), Expect = 4e-89, Method: Composition-based stats.
Identities = 72/560 (12%), Positives = 165/560 (29%), Gaps = 40/560 (7%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLL 61
Q R++ ++ R + PY + + + GS+ LSS L
Sbjct: 6 QARYSAMRADREDFLDMARRCAALTLPYLLTEDGHASGGRLQQPYQSLGSKGVNALSSKL 65
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P + L + + + ++ ++ + ++ + S
Sbjct: 66 MLSLFPIQTSFFKLQINDAEIASVPELTPEVRSEIDMNLSKMEKMVM--QQIAESSDRVQ 123
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTF 181
L + ++ G + PL + + V +
Sbjct: 124 LTAAMKHLIVTGNVLVFAGKKT----------LKVYPLDRYVIERDGDGNVIEIITRELV 173
Query: 182 TVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK----KKDKGNKGFHSK 237
+ +++ + L S + +F + ++ + K G +H +
Sbjct: 174 DRSLLPAEFQKQSLLEGKDSNAVGEDGPKFGVAQGKGGRNDAEVFTCCKLVDGQHRWHQE 233
Query: 238 FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
+ + P++ R+ V E YGR E + L+ L +
Sbjct: 234 CDGKEIKGSRSSSPLKHSPWLPLRFNVVDGESYGRGRVEEFFGDLSSLDALTRSLIEGSA 293
Query: 298 LSLHPPTIAVSEAKQRNFDL-KPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKES 356
+ + A + L + G I E S+ Q + + E + L +
Sbjct: 294 AAAKVVFMVSPSATTKPQSLARAGTGAIIQGRAEDVSVVQANKGADFRTVQEMIRDLSQR 353
Query: 357 IRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDS 416
I FL + +A E E E + + G L E + ++R+L ++
Sbjct: 354 ISDAFL---ILNVRQSERTTATEVREVQMELDRQLSGIYGSLTVELLTPYLNRKLHLMQR 410
Query: 417 QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDH 476
LP P V + + + ++ + + +G G +
Sbjct: 411 SKQLPSLPKGLVMPTV---VAGLGGVGRGEDRAAL------IEFMQTVGQAMGPEALQQF 461
Query: 477 MDTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQT--SQDI 533
+D + A+ L++ + + QQ + Q+ QL ++ + +
Sbjct: 462 IDPTEFLKRLAAASGIDTLNLVKSPETMANEAQQAQQQQMTASLMGQAGQLAKSPIGEKM 521
Query: 534 GAKAAGRAMEKKLTHDMMEN 553
+ E E+
Sbjct: 522 MQQINAPGQEAPAGPQTGED 541
>gi|48697195|ref|YP_024925.1| hypothetical protein BcepC6B_gp05 [Burkholderia phage BcepC6B]
gi|47779001|gb|AAT38364.1| gp05 [Burkholderia phage BcepC6B]
Length = 549
Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 135/514 (26%), Positives = 233/514 (45%), Gaps = 31/514 (6%)
Query: 4 RSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQLRMWDTT 49
+ + + +K +R ++ +L P + +M+D+T
Sbjct: 7 KILQALNADHGRMKEKRQSYEAVWNDVIDYLMPRLDKFGQLPRPDSEKGRERSQKMFDST 66
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
A + + S+ITP Q WH L A V+ + V TLF
Sbjct: 67 APLALRNFVAAMDSMITPATQLWHRLKTGNDAL--------NEIASVKAYLQGVVRTLFA 118
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
R R + GFV + + Y S+ FG G +E DV + GI Y +VP+ ++ + N+
Sbjct: 119 ARYRWQGGFVTQMGATYQSIGLFGPGALMIEHDVGK-----GIVYRNVPMQRLWFAENNS 173
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-D 228
++D + ++ T+ Q ++G + LS M+S L ++ + HAV P++ D +K D
Sbjct: 174 GLIDKTHVQWELTLRQAAQRFGRENLSPSMQSTLEKDPEKSAIFYHAVEPRADRDPRKLD 233
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
N F S ++ +R + TFP+ +GR+ V D++YG SPA +A+P +R N+
Sbjct: 234 GRNMQFASYWLDEGRDRIVQNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDVRMANDM 293
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ + + PP +A + FDL+ G +N G L+ +G + +P+ G
Sbjct: 294 AKTNIRGAQKLVDPPLLANEDGVLDGFDLRSGALNWGGLNDKGEEMVKPLLTGKQAQIGI 353
Query: 349 EL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
E +++I F + LFQ+L D +A E +++ +EKG + P +G QSE +G MI
Sbjct: 354 EFAQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQSELLGPMI 413
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
+RE+DIL G LP+ + + VEY SPL K +A A+ LQ + + +
Sbjct: 414 AREVDILAEAGQLPDMPQELIDAGADVDVEYDSPLNKAMRAGEGAAILQWLQQLGIVS-- 471
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTA 501
DP+ + R++R P +
Sbjct: 472 QFDPAAAKVPNGARIARLLADYGGVPVEAMSTDE 505
>gi|54302247|ref|YP_132240.1| putative head-tail connector protein [Photobacterium profundum SS9]
gi|46915668|emb|CAG22440.1| hypothetical protein PBPRB0567 [Photobacterium profundum SS9]
Length = 552
Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats.
Identities = 111/574 (19%), Positives = 208/574 (36%), Gaps = 42/574 (7%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA-----------QLRMWDTTG 50
+ + F L + EL ++ P + + D +
Sbjct: 1 MKTIRQQCDSIFQGLDSDYAPWESHYRELANYIQPRRQRFSKDSVNRGGAHNSNIIDPSA 60
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ A + + S IT P KW L K+ + VR + D D + G
Sbjct: 61 TLAMRVAAGGMYSGITNPVTKWLRLNVED--------KDLNKYHIVRLYLDTCADLILGM 112
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
+ S F + S + ++ + E D +R+ P+ + + + +
Sbjct: 113 --LASSNFYNVVPSMFMDLLTYSGSSVGFEKDPL-----TVMRFYPNPIGSYRLGIGPRQ 165
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENER-FTIIHAVYPKSLTDKKK-D 228
V + R+ + V Q+V K+G +S +KSA + + I H V+ +
Sbjct: 166 NVSTHGRKVEYRVSQVVEKFGLDNVSQSIKSAYRSGKYNQLTEIRHLVFDNPDFVPRAFS 225
Query: 229 KGNKGFHSKFVSVDENR--FFEEKQIATFPYIVGRYRVRADEIYGR-SPAMEALPTIRRL 285
K S + ++R F FP++ R+ V ++ YG P M AL +I+ L
Sbjct: 226 AVRKPICSIWYDPADDRNPFLRRSGFDEFPFVTPRWEVIGNDTYGSFGPGMLALGSIKGL 285
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
+ + + L PP + S K L PG + + + Q PL
Sbjct: 286 QKDQRDKYEAQDKMLKPPMVGPSSLKNNPRSLLPGAVTFVDNQQGQQGFTPAFQTNFPLN 345
Query: 346 YHEE-LNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
Y E + + I S F DLF + K++ +A E + EK +GP++ E
Sbjct: 346 YQLESIRDTRAIIDSAFFKDLFLAVIDIGKSNTTATEIAARKEEKLLMLGPVLNRFNEEG 405
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ ++S ++ +G LPE + +EY L + Q+A ++S + V +
Sbjct: 406 LDPIVSASFYEMNRRGMLPEPPPEL--DGVDVNIEYVGLLQQAQKAVGISSIERTVGFIG 463
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHL 522
L +D +D D V T T ++ + +V+ R R Q++ + +
Sbjct: 464 NLAGVR--QDVLDKVDFDSVVDIYTDITGTTPRILFNEQQVKATRDARIQQQQREQMAAM 521
Query: 523 QQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
++D A + + + + N G
Sbjct: 522 ----AAPAKDGAEAAKLLSETRTDESNGLSNFLG 551
>gi|303328393|ref|ZP_07358830.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861387|gb|EFL84324.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 567
Score = 329 bits (843), Expect = 8e-88, Method: Composition-based stats.
Identities = 112/521 (21%), Positives = 193/521 (37%), Gaps = 46/521 (8%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA-------------QLRMWDTTGSEA 53
K + R+ L +R ++L P + D+TG A
Sbjct: 6 KKLHQRWEMLVEKRRPWISTWKDLAALYLPTGYRDADDGNARGGKNLLNPEVVDSTGIYA 65
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L++ + +T P + W GL R W D+V + +
Sbjct: 66 LRTLAAGMQGGMTSPARPWFGLRLEGGDSGDGGIT-------ARAWIDEVVERMRTI--L 116
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
S F G + Y + FGT C + E+ G + + V+ VD
Sbjct: 117 HTSNFYGVIYQAYAQLAAFGTACVF------ERADMSGFTFDCCQAGTFVLDVDAGGRVD 170
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALAR--NENERFTIIHAVYPKSLTDKKKDKGN 231
+V R+ T Q+ ++G+ L +K++L N R + HAVYP+ +++ N
Sbjct: 171 TVMRKIWLTARQMAQEFGEDALPDMVKTSLNNASMGNVRHAVFHAVYPRREPGLRRETIN 230
Query: 232 ---KGFHSKFV-----SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+ F S + E +FP+ R+ V + ++YG SPAM+ +P R
Sbjct: 231 GARRPFASVYWMRGMSGAGGYHPLRESGFDSFPFFGVRWNVLSGDVYGTSPAMDTMPDCR 290
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L + + + PP +E + DL PG +N ++ + PV P
Sbjct: 291 MLQQMAKTTLKGVHKMVDPPVNVAAELQSVGVDLTPGGVNYVSMMGNNGAAVTPVLKVQP 350
Query: 344 L--PYHEELNRLKESIRSLFLLDLFQVLDDKASRS--AAESMEKTREKGAFVGPLIGGLQ 399
+ ++++ I+ DLF++L R A E + EK +GP++ L
Sbjct: 351 DVAAAQAMIQQVQQQIKEGLYNDLFRMLLGTNRRQITATEVDAREAEKMILIGPVLERLH 410
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
E +I R ++D LP LKVE+ S L + Q+ S Q +
Sbjct: 411 DELFIPLIDRTFALMDKFNALPPVPEELAGRG--LKVEFISTLAQAQKLVSTGGIQQLLA 468
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDT 500
+ DPS +D ++ DR+ A ++R
Sbjct: 469 FIGGAAQV--DPSVLDALNGDRLVDKYNEYLGVDAGVLRPQ 507
>gi|332875224|ref|ZP_08443057.1| hypothetical protein HMPREF0022_02690 [Acinetobacter baumannii
6014059]
gi|332736668|gb|EGJ67662.1| hypothetical protein HMPREF0022_02690 [Acinetobacter baumannii
6014059]
Length = 547
Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats.
Identities = 106/527 (20%), Positives = 204/527 (38%), Gaps = 39/527 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN-------------NAQLRMWD 47
M++ A+ + R + LK R L E + P + + + D
Sbjct: 1 MSELVAR-LCKRLSELKAARNRLEPHWSECYRYAAPERQQSFIGDDVTDTRKTQRAELLD 59
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
+T SEA L S + S TP W + + A + +W D+V
Sbjct: 60 STLSEATQLLVSSIISGTTPANALWFKAVPN-------GVDDPAELTEGEKWLDEVCQ-- 110
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS-V 166
F +R + + + V G G Y + D + G + + + Y++
Sbjct: 111 FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVD---RHAGGGYVFQTWDIGQCYLAST 167
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+ K
Sbjct: 168 RQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTGYIK 227
Query: 227 KDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D+ F S V VDE E FP+++ R+R + +YG ALP
Sbjct: 228 GDRQLMPKEMPFASYHVEVDEKIVLRETGYNEFPFVIPRFRKIPNSVYGTGQVSIALPDA 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
+ N+ + + + +S V + ++ G I ++ + + + G
Sbjct: 288 KTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVN--DVNSLKRIDDGK 345
Query: 343 PLPYHEE-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ L L+ +IR + D Q D + +A E + +GPL G Q+E
Sbjct: 346 GYQVGVDLLAHLQGAIRKKMMADQLQ-PADGPAMTATEVHVRVDLIRQQLGPLYGRWQAE 404
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ R + G + E K + S L + QQ E V + + + +
Sbjct: 405 LLTPLLERTFGLAYRAGVIGEAPEEMQGRNLSFK--FISALARSQQLEEVTAIERFLAGM 462
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+ DPS +D++D D V++ S P ++R +++ IR+
Sbjct: 463 SNVA--QIDPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDAIRK 507
>gi|293609619|ref|ZP_06691921.1| predicted protein [Acinetobacter sp. SH024]
gi|292828071|gb|EFF86434.1| predicted protein [Acinetobacter sp. SH024]
Length = 547
Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats.
Identities = 106/527 (20%), Positives = 204/527 (38%), Gaps = 39/527 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN-------------NAQLRMWD 47
M++ A+ + R + LK R L E + P + + + D
Sbjct: 1 MSELVAR-LCKRLSELKAARNRLEPHWSECYRYAAPERQQSFIGDDVTDTRKTQRAELLD 59
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
+T SEA L S + S TP W + + A + +W D+V
Sbjct: 60 STLSEATQLLVSSIISGTTPANALWFKAVPN-------GVDDPAELTEGEKWLDEVCQ-- 110
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS-V 166
F +R + + + V G G Y + D + G + + + Y++
Sbjct: 111 FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVD---RHAGGGYVFQTWDIGQCYLAST 167
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+ K
Sbjct: 168 RQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTGYIK 227
Query: 227 KDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D+ F S V VDE E FP+++ R+R + +YG ALP
Sbjct: 228 GDRQLMPKEMPFASYHVEVDEKNVLRETGYNEFPFVIPRFRKIPNSVYGTGQVSIALPDA 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
+ N+ + + + +S V + ++ G I ++ + + + G
Sbjct: 288 KTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVN--DVNSLKRIDDGK 345
Query: 343 PLPYHEE-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ L L+ +IR + D Q D + +A E + +GPL G Q+E
Sbjct: 346 GYQVGVDLLAHLQGAIRKKMMADQLQ-PADGPAMTATEVHVRVDLIRQQLGPLYGRWQAE 404
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ R + G + E K + S L + QQ E V + + + +
Sbjct: 405 LLTPLLERTFGLAYRAGVIGEAPEEMQGRNLSFK--FISALARSQQLEEVTAIERFLAGM 462
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+ DPS +D++D D V++ S P ++R +++ IR+
Sbjct: 463 SNVA--QIDPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDAIRK 507
>gi|169795385|ref|YP_001713178.1| putative phage related protein [Acinetobacter baumannii AYE]
gi|169148312|emb|CAM86177.1| conserved hypothetical protein; putative phage related protein
[Acinetobacter baumannii AYE]
Length = 547
Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats.
Identities = 106/527 (20%), Positives = 202/527 (38%), Gaps = 39/527 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN-------------NAQLRMWD 47
M++ A+ + R + LK R L E + P + + + D
Sbjct: 1 MSELVAR-LCKRLSELKAARNRLEPHWSECYRYAAPERQQSFIGDDVTDTRKTQRAELLD 59
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
+T SEA L S + S TP W + + A +W D+V
Sbjct: 60 STLSEATQLLVSSIISGTTPANALWFKAVPN-------GVDDPAELTDGEKWLDEVCQ-- 110
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS-V 166
F +R + + + V G G Y + D + G + + + Y++
Sbjct: 111 FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVD---RHAGGGYVFQTWDIGQCYLAST 167
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+ K
Sbjct: 168 RQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTGYIK 227
Query: 227 KDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D+ F S V VDE E FP+++ R+R +YG ALP
Sbjct: 228 GDRQLMPKEMPFASYHVEVDEKIILRETGYNEFPFVIPRFRKIPHSVYGTGQVSIALPDA 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
+ N+ + + + +S V + ++ G I ++ + + + G
Sbjct: 288 KTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVN--DVNSLKRIDDGK 345
Query: 343 PLPYHEE-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ L L+ +IR + D Q D + +A E + +GPL G Q+E
Sbjct: 346 GYQVGVDLLAHLQGAIRKKMMADQLQ-PADGPAMTATEVHVRVDLIRQQLGPLYGRWQAE 404
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ R + G + E K + S L + QQ E V + + + +
Sbjct: 405 LLTPLLERTFGLAYRAGVIGEAPEEMQGRNLSFK--FISALARSQQLEEVTAIERFLQGL 462
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+ DPS +D++D D V++ S P ++R +++ IR+
Sbjct: 463 SSVAEL--DPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDAIRK 507
>gi|18640510|ref|NP_570351.1| head-tail connector protein [Synechococcus phage P60]
gi|18478740|gb|AAL73289.1| head-tail connector protein [Synechococcus phage P60]
Length = 555
Score = 325 bits (832), Expect = 2e-86, Method: Composition-based stats.
Identities = 76/542 (14%), Positives = 164/542 (30%), Gaps = 45/542 (8%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSS 59
Q ++ L+ R + + PY + W + GS+ L+S
Sbjct: 4 SAQAKYMMLRADREDYLDSGRQSARLTLPYILTDEGHVQGGYLPTPWQSVGSKGVNVLAS 63
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L + P + L + + E ARS ++ ++ + ++ + S
Sbjct: 64 KLMLSLFPVNTSFFKLQINDAEIDNLGMDEQARS-EIDLSLSRIERIVT--QDIAESSDR 120
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
L+ ++ G Y PL +S + + V + E
Sbjct: 121 VHLEMAMKHLIVTGNALLYQGKK----------NLKLYPLDRFVVSRDGEGNVMEIVTEE 170
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKS---------LTDKKKDKG 230
+ ++ + A E+ + A + T + G
Sbjct: 171 QIDRSLLPEEFQKVGGLEGAPDSNAVGEDGPKMGVTAPGGRDKGKSNDALVYTYVCRKDG 230
Query: 231 NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
+H + P+I R+ + E YGR E + ++ L
Sbjct: 231 QVKWHQECDGKVIPGSNSSAPYTHNPWIPLRFNIVDGEAYGRGRVEEFMGDLKSLEALSQ 290
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
+ + S + A + +L GA+ + VQ + L
Sbjct: 291 AMVEGSAASAKVVFMVSPSATTKPQNLALAA--NGAIIQGRPDDVSVVQANKAADFRTVL 348
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
+++ + + L + +A E +E +G + L +E + ++R+
Sbjct: 349 EMIQKLEQRISDAFLMLQVRQSERTTATEVQATVQELNEQIGGIYSNLTTELLQPYLARK 408
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
L +L Q LP+ P + + + Q + Q + + L G
Sbjct: 409 LHLLQKQRKLPQLPKDLVQPTVVAGLWGV---GRGQDKQ------QLMEFITTLAQTMGP 459
Query: 471 PSCMDHMDTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQT 529
M +++ + A LI ++ + + Q++ M + L Q Q
Sbjct: 460 EIAMKYINPTEFIKRLAAAQGIDTLQLINSPETMKQL---GDQQKQDMVQASLINQAGQL 516
Query: 530 SQ 531
++
Sbjct: 517 AK 518
>gi|225158777|ref|ZP_03725094.1| hypothetical protein ObacDRAFT_8203 [Opitutaceae bacterium TAV2]
gi|224802612|gb|EEG20867.1| hypothetical protein ObacDRAFT_8203 [Opitutaceae bacterium TAV2]
Length = 562
Score = 324 bits (830), Expect = 3e-86, Method: Composition-based stats.
Identities = 114/566 (20%), Positives = 218/566 (38%), Gaps = 42/566 (7%)
Query: 4 RSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN------------AQLRMWDTTGS 51
+ A+D+ R+ +++ + ++ P K + ++D+T +
Sbjct: 8 KLAEDLIGRYEAGLSRQANWRSRWHDAARYILPSKGDILSMGDKHGGEAQTTDIYDSTAN 67
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
E+ + ++ L S + P G+ W + S V EW D T
Sbjct: 68 ESALVYAAGLLSSLVPAGELWFRFSARP-----------GASAPVVEWFDDCTHR--AAA 114
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGI-RYISVPLSNVYMSVNHQN 170
S F + + + F + E +G G+ + +VP+ + + +
Sbjct: 115 ALHASNFYLGIHEDFMDMAGFSIASLFCEEGAALRGQRGGLLNFTNVPVGTFVIEEDAEG 174
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLS----SKMKSALARNENERFTIIHAVYPKSLTDKK 226
+VD+V+REF FT Q KWG+ LS + S A + ++RF IIHAVYP+ +
Sbjct: 175 LVDTVFREFRFTARQCAQKWGEDKLSKPMLDALNSKTASDRDKRFQIIHAVYPRRDGKQG 234
Query: 227 KDKGNK-GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
G K S +V EE P V R +EIYGR P + +P I+ +
Sbjct: 235 PGIGKKRPIASVYVDKQAIHVIEEGGFYEMPIAVARLLRGNNEIYGRGPGDQVMPEIKLV 294
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
N +L ++PP +A ++ R D +PG + S +
Sbjct: 295 NRMERDLLLSLEQQVNPPWLAPQDSSWRP-DNRPGGVFYWDASNPNNKPERLRDTARLDI 353
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDKASR----SAAESMEKTREKGAFVGPLIGGLQSE 401
+ LN +E IR + +D+F++L + + +A E + +EK P+ + E
Sbjct: 354 GDKVLNDKREVIRRAWFVDMFKMLSNPDAMKRDKTAFEVAQLMQEKLVLFHPMFARITQE 413
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ R +IL G +++Y S + +A + Q ++ +
Sbjct: 414 KLNPVLERVFNILMRAGIFAPPP-MAEGESLEYEIDYVSKIALAIKAAQNGALAQMMDLI 472
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
+ T DP+ ++ + +R + P EV ++ Q + + + +
Sbjct: 473 GGMA--TFDPTVALVINWKKAARGVARNSGLPQEWQNSEEEVAEMMQAQAQANQAAQLEQ 530
Query: 522 L---QQQLQQTSQDIGAKAAGRAMEK 544
+ Q +Q +G +A A +
Sbjct: 531 MASAANQAAGAAQKLGPQAQQAATDA 556
>gi|221201497|ref|ZP_03574536.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221207947|ref|ZP_03580953.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221172132|gb|EEE04573.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221178765|gb|EEE11173.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 549
Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats.
Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 31/546 (5%)
Query: 4 RSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQLRMWDTT 49
+ + + +K +R ++ FL P + RM+D+T
Sbjct: 7 KLLEALNADHGRMKEKRQSYEATWNDVIDFLMPRLDKFGQLPRPDSEKGRERSQRMFDST 66
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
A + + S+ITP Q WH L S + V+ + +V LF
Sbjct: 67 APLALRNFVAAMDSMITPATQLWHRLKASNDVL--------NENAAVKAYLQEVVRVLFA 118
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
R R + GFV + + Y SV FG G +E DV + GI Y +VP+ ++ + N+
Sbjct: 119 VRYRWQGGFVTQMGATYQSVGLFGPGALMIEHDVGQ-----GIVYRNVPMQRLWFAENNA 173
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-D 228
++D + ++ T+ Q ++G + LS M+SAL R+ + H V P++ D +K D
Sbjct: 174 GIIDKTHVQWELTLRQAAQRFGRENLSPSMQSALERDPEKSAIFYHIVEPRADRDPRKLD 233
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
N F S ++ +R + TFP+ +GR+ V + YG SPA +A+P R +N+
Sbjct: 234 GRNMRFGSYWLDEGRDRIIQNSGFRTFPFAIGRFYVGTGDAYGGSPACDAMPDTRMVNDM 293
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ + + PP + + FDL+ G +N G L +G + +P+ G
Sbjct: 294 AKTNIRGAQKLVDPPLLVSEDGSLEGFDLRSGSLNWGGLDEKGNEMVKPLLMGKQAQIGI 353
Query: 349 EL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
E +++I F + LFQ+L D +A E +++ +EKG + P +G QSE +G +I
Sbjct: 354 EFTQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQSELLGPLI 413
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
RELDIL LPE + +++EY SPL K +A A+ LQ + + +
Sbjct: 414 ERELDILAEAAQLPEMPRELINAGANVEIEYDSPLNKAMRAGESAATLQWLQQLSVVA-- 471
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
D M + R++R A P + E++ +V +
Sbjct: 472 QFDLRAMKAPNGLRIARMLADAGGVPVEAMNTDEELQAQEAAEAQAMQVQQALAAAPVAA 531
Query: 528 QTSQDI 533
+D+
Sbjct: 532 GAIKDL 537
>gi|294648400|ref|ZP_06725899.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825705|gb|EFF84409.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
Length = 558
Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats.
Identities = 116/574 (20%), Positives = 225/574 (39%), Gaps = 44/574 (7%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------------NAQLRMWDTT 49
A+ + R + LK+ R + ++ + P + A+ ++DTT
Sbjct: 3 AQQLLKRLSQLKSDRIKHEAHWKDCYKYCAPERQQSFADASATALEQERKQARTDLFDTT 62
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
E L S + S T P W S ++ + +W QV LF
Sbjct: 63 SVEGIQLLVSSIVSGTTSPVSIWFKSVPS-------GVDTPSQLTEGEQWLSQVDQFLF- 114
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM-SVNH 168
R S F + F T +V G Y D + G + + + N Y+ S
Sbjct: 115 -RNIHASNFDSEVTDFLTDLVVAGWAVLY----ADTNREKGGFTFNTWSIGNCYISSTQA 169
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT----- 223
++D++YREF + +QIVS++G +S K+++AL + +++FT++ A++P+
Sbjct: 170 NGLIDTIYREFELSAEQIVSEFGIDNVSDKVRTALEKKPDQKFTLVQAIFPRDSKLIKGE 229
Query: 224 DKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+ K+ + F S + +E FP +V R++ D YG + +
Sbjct: 230 EGKRVSTSMPFASYTIEAQSKHILKESGFEEFPCVVSRFKKIPDSHYGLGMGSMVISDAK 289
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
N+ + Q L+L IA ++ L+ I A + + + G+
Sbjct: 290 TANQIMKLSLQTAELNLGGLWIAQNDGNINPHTLRIRPNAIIAANT--VDSIKRLDTGSA 347
Query: 344 LP--YHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ L + I+ + D + +A E + + +G + +QSE
Sbjct: 348 SVGLGLDFLQHFQAKIKRTLMSDQL-TPQGSSPLTATEIQARVQVYRNQLGSIFSRMQSE 406
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
++ ++ R + G LP + + +P+ Q+ E V + + V
Sbjct: 407 YLQVLLERTWGLAMRSGVLPPAPEELMQASR-ISFNFINPMAASQKLEWVTAIQNLMLNV 465
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
++ D + MD+++ D + + A + P IR E+ ++RQ ++ Q++ M+EQ
Sbjct: 466 SQMA--QIDQTVMDNLNLDAMVQVMADALSVPVEAIRTDEEIAELRQAKQEQQQAMQEQQ 523
Query: 522 LQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSY 555
QQ L G A + K +T D + +
Sbjct: 524 QQQALMSQVGQTGLDIA-KDQAKNMTPDQLGAMF 556
>gi|48696640|ref|YP_024419.1| hypothetical protein VP2p04 [Vibrio phage VP2]
gi|48696684|ref|YP_024978.1| hypothetical protein VP5_gp03 [Vibrio phage VP5]
gi|40806147|gb|AAR92065.1| hypothetical protein [Vibrio phage VP5]
gi|40950038|gb|AAR97629.1| hypothetical protein [Vibrio phage VP2]
Length = 547
Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats.
Identities = 108/558 (19%), Positives = 202/558 (36%), Gaps = 44/558 (7%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQLRMWDTTGSE 52
I R ++LK R + + + ++ P +++ ++D+T +
Sbjct: 4 SKIVKRLDFLKTDRKNVEQIWDCIRKYIMPMRSDFFSDLRSEGSINWNQNREVFDSTAGD 63
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
LSS L +T P KW LA F KE + R+W + T ++
Sbjct: 64 GLETLSSSLHGSLTSPATKWFELA--------FRDKELNSDDECRKWLENATHDVYS--A 113
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
S F Y + +G + +++ E + + S P+ + Y + + V
Sbjct: 114 LQDSNFNLEANETYIDLCGYGNAIMV---EEEDEDEEGSVVFQSSPIQDSYFEEDSRGQV 170
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGN- 231
+ YR F +T QI ++GD+ + N+ V KK N
Sbjct: 171 VNFYRVFRWTPAQIYDRFGDEGTPEAIIKKAKEASNQAALKQEVVMCVFTRYDKKQNRNA 230
Query: 232 --------KGFHSKFVSVDENRFF-EEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
+ F K++ + EE P R+R A +G P+ ALP +
Sbjct: 231 GTVLAPTERPFGKKWILKEGAVQLGEEGGYYEMPAYAIRWRKSAGSQWGFGPSHLALPDV 290
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
N V + + + P + + DL + + +
Sbjct: 291 LTANRYVELVLRSSEKVIDPAIMVTERGLISDIDLGASGLTVVRDMESMKPFESR---AR 347
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
+L L+ ++R ++ +D Q+ D + +A E + +GP +G L+++F
Sbjct: 348 FDVSSIQLTDLRSAVRRIYYVDQLQM-KDSPAMTATEVQVRYELMQRLLGPTLGRLENDF 406
Query: 403 IGAMISRELDILDSQGNLPECE-GADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ MI R +I G L E + + + YT PL + Q+ + AS + +
Sbjct: 407 LSPMIQRTFNIRFRAGKLGELPSKLLESGKAAMDIVYTGPLSRAQKIDQAASIERWAGST 466
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
+L +P +D D D + R P L+R A+V IR+ R ++ E+
Sbjct: 467 AQLAE--INPEVLDIPDWDEMVRMLGSLLGAPQTLMRPKAKVTSIRKNRSQTQQKAEQAA 524
Query: 522 LQQQLQQTSQDIGAKAAG 539
+ + + G A
Sbjct: 525 IAEAEGNAMEAQGKGQAA 542
>gi|42526662|ref|NP_971760.1| head-to-tail joining protein, putative [Treponema denticola ATCC
35405]
gi|41816855|gb|AAS11641.1| head-to-tail joining protein, putative [Treponema denticola ATCC
35405]
Length = 560
Score = 312 bits (799), Expect = 9e-83, Method: Composition-based stats.
Identities = 123/531 (23%), Positives = 227/531 (42%), Gaps = 48/531 (9%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFL---------------YPYKNNAQLRMW 46
++ DI+ F+ LK++R +++ ++ P ++ + +
Sbjct: 7 SKELLDDIKGLFDILKDKRSMHEAEWQDVCTYIGSNVFDWSENKEEIKRPKRHTGRPSEY 66
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
KL S L P W L+ + + + V++W +Q
Sbjct: 67 -------LKKLVSGLMGYTISPNVTWLKLSLNNTEMLEY--------AGVKDWLEQSEKA 111
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSV 166
L+ E +R+ + F ++ FG G ++ E IR++++ +Y++
Sbjct: 112 LYE--EFNRNNLYSQVSLFISNAASFGHGVMLIDE-----KKENSIRFLTIAEPEIYIAE 164
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALA--RNENERFTIIHAVYPKSLTD 224
N +D+V+R F+ TV I++++G++ +S ++K+ + +N+ I+HAV P+ D
Sbjct: 165 NEYGDIDTVFRYFSMTVKNIIARFGEENVSEQIKNDAKDIKGKNKEIKILHAVLPRDDYD 224
Query: 225 K-KKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+ K D N F S ++ +D N EE PY V + YG SPA EA+P +R
Sbjct: 225 ESKLDGKNMEFASYYIDMDNNTILEESGYYELPYSVFIWEKETSSAYGGSPAREAIPDMR 284
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
LN+ + +L PP + + P N + P+ G
Sbjct: 285 LLNKVEEARLKLAQLVSEPPMNVPDSMRGFE-SVVPAGYNYYERPDM---IMTPINIGAN 340
Query: 344 LPYH-EELNRLKESIRSLFLLDLFQVLD-DKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
P E + ++ +R F +D +L A ++A E +E EK A + LI Q++
Sbjct: 341 FPITLETIQDIESRLRDKFHVDFMLMLQAQTAQKTATEVIELQGEKSALLSSLIVN-QNK 399
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ R L+I+ QG PE N ++L V++ PL + Q+ +Q +
Sbjct: 400 ALSEIVIRTLNIMYRQGRFPEPPNILNGSDAVLNVDFVGPLAQAQKRYHQTGGVQTSLAI 459
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREV 512
+ +P +D++DTD++ + L P IR+ EVE IRQQR
Sbjct: 460 SQPI-IQMNPEVLDYIDTDKLLKNVLDTNGFPQSAIREDDEVEKIRQQRAE 509
>gi|282848877|ref|ZP_06258267.1| hypothetical protein HMPREF1035_1386 [Veillonella parvula ATCC
17745]
gi|282581382|gb|EFB86775.1| hypothetical protein HMPREF1035_1386 [Veillonella parvula ATCC
17745]
Length = 575
Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats.
Identities = 110/514 (21%), Positives = 201/514 (39%), Gaps = 40/514 (7%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYP----------YKNNAQLRMWDTTGSEACIKL 57
++ +F+ L N + + L + P ++ + E+C
Sbjct: 25 KLRKKFSQLFNAQQRYVNKWKHLRDYQLPFIGQFDGEEDQSEPYNGKILNPVAWESCQIF 84
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
+S + S +TPP +KW L + A + +V E D+ + L+ ++S
Sbjct: 85 ASGVMSGLTPPSRKWFKLTMEN--------IDVAANSQVAELLDEREEILYAV--LAKSN 134
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
F + Y + G + AD E G+R+ S P+ +S N + +V+ R
Sbjct: 135 FYSVVHQVYMELP-MGQAPMGIFAD-----SESGVRFTSYPIGTYAISTNSKEIVNIFGR 188
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNE--NERFTIIHAVYPKSLTDKKKDKGNKGFH 235
++ TVDQIV ++G + +K+ + FT+ V P K + N +
Sbjct: 189 KYKMTVDQIVEQFGYENCPDNIKNIYDNGNSLQQSFTVNWLVEPNKDRKDKLGRRNMPYS 248
Query: 236 SKFVSVDE--NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
S + + +P + R+ YG+ A A P + L + +
Sbjct: 249 SIYWVEGSNSDEVLYHGGFEEWPIPIARHTSMDLNGYGKGAAWFAQPDSQMLQKLEFDYL 308
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
L + PP A S+ +L PG + + +F N ++
Sbjct: 309 TAVELGVKPPMQAPSD-VISTVNLYPGGITEIEGQHKVEPMFAV--QSNLQDIQNKIAVT 365
Query: 354 KESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
++SI+ + DLF +LD E ME+T+EK +GP++ L SEF+ +I R
Sbjct: 366 EDSIKRAYSADLFLMLDQIDKGQMTAREVMERTQEKLQQLGPVVERLLSEFLNPIIERVY 425
Query: 412 DILDSQGNLPECEGAD---NPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
+LD G P E + +K+EY SPL + Q+ S+ + Q ++ L
Sbjct: 426 AVLDRAGVFPPVEDEELLDQLNGQEVKIEYISPLAQAQKMSSLVNIEQYFAFIMSLAQA- 484
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
+P+ ++ + + + PA +IR E
Sbjct: 485 -NPNIVNKFNFEEAANTYGVNLGVPAKIIRSDDE 517
>gi|317120721|gb|ADV02543.1| putative phage-related head-to-tail joining protein [Liberibacter
phage SC2]
gi|317120782|gb|ADV02603.1| putative phage-related head-to-tail joining protein [Candidatus
Liberibacter asiaticus]
Length = 539
Score = 305 bits (782), Expect = 9e-81, Method: Composition-based stats.
Identities = 205/543 (37%), Positives = 297/543 (54%), Gaps = 24/543 (4%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--AQLRMWDTTGSEACIKLSS 59
N+ K + RF LK QR E+ +E+ + PY+ ++WDTT + A KL+S
Sbjct: 14 NKEFIKKLIARFESLKAQRSEIEPIRQEIIDLVCPYRGKASEDKKIWDTTATSASDKLAS 73
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
LL +LITP G +WHGL +F ++ + +RE CD LF RE SGF
Sbjct: 74 LLHNLITPFGSRWHGLVAPDPQSGSFFASQENKL--IREQCDHFVMELFAQRELPASGFN 131
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
CL+ FYT VV FG GCFY+ G+RYISVP+S++ S NH+NVVD+V+ EF
Sbjct: 132 LCLKDFYTEVVLFGMGCFYVSEREG-----GGLRYISVPVSSIVCSANHENVVDTVFEEF 186
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFV 239
+ T + + KWG LS KMK L R++ +++ AV+P D +G+ V
Sbjct: 187 SLTPENVAKKWGYDALSDKMKEDLDRSDPQKYEFFQAVFPDKEDD------YEGYKKVIV 240
Query: 240 SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLS 299
S+DENR EE PYIVGRY +G SP +ALP+IRRLN ++ + +
Sbjct: 241 SIDENRIIEEGYHRVMPYIVGRYEASPSNPFGYSPTHKALPSIRRLNALSASVSLYSEKA 300
Query: 300 LHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL-PYHEELNRLKESIR 358
L+P + + + + F KP +N G + R+GR P G+ P HEE+ RL+ IR
Sbjct: 301 LNPAVLTSEDTRGKTFSTKPKTVNHGWMDRQGRPRAVPFFTGSDARPSHEEMQRLQMQIR 360
Query: 359 SLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQG 418
L+LLDLFQVL D+ASRSA ESMEKT EKG F+ ++GGLQ+EF+G+M+ RE+DIL
Sbjct: 361 ELYLLDLFQVLADRASRSATESMEKTLEKGIFISAIVGGLQAEFVGSMVKREIDILYQDQ 420
Query: 419 NLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMD 478
G LKV YTSPL+KYQ+AE + +QG+ E+ TGDP+ + +
Sbjct: 421 ------GDIRGLGKDLKVSYTSPLYKYQKAEELNGIVQGIRVNAEIASMTGDPTPLMMFN 474
Query: 479 TDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAA 538
+++ + P VL+ + + +++ Q + + L + ++ + GA A
Sbjct: 475 PYLCGKYAADGSGVPEVLVLSEEDTKQKLIEKQKQAEASQMKQLTME--ESIKTGGAIAQ 532
Query: 539 GRA 541
RA
Sbjct: 533 DRA 535
>gi|291334466|gb|ADD94120.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161]
Length = 330
Score = 303 bits (775), Expect = 6e-80, Method: Composition-based stats.
Identities = 84/336 (25%), Positives = 157/336 (46%), Gaps = 29/336 (8%)
Query: 1 MNQR-SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR----------MWDTT 49
M Q AK++ R++ LK+QR +E+ ++ P K + ++D +
Sbjct: 1 MAQTDKAKNLLKRYDRLKSQRQNWESHWQEVADYMQPRKADVTKTRSKGDKRTELIFDGS 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
++ L++ L ++T P W L F ++ + + W + TD ++
Sbjct: 61 PLQSVELLAASLHGMLTNPSTPWFTLR--------FKDEDIDNEDEAKLWLEASTDAMYT 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+RS F + Y ++ FGT ++E D E+ I++ + ++ V+++ N +
Sbjct: 113 --AFNRSNFQQEIFELYHDLITFGTAAMFIEED-----DEDIIKFSTRHINEVFIAENDK 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKD 228
+D+V+R+F+ + ++ K+GD +S + + ++ E I+HAVYP+S D K+D
Sbjct: 166 GRIDTVFRKFSLSARAVMQKFGD--VSINIATKAKKDPYEEVEIMHAVYPRSDFDPRKQD 223
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
K N F S ++ + FP++V RY + EIYGRSPAM ALP ++ LNE
Sbjct: 224 KENMPFESVYLDAESGDELSVSGFREFPFVVPRYLKASHEIYGRSPAMTALPDVKMLNEM 283
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNI 324
+ + + PP + + PG +N
Sbjct: 284 SKTTIKSAQKQVDPPLLVPDDGFMLPVRTIPGGLNF 319
>gi|290968647|ref|ZP_06560185.1| hypothetical protein HMPREF0889_0287 [Megasphaera genomosp. type_1
str. 28L]
gi|290781300|gb|EFD93890.1| hypothetical protein HMPREF0889_0287 [Megasphaera genomosp. type_1
str. 28L]
Length = 577
Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats.
Identities = 106/515 (20%), Positives = 208/515 (40%), Gaps = 40/515 (7%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTTGSEACI 55
+ + L Q+ + +++ + PY +++ ++A
Sbjct: 27 QSCVKMLDSLFKQQQKYIPLWKDIRNYELPYDGELGDDVIGAPAMHDEEIYNGITAQARD 86
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
++ + S +TPP +KW A + ++ + V D+ + + G S+
Sbjct: 87 TFAAGIQSGLTPPSRKWFRFAPTDASLDNNID--------VARVLDERCEIMEGV--LSQ 136
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
S F + S Y + FG + AD E+G+ +++ + + + Q +++
Sbjct: 137 SNFYNVIHSAYKELP-FGQSPVGVFAD------EKGVYFVNYTIGTYALGADGQGRINTF 189
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKS--ALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
R+ + QIVS +GD V++ ++ + +T+ VYP +
Sbjct: 190 ARKVKMSAAQIVSLYGDSVVTDSVREAVKANGGHEDYYTVCWLVYPNPKAKPTGGNHDMK 249
Query: 234 FHSKFVSVDEN--RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
F S + K + V RY V+ + YG PA +ALP R L + +
Sbjct: 250 FLSVHWLEGSDPNSLLAAKGFEEWAIPVARYNVKGIDAYGIGPAWDALPESRMLQKMEYD 309
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
A LS+ PP + Q +L PG + + ++
Sbjct: 310 GAIALELSIKPP-LVGPAELQGRINLFPGAYTPSINPNDNVHSIYSGGL-DLNSLQAKIT 367
Query: 352 RLKESIRSLFLLDLFQVLD--DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
++++ I+ ++ DLF +L+ ++ +A E M + +EK A +GP+I LQ+EF+ +I R
Sbjct: 368 QIEDRIKRIYSTDLFLMLNELNRGQMTAQEVMARNQEKMAQLGPVIERLQNEFLSDIIER 427
Query: 410 ELDILDSQGNLPECEGADNP--PVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
++L+ P +K+EY SPL + Q+ + + QGV+ V +L
Sbjct: 428 VYNLLERNQVFPPLPDDVQQTLQGQEIKIEYLSPLAQAQKMSGLTAIEQGVSFVGQLAQL 487
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
DP+ + ++ D+ L P+ +IR E
Sbjct: 488 --DPNVILRVNFDKAVENYLDKLGVPSTMIRTEDE 520
>gi|46580131|ref|YP_010939.1| hypothetical protein DVU1721 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449547|gb|AAS96198.1| hypothetical protein DVU_1721 [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233876|gb|ADP86730.1| hypothetical protein Deval_1575 [Desulfovibrio vulgaris RCH1]
Length = 550
Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats.
Identities = 101/570 (17%), Positives = 204/570 (35%), Gaps = 45/570 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK------------NNAQLRMWDT 48
M K++ + +++ R +++ +L P + + + +
Sbjct: 1 MRSALLKELSEVAEHVEGLRKRREAQWRDISEWLMPMRGIYEGQDGADVIASRGKGLLNR 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
G+ A ++ ++ +TP W + R W D V ++
Sbjct: 61 EGTRALKVAATGMTGGMTPAALPWFRWSLRDDV--------QNERTGARAWLDTVEASIN 112
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
GF + + + FG + + R+ S + ++++
Sbjct: 113 SV--LRACGFYQAIHACNMEFLAFGPLLLF-----QDNSQGALCRFESCTVGTWAVALDA 165
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALA-RNENERFTIIHAVYPKSLT-DKK 226
+D+V R T Q+ ++G L+ L +ER ++H V P++ +
Sbjct: 166 DGGLDTVVRRLKLTARQMEQRFGRDRLTPATVKLLETNKGHERVEVVHVVRPRTERQHGR 225
Query: 227 KDKGNKGFHSKFVSVDE-NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
D N F S + E PY Y ++YG +P + LP +++L
Sbjct: 226 IDARNMPFASYMYEATGADDVLSESGYHEMPYFFAAYD-DTLDLYGSAPGDDCLPDVKQL 284
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN--P 343
E + + ++PPT + ++ ++ PG N A+S P+
Sbjct: 285 QELEKQKLVGLQKVINPPTRKPAS-FKQRLNVNPGGEN--AVSGGDPHGIGPLYEVRIDL 341
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLD---DKASRSAAESMEKTREKGAFVGPLIGGLQS 400
EE+ + + IR + F + + E +E+ RE+ +GP + ++
Sbjct: 342 NQVREEIATVVDRIRQTTMASYFADMPLELRPKDMTYGEYLERKRERLQLMGPSLEAYEA 401
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
+ + +I R +LD G LP A V+++ + Y SPL + + S +
Sbjct: 402 KVLTPVIFRTFALLDRAGMLPPPPDAL-GEVAVVDISYISPLAQALRQTGAESTRALLMD 460
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
V++L DP +D +D D+ P ++R +V +RQQR+ + +
Sbjct: 461 VMQLAEA--DPGVLDKVDMDQAVDELAKGIGAPGRVVRSDEDVAAMRQQRDEAKAREAQA 518
Query: 521 HLQQQLQQTSQDIGAKAAGRAMEKKLTHDM 550
Q + G L HD+
Sbjct: 519 QEAITAMQGLAKVAGTRTGPG---TLAHDL 545
>gi|26989003|ref|NP_744428.1| head-to-tail joining protein [Pseudomonas putida KT2440]
gi|24983824|gb|AAN67892.1|AE016421_4 head-to-tail joining protein [Pseudomonas putida KT2440]
Length = 524
Score = 296 bits (758), Expect = 6e-78, Method: Composition-based stats.
Identities = 72/541 (13%), Positives = 157/541 (29%), Gaps = 43/541 (7%)
Query: 11 DRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLS 62
+ L R + + + P W + L + L
Sbjct: 15 SLYAKLAPDRETFLQRARDCSKYSIPTLIPPAGHASGTKFYTPWQAVAARGVNNLGAKLL 74
Query: 63 SLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCL 122
+ PP + L + L V+ ++ + E +
Sbjct: 75 MALLPPNSPFFRLEI-DEFTEEKLTSNPQMHADVQAGLAKIERAVQT--EIETTAIRVTG 131
Query: 123 QSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFT 182
++ G G Y+ + G+++ PL + + V + + +
Sbjct: 132 FELLKHLIVGGNGLVYL-------PQQGGMKF--YPLDRYVVRRDPMGNVLDIVVKEEVS 182
Query: 183 VDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVD 242
+ + + V R+ N+ +I + K T + +
Sbjct: 183 LAVLPEEARSLVEPGDDSGDTPRDHNKNVSIYTHITLKGET--------WNVYQEVKGQI 234
Query: 243 ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
++ R+ E YGRS E L I+ L + + S
Sbjct: 235 VPGSRGTYPKDKCAWLPIRFVKIDGENYGRSYVEEYLGDIKSLEGLSQAIVEGSAASAKV 294
Query: 303 PTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + +L Q + G+ E +N + E + F
Sbjct: 295 LFLVNPNGVTSSSELAEAPNGEFVDGVASDVQALQLQKSGDFRVALETINTITERLEFAF 354
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+L+ + + +A E E A +G + L EF +++R + + + LP
Sbjct: 355 MLN-SAIQRNGERVTAEEIRYMAGELEAALGGVYSILSQEFQLPLVNRIMFSMQRRKKLP 413
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
E P + +E L + + Q ++T++++ P ++
Sbjct: 414 ELPKGTVSPTIVTGME---ALGRG---NDLTKLDQFISTIMQI------PDAASRINWGN 461
Query: 482 VSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
A L++ EV+ +QQ+++Q+ + Q + G +
Sbjct: 462 YMTRRATALGIDTDGLVKTDQEVQQEQQQQQMQQAMQSGVAPAVQAAGRMMEKGQPDGSQ 521
Query: 541 A 541
A
Sbjct: 522 A 522
>gi|209966578|ref|YP_002299493.1| hypothetical protein RC1_3320 [Rhodospirillum centenum SW]
gi|209960044|gb|ACJ00681.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 521
Score = 296 bits (757), Expect = 8e-78, Method: Composition-based stats.
Identities = 112/487 (22%), Positives = 195/487 (40%), Gaps = 42/487 (8%)
Query: 23 LNYWMEELTGFLYPYKNNAQLR----------MWDTTGSEACIKLSSLLSSLITPPGQKW 72
++ + P ++D T ++A +L++ L + +TPP +W
Sbjct: 39 WEPLWQDCYDHVLPQNARFTRDAGPGERRGELLFDGTAADAADQLAASLLAQLTPPWSRW 98
Query: 73 HGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEF 132
GLA A V ++ + L RS F + VV
Sbjct: 99 AGLAPGP-------DLSAAERALVAPLLERASADLQAH--LDRSNFAVEAHQAFLDVVTG 149
Query: 133 GTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGD 192
GTGC +E G +R+ +VPL+++ + + +D+V+R T T+ Q+ +++G
Sbjct: 150 GTGCLLVEEAP--PGAPSALRFTAVPLADLVLEEGAEGRLDTVFRRLTPTLAQLAARFGT 207
Query: 193 KVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQI 252
L ++ A + + R ++ AV P D + D E +
Sbjct: 208 DALPGALRRRAAADPDARAAVVEAVLP----DPGGGACRWAVA---LEDDPPVLLAEGRF 260
Query: 253 ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQ 312
A P+I R+ E+YGRSP M+ALP IR N+ V + + +++ A +
Sbjct: 261 AEPPFIAFRWMKAPGEVYGRSPVMKALPDIRTANKVVELVLKNASVAVTGIWQADDDGVL 320
Query: 313 RN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLD 370
L PG + A+ G + G L+ L+ IR L D +
Sbjct: 321 NPGTIRLVPGAIIPKAVGSAGLTPL--ASPGRFDVSQLVLDDLRAHIRHALLADRLGPVQ 378
Query: 371 DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPP 430
+A E +E++ E +G G LQSE + ++ R L +L +G +P+
Sbjct: 379 -GPRMTATEVLERSAEMARMLGATYGRLQSELLVPLVRRCLSLLRRRGAVPDLAAD---- 433
Query: 431 VSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWAT 490
L+ V+ SPL + QQ + L+ + +V LG + M +D + +RF A
Sbjct: 434 GRLVAVQILSPLARAQQRRDAEAVLRWLESVTGLG-----DAAMRAVDLEACARFLADAA 488
Query: 491 NTPAVLI 497
PA L+
Sbjct: 489 GVPAALL 495
>gi|9634032|ref|NP_052106.1| head-to-tail joining protein [Yersinia phage phiYeO3-12]
gi|6599023|emb|CAB63627.1| head-to-tail joining protein [Yersinia phage phiYeO3-12]
Length = 535
Score = 292 bits (748), Expect = 8e-77, Method: Composition-based stats.
Identities = 75/528 (14%), Positives = 145/528 (27%), Gaps = 45/528 (8%)
Query: 1 MNQRSAKDI-----QDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWD 47
M + + ++ L N R E + P ++ W
Sbjct: 1 MADSKRTGLGEDGAKATYDRLTNDRRAYETRAENCAQYTIPSLFPKESDNESTDYTTPWQ 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
G+ L+S L + P W L S + + D KV E V +
Sbjct: 61 AVGARGLNNLASKLMLALFPMQS-WMKLTISEYEAKQLVGDPDG-LAKVDEGLSMVERII 118
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
+ E + + L ++ G Y+ + R LS+ + +
Sbjct: 119 MNYIESN--SYRVTLFECLKQLIVAGNALLYLPEPEGSYNPMKLYR-----LSSYVVQRD 171
Query: 168 HQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK 227
V + + V S+ K+ + +E + VY +
Sbjct: 172 AYGNVLQIVTRDQIAFGA----LPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEESGDYL 227
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
V+ + PYI R E YGRS E L +R L
Sbjct: 228 KYEE------VEDVEIDGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLEN 281
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPY 346
+ + +S + + L + RE Q + +
Sbjct: 282 LQEAIVKMSMISAKVIGLVNPAGITQPRRLTKAQTGDFVPGRREDIDFLQLEKQADFTVA 341
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
++++ + F+L V +A E E +G + L E +
Sbjct: 342 KAVSDQIEARLSYAFML-NSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPL 400
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ L L + +PE P +E + + + + ++ L
Sbjct: 401 VRVLLKQLQATSQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCISAWAALAP 454
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQ 513
GDP ++ + A ++ + + + Q Q
Sbjct: 455 MQGDPD----INLAVIKLRIANAIGIDTSGILLTDEQKQALMMQDAAQ 498
>gi|189427230|ref|YP_001949780.1| gp8 [Salmonella phage phiSG-JL2]
gi|189085883|gb|ACD75698.1| gp8 [Salmonella phage phiSG-JL2]
Length = 535
Score = 292 bits (748), Expect = 8e-77, Method: Composition-based stats.
Identities = 76/528 (14%), Positives = 146/528 (27%), Gaps = 45/528 (8%)
Query: 1 MNQRSAKDI-----QDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWD 47
M + + ++ L N R E + P ++ W
Sbjct: 1 MADSKRTGLGEDGAKATYDRLTNDRRAYETRAENCAQYTIPSLFPKESDNESTDYTTPWQ 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
G+ L+S L + P W L S + + D KV E V +
Sbjct: 61 AVGARGLNNLASKLMLALFPMQS-WMKLTISEYEAKQLVGDPDG-LAKVDEGLSMVERII 118
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
+ E + + L ++ G Y+ + R LS+ + +
Sbjct: 119 MNYIESN--SYRVTLFECLKQLIVAGNALLYLPEPEGSYNPMKLYR-----LSSYVVQRD 171
Query: 168 HQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK 227
V + + V S+ K+ + +E + VY +
Sbjct: 172 AYGNVLQIVTRDQIAFGA----LPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEESGDYL 227
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
V+ + PYI R E YGRS E L +R L
Sbjct: 228 KYEE------VEDVEIDGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLEN 281
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPY 346
+ + +S + + L + RE Q + +
Sbjct: 282 LQEAIVKMSMISAKVIGLVNPAGITQPRRLTKAQTGDFVPGRREDIDFLQLEKQADFTVA 341
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
++++ + F+L F V +A E E +G + L E +
Sbjct: 342 KAVSDQIEARLSYAFML-NFAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPL 400
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ L L + +PE P +E + + + + ++ L
Sbjct: 401 VRVLLKQLQATSQIPELPKEAGEPTISTGLEAIG------RGQDLDKLERCISAWAALAP 454
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQ 513
GDP ++ + A ++ + + + Q Q
Sbjct: 455 MQGDPD----INLAVIKLRIANAIGIDTSGILLTDEQKQALMMQDAAQ 498
>gi|292670769|ref|ZP_06604195.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647390|gb|EFF65362.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 567
Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats.
Identities = 98/510 (19%), Positives = 190/510 (37%), Gaps = 40/510 (7%)
Query: 15 YLKNQRGELNYWMEELTGFLYPYKNNAQLR------------MWDTTGSEACIKLSSLLS 62
+ +R + ++L+ ++ P + + D EA K ++ L
Sbjct: 27 QMMTERTQFESTWKQLSKYINPTRGRFDDEDKTQDGRRRDYFLLDPYPMEASGKCAAGLH 86
Query: 63 SLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCL 122
S +T P + W L + V+ W ++ D L G ++S L
Sbjct: 87 SGLTSPSRPWFALGLQDKELAEY--------HTVKLWLEECQDVLMGI--YAKSNIYNML 136
Query: 123 QSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFT 182
+ + +FGTG + D + G+ +V+ + V R+F
Sbjct: 137 LNIEAELTQFGTGAALLLEDFN-----TGVWARPYTCGEYAGNVDARGRVVQFARKFKLN 191
Query: 183 VDQIVSKWGDKVLSSKMKSAL-ARNENERFTIIHAVYPKSLTDKKKDK--GNKGFHSKFV 239
Q+V ++G+ V+S +++A A+N + F + + + + + K F
Sbjct: 192 AWQMVDEFGEDVVSDAVRNAYRAKNLKDYFPVTMLIEKNADYNPDSNALLNFKYKSYYFE 251
Query: 240 SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLS 299
+ F + P+++ R+ V A+ IYG P AL +L + +
Sbjct: 252 DSQTDVFLKVSGYHEVPFLMPRWTVIANGIYGVGPGHNALGNCMQLQKIEKINMRLLEHR 311
Query: 300 LHPPTIAVSEAKQRNFDLKPG--YMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
P I S + PG + ++ R L++ G+ + + ++ I
Sbjct: 312 SDPALIVPSS--VGKVNRLPGKETLVPDSMINGIRPLYEA--TGDRGEVMQTIQYKQQQI 367
Query: 358 RSLFLLDLFQVL--DDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILD 415
+ F DLF +L D +A E E+ EK + P++ + +E + + R +I
Sbjct: 368 GAAFYNDLFVMLAQQDNPQMTAREVAERHEEKLLMLSPVLEQMHNEVLAPLTRRAFEICY 427
Query: 416 SQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD 475
G LP +K E+ S L + Q+A + + + L P MD
Sbjct: 428 RNGLLPPLPEELRGQEGSIKAEFISLLAQAQKAVGTNAMEKTLAIAGNL--MGASPEIMD 485
Query: 476 HMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
++D D R + TP ++RD +V+
Sbjct: 486 NLDLDAAIREHAQMSGTPETIMRDEQDVQK 515
>gi|17570823|ref|NP_523332.1| head-to-tail joining protein [Enterobacteria phage T3]
gi|138413|sp|P20323|VHTJ_BPT3 RecName: Full=Head-to-tail joining protein
gi|15714|emb|CAA35152.1| 8 [Enterobacteria phage T3]
gi|17384307|emb|CAC86295.1| head-to-tail joining protein [Enterobacteria phage T3]
Length = 535
Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 76/528 (14%), Positives = 147/528 (27%), Gaps = 45/528 (8%)
Query: 1 MNQRSAKDI-----QDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWD 47
M + + ++ L N R E + P ++ W
Sbjct: 1 MADSKRTGLGEDGAKATYDRLTNDRRAYETRAENCAQYTIPSLFPKESDNESTDYTTPWQ 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
G+ L+S L + P W L S + + D KV E V +
Sbjct: 61 AVGARGLNNLASKLMLALFPMQS-WMKLTISEYEAKQLVGDPDG-LAKVDEGLSMVERII 118
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
+ E + + L ++ G Y+ + R LS+ + +
Sbjct: 119 MNYIESN--SYRVTLFECLKQLIVAGNALLYLPEPEGSYNPMKLYR-----LSSYVVQRD 171
Query: 168 HQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK 227
V + + V S+ KS + +E + VY +
Sbjct: 172 AYGNVLQIVTRDQIAFGA----LPEDVRSAVEKSGGEKKMDEMVDVYTHVYLDEESGDYL 227
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
+ V+ + PYI R E YGRS E L +R L
Sbjct: 228 KYE------EVEDVEIDGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLEN 281
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPY 346
+ + +S + + L + RE Q + +
Sbjct: 282 LQEAIVKMSMISAKVIGLVNPAGITQPRRLTKAQTGDFVPGRREDIDFLQLEKQADFTVA 341
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
++++ + F+L+ V +A E E +G + L E +
Sbjct: 342 KAVSDQIEARLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPL 400
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ L L + +PE P +E + + + + ++ L
Sbjct: 401 VRVLLKQLQATSQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCISAWAALAP 454
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQ 513
GDP ++ + A ++ + + + Q Q
Sbjct: 455 MQGDPD----INLAVIKLRIANAIGIDTSGILLTDEQKQALMMQDAAQ 498
>gi|194100448|ref|YP_002003821.1| gp8 [Klebsiella phage K11]
gi|193201387|gb|ACF15865.1| gp8 [Klebsiella phage K11]
Length = 535
Score = 290 bits (741), Expect = 6e-76, Method: Composition-based stats.
Identities = 81/564 (14%), Positives = 154/564 (27%), Gaps = 52/564 (9%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEA 53
+ AK + ++ LKN R E + P + W + G+
Sbjct: 10 AEEGAKAV---YDRLKNDRQPYETRAESCAQYTIPSLFPKDSDNASTDYTTPWQSVGARG 66
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L+S L + P W L S + L + KV E V + + E
Sbjct: 67 LNNLASKLMLALFPMQS-WMKLTISEYEAKNLLG-DAEGLAKVDEGLSMVERIIMNYIES 124
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+ + L + G Y+ L++ + + V
Sbjct: 125 N--SYRVTLFECLKQLCVAGNALLYLPEPEGYTP------MKLYRLNSYVVQRDAFGNVL 176
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+ + + V S + + E+ + VY D
Sbjct: 177 QIVTLDKIAFNA----LPEDVRSQVEAAQGEQKEDAEVDVYTHVYLNESGDGYSKYE--- 229
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ E + PYI R E YGRS E L ++ L +
Sbjct: 230 ---EVAEAVVPGSEAEYPLEECPYIPVRMVRIDGESYGRSYVEEYLGDLKSLENLQESIV 286
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGY-MNIGALSREGRSLFQPVQFGNPLPYHEELNR 352
+ ++ + + L ++ Q + G+ +
Sbjct: 287 KMAMITAKVIGLVDPAGITQVRRLTAAQSGAFVPGRKQDIEFLQLEKSGDFTVAKNVSDT 346
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
++ + F+L V +A E E +G + L E ++ L
Sbjct: 347 IEARLSYAFML-NSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLLK 405
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
L + +PE P +E + + + + + L GD
Sbjct: 406 QLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCIAAWSALKALEGD-- 457
Query: 473 CMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQD 532
D ++ + A + +E + +M +Q Q QQ +
Sbjct: 458 --DDLNLANLKLRIANAIGLDT---------AGMLLTQEQKNALMAQQGAQIATQQGAAA 506
Query: 533 IGAKAAGRAMEKKLTHDMMENSYG 556
+G A +A +S G
Sbjct: 507 LGQGMAAQATASPEAMAAAADSVG 530
>gi|119637774|ref|YP_919010.1| Head-to-tail joining protein [Yersinia phage Berlin]
gi|194100496|ref|YP_002003341.1| gp8 [Yersinia phage Yepe2]
gi|119391805|emb|CAJ70678.1| hypothetical protein [Yersinia phage Berlin]
gi|193201229|gb|ACF15710.1| gp8 [Yersinia phage Yepe2]
Length = 535
Score = 289 bits (738), Expect = 1e-75, Method: Composition-based stats.
Identities = 81/526 (15%), Positives = 154/526 (29%), Gaps = 44/526 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEA 53
+ AK + ++ LKN R E + P + W G+
Sbjct: 11 AENGAKAV---YDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARG 67
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L+S L + P W L S + + + A KV E V L + E
Sbjct: 68 LNNLASKLMLALFPMQT-WMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIES 125
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+ + L +V G Y+ + R LS+ + + V
Sbjct: 126 N--SYRVTLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFGTVL 178
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+ + K L +++++ ++ + + VY D++ + K
Sbjct: 179 QIVT---------LDKTAYAALPEDVRNSMDSSQEHKGDEMIDVYTHIYLDEESGEYLKY 229
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ V+ + PYI R E YGRS E L +R L +
Sbjct: 230 --EEIDGVEVEGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIV 287
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELNR 352
+ +S + + L + + E S Q + + +
Sbjct: 288 KMSMISAKVIGLVNPAGITQVRRLTKAQTGDFVSGRPEDISFLQLEKAADFSVARAVSEQ 347
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
++ + F+L V +A E E +G + L E M+ L
Sbjct: 348 IEGRLSYAFML-NSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLLK 406
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
L + +PE P +E L + Q + + + L GDP
Sbjct: 407 QLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCIAAWSALAPMQGDPD 460
Query: 473 CMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVM 517
++ + A +++ E + + +
Sbjct: 461 ----INIATIKLRIANAIGIDTSGILKTPEEKQQEMAEAAQGTAMQ 502
>gi|260557979|ref|ZP_05830191.1| Bbp21 [Acinetobacter baumannii ATCC 19606]
gi|260408489|gb|EEX01795.1| Bbp21 [Acinetobacter baumannii ATCC 19606]
Length = 555
Score = 288 bits (737), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/521 (18%), Positives = 199/521 (38%), Gaps = 33/521 (6%)
Query: 9 IQDRFNYLKNQR-GELNYWMEELTGFLYP---------YKNNAQ--LRMWDTTGSEACIK 56
++ RF+ + R +++ + EL + P K++ ++ D TG ++
Sbjct: 1 MKKRFDAVWQLRVNDMDDYCAELALHVLPAAIKTIKNQEKHDRSAWSKIVDNTGKDSLKT 60
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L++ + S P +KW L + + Q +VR+W V D + S+S
Sbjct: 61 LAAGMVSGTCSPSRKWFTLQAADESLQK--------DIEVRQWLKAVEDACY--VAFSKS 110
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
+ Y FG G + + + + I + ++ + N + VY
Sbjct: 111 NVYRTVHHIYMQEGAFGIGA-ALAPEHGRNSKAQLMDLIPLTFGEFAITTDEFNKPNGVY 169
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTDKKKDKGNKGFH 235
R+F T +V +G +S +K+A E F + HA+Y + N F
Sbjct: 170 RKFKLTSINMVKYFGLDNVSDAIKNAFENKNYEQEFEVCHAIYERVDAKGY-GPKNMPFA 228
Query: 236 SKFVS-VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQ 294
S + ++ E + F I GR+ V + ++YG PA + + +R L + ++A
Sbjct: 229 SIYYEPSSSDKLLRESGLMGFQVICGRWTVSSSDVYGEGPASDCIGDLRALQKGHQQIAV 288
Query: 295 FGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL- 353
+ PP + K + P + S + + + ++
Sbjct: 289 GVDYQVRPPLLLPDYLKGHERETLPNGIAFYQASPTSQVAQVQAMLNVQFDLNGVMAQIA 348
Query: 354 --KESIRSLFLLDLFQVLD--DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
+E ++ F DLF +LD DK +A E E+ EK +GP++ E + ++
Sbjct: 349 QCQERVKRAFHTDLFMMLDAFDKGKMTATEVYERKSEKMLMLGPVVERQIDELLRPLVEI 408
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
++ + + + + +++ + S L Q++ A + + + ++
Sbjct: 409 CVERVLANSEYLRQIAPEAIQNADVEINFVSILALAQKSSGSAILERALAMIGQVAQV-- 466
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
DP +D +DTD+ + R V+ IR R
Sbjct: 467 DPQVLDKVDTDKFMDEYAEINGVSPDIFRPQRIVDQIRSDR 507
>gi|212671411|ref|YP_002308410.1| head-to-tail joining protein [Kluyvera phage Kvp1]
gi|211997255|gb|ACJ14572.1| head-to-tail joining protein [Kluyvera phage Kvp1]
Length = 535
Score = 286 bits (732), Expect = 6e-75, Method: Composition-based stats.
Identities = 79/522 (15%), Positives = 145/522 (27%), Gaps = 46/522 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEA 53
+ AK + ++ LKN R E + P + W G+
Sbjct: 11 AENGAKAV---YDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARG 67
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L+S L + P W L S + + + A KV E V L + E
Sbjct: 68 LNNLASKLMLALFPMQT-WMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIES 125
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+ + L +V G Y+ + R LS+ + + V
Sbjct: 126 N--SYRVTLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFGTVL 178
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+ + K L ++++L + + VY D++ + K
Sbjct: 179 QIVT---------LDKTAYAALPEDVRNSLDSGTEHKGDEMIDVYTHIYLDEESGEYLKY 229
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ V+ + + PYI R E YGRS E L +R L +
Sbjct: 230 --EEIDGVEVDGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIV 287
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
+ +S + + L G +Q +
Sbjct: 288 KMSMISAKVIGLVNPAGITQVRRLTKAQT--GDFVSGRPEDISFLQLEKAADFSVAKAVS 345
Query: 354 KESIRSLFLLDLFQ--VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
++ L + V +A E E +G + L E M+ L
Sbjct: 346 EQIEGRLSYAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E L + Q + + + L DP
Sbjct: 406 KQLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCIAAWSALAPMQNDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREV 512
++ + A +++ E + +
Sbjct: 460 D----INIATIKLRIANAIGIDTSGILKTPEEKQQEMAEAAQ 497
>gi|312436374|gb|ADQ83183.1| head to tail joining protein [Yersinia phage Yep-phi]
Length = 535
Score = 286 bits (731), Expect = 7e-75, Method: Composition-based stats.
Identities = 81/526 (15%), Positives = 155/526 (29%), Gaps = 44/526 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEA 53
+ AK + ++ LKN R E + P + W G+
Sbjct: 11 AENGAKAV---YDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARG 67
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L+S L + P W L S + + + A KV E V L + E
Sbjct: 68 LNNLASKLMLALFPMQT-WMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIES 125
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+ + L +V G Y+ + R LS+ + + V
Sbjct: 126 N--SYRVTLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFGTVL 178
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+ + K L +++++ ++ + + VY D++ + K
Sbjct: 179 QIVT---------LDKTAYAALPEDVRNSMDSSQEHKGDEMIDVYTHIYLDEESGEYLKY 229
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ V+ + PYI R E YGRS E L +R L +
Sbjct: 230 --EEIDGVEVEGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIV 287
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELNR 352
+ +S + + L + + E S Q + + +
Sbjct: 288 KMSMISAKVIGLVNPAGITQVRRLTKAQTGDFVSGRPEDISFLQLEKAADFSVARAVSEQ 347
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
++ + F+L V +A E E +G + L E M+ L
Sbjct: 348 IEGRLSYAFML-NSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLLK 406
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
L + +PE P +E L + Q + + ++ L GDP
Sbjct: 407 QLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCISAWSALAPMQGDPD 460
Query: 473 CMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVM 517
++ + A +++ E + + +
Sbjct: 461 ----INIATIKLRIANAIGIDTSGILKTPEEKQQEMAEAAQGTAMQ 502
>gi|119386466|ref|YP_917521.1| putative head-tail connector protein [Paracoccus denitrificans
PD1222]
gi|119377061|gb|ABL71825.1| putative head-tail connector protein [Paracoccus denitrificans
PD1222]
Length = 558
Score = 286 bits (731), Expect = 8e-75, Method: Composition-based stats.
Identities = 108/565 (19%), Positives = 203/565 (35%), Gaps = 41/565 (7%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTTG 50
NQ+ K + R + + EL + P + R+ D T
Sbjct: 6 NQQLRKTLDYRRQAMNQEFDYWQGHFRELRDAIQPTRGRFEASERRSDSSINKRILDNTA 65
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
A L + L S +T P + W L S +V++W +V ++
Sbjct: 66 QMALRTLRAGLMSGVTSPSRPWFRLGLRGSTADE-------AEFEVKDWLHEVQRRMYEV 118
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
S L + Y + +GT + D E+ +R ++ + + +
Sbjct: 119 M--RGSNIYRMLDTTYGDLGLYGTAANLVVPDF-----EDVVRGHNLQVGRFRLGEDGNG 171
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALA-RNENERFTIIHAVYPKSLTDKKKDK 229
V ++YRE V IV WG +S ++ A + FTI H + ++ D K +
Sbjct: 172 RVIALYRELKMPVRGIVETWGLDAVSQSVRRAWDTGEYYQTFTICHMIDKRADGDPKAMQ 231
Query: 230 GN-KGFHSKFVSVD--ENRFFEEKQIATFPYIVGRYRVRADEIY-GRSPAMEALPTIRRL 285
+ + + S + +D +F + P + R+ E + SP M AL R L
Sbjct: 232 SSGRPWASIYWEMDAPSGQFLQIGGHRVKPLLAPRWEQVEGEAWSASSPGMVALGDARSL 291
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP-- 343
+ + A + +PP I + F PG A +P P
Sbjct: 292 QVSQEQKAIAIQKMHNPPLIGGAVQGGMFFKNVPGGFTAMATQDLSTGGIRPAYEVRPDI 351
Query: 344 LPYHEELNRLKESIRSLFLLDLFQV----LDDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
++ + + F DLFQ+ LD ++ +A E E+ EK +GP++ L
Sbjct: 352 QGLIIDIQESQRRVEVAFYKDLFQMTALALDGRSQITAREIAERHEEKLMALGPVLESLD 411
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
E + +I + LPE +KVEY S L + Q+A + + + +
Sbjct: 412 HELLQPLIEATFAYMQEADILPEAPEGIVGNP--IKVEYISLLAQAQKAIGIGAIERTIG 469
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
L P +D +D +++ R P ++ E+ ++R+ + +
Sbjct: 470 FAGTLA--QIKPDVIDMIDGEQMMREFADQVGGPPGILLSPDELREVREAKARAAAQAQA 527
Query: 520 QHLQQQLQQTSQDIGAKAAGRAMEK 544
+ + + + ++A M+
Sbjct: 528 IEAAEPMAG-AAKLISEATLNGMDA 551
>gi|187736539|ref|YP_001878651.1| hypothetical protein Amuc_2060 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426591|gb|ACD05870.1| hypothetical protein Amuc_2060 [Akkermansia muciniphila ATCC
BAA-835]
Length = 544
Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 119/547 (21%), Positives = 214/547 (39%), Gaps = 52/547 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA-----------QLRMWDTT 49
M +R+A+ + + L QR W + L ++ P + N RM DTT
Sbjct: 1 MEERTAE-LNSVYKSLAAQRAPWETWWDRLRDYVLPRRLNREGEVSLPNRDAMDRMTDTT 59
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
EAC KL+S S ITP W + +D + W +Q ++
Sbjct: 60 AVEACQKLASGHMSYITPSHDVWFK----------WSAPDDRGGDEAEAWYNQCSEI--A 107
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+E S S F + + V GTG + D + + + ++P + N +
Sbjct: 108 LKELSVSNFYTEIHECFLDRVALGTGSLFTGTSSDGR-----LLFTNIPCGQFACAENAE 162
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF---TIIHAVYPKSLTDKK 226
VD+ REFT+T Q S +G K L K + L R N +H V P++ ++
Sbjct: 163 GRVDTYVREFTYTAHQARSMFGVKALGPKAREVLERGGNPYATTLRFLHVVRPRTRRSRR 222
Query: 227 -KDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
+ + F S ++S+D+ EE FPY+V R+ YG +P P I+++
Sbjct: 223 REQASHMPFESVYLSLDDQVIVEEGGYMEFPYLVTRFLKWGSGPYGLAPGRLVFPAIQQV 282
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
L G ++ P + + DL+ G + L +
Sbjct: 283 QFLNRILDTLGEVAAFPRIL-ELANQIGEVDLRAGGRTVITPEAASLHLPREWATQGKYD 341
Query: 346 YHEE-LNRLKESIRSLFLLDLFQVLDD-KASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
+ L + +++IR + L + ++ + + +A E M + E+ P S+ +
Sbjct: 342 VGMDRLAQKQDAIRRAYYLPMLELWSGHRGNMTATEVMARENERVLMFSPSFTLFVSD-L 400
Query: 404 GAMISRELDILDSQGNLPECE-------GADNPPVSLLKVEYTSPLF---KYQQAESVAS 453
+ ++R +L G P + V +V Y S + + Q+E +
Sbjct: 401 YSTMTRIFSLLFRMGKFPRPPRAVLRVGRDGSVAVGEPRVVYQSKIALVLRRLQSEGMDR 460
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQ 513
+LQ +N +++ P DH+D D R S P ++R A+V +R++RE
Sbjct: 461 SLQRLNMMMQAA-----PDLADHVDWDHCFRLSARVDGAPESMLRPWADVRAMRKEREDL 515
Query: 514 RRVMEEQ 520
++
Sbjct: 516 QQGASLA 522
>gi|194100286|ref|YP_002003484.1| gp8 [Enterobacteria phage BA14]
gi|193201281|gb|ACF15761.1| gp8 [Enterobacteria phage BA14]
Length = 535
Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats.
Identities = 78/522 (14%), Positives = 145/522 (27%), Gaps = 46/522 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEA 53
+ AK + ++ LKN R E + P + W G+
Sbjct: 11 AENGAKAV---YDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARG 67
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L+S L + P W L S + + + A KV E V L + E
Sbjct: 68 LNNLASKLMLALFPMQT-WMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIES 125
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+ + L +V G Y+ + R LS+ + + V
Sbjct: 126 N--SYRVTLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFGTVL 178
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+ + K L +++++ + + + VY D++ + K
Sbjct: 179 QIVT---------LDKTAYAALPEDVRNSMDSGQEHKGDEMIDVYTHIYLDEESGEYLKY 229
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ V+ + PYI R E YGRS E L +R L +
Sbjct: 230 --EEIDGVEVEGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIV 287
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
+ +S + + L G +Q +
Sbjct: 288 KMSMISAKVIGLVNPAGITQVRRLTKAQT--GDFVSGRPEDISFLQLEKAADFSVAKAVS 345
Query: 354 KESIRSLFLLDLFQ--VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
++ L + V +A E E +G + L E M+ L
Sbjct: 346 EQIEGRLSYAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E L + Q + + + L DP
Sbjct: 406 KQLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCIAAWSALAPMQNDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREV 512
++ + A +++ E + +
Sbjct: 460 D----INIATIKLRIANAIGIDTSGILKTPEEKQQEMAESAQ 497
>gi|326536132|ref|YP_004300566.1| gp8 [Enterobacteria phage 285P]
gi|256861521|gb|ACV32477.1| gp8 [Enterobacteria phage 285P]
Length = 535
Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats.
Identities = 78/522 (14%), Positives = 146/522 (27%), Gaps = 46/522 (8%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEA 53
+ AK + ++ LKN R E + P + W G+
Sbjct: 11 AENGAKAV---YDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARG 67
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L+S L + P W L S + + + A KV E V L + E
Sbjct: 68 LNNLASKLMLALFPMQT-WMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIES 125
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+ + L +V G Y+ + R LS+ + + V
Sbjct: 126 N--SYRVTLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFGTVL 178
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+ + K L +++++ + + + VY D++ + K
Sbjct: 179 QIVT---------LDKTAYAALPEDVRNSMDSGQEHKGDEMIDVYTHIYLDEESGEYLKY 229
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ V+ + + PYI R E YGRS E L +R L +
Sbjct: 230 --EEIDGVEVDGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIV 287
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
+ +S + + L G +Q +
Sbjct: 288 KMSMISAKVIGLVNPAGITQVRRLTKAQT--GDFVSGRPEDISFLQLEKAADFSVAKAVS 345
Query: 354 KESIRSLFLLDLFQ--VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
++ L + V +A E E +G + L E M+ L
Sbjct: 346 EQIEGRLSYAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E L + Q + + + L DP
Sbjct: 406 KQLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCIAAWSALAPMQNDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREV 512
++ + A +++ E + +
Sbjct: 460 D----INIATIKLRIANAIGIDTSGILKTPEEKQQEMAEAAQ 497
>gi|326633070|ref|YP_004306681.1| predicted head to tail joining protein [Salmonella phage Vi06]
gi|301170543|emb|CBV65231.1| predicted head to tail joining protein [Salmonella phage Vi06]
Length = 536
Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats.
Identities = 80/567 (14%), Positives = 151/567 (26%), Gaps = 54/567 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSE 52
+ + AK + + LKN R + + P + W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYTTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P W L S + L D KV E V + + E
Sbjct: 65 GLNNLASKLMLALFPMQT-WMRLTISEYEAKQLLSDPDG-LAKVDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+ + L +V G Y+ LS+ + + V
Sbjct: 123 SN--SYRVTLFEALKQLVVAGNVLLYLPEPDGSNYNP----MKLYRLSSYVVQRDAFGNV 176
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK 232
+ + V + + +E + +Y + +
Sbjct: 177 LQMVTRDQIAFGA----LPEDVRKAVEGQGGDKKPDEVIDVYTHIYLDEESGEYLRYEE- 231
Query: 233 GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
++ PYI R E YGRS E L +R L +
Sbjct: 232 -----AEGMEVQGSDGSYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE--- 349
+ +S + + L G +Q +
Sbjct: 287 VKMSMISSKVIGLVNPAGITQPRRLTKAQT--GDFVTGRPEDISFLQLEKQADFTVAKSV 344
Query: 350 LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
+ ++ + F+L+ V +A E E +G + L E ++
Sbjct: 345 SDAIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRV 403
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
L L + +PE P +E + + + + V +
Sbjct: 404 LLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVAAWAAMAPMRD 457
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQT 529
DP ++ + A I T E +++ M +Q +Q +
Sbjct: 458 DPD----INLAMIKLRIANAIGIDTSGILLTEE---------QRQQKMAQQSMQLGMDSG 504
Query: 530 SQDIGAKAAGRAMEKKLTHDMMENSYG 556
+ +G A +A +S G
Sbjct: 505 AAALGQGMAAQATASPEAMASAADSVG 531
>gi|68299738|ref|YP_249587.1| Head-to-tail joining protein [Vibriophage VP4]
gi|66473277|gb|AAY46286.1| head-to-tail joining protein [Vibriophage VP4]
Length = 532
Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats.
Identities = 75/514 (14%), Positives = 154/514 (29%), Gaps = 41/514 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+N LKN RG E+ + P + + W + G+ L+S L
Sbjct: 18 YNRLKNDRGAYETRAEDCATYTIPSVFPSATADGSTSYTTPWQSIGARGLNNLASKLMLA 77
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + L S + + ++ V + E + F L +
Sbjct: 78 LFPVGSSFFKLNVSELEVKQSITS-PEELTEIATGLAMVERICMNYMESN--SFRPTLHA 134
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y+ + +G + + N + + + V + E
Sbjct: 135 AIKQLLVAGNVLLYIPSTEQVEGQSNAPKLYKLH--NFVVERDAYDNVLQIVTEDKIARA 192
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ V S + +N +E TI V +D F S E
Sbjct: 193 A----LPEDVRKSLEDAQGDQNPSEEVTIYTHV--------YRDPEAMVFRSYQEIDGEI 240
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
E + + P+I R +E YGRS E L ++ L + + +S
Sbjct: 241 VAGTEGEYPLDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKMSMISSKV 300
Query: 303 PTIAVSEAKQRNFDL-KPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + K + A ++ +FQ ++ + + +++ + F
Sbjct: 301 LFFVNPNGVTQIRRVAKANTGDFVAGRKQDVEVFQLEKYNDFQVAKATADDIEKRLSYAF 360
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+L+ V +A E E +G + L E ++ L L + +P
Sbjct: 361 MLN-SAVQRGGDRVTAEEIRYVAGELEDTLGGVYSLLSQELQLPLVKILLKELQATSKIP 419
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
P +E L + + ++ +++L D ++
Sbjct: 420 NLPKEAVEPAIATGLE---ALGRG---HDLNKLNVFIDYMIKLAGLQDDD-----INLLD 468
Query: 482 VSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQR 514
V + LI + + +
Sbjct: 469 VKMRLANSLGMDTTGLILTQQDKQAKMAEASTAA 502
>gi|281416195|ref|YP_003347930.1| head-to-tail joining protein [Vibrio phage N4]
gi|325171309|ref|YP_004251280.1| head-to-tail joining protein [Vibrio phage ICP3]
gi|237701502|gb|ACR16495.1| head-to-tail joining protein [Vibrio phage N4]
gi|323512015|gb|ADX87477.1| head-to-tail joining protein [Vibrio phage ICP3]
gi|323512160|gb|ADX87619.1| head-to-tail joining protein [Vibrio phage ICP3_2008_A]
gi|323512208|gb|ADX87666.1| head-to-tail joining protein [Vibrio phage ICP3_2007_A]
Length = 532
Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats.
Identities = 75/514 (14%), Positives = 155/514 (30%), Gaps = 41/514 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+N LKN RG E+ + P + + W + G+ L+S L
Sbjct: 18 YNRLKNDRGAYETRAEDCATYTIPSVFPSATADGSTSYTTPWQSIGARGLNNLASKLMLA 77
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + L S + + ++ V + E + F L +
Sbjct: 78 LFPVGSSFFKLNVSELEVKQSITS-PEELTEIATGLAMVERICMNYMESN--SFRPTLHA 134
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y+ + +G + + N + + + V + E
Sbjct: 135 AIKQLLVAGNVLLYIPSTEQVEGQSNAPKLYKLH--NFVVERDAYDNVLQIVTEDKIARA 192
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ V S ++ +N +E TI V +D F S E
Sbjct: 193 A----LPEDVRKSLEEAQGDQNPSEEVTIYTHV--------YRDPEAMVFRSYQEIDGEI 240
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
E + + P+I R +E YGRS E L ++ L + + +S
Sbjct: 241 VAGTEGEYPLDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKMSMISSKV 300
Query: 303 PTIAVSEAKQRNFDL-KPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + K + A ++ +FQ ++ + + +++ + F
Sbjct: 301 LFFVNPNGVTQIRRVAKANTGDFVAGRKQDVEVFQLEKYNDFQVAKATADDIEKRLSYAF 360
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+L+ V +A E E +G + L E ++ L L + +P
Sbjct: 361 MLN-SAVQRGGDRVTAEEIRYVAGELEDTLGGVYSLLSQELQLPLVKILLKELQATSKIP 419
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
P +E L + + ++ +++L D ++
Sbjct: 420 NLPKEAVEPAIATGLE---ALGRG---HDLNKLNVFIDYMIKLAGLQDDD-----INLLD 468
Query: 482 VSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQR 514
V + LI + + +
Sbjct: 469 VKMRLANSLGMDTTGLILTQQDKQAKMAEASTAA 502
>gi|303327895|ref|ZP_07358334.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861721|gb|EFL84656.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 554
Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats.
Identities = 96/549 (17%), Positives = 196/549 (35%), Gaps = 36/549 (6%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN---------NAQLRMWDTTGSE 52
+ K+++ +L++ R + EL + P + + +++ +
Sbjct: 4 ARMDLKEVKQLVGHLESLRAKRLAQQRELGRLILPSRGLFQGEDTESLRESNLFNPAANR 63
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
A K ++ ++ ITP G W AFL + D + E+ D V + L
Sbjct: 64 ALRKAAAGMTQAITPAGNPWFK--------HAFLLRRDREATGGNEYVDTVDNMLRTV-- 113
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
S GF + SF ++ FG E RY +++ +
Sbjct: 114 LSAGGFYRAIHSFNKELLGFGCALLGCEESP-----RTVARYFCQTCGTYCAALDEDGNL 168
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGN 231
D+V R T ++ ++G+ LS + L ++ + + H V ++ D + D+ N
Sbjct: 169 DAVARRLLMTPRELARRFGEDRLSDVSRQKLKKDSYDPVAVRHVVQRRTARDPERADRSN 228
Query: 232 KGFHSKFVSVDE-NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
+ S + F + + P+ + +YG P EAL + +
Sbjct: 229 MPWGSWWYEEGGAADFLDVGGFRSMPFFFTVWEEARG-VYGTGPGDEALADQKGIEGWEL 287
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNI-GALSREGRSLFQPVQFGNP-LPYHE 348
A + P + + D PG + G + V FG E
Sbjct: 288 RKAVGVEKMIDPV-LVSQGPLKAYVDTSPGAVIPSGGFGADSLKPLYEVNFGPAVQHVQE 346
Query: 349 ELNRLKESIRSLFLLDLFQVLD---DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGA 405
E++++ + + + ++F + A + E M++ R +GP + G + +
Sbjct: 347 EISQISLRLEDVMMANIFASMSLETRPAGMTMTEYMDRRRRSAELMGPTVSGYEPRILSP 406
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
++ +L+ G LP + P + L V Y SP+ + + + +
Sbjct: 407 VLENTFGLLEEYGLLPGPPDGLS-PFASLNVSYQSPMAQMLEQSGAVAIQSLFELAAPM- 464
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
P D +D ++ PA ++R V +RQQR + ++Q + +
Sbjct: 465 -LRAVPDLADKIDFEQAIDELAQRLGVPASVVRSDETVAAMRQQRAEAQAAQQQQMAEAR 523
Query: 526 LQQTSQDIG 534
+ Q +G
Sbjct: 524 MLQQVAALG 532
>gi|323512062|gb|ADX87523.1| head-to-tail joining protein [Vibrio phage ICP3_2009_B]
gi|323512111|gb|ADX87571.1| head-to-tail joining protein [Vibrio phage ICP3_2009_A]
Length = 532
Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats.
Identities = 75/514 (14%), Positives = 155/514 (30%), Gaps = 41/514 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+N LKN RG E+ + P + + W + G+ L+S L
Sbjct: 18 YNRLKNDRGAYETRAEDCATYTIPSVFPSATADGSTSYTTPWQSIGARGLNNLASKLMLA 77
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + L S + + ++ V + E + F L +
Sbjct: 78 LFPVGSSFFKLNVSELEVKQSITS-PEELTEIATGLAMVERICMNYMESN--SFRPTLHA 134
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y+ + +G + + N + + + V + E
Sbjct: 135 AIKQLLVAGNVLLYIPSTEQVEGQSNAPKLYKLH--NFVVERDAYDNVLQIVTEDKIARA 192
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ V S ++ +N +E TI V +D F S E
Sbjct: 193 A----LPEDVRKSLEEAQGDQNPSEEVTIYTHV--------YRDPEAMVFRSYQEIDGEI 240
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
E + + P+I R +E YGRS E L ++ L + + +S
Sbjct: 241 VAGTEGEYPLDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKMSMISSKV 300
Query: 303 PTIAVSEAKQRNFDL-KPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + K + A ++ +FQ ++ + + +++ + F
Sbjct: 301 LFFVNPNGVTQIRRVAKANTGDFVAGRKQDVEVFQLEKYNDFQVAKATADDIEKRLSYAF 360
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+L+ V +A E E +G + L E ++ L L + +P
Sbjct: 361 MLN-SAVQRGGDRVTAEEIRYVAGELEDTLGGVYSLLSQELQLPLVKILLKELQATSKIP 419
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
P +E L + + ++ +++L D ++
Sbjct: 420 NLPKEAVEPAIATGLE---ALGRG---HDLNKLNVFIDYMIKLAGLQDDD-----INLLD 468
Query: 482 VSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQR 514
V + LI + + +
Sbjct: 469 VKMRLANSLGMDTTGLILTQQDKQAKMAEASTAA 502
>gi|194473831|ref|YP_002048655.1| head-to-tail joining protein [Morganella phage MmP1]
gi|194307052|gb|ACF42034.1| head-to-tail joining protein [Morganella phage MmP1]
Length = 543
Score = 284 bits (725), Expect = 4e-74, Method: Composition-based stats.
Identities = 74/541 (13%), Positives = 153/541 (28%), Gaps = 45/541 (8%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
++ LKN R E + P + W + G+ L+S L
Sbjct: 20 YDRLKNDRAPYETRAENCAKYTIPSLFPKSSDNASTDYTTPWQSAGARGLNNLASKLMLA 79
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P W L S + + + E+ KV V + + E + + L
Sbjct: 80 LFPMQT-WMKLTISEFSAKELVGNEEG-LAKVDAALSMVERIIMNYIETN--SYRVALFE 135
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y+ + I+ +P + + V + E
Sbjct: 136 GLKQLIVAGNVLLYLPPPEESDEGYNPIKVYKLP--SFVCQRDSFGNVLQIVTEDKIAFG 193
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ + + S + +E T+ +Y + + +
Sbjct: 194 ALD----EDIRKMVEASGGEKKPDEEITVYTHIYLDDESGQYLKYEE------VEGEEIA 243
Query: 245 RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPT 304
PYI R + E YGRS E L ++ L + + ++
Sbjct: 244 GTDAAYPYEANPYIPVRMVRLSGESYGRSYCEEYLGDLKSLENLHEAMVKMSMIAAKVVG 303
Query: 305 IAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLL 363
+ + + + E Q + + + ++ + F+L
Sbjct: 304 LVNPAGMTQIRQVSKADTGDYVPGKPEDIHFLQLEKQADFSVAKTIADNIEARLSFAFML 363
Query: 364 DLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPEC 423
+ V +A E E +G + L E ++ L+ L + +PE
Sbjct: 364 N-SAVQRTAERVTAEEIRYVASELEDTLGGVYSNLSQELQLPIVKVLLNQLQATAKIPEL 422
Query: 424 EGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVS 483
P +E + + + + + L DP ++ +
Sbjct: 423 PQEAVEPAISTGLEAIG------RGQDLDRLERCIAAWAALAPMANDPD----INLSTIK 472
Query: 484 RFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAME 543
A I E +++ + E +QQ + + +G AG A E
Sbjct: 473 LRIANAIGIDT---------AGILLTEEQKQQKLAEAAMQQGMMTGANQLGGGMAGMATE 523
Query: 544 K 544
Sbjct: 524 S 524
>gi|37956836|gb|AAP34103.1| gene 8 [Enterobacteria phage T7]
gi|37956889|gb|AAP34155.1| gene 8 [Enterobacteria phage T7]
Length = 536
Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats.
Identities = 76/535 (14%), Positives = 144/535 (26%), Gaps = 50/535 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSE 52
+ + AK + + LKN R + + P + W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P W L S + L D KV E V + + E
Sbjct: 65 GLNNLASKLMLALFPMQT-WMRLTISEYEAKQLLSDPDG-LAKVDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+ + L +V G Y+ LS+ + + V
Sbjct: 123 SN--SYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNP----MKLYRLSSYVVQRDAFGNV 176
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK 232
+ + + + + +E + +Y + +
Sbjct: 177 LQMVTRDQIAFGA----LPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGEYLRYEE- 231
Query: 233 GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
++ PYI R E YGRS E L +R L +
Sbjct: 232 -----VEDMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + L + E S Q + + +
Sbjct: 287 VKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQADFTVAKAVSD 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
++ + F+L+ V +A E E +G + L E ++ L
Sbjct: 347 AIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E + + + + V L DP
Sbjct: 406 KQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVTAWAALAPMRNDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
++ + A I T E +++ M +Q +Q +
Sbjct: 460 D----INLAMIKLRIANAIGIDTSGILLTEE---------QKQQKMAQQSMQMGM 501
>gi|194100395|ref|YP_002003970.1| gp8 [Enterobacteria phage 13a]
gi|193201442|gb|ACF15919.1| gp8 [Enterobacteria phage 13a]
Length = 536
Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats.
Identities = 77/539 (14%), Positives = 148/539 (27%), Gaps = 51/539 (9%)
Query: 1 MNQRSA----KDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDT 48
M ++ + + + LKN R + + P + + W
Sbjct: 1 MAEKRTGLAEEGAKSVYERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYVTPWQA 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
G+ L+S L + P W L S + L D KV E V +
Sbjct: 61 VGARGLNNLASKLMLALFPMQT-WMRLTISEYEAKQLLSDPDG-LAKVDEGLSMVERIIM 118
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
+ E + + L +V G Y+ LS+ + +
Sbjct: 119 NYIESN--SYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNP----MKLYRLSSYVVQRDA 172
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKD 228
V + + + + + +E + +Y +D
Sbjct: 173 FGNVLQMVTRDQIAFGA----LPEDIRKAVEGQGGEKKADETIDVYTHIYLD------ED 222
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
G + + ++ PYI R E YGRS E L +R L
Sbjct: 223 SGEYIRYEEVEGMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENL 282
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYH 347
+ + +S + + L + E S Q + +
Sbjct: 283 QEAIVKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQADFTVAK 342
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ ++ + F+L+ V +A E E +G + L E ++
Sbjct: 343 AVSDAIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLV 401
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
L L + +PE P +E + + + + V L
Sbjct: 402 RVLLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVAAWAALAPM 455
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
DP ++ + A I T E +++ M +Q +Q +
Sbjct: 456 RDDPD----INLAMIKLRIANAIGIDTSGILLTEE---------QKQQKMAQQSMQMGM 501
>gi|212703247|ref|ZP_03311375.1| hypothetical protein DESPIG_01289 [Desulfovibrio piger ATCC 29098]
gi|212673291|gb|EEB33774.1| hypothetical protein DESPIG_01289 [Desulfovibrio piger ATCC 29098]
Length = 552
Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats.
Identities = 98/564 (17%), Positives = 197/564 (34%), Gaps = 42/564 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN---------AQLRMWDTTGS 51
M + K+++ +L+ R + E+ + P + + +
Sbjct: 1 MAAPTLKELKQLVAHLEGLRSKRLAQQWEIGKLILPSRGLFQGEETECLRDANLLNPAAQ 60
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
A K ++ ++ ITP W FL + D E+ D V +
Sbjct: 61 RALGKAAAGMTQAITPASSPWFR--------HQFLDRADREVTGGNEYVDVVDARIRAV- 111
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
+ GF + +F ++ FG +A R+ ++++
Sbjct: 112 -LAAGGFYSAIHAFNRELLGFGCALLSCDA-----SARTVARFACQTCGTYAVALDEDRT 165
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-DKG 230
+ V R T ++ ++G L + L ++ V + D ++ D
Sbjct: 166 LSCVVRRLRMTPVEMSRRFGRDRLCEATRQKLESQPYAPIEVVQVVRKREERDPERGDNR 225
Query: 231 NKGFHS-KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
N F S + E + P+ + +YG P +AL + +
Sbjct: 226 NMPFASFWYEDQGGTELLRESGFRSMPFFFSTWEDARG-VYGTGPGDDALADQKGIEAWE 284
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRS--LFQPVQFGNP-LPY 346
A + + PP +A +R+ PG + + + V FG
Sbjct: 285 KRKAVGIEMMIQPPLLAP-GTLKRHVRAMPGSVISDTAYGQSNALRPLYEVNFGPAVGAV 343
Query: 347 HEELNRLKESIRSLFLLDLFQVLD---DKASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
+E+ ++ + + ++F + A + E M++ R +GP + + +
Sbjct: 344 QQEIEQISMRLEDVMKANIFANMSLETRPAGMTMTEYMDRRRRAAELMGPTVSSYEPRVL 403
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVE 463
I R +LD +G LP + P + L V Y SP+ + + + S Q ++ V
Sbjct: 404 TLCIERVYQLLDEEGLLPPPPQGLS-PWATLNVSYQSPMAQMLEQAAAVSIGQFMDQVGP 462
Query: 464 LGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQ 523
P+ +D +D D++ PA +IR +V IRQQRE ++ ++
Sbjct: 463 WAQSQ--PTILDKLDLDQMVDELAQRLGVPASIIRSDEQVAAIRQQREQAAAAQQQAAME 520
Query: 524 QQLQQTSQDIG-----AKAAGRAM 542
Q+ ++ +G AG+ M
Sbjct: 521 VQMMESMAKMGNVKTEGTVAGKVM 544
>gi|9627467|ref|NP_041995.1| head-tail connector protein [Enterobacteria phage T7]
gi|138414|sp|P03728|VHTJ_BPT7 RecName: Full=Head-to-tail joining protein
gi|15602|emb|CAA24425.1| unnamed protein product [Enterobacteria phage T7]
gi|37956678|gb|AAP33948.1| gene 8 [Enterobacteria phage T7]
gi|265524999|gb|ACY75862.1| head-to-tail joining protein [Enterobacteria phage T7]
Length = 536
Score = 280 bits (715), Expect = 6e-73, Method: Composition-based stats.
Identities = 76/535 (14%), Positives = 144/535 (26%), Gaps = 50/535 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSE 52
+ + AK + + LKN R + + P + W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P W L S + L D KV E V + + E
Sbjct: 65 GLNNLASKLMLALFPMQT-WMRLTISEYEAKQLLSDPDG-LAKVDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+ + L +V G Y+ LS+ + + V
Sbjct: 123 SN--SYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNP----MKLYRLSSYVVQRDAFGNV 176
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK 232
+ + + + + +E + +Y + +
Sbjct: 177 LQMVTRDQIAFGA----LPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGEYLRYEE- 231
Query: 233 GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
++ PYI R E YGRS E L +R L +
Sbjct: 232 -----VEGMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + L + E S Q + + +
Sbjct: 287 VKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQADFTVAKAVSD 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
++ + F+L+ V +A E E +G + L E ++ L
Sbjct: 347 AIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E + + + + V L DP
Sbjct: 406 KQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVTAWAALAPMRDDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
++ + A I T E +++ M +Q +Q +
Sbjct: 460 D----INLAMIKLRIANAIGIDTSGILLTEE---------QKQQKMAQQSMQMGM 501
>gi|158425212|ref|YP_001526504.1| head-to-tail joining protein [Azorhizobium caulinodans ORS 571]
gi|158332101|dbj|BAF89586.1| head-to-tail joining protein [Azorhizobium caulinodans ORS 571]
Length = 511
Score = 279 bits (714), Expect = 7e-73, Method: Composition-based stats.
Identities = 63/510 (12%), Positives = 131/510 (25%), Gaps = 50/510 (9%)
Query: 4 RSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACI 55
+ A R+ L R + P N + G+
Sbjct: 3 KPATTAAGRYTQLATIRSPYLERARDCATLTIPSLMPRAGHGAANDLPTPFQGMGARGVN 62
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
L S L + PP Q + L A L +D +V + Q+ + E
Sbjct: 63 NLGSKLLLALMPPNQPFFRLMLDDFAL-QELTGQDGMRTEVEKALGQIERAVQTEVETGA 121
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
++ G Y++ L + + V +
Sbjct: 122 --IRVSAFEALKQLLVAGNVLLYVQPTGGV---------KVYRLDRYVVKRDPSGNVLEI 170
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFH 235
+ + + K+ + + +++ G H
Sbjct: 171 VIHERVSPLALPEELQRKLGEQRKGVQDTIDLYTWI--------------RRESGKFVVH 216
Query: 236 SKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
+ E P+I R+ E YGR E + +R L + +
Sbjct: 217 QEVKGEKVPGTDGEWPTDKAPFIALRWAKIDGEDYGRGHVEEYIGDLRSLEALTRAIVEG 276
Query: 296 GRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN---R 352
+ + + A+ + +Q + L R
Sbjct: 277 AAAAAKVLFLVNPNGVTNERTISEA--PNMAVRSGNKEDVNVLQVEKFNDFRVALETVGR 334
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
L+ + FLL + D +A E E +G + L EF ++ R +
Sbjct: 335 LEIRLSQAFLLTSS-IQRDAERVTAEEIRVMAGELEDALGGVYSILAQEFQLPLVRRLIF 393
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
++ LP P + +E L + + + + G +
Sbjct: 394 QMEQDERLPSLPPDLVKPSIITGME---ALGRG------HDLNRLMMFAKVVNDLLGPGA 444
Query: 473 CMDHMDTDRVSRFSLWATNTPA-VLIRDTA 501
+ D ++ + A + +++
Sbjct: 445 LPSYADARKLIERAGVALSVDTSDILKSDE 474
>gi|37956731|gb|AAP34000.1| gene 8 [Enterobacteria phage T7]
gi|37956781|gb|AAP34049.1| gene 8 [Enterobacteria phage T7]
Length = 536
Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats.
Identities = 76/535 (14%), Positives = 144/535 (26%), Gaps = 50/535 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSE 52
+ + AK + + LKN R + + P + W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P W L S + L D KV E V + + E
Sbjct: 65 GLNNLASKLMLALFPMQT-WMRLTISEYEAKQLLSDPDG-LAKVDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+ + L +V G Y+ LS+ + + V
Sbjct: 123 SN--SYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNP----MKLYRLSSYVVQRDAFGNV 176
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK 232
+ + + + + +E + +Y + +
Sbjct: 177 LQMVTRDQIAFGA----LPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGEYLRYEE- 231
Query: 233 GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
++ PYI R E YGRS E L +R L +
Sbjct: 232 -----VEGMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + L + E S Q + + +
Sbjct: 287 VKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQADFTVAKAVSD 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
++ + F+L+ V +A E E +G + L E ++ L
Sbjct: 347 AIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E + + + + V L DP
Sbjct: 406 KQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVTAWAALAPMRDDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
++ + A I T E +++ M +Q +Q +
Sbjct: 460 D----INLAMIKLRIANAIGIDTSGILLTEE---------QKQQKMVQQSMQMGM 501
>gi|30387485|ref|NP_848294.1| head-to-tail joining protein [Yersinia pestis phage phiA1122]
gi|30314122|gb|AAP20530.1| head-to-tail joining protein [Yersinia pestis phage phiA1122]
Length = 536
Score = 277 bits (709), Expect = 3e-72, Method: Composition-based stats.
Identities = 77/535 (14%), Positives = 146/535 (27%), Gaps = 50/535 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSE 52
+ + AK + + LKN R + + P + W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P W L S + L D KV E V + + E
Sbjct: 65 GLNNLASKLMLALFPMQT-WMRLTISEYEAKQLLSDPDG-LAKVDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+ + L +V G Y+ LS+ + + V
Sbjct: 123 SN--SYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNP----MKLYRLSSYVVQRDAFGNV 176
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK 232
+ + + + + +E + +Y + G
Sbjct: 177 LQMVTRDQIAFGA----LPEDIRKAVEGQGGEKKADETIDVYTHIYLD------EASGEY 226
Query: 233 GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ + ++ PYI R E YGRS E L +R L +
Sbjct: 227 LRYEEVEGMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + L + E S Q + + +
Sbjct: 287 VKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQADFTVAKAVSD 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
++ + F+L+ V +A E E +G + L E ++ L
Sbjct: 347 AIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E + + + + V L DP
Sbjct: 406 KQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVTAWAALAPMRDDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
++ + A I T E +++ M +Q +Q +
Sbjct: 460 D----INLAMIKLRIANAIGIDTSGILLTEE---------QKQQKMAQQSMQMGM 501
>gi|77118196|ref|YP_338118.1| head to tail connector [Enterobacteria phage K1F]
gi|72527940|gb|AAZ72992.1| head to tail connector [Enterobacteria phage K1F]
gi|83308148|emb|CAJ29381.1| gp8 protein [Enterobacteria phage K1F]
Length = 522
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 88/559 (15%), Positives = 165/559 (29%), Gaps = 52/559 (9%)
Query: 1 MNQRS---AKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTT 49
M +R A+ + ++ LKN R + P + W
Sbjct: 1 MAEREGFAAEGAKAVYDRLKNGRQPYETRAQNCAAVTIPSLFPKESDNSSTEYTTPWQAV 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ L++ L + P W L S + +A ++ V E V L
Sbjct: 61 GARCLNNLAAKLMLALFP-QSPWMRLTVSEYEAKTLSQDSEAAAR-VDEGLAMVERVLMA 118
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ E + F L ++ G Y+ E+G +R L + + +
Sbjct: 119 YMETN--SFRVPLFEALKQLIVSGNCLLYIPEP--EQGTYSPMRM--YRLVSYVVQRDAF 172
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
+ + + K L +KS L ++ E T + T +
Sbjct: 173 GNILQIVT---------IDKVAFSALPEDVKSQLNADDYEPDTELEV-----YTHIYRQD 218
Query: 230 GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
+ + ++ + PYI R E YGRS E L + L
Sbjct: 219 DEYLRYEEVEGIEVTGTDGSYPLTACPYIPVRMVRLDGEDYGRSYCEEYLGDLNSLETIT 278
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE 349
+ + +++ + + L G +Q +
Sbjct: 279 EAITKMAKVASKVVGLVNPNGITQPRRLNKAAT--GEFVAGRVEDINFLQLTKGQDFTIA 336
Query: 350 ---LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+ +++ + FLL V + +A E E A +G + E +
Sbjct: 337 KSVADAIEQRLGWAFLL-NSAVQRNAERVTAEEIRYVAGELEATLGGVYSVQSQELQLPI 395
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ ++ L S G +P+ P +E L + Q E + Q VN + L
Sbjct: 396 VRVLMNQLQSAGMIPDLPKEAVEPTVSTGLE---ALGRGQDLEKLT---QAVNMMTGLQP 449
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
+ DP ++ + L A A L+ E I++ E + Q
Sbjct: 450 LSQDPD----INLPTLKLRLLNALGIDTAGLLLTQDE--KIQRMAEQSSQQAVVQGASAA 503
Query: 526 LQQTSQDIGAKAAGRAMEK 544
+G A +
Sbjct: 504 GANMGAAVGQGAGEDMAQA 522
>gi|194100340|ref|YP_002003770.1| gp8 [Enterobacteria phage EcoDS1]
gi|193201335|gb|ACF15814.1| gp8 [Enterobacteria phage EcoDS1]
Length = 522
Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats.
Identities = 86/559 (15%), Positives = 164/559 (29%), Gaps = 52/559 (9%)
Query: 1 MNQRS---AKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTT 49
M +R A+ + ++ LKN R + P + W +
Sbjct: 1 MAEREGFAAEGAKAVYDRLKNGRQPYETRAQNCAAVTIPSLFPKESDNSSTEYTTPWQSV 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ L++ L + P W L S + +A ++ V E V L
Sbjct: 61 GARCLNNLAAKLMLALFP-QSPWMRLTVSEYEAKTLSQDSEAAAR-VDEGLAMVERVLMA 118
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ E + F L ++ G Y+ E+G +R L + + +
Sbjct: 119 YMETN--SFRVPLFEALKQLIVSGNCLLYIPEP--EQGTYSPMRM--YRLVSYVVQRDAF 172
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
+ + + K L +KS L ++ E T + T +
Sbjct: 173 GNILQIVT---------LDKVAFSALPEDVKSQLNTDDYEPDTELEV-----YTHIYRQD 218
Query: 230 GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
+ + ++ + PYI R E YGRS E L + L
Sbjct: 219 DEYLRYEEVEGIEVTGTDGSYPLTACPYIPVRMVRLDGEDYGRSYCEEYLGDLNSLETIT 278
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE 349
+ + +++ + + L G +Q +
Sbjct: 279 EAITKMAKVASKVVGLVNPNGITQPRRLNKAAT--GEFVAGRVEDINFLQLTKGQDFTIA 336
Query: 350 ---LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+ +++ + FLL V + +A E E A +G + E +
Sbjct: 337 KSVADAIEQRLGWAFLL-NSAVQRNAERVTAEEIRYVAGELEATLGGVYSVQSQELQLPI 395
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ ++ L S G +P+ P +E L + Q E + Q VN + L
Sbjct: 396 VRVLMNQLQSAGMIPDLPKEAVEPTVSTGLE---ALGRGQDLEKLT---QAVNMMTGLQP 449
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
DP ++ + L A A L+ E +++ E +
Sbjct: 450 LQQDPD----INLPTLKLRLLNALGIDTAGLLLTQDE--KLQRMAEQSAQGAVVNGASAA 503
Query: 526 LQQTSQDIGAKAAGRAMEK 544
+G A +
Sbjct: 504 GANMGAAVGQGAGEDMAQA 522
>gi|29366727|ref|NP_813772.1| head-tail connector protein [Pseudomonas phage gh-1]
gi|29243586|gb|AAO73165.1|AF493143_26 head-tail connector protein [Pseudomonas phage gh-1]
Length = 543
Score = 274 bits (700), Expect = 3e-71, Method: Composition-based stats.
Identities = 82/570 (14%), Positives = 166/570 (29%), Gaps = 58/570 (10%)
Query: 1 MNQRSAKDIQDR-----FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWD 47
M + + + + + LKN R E P + W
Sbjct: 1 MAETKREGLAEEGAKAVYERLKNDRVPYETRAENCAKVTIPSLFPKDSDNSSTDYTTPWQ 60
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
G+ LS+ + + P W L S + + + ++ V + V L
Sbjct: 61 AVGARGLNNLSAKVMLALFPLQS-WMKLKVSEWQAKQLV-SDPSQLAVVEQGLGMVERIL 118
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
+ E + + L + GT Y+ ++ L N + +
Sbjct: 119 MSYMEAN--SYRVTLFELIRQLALAGTALIYLPPPDASSNSYNPMKL--YTLHNHVVQRD 174
Query: 168 HQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK 227
V + + K L ++++L+ + + + T
Sbjct: 175 AFGNVLQIVT---------LDKVAYAALPEDVRNSLSGGQEYKPEQE----LEVYTHIYI 221
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
D + F S + Q P+I R+ R E YGRS E L + L
Sbjct: 222 DDESGDFLSYQEIEGVEVDGSDGQYPQDALPWIAVRWTKRDGEHYGRSHVEEYLGDLNSL 281
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPL 344
+ +F +S + + L + A + Q + +
Sbjct: 282 ESLNEAMIKFAMISSKVVGLVNPNGITQVRRLVKAQTGDFVAGRKADIEFLQLEKTADFT 341
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
+ ++ + +F+L V +A E E +G + L E
Sbjct: 342 VAKSVADAIEARLSYVFML-NSAVQRSGERVTAEEIRYVASELEDTLGGVYSILSQELQL 400
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ L+ L + +P P E L + Q + Q +N V +
Sbjct: 401 PIVRVLLNQLQATQQIPNLPQEAVEPTVTTGAE---ALGRGQ---DLDKLTQFLNAVATV 454
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQ 524
GDP ++ + + A + + + ++ L+Q
Sbjct: 455 SQLNGDPD----LNVNNIKLRLANAIGIDT---------AGLLLTEAEKAQAQSQEMLKQ 501
Query: 525 QLQQTSQDIGAKAAGRAMEKKLTHDMMENS 554
+ IG+ A +A + + ME++
Sbjct: 502 GGLNAAAGIGSGVAAQATA---SPEAMESA 528
>gi|317487284|ref|ZP_07946079.1| hypothetical protein HMPREF0179_03442 [Bilophila wadsworthia 3_1_6]
gi|316921474|gb|EFV42765.1| hypothetical protein HMPREF0179_03442 [Bilophila wadsworthia 3_1_6]
Length = 554
Score = 263 bits (672), Expect = 6e-68, Method: Composition-based stats.
Identities = 72/549 (13%), Positives = 153/549 (27%), Gaps = 46/549 (8%)
Query: 11 DRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLS 62
R+ L R PY + ++ + G+ L+S L
Sbjct: 22 TRYTELSQDRAPYLDRARRCAELTIPYLIPPDDLAQGQELPSLYQSVGANGVTNLASKLL 81
Query: 63 SLITPPGQKWHGLAESFSAYQAFLYKEDAR-SKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ PP + L + + D K+ + ++ + + SG
Sbjct: 82 LTMLPPNEPCFRLRVNNLVVEREEENADKEFRTKIEKALSRIEQAVLA--DIEASGDRPV 139
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTF 181
+ ++ G ++ + PLS + + + E T
Sbjct: 140 VAEGNQHLIVAGNVLYHDDPKKG---------LRLFPLSRYVVERDPMGTPVEIVVEETV 190
Query: 182 TVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSV 241
+D + ++ +++ A T K+ + + V
Sbjct: 191 NLDTLPED-----VAERIREAADTLGQPSIKGDDRKDVNIYTHLKRGPKKWSVYQECRGV 245
Query: 242 DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLH 301
++ P++ R A E YGRS L + L L + +S
Sbjct: 246 KLPGSEGSYKLEACPWLPVRMYSIAGENYGRSFVELQLGDLGSLESLCQSLVEGSAVSAK 305
Query: 302 PPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH---EELNRLKESIR 358
+ L G + +Q + ++ RL++ ++
Sbjct: 306 VVGLVNPNGVTDPKALAESA--NGDMIEGNADDVAFLQVQKGADFQVVAAQIQRLEQRLK 363
Query: 359 SLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQG 418
+ FL+ + V D +A E +E +G + + EF I+ + + Q
Sbjct: 364 TAFLM-MDGVRRDAERVTAEEIRVIAQELETGLGGVYTLISQEFQLPYIASRMATMTRQK 422
Query: 419 NLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMD 478
+PE P + E + + + + G + S + ++
Sbjct: 423 RIPELPKGTVTPSIVTGFEAI---------GRGNDKQKLLEFL-KAGTELMGESFLGLLN 472
Query: 479 TDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQH----LQQQLQQTSQDI 533
A L++D E+ RQ + Q + +
Sbjct: 473 PQNAVTRLASAMGISTEGLVKDEEELAQERQAAQQQAQGQMMMEKLGPEALRQIGGMAQA 532
Query: 534 GAKAAGRAM 542
G A + M
Sbjct: 533 GNAEALQGM 541
>gi|282857730|ref|ZP_06266939.1| head-to-tail joining protein [Pyramidobacter piscolens W5455]
gi|282584400|gb|EFB89759.1| head-to-tail joining protein [Pyramidobacter piscolens W5455]
Length = 534
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 67/503 (13%), Positives = 142/503 (28%), Gaps = 45/503 (8%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY-------KNNAQLRMWDTTGSEACIKLSSL 60
+ RF L R E+ + PY + + G+E LSS
Sbjct: 17 TFKARFELLAGIRESYCQRAEQCSALTDPYLFPKDGVTGEKVASPYQSVGAEGVTNLSSR 76
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
+ ++I PP + L + L +E +++ E Q+ + E
Sbjct: 77 ILNIILPPNRPPFRLRVEKNPA---LPEEKRNWQQIEEGLAQLEKMVCDHIETLE--DRV 131
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ ++ G ++ D GIR S L N +S + + V +
Sbjct: 132 VIAEAIPHLLVTGNVLLHVRKD--------GIRLHS--LRNYVVSRDPRGNVAEIIVREK 181
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
+ + ++ + + S
Sbjct: 182 VDPRFLALPLATSTTDAPENDRRPEDKASYKELFTQIKRTENG-----------WSLQQE 230
Query: 241 VDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRL 298
VD + P++ R + E YGR + L + L + +
Sbjct: 231 VDGKFVSKHGHYKKDECPWLPLRMYRVSGESYGRGYVEKYLGDHKSLEALTKAIVEGAAA 290
Query: 299 SLHPPTIAVSEAKQRNFDL-KPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
+ + L + G + I S S Q + + + L++ +
Sbjct: 291 CAKVVFLVSPNGTLKAKQLEEAGNLAILTGSAAEVSTVQVQKANDFQIAKAMADNLQQRL 350
Query: 358 RSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
+LL+ + + +A E +E +G L L EF + + +
Sbjct: 351 SRAYLLN-SAIQRNAERVTAEEIRYMAQELETALGGLYSMLSMEFQHPYVKLRMKYMKED 409
Query: 418 GNLPECEGADNPPVSLLKVE-YTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDH 476
LP+ + +K+ L + Q A + + G + +
Sbjct: 410 ALLPDLDQQYQEGKVGVKIVTGIDALGRGQDASRLT------EWAGIVFKTIGPQVALPY 463
Query: 477 MDTDRVSRFSLWATNTP-AVLIR 498
++ + + L++
Sbjct: 464 INASAFMKALANSMGIDGVSLLK 486
>gi|326536937|ref|YP_004306344.1| head-tail connector protein [Pseudomonas phage phiIBB-PF7A]
gi|318054513|gb|ADV35689.1| head-tail connector protein [Pseudomonas phage phiIBB-PF7A]
Length = 535
Score = 261 bits (666), Expect = 3e-67, Method: Composition-based stats.
Identities = 76/566 (13%), Positives = 151/566 (26%), Gaps = 58/566 (10%)
Query: 1 MNQRSA----KDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDT 48
M + + + ++ LK+ R E P + +
Sbjct: 1 MAETRTGLAEEGAKAVYDRLKSDRAPYETRAENCAKVTIPSLFPKESDNSSTNYTTPYQA 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
G+ L++ + + P + W L S + + + V + V L
Sbjct: 61 VGARGVNNLAAKVHMALFPL-EPWMKLKVSEWQAKQLVT-DPEELAMVEQGLSMVERILM 118
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
+ E + + L +V G GC Y+ L N + +
Sbjct: 119 SYMEAN--SYRTTLHELIRQLVIAGAGCLYLPPPESSSQGSP---MKLYTLHNHVVQRDA 173
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKD 228
V + + + K +E + VY +
Sbjct: 174 FGNVLQICTLDRVAFAALPEDV-------RTKLDGEHKPDEEIEVYTHVYLDDESGDYLS 226
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
+ + + + P++ R+ R E YGRS E + L
Sbjct: 227 ------YQEIDGEEVEGTDGQYPREAMPWVAVRWTKRDGEHYGRSHVEEYQGDLDSLENL 280
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ +F ++ + + L GA ++ + +Q +
Sbjct: 281 HEAMIKFSMIASKVVGLVNPNGITQVRRLTKAQT--GAFVPGRKADIEFLQLDKAADFSV 338
Query: 349 ELNRLKESIRSLFLLDLFQ--VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+ + L + + V + +A E RE +G + L E +
Sbjct: 339 AKSVADAIEQRLSYVFMLNSAVQRNGERVTAEEIRYVARELEDTLGGVYSILSQELQLPI 398
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
I L+ L + +P+ P VE L + Q + + LQ + V L
Sbjct: 399 IRILLNQLQATQQIPDMPKEAVEPTVSTGVE---ALGRGQDLDKMTQFLQALQLVAPLEN 455
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQ--------RRVM 517
++ + A L+ E + + Q
Sbjct: 456 DQD-------LNITTIKLRLANAMGLDTSGLLLTQEEKAQKQAEMMAQTGGENLAGAAGA 508
Query: 518 EEQHLQQQLQQTSQDIGAKAAGRAME 543
+ Q T QD A M+
Sbjct: 509 GAGAMMTQDPDTMQD---AMATAGMD 531
>gi|313892489|ref|ZP_07826078.1| head-to-tail joining protein [Dialister microaerophilus UPII 345-E]
gi|313119068|gb|EFR42271.1| head-to-tail joining protein [Dialister microaerophilus UPII 345-E]
Length = 516
Score = 259 bits (662), Expect = 8e-67, Method: Composition-based stats.
Identities = 64/506 (12%), Positives = 137/506 (27%), Gaps = 48/506 (9%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIK 56
+ + + LK R E + P + + + G+
Sbjct: 9 RKETAKAVYERLKQARTPYIERAVECAKYTIPSLFPRDGSTGSTKFETPYQSVGARGVNN 68
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L+S L + PP + L+ A Q L + +V + ++ + + E +
Sbjct: 69 LASKLMLALFPPNANYFKLSPGDEA-QQELDQTPQAKAQVDQALMKMESKIVEYAEAHQ- 126
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
+ L ++ G ++ L+ + + V +
Sbjct: 127 -YRVTLAEALKVLIVTGNDLLFLPPKEGG--------MKLYKLNTYVLERDALGNVIQIV 177
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHS 236
+ D+V KS + + I VY + +
Sbjct: 178 AVDKISYVA----LPDEVKRMVDKSGTTPTTSTQVEIYTHVYLEDDQYLS--------YQ 225
Query: 237 KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
++ + + P+I R E YGRS E L + L + +
Sbjct: 226 EYKGQIIPQSEQSYPKDKTPWIPLRMVKVDGESYGRSFVEEYLGDFKSLENLTKSIVEAS 285
Query: 297 RLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKES 356
++ + + R L G +Q + +++
Sbjct: 286 LVAANILFLVNPNGVTRVRHLAKA--KSGDFVSGRIEDIGTLQINKYADLQVVSSTIEQI 343
Query: 357 IRSLFLLDLFQ--VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
L + V +A E E +G + L E ++ R L L
Sbjct: 344 TARLSYAFMLNSAVQRQGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRRLLAQL 403
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
S G LP E P +E L + + + + + + +P
Sbjct: 404 MSLGQLPALEDGLVEPTITTGLE---ALGRG---HDLNKLITFMQLIQQ------NPQQA 451
Query: 475 DHMDTDRVSRFSLWATNTP-AVLIRD 499
+ + ++ A +++
Sbjct: 452 QAIKWNEMTIMEATALGLDVTNIVKT 477
>gi|326424990|ref|YP_004286212.1| virion structural protein [Pseudomonas phage phi15]
gi|325048394|emb|CBZ42007.1| virion structural protein [Pseudomonas phage phi15]
Length = 533
Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 71/517 (13%), Positives = 138/517 (26%), Gaps = 44/517 (8%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLY----P----YKNNAQLRMWDTTGSEACIKLS 58
+ + ++ LK R E P + W G+ LS
Sbjct: 11 EGAKATYDRLKTDRSPYETRAENCAKVTIGSLFPAESDNASTNYATPWQAVGARGVNNLS 70
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ + + P + W L S + L V V + + E + +
Sbjct: 71 AKVHLALFPL-EPWMKLKVSEWQAKQMLGN-PEDLAAVEAGLSMVERVMMSYMEAN--SY 126
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE 178
L +V G Y+ +G + N + V +
Sbjct: 127 RTTLHELIRQLVVAGNALLYLPNPEGTQGSP----MKMYTMHNYVCQRDSFGNVLQIVTL 182
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
+ K+ R +E + VY G+ + +
Sbjct: 183 DKVAFAALPEDVRSKL-------DGDRTPDEEVEVYTHVYRDDE------SGDFLSYQEV 229
Query: 239 VSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRL 298
+ + + P+I R+ R E YGRS E L ++ L + +F +
Sbjct: 230 DGEEIEGTDGQYPVDAMPWIAVRWTKRDGEHYGRSHVEEYLGDLQSLENLSEAMIKFSMI 289
Query: 299 SLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIR 358
+ + + L GA ++ + +Q ++
Sbjct: 290 ASKVIGLVNPNGVTQVRRLTSAQT--GAFVPGRKADIEFLQLEKAADFNIAKAVADNIES 347
Query: 359 SLFLLDLFQ--VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDS 416
L + + V +A E RE +G + L E ++ L+ L +
Sbjct: 348 RLSYVFMLNSAVQRGGERVTAEEIRYVARELEDTLGGVYSILSQELQLPIVRILLNQLQA 407
Query: 417 QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDH 476
+P+ P E L + Q + LQ +N + + D
Sbjct: 408 TQQIPDLPTEAVEPTVSTGAE---ALGRGQ---DLDKMLQFLNALTMVTPLENDQD---- 457
Query: 477 MDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREV 512
++ + A LI E +
Sbjct: 458 LNVKTLKLRIAQAIGVDTTNLILTEDEKAQRMAENMA 494
>gi|325272831|ref|ZP_08139168.1| head-to-tail joining protein [Pseudomonas sp. TJI-51]
gi|324102036|gb|EGB99545.1| head-to-tail joining protein [Pseudomonas sp. TJI-51]
Length = 450
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 66/481 (13%), Positives = 145/481 (30%), Gaps = 35/481 (7%)
Query: 63 SLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCL 122
+ PP + L + L V+ ++ + E +
Sbjct: 1 MALLPPNSPFFRLEI-DEFTEEKLTSNPQMHADVQAGLAKIERAVQT--EIETTAIRVTG 57
Query: 123 QSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFT 182
++ G G Y+ + G+++ PL + + V + + +
Sbjct: 58 FELLKHLIVGGNGLVYL-------PQQGGMKF--YPLDRYVVRRDPMGNVLDIVVKEEVS 108
Query: 183 VDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVD 242
+ + + V R+ N+ +I + K T + +
Sbjct: 109 LAVLPEEARSLVEPGDDSGDTPRDHNKNVSIYTHITLKGET--------WNVYQEVKGQI 160
Query: 243 ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
++ R+ E YGRS E L I+ L + + S
Sbjct: 161 VPGSRGTYPKDKCAWLPIRFVKIDGENYGRSYVEEYLGDIKSLEGLSQAIVEGSAASAKV 220
Query: 303 PTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + +L Q + G+ E +N + E + F
Sbjct: 221 LFLVNPNGVTSSSELAEAPNGEFVDGVASDVQALQLQKSGDFRVALETINTITERLEFAF 280
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+L+ + + +A E E A +G + L EF +++R + + + LP
Sbjct: 281 MLN-SAIQRNGERVTAEEIRYMAGELEAALGGVYSILSQEFQLPLVNRIMFSMQRRKKLP 339
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
E P + +E L + + Q ++T++++ P ++
Sbjct: 340 ELPKGTVSPTIVTGME---ALGRG---NDLTKLDQFISTIMQI------PDAASRINWGN 387
Query: 482 VSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
A L++ EV+ +QQ+++Q+ + Q + G +
Sbjct: 388 YMTRRATALGIDTDGLVKTDQEVQQEQQQQQMQQAMQSGVAPAVQAAGRMMEKGQPDGSQ 447
Query: 541 A 541
A
Sbjct: 448 A 448
>gi|118590948|ref|ZP_01548348.1| hypothetical protein SIAM614_19846 [Stappia aggregata IAM 12614]
gi|118436470|gb|EAV43111.1| hypothetical protein SIAM614_19846 [Stappia aggregata IAM 12614]
Length = 567
Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats.
Identities = 115/565 (20%), Positives = 218/565 (38%), Gaps = 43/565 (7%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYP--YKN----------------------NA 41
D++ + +R + ++ + P + +
Sbjct: 4 VDDLKTELQSARAERQWVEADWQDYVTYTAPDMERAFNRPGGVSARDGMSALRGSAARDR 63
Query: 42 QLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCD 101
+++D T +L+S + SL P G WHG+ A + E+ +
Sbjct: 64 SRKLYDPTAVWLLDRLASGIGSLTMPEGFPWHGVGFGDPFAPAPSQAD-------EEFFE 116
Query: 102 QVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFY-MEADVDEKGLEEGIRYISVPLS 160
V D LF R RSGF +S S V+ GTG + +E + + + Y VPL
Sbjct: 117 LVRDHLFRVRYSGRSGFALANRSRLLSTVKLGTGVLFPVENEDSLADIRTPVHYRYVPLY 176
Query: 161 NVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALA-RNENERFTIIHAVYP 219
+Y+ ++ Q +R T Q V ++ KV + A + +N +T +HA +
Sbjct: 177 EIYLVIDAQGNDCGFFRVRTLKAWQAVKEYAGKVSPKVKEDAADAKRKNTDYTFVHACFL 236
Query: 220 KSLTD-KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEA 278
+ + D F S D +P ++ R+ YG P +
Sbjct: 237 REGGHAQATDTRKSRFESIHFEEDSGHICRRGGFFEYPLVISRWDRDGLSPYGSPPQAKL 296
Query: 279 LPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPV 338
+ I+ L + ++ PP + A++R DL PG +N G + +GR LF+P+
Sbjct: 297 MSDIKSLQSLARDGLIASSQAVRPP--IATHAQERQLDLNPGRINPGLIDEQGRPLFRPM 354
Query: 339 -QFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGG 397
NP ++ ++E +R DL+Q L + R+A E+ + +E +GP
Sbjct: 355 IDTVNPGAADAQIETIREKLRVGLYGDLWQTLLEGNGRTATEANIRRKEMADMIGPFSTN 414
Query: 398 LQSEFIGAMISRELDILDSQGNLP---ECEGADNPPVSLLKVEYTSPLFKYQQAESVASA 454
+ + A+ RE+ IL +G + + + T+P+ + ++A +
Sbjct: 415 IMA-GNEALFEREIGILGRRGAFAPGSPLAPPQSVLEGDVTLTPTAPIDQMREAGHFEAI 473
Query: 455 LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQR 514
+ + DPS +D D + + A PA L R EVE +RQ+R ++
Sbjct: 474 MGFQEYLGIAAGA--DPSILDLHDREAEYDLTRRALGLPAKLRRRPEEVEALRQERAAEQ 531
Query: 515 RVMEEQHLQQQLQQTSQDIGAKAAG 539
+ ++ + + + ++D
Sbjct: 532 QQQQQLATGESMARIARDGAPLLQA 556
>gi|291334897|gb|ADD94534.1| T7-like head to tail connector [uncultured phage
MedDCM-OCT-S08-C159]
Length = 416
Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats.
Identities = 54/394 (13%), Positives = 112/394 (28%), Gaps = 36/394 (9%)
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S + +V G Y+ PLS +
Sbjct: 1 MNQIEISNDRVAMFEALKHLVVSGNVLLYLTDKG----------LKVYPLSKFVCKRDEV 50
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
V + + T + + + +++ K K + I+ + D
Sbjct: 51 GNVLEILTKETVHPQALPADFLEQI---KKKENYDAVTMKEDLDIYTYIQRVNDDVF--- 104
Query: 230 GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
++ + ++ P+I R+ E YGR E + L +
Sbjct: 105 ----WYQECKGEKIPNTDGRSKLDVSPWIPLRFIRVDGEDYGRGYVEEYRGDLISLESLM 160
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE- 348
+ + S + R L GA+ S +Q G +
Sbjct: 161 QAIIEGAAASAKTLFLVNPNGVTRAATLAKA--PNGAIREGLASDISVMQVGKSGDFSVA 218
Query: 349 --ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+ R++ + FL+ V D +AAE +E +G + L EF
Sbjct: 219 FSAIQRIEGRLEFAFLMARS-VQRDAERVTAAEVSLMAQELENSLGGIYSILTQEFQLPY 277
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ R + +L QG +P+ P + + Q + + + +
Sbjct: 278 LRRRMHLLVRQGKVPKLPDELVKPKIVTGL---------QGLGRGNDRNKLIEFIGTVAQ 328
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRD 499
G +++ D + + A L++
Sbjct: 329 ALGPDVMRQYVNVDEAVKRLATSIGIDTANLVKT 362
>gi|256845624|ref|ZP_05551082.1| predicted protein [Fusobacterium sp. 3_1_36A2]
gi|256719183|gb|EEU32738.1| predicted protein [Fusobacterium sp. 3_1_36A2]
Length = 550
Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats.
Identities = 80/544 (14%), Positives = 192/544 (35%), Gaps = 32/544 (5%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLY--------PYKNNAQLRMWDTTGSEACIKLS 58
+ ++ F+ KN + ++ E+ + R ++ ++ L
Sbjct: 8 EKLEYYFDNAKNYKEDIRGLYNEVYEYTDVNFSIKDSGTVEKQSKRGVESVILKSQNFLC 67
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKE----DARSKKVREWCDQVTDTLFGFRERS 114
+ + S I +W + + A++ + + S ++ + + +DT++
Sbjct: 68 NFIMSSIFSKSGRWATVKVNQEAFKKLSGVDGEAAEGLSNEINKVLENNSDTVY--FTND 125
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
+ + ++ GTG + D Y L N+Y+ ++ +
Sbjct: 126 NTNYYTETSKALLDCIKVGTGIRKIIELKDNTKC---FTYAYQNLDNIYILEDNLGKPNI 182
Query: 175 VYREF-TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+++ + ++ I +G +++ K E+ II V +D
Sbjct: 183 IFKVYVEKNLNDINDLFGHLPITTP-KGLNEDKLEEKINIIECVVGVFD----EDTSTYK 237
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
++ + E ++ PY V R+++ + +G +E L + L + +
Sbjct: 238 YYHGLFTEAFEEMLYEGELNYNPYTVFRWKINSSNPWGIGIGLENLDLFKELKDLKEKRK 297
Query: 294 QFGRLSLHPPT-IAVSEAKQRNFDLKPGYMNIGALS-REGRSLFQPVQFGNP-LPYHEEL 350
+ + PP S LK N G + +P+ G LP +++
Sbjct: 298 KHADKIVSPPLNFYGSTDLINKVSLKANAKNYGGSGIGGDKYGVEPINIGTNLLPVEKDI 357
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
++K+ IR +F+ + D +RSA E + + +E +
Sbjct: 358 EQVKQEIREVFMSQPLGDVSDTKNRSATEMSLRHEMFRKEFSGTYELINTELLEPTFMNA 417
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
I+D +G L E ++ +++Y + L + ++ V + +N + L +
Sbjct: 418 YYIMDGKGLLNTTEDESYI--NISQIQYINELTRNAGSDEVINT---INFYMTLSQVVPE 472
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTS 530
D + ++ P ++ E++ + Q++ ME+ L Q+
Sbjct: 473 TQRQFIFKIDELIDWASKKMRVPLDVLNSKEEIKQLIAQQQEL-EQMEKMALIQEGIGKR 531
Query: 531 QDIG 534
QD+G
Sbjct: 532 QDVG 535
>gi|296537022|ref|ZP_06899017.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262651|gb|EFH09281.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 236 bits (601), Expect = 9e-60, Method: Composition-based stats.
Identities = 80/352 (22%), Positives = 135/352 (38%), Gaps = 19/352 (5%)
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
RS F + + +V GTG +E G +R+ +VPL + +
Sbjct: 34 LDRSNFAVEMHQAFLDLVVAGTGVLLVEEAP--PGALSALRFTAVPLREAVLEEGESGRL 91
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK 232
D++YR I +++ VL + + E R ++ AV+P ++G
Sbjct: 92 DTIYRAMALEAAAIAARYPGAVLPPGLGAGSPAQEAPRHRVVEAVWP--------ERGGS 143
Query: 233 GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ + E + P+I R+ E YGR P M+ALP IR N+ V +
Sbjct: 144 AYLAVLEHDGRAWPLAEGRFQDSPFIAFRWLKAPGEAYGRGPVMKALPDIRTANKVVELV 203
Query: 293 AQFGRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
+ ++ A + L PG + A G + GN L
Sbjct: 204 LKNASIAATGIWQAEDDGVLNPATVRLVPGAIIPKAPGSSGLTPLAA--PGNFDVSQLVL 261
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
+ L+ IR+ L D A+ +A E +E++ + +G G LQ+E + +I R
Sbjct: 262 DDLRGRIRAALLADRLGPP-GTAAMTATEVLERSAQTARLLGATYGRLQAELLTPLIGRC 320
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
L IL +G +P ++ Y SPL + Q A+ L + V
Sbjct: 321 LSILRRRGEVPP----LLLDGREARLTYHSPLARVQGRSDAANTLLFLQAVA 368
>gi|325971684|ref|YP_004247875.1| hypothetical protein SpiBuddy_1857 [Spirochaeta sp. Buddy]
gi|324026922|gb|ADY13681.1| hypothetical protein SpiBuddy_1857 [Spirochaeta sp. Buddy]
Length = 571
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 98/526 (18%), Positives = 197/526 (37%), Gaps = 30/526 (5%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNY-WMEELT-------GFLYPYKNNAQLRMWDTTGSEA 53
+ AK I +++ LK R + E F +++++T+G A
Sbjct: 27 DDPLAKAIAAKWSRLKTLRQKTEALRWEACAFVQHRMNEFSDSNNPIKPVKLYNTSGILA 86
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
+ + P +W L + ++ + ++ + +F E
Sbjct: 87 LDTFINGYHGNLITPSMRWFKLTLTGENFE-----DSDTIHGANDYMEISETQMFA--EL 139
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+++ F + V GT ++ DV+ + ++ + ++ N +D
Sbjct: 140 NKTNFYPLDKLATKDAVVQGTSAEWVYDDVESGTCV----FETIAPWDFWIDKNANGKID 195
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK---- 229
+++ FT T + ++ DK + ++ + + A+YP+ +K K
Sbjct: 196 TIFIRFTMTSADALDRFKDKTPPNILRDVETDAGHNEHEFVLAIYPRKKLRSEKGKVLIS 255
Query: 230 GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
K F + E+ EE FP V + YG M+ L ++RLN
Sbjct: 256 TEKPFAAVTYYPVEDCIVEESGYDDFPVAVHVFEQDGTSAYGMGLVMKYLTELKRLNSMS 315
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQ-FGNPLPYHE 348
+ + + PP K R F PG N + Q VQ G +
Sbjct: 316 RDHLETVQKVAKPPMSIPESLKGR-FSGDPGARNYMGNMDAKPEIIQTVQDIGW---LSQ 371
Query: 349 ELNRLKESIRSLFLLDLFQ-VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
E+ L+E I LF DLF ++ +A ++ E+ A + ++G Q I ++
Sbjct: 372 EITELEEKIGRLFFNDLFNYLMRQDKVLTATQTQAIKSEELALLASILGTTQYMKINPIV 431
Query: 408 SRELDILDSQGNLPECEGAD-NPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
R I+ LP+ +L++++ PL K + ++ LQ ++
Sbjct: 432 KRVFRIMVKGNRLPKPPKELLRIKNALMRIDLDGPLAKNVKMFAMQDGLQASLEWMQALH 491
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREV 512
+ +D+++TD R + A P ++R+ EVE +R+Q++
Sbjct: 492 AMQMTNTLDNINTDIFVRKAFIAAGMPQSVLRELGEVEQMRKQKQA 537
>gi|307946242|ref|ZP_07661577.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307769906|gb|EFO29132.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 519
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 85/525 (16%), Positives = 174/525 (33%), Gaps = 37/525 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK---------NNAQLRMWDTTGS 51
M SA ++ R N + +R ++E + P++ + ++D T
Sbjct: 1 MVDLSA--LKKRRNGAQRERDAFQPLLDEAYQYAIPFRKSAAKTGKGDKRVNDVFDHTAI 58
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
++ + + + + P GQ L ++ K+ + ++ + F
Sbjct: 59 DSAFRFAGKVQQDLWPAGQDNFELEPGPVVL------DENERDKMSKQLAPISKIVQAF- 111
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
F + DE ISVP+ + + N
Sbjct: 112 -FDDGDFDMAFHEMALDLSAGNGAMLLNPPGPDEPEKLWEP--ISVPIEELLIENGPNNR 168
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGN 231
+ +++ + +V + W + +K L + D
Sbjct: 169 ISAIFWKRKMSVRVLQDTWPEGKFGENLKKLLKEKPEGEIDV--------NVDTVWVPKE 220
Query: 232 KGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
+ + + + + T P++ RY E YGR P M A+PTI+ LN
Sbjct: 221 RRWRMIVWCNKQETAVFQNESRTCPWLFARYFRVPGEAYGRGPVMLAMPTIKTLNTAARL 280
Query: 292 LAQFGRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPY-HE 348
Q +++ V + L+PG A + L +
Sbjct: 281 QLQAAAIAMLGIYTTVDDGVFNPDLASLEPGAFWKVARNGGALGPSINRFPDPRLDLSNL 340
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
LN ++ ++ ++D D A RSA E +E+ + + G L E + +
Sbjct: 341 VLNDMRMGVK-ATMMDQSLPADGAAVRSATEILERVKRLASDHLGAYGRLVKEIVIPAVK 399
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
R ++I ++G + L++V SPL ++A+ V +Q + V+ +G
Sbjct: 400 RAMEIAYNKGLI---SDEIPIDQLLVRVRVKSPLALAREAQRVEKVIQWLQMVISIGAAV 456
Query: 469 GDPSCMDHM-DTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREV 512
G P + + + P + I E E+ ++Q +
Sbjct: 457 GQPGFLQQIAKVETALTQIGRDLGVPEMFIVSEKEREEKKKQDQD 501
>gi|254505325|ref|ZP_05117473.1| hypothetical protein SADFL11_PLAS23 [Labrenzia alexandrii DFL-11]
gi|222436169|gb|EEE42851.1| hypothetical protein SADFL11_PLAS23 [Labrenzia alexandrii DFL-11]
Length = 490
Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats.
Identities = 71/521 (13%), Positives = 149/521 (28%), Gaps = 61/521 (11%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKL 57
K +++R+ L+ +R + P + + + G+ + L
Sbjct: 1 MKSLKERYQNLQIKREPFLKRARDCAALTIPTLLPPEGHNATSKLPQPYQGLGARCVVTL 60
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
+S + P GQ + GL E + + T+ + +E +
Sbjct: 61 ASRMLVAFIPTGQPFFGLEVPPELLLQEGLMEAPPDLE--KGFALATNLIT--KEIEKKA 116
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ +V G D L + + + +
Sbjct: 117 WRKPTSLTLELLVSTGNALERYMPDNS---------IRVYRLDQYVVVRDLSGNLVELIL 167
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
L + +S L ++ + I +
Sbjct: 168 REKVN---------KASLPEQTQSYLKASQEDDVEIFTC------------AKRHPDGWE 206
Query: 238 FVSVDENRFFEEKQ--IATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
E + E T P+ R+ E YGR E + L+ +
Sbjct: 207 IKQEVEGQIIEGMGGVTPTNPFNPLRWSAVPGEDYGRGKVEEHFSDLTYLDLLSKSMVDG 266
Query: 296 GRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLF---QPVQFGNPLPYHEELNR 352
++ T+ A N + G + Q +E+ R
Sbjct: 267 SAMATRHITMVRPNAAGSNLRKRFAEAKNGDVISGNPEDVDLKQFANVTGMQIAQQEIAR 326
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
+ + + FLL ++ + +A E E + +G + L + + A I +
Sbjct: 327 ITQELAQAFLL-SSSMIRNAERVTAQEVRMIAEELESVLGGVYSYLSQDMMSARIEALMT 385
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
+ + G LP PV + +E L + + V + LQ + + P
Sbjct: 386 SMMAAGQLPPVLQ-MTQPVLTVGLE---ALERDKDVMRVQTVLQTLQAL--------PPD 433
Query: 473 CMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQ 513
+D++D + + + P ++ E + RQQR +
Sbjct: 434 FLDYLDIPDLLKTFMIGLGLPGK-VKTEQEAQQTRQQRLMA 473
>gi|281416306|ref|YP_003347546.1| head-to-tail joining protein [Klebsiella phage KP32]
gi|262410425|gb|ACY66690.1| head-to-tail joining protein [Klebsiella phage KP32]
Length = 461
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 68/496 (13%), Positives = 131/496 (26%), Gaps = 41/496 (8%)
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P W L S + L + KV E V + + E + +
Sbjct: 1 MLALFPMQS-WMKLTISEYEAKNLLG-DAEGLAKVDEGLSMVERIIMNYIESN--SYRVT 56
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTF 181
L + G Y+ L++ + + V +
Sbjct: 57 LFECLKQLCVAGNALLYLPEPEGYTP------MKLYRLNSYVVQRDAFGNVLQIVTLDKI 110
Query: 182 TVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSV 241
+ + V S + + E+ + VY D
Sbjct: 111 AFNA----LPEDVRSQVEAAQGEQKEDAEIDVYTHVYLNEAGDGYSKYEE------VAEE 160
Query: 242 DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLH 301
E + PYI R E YGRS E L ++ L + + ++
Sbjct: 161 VVPGSEAEYPLEECPYIPVRMVRIDGESYGRSYVEEYLGDLKSLENLQESIVKMAMITAK 220
Query: 302 PPTIAVSEAKQRNFDLKPGY-MNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
+ + L ++ Q + G+ + ++ +
Sbjct: 221 VIGLVDPAGITQVRRLTAAQSGAFVPGRKQDIEFLQLEKSGDFTVAKNVSDTIEARLSYA 280
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
F+L V +A E E +G + L E ++ L L + +
Sbjct: 281 FML-NSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLLKQLQATQQI 339
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
PE P +E + + + + + L GD D ++
Sbjct: 340 PELPKEAVEPTISTGLEAIG------RGQDLDKLERCIAAWSALKALEGD----DDLNLA 389
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
+ A + +E + +M +Q Q QQ + +G A +
Sbjct: 390 NLKLRIANAIGLDT---------AGMLLTQEQKNALMAQQGAQIATQQGAAALGQGIATQ 440
Query: 541 AMEKKLTHDMMENSYG 556
A +S G
Sbjct: 441 ATASPEAMAAAADSVG 456
>gi|253583086|ref|ZP_04860294.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251834978|gb|EES63531.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 517
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 92/522 (17%), Positives = 183/522 (35%), Gaps = 46/522 (8%)
Query: 20 RGELNYWMEELTGFLYPYKNNAQLRM--------WDTTGSEACIKLSSLLSSLITPPGQK 71
+ ++ E+ + P + ++ +++ S+A + +S + +K
Sbjct: 23 KSKIEPLYNEILAYTDPMNSVTTSKLEGTLEGTYVNSSISDAQTSFKNFISYALFGIKKK 82
Query: 72 WHGLAESFSAYQA--FLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSV 129
W + + +E D TD +F + S + + T
Sbjct: 83 WAKSDVIKPLLAKKYQGQELIDMIQSYKEKLDVQTDEIFDY--ILASNYEKEIGRALTDW 140
Query: 130 VEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR-EFTFTVDQIVS 188
E GTGC+ E + + R+ VPL+ + + + Q+ + V+R F +++ I S
Sbjct: 141 GELGTGCWKYEE---QNSEKVPFRHQYVPLNELLFNEDLQHRPNIVFRYNFKYSLWDIRS 197
Query: 189 KWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFE 248
+ LS NENE T+I V P + TD F +
Sbjct: 198 LYKKADLSC----YDGINENEEVTVIECVMPVAETDT--------FEWILFDERMDNVLY 245
Query: 249 EKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTI-AV 307
K PY + R+ V + ++GR + L RL N A+ + PP +
Sbjct: 246 RKIYNYNPYTIFRFTVMPNNVWGRGLGVTCLDYYERLCYCENLRARQSIRIVEPPLLLVG 305
Query: 308 SEAKQRNFDLKPGYMNIGALSREGRSLFQPVQF-GNPLPYHEELNRLKESIRSLFLLDLF 366
+ FDL P +N G G++ P+ G LP +++ R + I+++ +
Sbjct: 306 DKRLIDGFDLDPNGLNWGGDGITGQANAVPMNTTGTLLPLDQDIQRYTQVIQAIHFNNPM 365
Query: 367 QVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGA 426
++++ +R AE + + L E + ++ IL + + + +
Sbjct: 366 GSVENRTTRGNAEMGYRMQLFNQKFSDATSNLYDEVLIPTFAKPKQILQDKNIVKKIDED 425
Query: 427 DNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFS 486
+ ++ + L + E + + TV ++ D F
Sbjct: 426 -----KYFQAKFVNLLTETVDMEEIQKLSTYIQTV----QGFYPEVRTATLNKDNTLNFI 476
Query: 487 LWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
P L ++QR+ +M +Q LQ Q
Sbjct: 477 ADTFTVPVYL-------RATKEQRQESEEMMMKQALQMQAVA 511
>gi|315518948|dbj|BAJ51825.1| putative head to tail joining protein [Ralstonia phage RSB2]
Length = 531
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 75/559 (13%), Positives = 155/559 (27%), Gaps = 61/559 (10%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+ L+N R E+ + P + + + G+ L++ L
Sbjct: 19 YTRLENDRAPYITRAEKNAQYTIPSLFPKSSDNYSTDYPTPYQSVGARGLNNLAAKLVLS 78
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREW---CDQVTDTLFGFRERSRSGFVGC 121
+ P G+ +H L S + + V + E +G
Sbjct: 79 LIPVGEPFHRLTISEFDVKETAGGTGEEGSVMERAQVGLSMVERIITAHGE--SAGLRPM 136
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTF 181
++ G G + + L N + + V +
Sbjct: 137 ASELMKQLLVAGNGLVCLPPQE--------VACKLYKLHNFVVERDSVGNVLQTIAK-DV 187
Query: 182 TVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSV 241
T + + L N T+ Y +D+ + +
Sbjct: 188 TAYVALPEEVKAALPEG-----DYQPNSPITMYTHCYRDLESDQWLA------YQEVEGE 236
Query: 242 DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLH 301
PYI R + E YGRS E + + L + QF
Sbjct: 237 VIPGSENTYPKEGNPYIPIRMYKQDGENYGRSFVEEYIGDLVSLENISKAIVQFAIACSK 296
Query: 302 PPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE---LNRLKESIR 358
+ + + G + + Q + + +++ +
Sbjct: 297 ILFLVKPGSSTSVRRVAKAAS--GDFVPGKKEDIEVFQMEKFADFQTAKSVADGIEQRLS 354
Query: 359 SLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQG 418
FLL+ V +A E + E + +G + L +EF ++ R L L + G
Sbjct: 355 FAFLLNSS-VQRSGERVTAEEIRFVSAELESTLGGVYSVLATEFQLPIVRRWLIDLQATG 413
Query: 419 NLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMD 478
+P+ P + ++ + + Q +A+ + + +D
Sbjct: 414 KIPDLPTEALKPQIITGID---AIGRGQDQAKLAAFQSLIQ--------PFVQRVSNRVD 462
Query: 479 TDRVSRFSLWATNT-PAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKA 537
D + + A+ PA LI + + ++ + Q L Q GA A
Sbjct: 463 WDGLLLKAANASGLDPAGLILTD----------QQMQARATQEGITQGLVQGGASAGATA 512
Query: 538 AGRAMEKKLTHDMMENSYG 556
+ ++ + G
Sbjct: 513 GQGMGAAMTDPEGIQQALG 531
>gi|167565008|ref|ZP_02357924.1| head-to-tail joining protein [Burkholderia oklahomensis EO147]
Length = 509
Score = 210 bits (533), Expect = 6e-52, Method: Composition-based stats.
Identities = 79/556 (14%), Positives = 153/556 (27%), Gaps = 64/556 (11%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPY----KNNAQLRM----WDTTGSEACIKLSSL 60
++DR+ L R + P ++ + + G +SS
Sbjct: 4 LKDRYQELVPDRDPYFRRAQACAALTVPSVCPPDGQTSQQILPQSYTSFGHRGATNVSSK 63
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
L PPG + S + ++ + Q + + +
Sbjct: 64 LMMAFMPPGDSAFNIEVSTQVLLQEG--VLSPPPEIVKGLAQCEQLINA--KIEALNWRR 119
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+V G Y++ D R LS + V
Sbjct: 120 QTYLSLLHLVVAGNVGEYIQPDG---------RLKIFSLSQFVCVRDFNGRVMEAVTAEK 170
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
V + L ++ A+ E E T+ + D+ H
Sbjct: 171 LKVRE---------LPKDLQRVTAKKEREDVTLYT-------RFEWVDENRYAVHQDLDD 214
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
+ E I P+ + + E YGRS + + L++T +L + G ++
Sbjct: 215 AVVKPYQEYNGI--MPFNALAWELVPGESYGRSHVEQNYSDLIALDKTSQQLLECGAIAA 272
Query: 301 HPPTIAVSE---AKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH---EELNRLK 354
R ++ ++ + + QP QF N E LK
Sbjct: 273 RNLIFVAPNAAGGNLRKRIMEARNGSVISARGGTQGDVQPFQFNNMAAMQSLNAEKQDLK 332
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
+ FLL + D +A E E +G + L E IG + + + +
Sbjct: 333 RDLAVAFLLTN-DLRRDAERVTAYELQMLVTEIEQSLGGVYSYLGPEMIGWRLKKLVAQM 391
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
S+ LP+ + L K + + V S L +N +
Sbjct: 392 QSKDELPKIGKDSTQITVTTGLA---ALGKDAKLKKVHSFLSLLNETPQAFQ----QEAA 444
Query: 475 DHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIG 534
++ D + + A P + + + ++ Q ++
Sbjct: 445 AYVKFDTILTPAAAALGFPQSI-----------KTAQEVQQEQAAAQEQAMQADMARAAA 493
Query: 535 AKAAGRAMEKKLTHDM 550
AG+ L
Sbjct: 494 GPVAGQIAANTLAPAQ 509
>gi|291335778|gb|ADD95380.1| hypothetical protein [uncultured phage MedDCM-OCT-S05-C429]
Length = 315
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 48/325 (14%), Positives = 96/325 (29%), Gaps = 22/325 (6%)
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
G +H + + P++V + E YGR E L ++ L
Sbjct: 3 NGRWVWHQEVLDKIIPNTRSTAPKNASPWLVLTFNSVDGEQYGRGRVEEFLGDLKSLEGL 62
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
L + + + + + + GA+ + Q VQ G +
Sbjct: 63 SQALVEGAAAASKVIFLVSPSSTTKPATIAKAG--NGAIVQGRAEDVQVVQVGKTADFST 120
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
N + R L L + + +A E E +G + L F+ +
Sbjct: 121 AANMSQTIERRLLEAFLVMNVRNAERVTAEEVRLTQLELEQQLGGIFSLLTVSFLIPYLD 180
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
R L +L LP+ P V + L + Q E++ + +
Sbjct: 181 RTLLVLQRTNELPKLPKDIIRPTI---VAGVNALGRGQDREALT------QFMGTIAQTI 231
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
G + ++ + A L++ ++ +++ QQ Q
Sbjct: 232 GPEALGQFINPLEAIKRLAAAQGIDVLNLVKTQEQLAGEKEE----------AMQMQQQQ 281
Query: 528 QTSQDIGAKAAGRAMEKKLTHDMME 552
G A + + + MM+
Sbjct: 282 TLLNQAGQFANSKLADTENMQGMMQ 306
>gi|125999995|ref|YP_001039666.1| head portal-like protein [Erwinia amylovora phage Era103]
gi|121621851|gb|ABM63425.1| head portal-like protein [Enterobacteria phage Era103]
Length = 517
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 60/536 (11%), Positives = 145/536 (27%), Gaps = 42/536 (7%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLSSL 60
I + L +R E + F PY + + W G+ A LS+
Sbjct: 10 SKIPKLYEQLVGKRSPFLSRAENYSRFTLPYLMADVNDDLSSQNAWQDDGASATNFLSNK 69
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LS ++ P + + + + + E ++ V + E + F
Sbjct: 70 LSQVLFPAQRSFFRIDLTPEGIKQL-DNEAMTQSTAQKLLSDVEKAAMLYGESLQ--FRP 126
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ + ++ G Y I +VPL + + ++ V +
Sbjct: 127 AVVEAFKHLIVTGNVMMY------HPDKTSPI--QAVPLHHYCVRRDNNGTVLDIV---F 175
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
+ + ++ + + +++ ++ ++ K + +
Sbjct: 176 LQEKALETFEPSIRMAIQASRKGKQYKDKDNVKLYTHAKRTKDGKYLIRQSADDVPVGKE 235
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
P+++ ++ E YGR A + + LA+ L
Sbjct: 236 STVTE-------DKSPFLILTWKRSYGEDYGRGMAEDHAGAFFVIQFLSEALARGMALMA 288
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALS-REGRSLFQPVQFGNPLPYHEELNRLKESIRS 359
+ + G + Q ++ + P LN ++ I
Sbjct: 289 DVKYLVKPGSYTDINQFVEGGSGAVLHGVEGDIHIVQLGKYADYTPIQAVLNDYRQRIGR 348
Query: 360 LFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGN 419
+F+++ D +A E +G + + F G L G
Sbjct: 349 VFMMEAMTR-RDAERVTAYEIQRDAMLVEQSLGGVYSLFATTFQGP-----LARWFMNGI 402
Query: 420 LPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDT 479
+ P L +E L + + + + + V+ + +
Sbjct: 403 SSILTSKNVSPTILTGIE---ALGRMAELDKLGTFNGYVSMTAQW-----PEPLQQAIKW 454
Query: 480 DRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGA 535
+ + + + E+ Q ++ Q + G
Sbjct: 455 PDFTDWVQGQISANFPFFKTQDELNAEAQAQQEQEATKYAAEQAGKAIPDMVKNGQ 510
>gi|311875235|emb|CBX44494.1| bacteriophage head-to-tail connecting protein [Erwinia phage
phiEa1H]
gi|311875356|emb|CBX45097.1| head-to-tail connecting protein [Erwinia phage phiEa100]
Length = 517
Score = 207 bits (527), Expect = 4e-51, Method: Composition-based stats.
Identities = 59/536 (11%), Positives = 145/536 (27%), Gaps = 42/536 (7%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLSSL 60
I + L +R E + F PY + + W G+ A LS+
Sbjct: 10 SKIPKLYEQLVGKRSPFLSRAENYSRFTLPYLMADVNDDLSSQNAWQDDGASATNFLSNK 69
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LS ++ P + + + + + E ++ V + E + F
Sbjct: 70 LSQVLFPAQRSFFRIDLTPEGIKQL-DNEAMTQSTAQKLLSDVEKAAMLYGESLQ--FRP 126
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ + ++ G Y I +VPL + + ++ + +
Sbjct: 127 AVVEAFKHLIVTGNVMMY------HPDKTSPI--QAVPLHHYCVRRDNNGTILDIV---F 175
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
+ + ++ + + +++ ++ ++ K + +
Sbjct: 176 LQEKALETFEPSIRMAIQASRKGKQYKDKDNVKLYTHAKRTKDGKYLIRQSADDVPVGKE 235
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
P+++ ++ E YGR A + + LA+ L
Sbjct: 236 STVTE-------DKSPFLILTWKRSYGEDYGRGMAEDHAGAFFVIQFLSEALARGMALMA 288
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALS-REGRSLFQPVQFGNPLPYHEELNRLKESIRS 359
+ + G + Q ++ + P LN ++ I
Sbjct: 289 DVKYLVKPGSYTDINQFVEGGSGAVLHGVEGDIHIVQLGKYADYTPIQAVLNDYRQRIGR 348
Query: 360 LFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGN 419
+F+++ D +A E +G + + F G L G
Sbjct: 349 VFMMEAMTR-RDAERVTAYEIQRDAMLVEQSLGGVYSLFATTFQGP-----LARWFMNGI 402
Query: 420 LPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDT 479
+ P L +E L + + + + + V+ + +
Sbjct: 403 SSILTSKNVSPTILTGIE---ALGRMAELDKLGTFNGYVSMTAQW-----PEPLQQAIKW 454
Query: 480 DRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGA 535
+ + + + E+ Q ++ Q + G
Sbjct: 455 PDFTDWVQGQISANFPFFKTQDELNAEAQAQQEQEATKYAAEQAGKAIPDMVKNGQ 510
>gi|167841465|ref|ZP_02468149.1| head-to-tail joining protein [Burkholderia thailandensis MSMB43]
Length = 519
Score = 206 bits (525), Expect = 6e-51, Method: Composition-based stats.
Identities = 58/506 (11%), Positives = 138/506 (27%), Gaps = 39/506 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY---------KNNAQLRMWDTTGSEACIKLSSLLSS 63
+ L R L E+ + F P + + + G++ L++ L
Sbjct: 9 WESLAGLRRPLLTRCEKYSAFTLPTIITPQGYNEELEELQTDFQSVGAQGVNNLANKLML 68
Query: 64 LITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQ 123
+ P + + + + D + + ++E + R G L
Sbjct: 69 ALFAPSRPFFRYQVAAALMNQLKQTLDVQEQDLQEMLAEGERNC--IRTLDAMGVRPKLY 126
Query: 124 SFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTV 183
++ G + D + + L + + + + T
Sbjct: 127 EAMKHLIITGNCLLILGDDPKDTP------MRVLSLKRYAVKRSMSGKLLQLIIHETVRF 180
Query: 184 DQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDE 243
D++ + + S + A + + D H
Sbjct: 181 DELDDEVQKIAVESSSRYANVDPNDPNSCPEVKYFTWVRWDG--TANYIVTHHVDNVELP 238
Query: 244 NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPP 303
+F + PYI + + D YG + + L+ + L+
Sbjct: 239 AKFSGKYTDQDLPYIPLTWELHDDNDYGTGLVEQMAGDLAALSALSEAEVKGAILASEFR 298
Query: 304 TIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH---EELNRLKESIRSL 360
+ + R D+ + GA + P+ G + I
Sbjct: 299 WLVNPAGQTRPADI--ADSDNGAALPGTKDDVVPLNSGTGQAMQYIDTVATKYVNRIGRN 356
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLL ++ D +A E + E +G + L +F M + G
Sbjct: 357 FLL-SSSIVRDAERVTAEEIRMQANELETSLGGVYSRLAVDFQKPM---AYWLTKRAGV- 411
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
+ G D P+ + ++ S + + + + + + P + ++
Sbjct: 412 -QLAGKDIEPMVITGLDALS------RNGDLDNLKLALQDLAAVSGM--PPQALAVLNLT 462
Query: 481 RVSRFSLWATNTP-AVLIRDTAEVED 505
+++ A ++ +
Sbjct: 463 AIAKAIFMGRGVTMADYVKSQEQQAA 488
>gi|259419010|ref|ZP_05742927.1| hypothetical protein SCH4B_4395 [Silicibacter sp. TrichCH4B]
gi|259345232|gb|EEW57086.1| hypothetical protein SCH4B_4395 [Silicibacter sp. TrichCH4B]
Length = 506
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 74/512 (14%), Positives = 157/512 (30%), Gaps = 35/512 (6%)
Query: 8 DIQDRFNYLKNQRGEL-NYWMEELTGFLYPYKNNAQLR----------MWDTTGSEACIK 56
+ RF+ K+ R + E+ F + + ++ T E +
Sbjct: 4 EFDRRFSVAKSHRKQHVEEDGREVYKFCFNGREREWDNNSSYKDEPEEIFVETPGEVAEE 63
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
S L S +TP W + + +++ + + S
Sbjct: 64 FSGDLFSTMTPENSPWSEFEAGNAVDEDDEAAAKEELEELEKAISK---------SLRSS 114
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
+ + + G ++ D L I + +VP+ +Y++ + D +
Sbjct: 115 NYYDEGPTAFQD-AVVGNVAMWV----DRPTLNGAINFEAVPIPQLYVTPGPLGIEDR-F 168
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHS 236
R F + + D ++ + ++ N ++H + + ++
Sbjct: 169 RRQRFHYRNLKVLFPDAKFPRAIEDKIKKSSNALAVVVHGFWRTFEDVENPVWRHEIRVD 228
Query: 237 KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
+ + +VGR+ A +GR P + LP R+ +E V +
Sbjct: 229 GKPIGLDKDVGSIGAVN---LVVGRFNPYAGSAWGRGPGRKLLPVFRQYDELVRMNMEGL 285
Query: 297 RLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKES 356
+L PP + + + QPV FG +L++
Sbjct: 286 DRTLDPPFTYPHDGMLDLSQGLENGVGY-PTMPGTKDALQPVLFGTLDYGFFSEEKLEQK 344
Query: 357 IRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDS 416
IR F + K SA++ + + ++ + EF ++SR +
Sbjct: 345 IRDGFYREKE--QAGKTPPSASQYIGQENKQVRRMARPATKTWREFGVGLLSRVEWLERQ 402
Query: 417 QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDH 476
G E ++ SPL + Q + V +A + + + G
Sbjct: 403 PGGSLEGAELPLIDSGVVNARPISPLERAQAMQDVTTADMIIGMIN---ERLGPEQAAML 459
Query: 477 MDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+ R V R AE+E + +
Sbjct: 460 IKGTDTYRKIKEVLKDQIVEFRSEAEIEALIK 491
>gi|108862014|ref|YP_654130.1| 29 [Enterobacteria phage K1-5]
gi|40787100|gb|AAR90071.1| 29 [Enterobacteria phage K1-5]
Length = 516
Score = 197 bits (500), Expect = 5e-48, Method: Composition-based stats.
Identities = 55/488 (11%), Positives = 139/488 (28%), Gaps = 45/488 (9%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLSSL 60
I + N+R + + PY N W G++A L++
Sbjct: 14 SKIPKLWEKFSNKRSSFLDRAKHYSKLTLPYLMNDKGDNETSQNGWQGVGAQATNHLANK 73
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
L+ ++ P + + + + + + + ++ QV +E + F
Sbjct: 74 LAQVLFPAQRSFFRVDLTAQGEKVLNQRGLKK-TELATIFAQVETR--AMKELEQRQFRP 130
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ + ++ G+ Y + ++P+ + ++ + + +
Sbjct: 131 AVVEAFKHLIVAGSCMLYKPSKGA---------ISAIPMHHYVVNRDTNGDLLDIILLQE 181
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGNKGFHSKFV 239
+ V+ +K + ++ HA Y + K+ +
Sbjct: 182 KALRTFDPAT-RAVVEVGLKGKKCKEDDSVKLYTHAKYLGDGFWELKQSADDIPVGKVSK 240
Query: 240 SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLS 299
E P+I ++ E +GR A + + + +A+ L
Sbjct: 241 IKSEK----------LPFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEAVARGAALM 290
Query: 300 LHPPTIAVSEAKQRNFDLKP-GYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIR 358
+ A+ G + E + Q ++ + P L I
Sbjct: 291 ADIKYLIRPGAQTDVDHFVNSGTGEVVTGVEEDIHIVQLGKYADLTPISAVLEVYTRRIG 350
Query: 359 SLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQG 418
+F+++ D +A E E +G + + + + L G
Sbjct: 351 VVFMMETMTR-RDAERVTAVEIQRDALEIEQNMGGVYSLFATTMQSPV---AMWGLLEAG 406
Query: 419 NLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMD 478
PV + +E L + + + +A+ Q ++ + +
Sbjct: 407 E--SFTSDLVDPVIITGIE---ALGRMAELDKLANFAQYMSL-----PLQWPEPVLAAVK 456
Query: 479 TDRVSRFS 486
+
Sbjct: 457 WPDYMDWV 464
>gi|83571754|ref|YP_425006.1| putative head-tail connector [Enterobacteria phage K1E]
gi|83308205|emb|CAJ29437.1| gp29 protein [Enterobacteria phage K1E]
Length = 516
Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 52/487 (10%), Positives = 138/487 (28%), Gaps = 43/487 (8%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLSSL 60
I + +R + + PY N W G++A L++
Sbjct: 14 SKIPKLWEKFSTKRSSFLDRAKHYSKLTLPYLMNDKGDNETSQNGWQGVGAQATNHLANK 73
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
L+ ++ P + + + + + + + ++ QV +E + F
Sbjct: 74 LAQVLFPAQRSFFRVDLTAQGEKVLNQRGLKK-TELATIFAQVETR--AMKELEQRQFRP 130
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ + ++ G+ Y + ++P+ + ++ + + +
Sbjct: 131 AVVEAFKHLIVAGSCMLYKPSKGA---------ISAIPMHHYVVNRDTNGDLLDIILLQE 181
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
++ + + + E +I K +G
Sbjct: 182 KSLRT----FDPATRAVVEVGLKGKKCKEDDSI-----KLYTHAKYLGEGFWELKQSADD 232
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
+ + + K P+I ++ E +GR A + + + +A+ L
Sbjct: 233 IPVGKVSKIK-SEKLPFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEAVARGAALMA 291
Query: 301 HPPTIAVSEAKQRNFDLKP-GYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRS 359
+ A+ G + E + Q ++ + P L I
Sbjct: 292 DIKYLIRPGAQTDVDHFVNSGTGEVVTGVEEDIHIVQLGKYADLTPISAVLEVYTRRIGV 351
Query: 360 LFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGN 419
+F+++ D +A E E +G + + + + L G+
Sbjct: 352 VFMMETMTR-RDAERVTAVEIQRDALEIEQNMGGVYSLFATTMQSPV---AMWGLLEAGD 407
Query: 420 LPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDT 479
PV + +E L + + + +A+ Q ++ + +
Sbjct: 408 --SFTSDLVDPVIITGIE---ALGRMAELDKLANFAQYMSL-----PLQWPEPVLAAVKW 457
Query: 480 DRVSRFS 486
+
Sbjct: 458 PDYMDWV 464
>gi|31711672|ref|NP_853590.1| head portal protein [Enterobacteria phage SP6]
gi|31505676|gb|AAP48769.1| gp30 [Enterobacteria phage SP6]
gi|40787047|gb|AAR90021.1| 29 [Enterobacteria phage SP6]
Length = 515
Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats.
Identities = 55/489 (11%), Positives = 138/489 (28%), Gaps = 47/489 (9%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLSSL 60
I + +R + PY N W G++A L++
Sbjct: 13 SKIPKLWEKFSKKRSPYLDRAKHFAKLTLPYLMNNKGDNETSQNGWQGVGAQATNHLANK 72
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
L+ ++ P + + + + + + L + ++ +V T + + F
Sbjct: 73 LAQVLFPAQRSFFRVDLT-AKGEKVLDDRGLKKTQLATIFARVETT--AMKALEQRQFRP 129
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ + ++ G Y + +VP+ + ++ + + V
Sbjct: 130 AIVEVFKHLIVAGNCLLYKPSKGA---------MSAVPMHHYVVNRDTNGDLMDVI---- 176
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
++ + + + + E +GF S
Sbjct: 177 LLQEKALRTFDPATRMAIEVGMKGKKCKED--------DNVKLYTHAQYAGEGFWKINQS 228
Query: 241 VDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRL 298
D+ +E +I + P+I ++ E +GR A + + + +A+ L
Sbjct: 229 ADDIPVGKESRIKSEKLPFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEAMARGAAL 288
Query: 299 SLHPPTIAVSEAKQRNFDLKP-GYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
+ ++ G + E + Q ++ + P L I
Sbjct: 289 MADIKYLIRPGSQTDVDHFVNSGTGEVITGVAEDIHIVQLGKYADLTPISAVLEVYTRRI 348
Query: 358 RSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
+F+++ D +A E E +G + + + L
Sbjct: 349 GVIFMMETMTR-RDAERVTAVEIQRDALEIEQNMGGVYSLFAMTMQTPI---AMWGLQEA 404
Query: 418 GNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
G+ PV + +E L + + + +A+ Q ++ +
Sbjct: 405 GD--SFTSELVDPVIVTGIE---ALGRMAELDKLANFAQYMSLPQTW-----PEPAQRAI 454
Query: 478 DTDRVSRFS 486
+
Sbjct: 455 RWGDYMDWV 463
>gi|13186164|emb|CAC33475.1| hypothetical protein [Legionella pneumophila]
Length = 519
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 80/501 (15%), Positives = 172/501 (34%), Gaps = 48/501 (9%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY---------------KNNAQLRMWD 47
+ + N K+ ++ + P ++D
Sbjct: 27 KLDVNRLCRMRNDAKSDLDMWRSILQTAYHYSMPDYNPFENYGLAGFLTPGQQYNADIYD 86
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
T A +L+ + + P GQ+W + + D
Sbjct: 87 LTLPIAHKRLADKMLMNMVPQGQQWVKFTPGDEFGEPGTPLYQRALDATQRMTD------ 140
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
F+ RS F + V TG + +E + +RY +VP + V +
Sbjct: 141 HFFKIIDRSNFYLAVGESLQD-VLISTGIIAI----NEGNRKRPVRYEAVPPAQVMFQGD 195
Query: 168 HQNVVDSVYR-EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
+ VD+++R + ++ I S W + + L + ++ I + +K
Sbjct: 196 AEGQVDAIFRDWYQVRIENIKSMWPKAEV-----AKLNKKPEDKVDIWECAWIDYEAPEK 250
Query: 227 KDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLN 286
+ + V E+ +++P++V R R EI GR P++ A PT +N
Sbjct: 251 E------RYQYVVMTSSKDVLLEQSNSSWPWVVYRMRRLTGEIRGRGPSLSAYPTAATIN 304
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNPLP 345
+ + + +P +A S++ P +I + +G +P + +
Sbjct: 305 QALEDELVAAAFQANPMYMAASDSAFNQQTFTPRPGSIVPVQMVQGEWPIKPFEQSGNIQ 364
Query: 346 YHEEL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
++ L N ++ I L + + +R+A E+ + E ++ LQ+EF
Sbjct: 365 FNALLVNDFRQQINELLYAFPLGAV-NSPTRTATEAEIRYTENLESFSAMVPRLQNEFFI 423
Query: 405 AMISRELDILDS-----QGNLPECE--GADNPPVSLLKVEYTSPLFKYQQAESVASALQG 457
+I R L +++ N+P+ + +L + + +PL + A+ L
Sbjct: 424 PVIQRTLWVINKVLPETFANIPDDIRNKMISVDGQILGLSFDTPLMTAKGQVKTAALLGF 483
Query: 458 VNTVVELGVKTGDPSCMDHMD 478
L + + +D +
Sbjct: 484 YQAAASLLGQEAATASLDPVK 504
>gi|320158420|ref|YP_004190798.1| head-to-tail joining protein [Vibrio vulnificus MO6-24/O]
gi|319933732|gb|ADV88595.1| head-to-tail joining protein [Vibrio vulnificus MO6-24/O]
Length = 437
Score = 183 bits (464), Expect = 6e-44, Method: Composition-based stats.
Identities = 63/474 (13%), Positives = 122/474 (25%), Gaps = 43/474 (9%)
Query: 63 SLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCL 122
+ PP + L S D++ + Q + E R L
Sbjct: 1 MALFPPSHPFVRLGVSNELIAKL-DLTDSKKGDLETALSQTEQLI--VTELERRALRSLL 57
Query: 123 QSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFT 182
++ G G Y+ + L + + Q +
Sbjct: 58 YEDIKHLLVTGNGLLYVGSKESRF----------YRLDKYVVERDDQGAPTRIVVCEKIN 107
Query: 183 VDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVD 242
++ + + R + FT+I + + +
Sbjct: 108 FRKLPDAMQFAIREKRRLKGDPRKDLNLFTMIELKGD-----------QWRSYQEVEGMR 156
Query: 243 ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
+ P+IV E YGRS E + + L V + Q +
Sbjct: 157 VPDSESNYRKDRTPWIVCTMNRLDGEDYGRSFCEEHIGDMNTLESLVKAITQASIAASKV 216
Query: 303 PTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN---RLKESIRS 359
+ A R L G + R +Q N ++ +
Sbjct: 217 IFMVKPNASTRASTLSKA--KNGDYIQGDREDVGCLQLDKAHDMAIAQNLKAEIQAGLSE 274
Query: 360 LFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGN 419
FL+ V D +A E T+ +G L L +++ L ++ G
Sbjct: 275 AFLM-SSAVRRDAERVTAEEIRMMTQMLEESLGGLYSQLAQSLQLPLVNVLLGHMERDGI 333
Query: 420 LPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDT 479
LP P+ + VE L + + + + + V V M
Sbjct: 334 LPHFPEGTFEPIVITGVEG---LGREAELSRLNTFVSLVQQVGA-------EQAAKEMHL 383
Query: 480 DRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQD 532
+ + L++ E + Q Q + + + + Q
Sbjct: 384 GELFKRYAANLQIETKGLMKTAEEKQQELQ--AEQMNQIVQTATPEVVHGAMQQ 435
>gi|289976621|gb|ADD21666.1| head-to-tail joining protein [Caulobacter phage Cd1]
Length = 509
Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats.
Identities = 63/501 (12%), Positives = 132/501 (26%), Gaps = 49/501 (9%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYP---------YKNNAQLRMWDTTGSEACIK 56
AK R++ L N+R +E + ++ G +A
Sbjct: 4 AKQASARWSQLDNKRRGFIERLETYASWTIAKLCTPSGYDQNHSELSHGTQAVGGQAVNH 63
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L++ + + P + + L S Q L + + + Q + R
Sbjct: 64 LANKIMLALFAPSRPFFRLDPSD-KMQKELAAANVNEQALALILSQGEKR--AIQALDRM 120
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
L +++ G D + + + + V +
Sbjct: 121 ALRPKLYEAIKNLIVLGNVMLEFTKDT----------MRVIGIKRYCVRRSASGEVLELI 170
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHS 236
+ T D++ + + + + R + ++ + + +
Sbjct: 171 IKDTMQFDEL-----EPSVQEECRRQGMRPLEDAEVSLYRWIVRQDNGDYRMTQH----- 220
Query: 237 KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
+F + P+ V + + D YG + L Q
Sbjct: 221 VDNIELSKKFQGKWSKDKLPFRVLTWDLSDDAHYGTGLVEDYRGDFAGLTMLSTAQVQAA 280
Query: 297 RLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKES 356
LS + + D GA + VQ G L+ E
Sbjct: 281 ILSSEFRWLVNPAGMTKPEDF--RDSENGAAIPGVQGDVSLVQSGKAADLQVILSVNAEY 338
Query: 357 IRSLF--LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
I + L + D +A E + E +G L +F M ++
Sbjct: 339 INRIARGFLMGSAMTRDAERVTAEEIRMQASELETSLGGAYSRLAVDFQIPM---AYWLM 395
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
EG D P + ++ S + + + + V LG T P +
Sbjct: 396 KKVDM--SIEGTDVEPSIVTGLDALS------RGGDLENLKLFLADVAGLG--TLPPPVL 445
Query: 475 DHMDTDRVSRFSLWATNTPAV 495
+ + + A +
Sbjct: 446 AVLKVEPLLAAFATARRIKSS 466
>gi|149408206|ref|YP_001294640.1| hypothetical protein ORF047 [Pseudomonas phage PA11]
Length = 584
Score = 176 bits (447), Expect = 6e-42, Method: Composition-based stats.
Identities = 70/578 (12%), Positives = 159/578 (27%), Gaps = 58/578 (10%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR---MW-DTTGSEAC---- 54
SA+ + ++ NQR + +EL +++ W ++T
Sbjct: 15 DSSAQWVAYLWDRFNNQRRQKIEEWKELRNYVFATDTTTTSNQGLPWKNSTTLPKLCQIR 74
Query: 55 IKLSSLLSSLITPP--GQKWHGLAESFSAYQAFLYKEDARSKKVRE--WCDQVTDTLFGF 110
L S S + P +W G + S + S K RE + +V+ ++ +
Sbjct: 75 DNLHSNYFSSLFPNDDWLRWVGYGKGDSTKTKAKAIQAYMSNKCRESHFRTEVSKLIYDY 134
Query: 111 RERSRSGFVGCLQSF-YTSVVEFGTGCFYMEAD-------------------------VD 144
+ + F Y + + Y+
Sbjct: 135 IDYGNA-FATVSFEAKYKEMTDGTLVPDYIGPRLVRISPLDIVFNPLATSISDTFKIVRS 193
Query: 145 EKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALA 204
K E +R Y + + ++V+ G V +
Sbjct: 194 VKTKGELMRLAQDEPEQSYWLEALKRREEICRHLGGYSVEDFDKAAGFDV--DGFGNLYE 251
Query: 205 RNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRV 264
++ I+ + + + N+ S + + P +R
Sbjct: 252 YYMSDWVEILEFYGDYHDKETGELQTNRIITVVDRSTEVRNESIPTWFGSAPIYHVGWRF 311
Query: 265 RADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNI 324
R D ++ P + R++ N A L + PP + + F PG
Sbjct: 312 RPDNLWAMGPLDNLVGMQYRIDHLENAKADAVDLIIQPPLKII--GEVEEFVWGPGAEIH 369
Query: 325 GALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT 384
+ + + + V + ++ + + + ++A E +
Sbjct: 370 LDQGGDVQEIAKNVNYIINADNQIQMLEDRMEL-YAGAPREAMGIRTPGEKTAFEVQQLG 428
Query: 385 REKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKV-EYTSPLF 443
G + + E + +++ L+ + + L V E+ S
Sbjct: 429 NAAGRIFQEKVTTFEVELLEPVLNAMLETATRN---MDGSDVIRVMDTDLGVKEFMSVTR 485
Query: 444 ---------KYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPA 494
+ A Q + +V + + H ++ F T
Sbjct: 486 EDITANGKIRPIGARHFGKQAQDLQNLVGIFNSQIGQMILPHTSGKALATFVDDVTGLQG 545
Query: 495 -VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQ 531
+ R V + + + + + E+ LQ Q+
Sbjct: 546 YEIFRPNVAVAEQAETQSLVAQAQEDLQLQAQMPAEGA 583
>gi|197935883|ref|YP_002213719.1| head portal-like protein [Ralstonia phage RSB1]
gi|197927046|dbj|BAG70388.1| head portal-like protein [Ralstonia phage RSB1]
Length = 514
Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats.
Identities = 54/517 (10%), Positives = 132/517 (25%), Gaps = 42/517 (8%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+ L + + E + P + + + GSE LS+ L
Sbjct: 12 WTALDGRANTVIRRSERYASWTQPSLCPPDGFNEQTELQNDYQSVGSECVNSLSNRLVLN 71
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P + + + D ++ + + + L
Sbjct: 72 LFAPSRPFMRYDVPPAIAAKL----DIDPAVLQTQLSKAERD--SVKLLDQLSTRPKLFE 125
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G + D +VP+ + + ++ + D
Sbjct: 126 AIKHLIVIGNVLVILGKDKTTP-------LRTVPIKKFRCKRSPSGKLVTLAIKECLKFD 178
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
++ K K+L N + + + +
Sbjct: 179 ELDEKVQQKLLEQSPTKYQFTPNNPPDCEWYTEVCLQPDGRYAVRTQVDDAMLTGHGYDA 238
Query: 245 RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPT 304
+ EE PY V + + YG + ++ Q L+
Sbjct: 239 MYTEE----EMPYRVLTWELPDGWHYGIGLVEQHAGDFAAISTMSASQLQSAILASEFRW 294
Query: 305 IAVSEAKQRNFDLK---PGYMNIGALSREGRSLFQPVQFGNPLPYH-EELNRLKESIRSL 360
+ + D+ G + G+ + L L++ +
Sbjct: 295 LVNPAGITQPEDMVNSQNGDVVPGSPDDVVAVTAATAGVASALQVQDLILSKYVTRVGRA 354
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLL D +A E E +G + L +F + + G
Sbjct: 355 FLLASAA-QRDAERVTAEEIRRDVLELETSLGGVYSRLAVDFQKPL---AYWLARMLGV- 409
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV-KTGDPSCMDHMDT 479
+ P + ++ S + + + ++ + ++ + G ++T
Sbjct: 410 -KLSDTGIQPTIITGLDALS------RNSDLENLMRALQQLLIVSQIVAGGGPLSVTLNT 462
Query: 480 DRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRV 516
++ A + E + ++E R+
Sbjct: 463 TSIAASIFAGNGVDADTYVNDQETQQALMEQEQARQE 499
>gi|294661422|ref|YP_003347633.2| head-tail connector protein [Klebsiella phage KP34]
gi|291195554|gb|ACY66713.2| head-tail connector protein [Klebsiella phage KP34]
Length = 531
Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats.
Identities = 70/506 (13%), Positives = 148/506 (29%), Gaps = 45/506 (8%)
Query: 38 KNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVR 97
+ R + +TG++ ++ + + P G + ++S +
Sbjct: 44 RRRPLERDYQSTGAQLVNTAATKIVGALFPQGTSFFRFSKSSDL--DEFISSLGSAATAE 101
Query: 98 EWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISV 157
+V +T + + G+ L ++ G Y++ + I
Sbjct: 102 SKLAEVENTA-SQKVFEKDGYAAKL-QAVKLLLVTGNALEYIDERTGKS--------IVY 151
Query: 158 PLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAV 217
+ N + + V + +V + + + ++ I A
Sbjct: 152 SVRNFTVRRDGSGNVLRLIIRERASVQDLPESFQNTFYR-------DKDPYGDVDIYTAA 204
Query: 218 YPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIA--TFPYIVGRYRVRADEIYGRSPA 275
K ++ + + D +R + PY V + + + E YGR
Sbjct: 205 CRKVKRTEEGVEVVSY--EVYQEADGHRIGDSSTYPELELPYNVLVWNLVSGEHYGRGLV 262
Query: 276 MEALPTIRRLNETVNEL--AQFGRLSLHPPTIAVSEAKQRNFDLKPGY----MNIGALSR 329
+ RL+ L + L P A S F + G +
Sbjct: 263 EDYAGDFARLSVLSEALTNYEVESARLIPLIDASSGLDVDEFATSETGEAVQVGGGGSNG 322
Query: 330 EGRSLFQPVQFGNPLPYH---EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+S + G+ + L++ + F+ +A E + +E
Sbjct: 323 NSKSPVTAYEGGSAQKIQWIASNIQMLEQKLSRAFMYTG--NSRQGERVTAYEIRQNAKE 380
Query: 387 KGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKV-EYTSPLFKY 445
A +G L ++ R+L L + P + + V + V TS L K
Sbjct: 381 AEAAMGGGFSILSDTWL-----RKLAYLYTALVYPRFKLYLSEGVVSINVTVGTSALAKA 435
Query: 446 QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
A+ + A Q + + + + D + A + T E
Sbjct: 436 AAADKLLEAAQSMQLAIPV-----LEQITPRFNKDACVDWYFDAYGIVSEPFMYTEEQLQ 490
Query: 506 IRQQREVQRRVMEEQHLQQQLQQTSQ 531
+QQ + + Q QLQ +
Sbjct: 491 QKQQVQDASADVSAGAAQDQLQGLTA 516
>gi|291334523|gb|ADD94176.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291334657|gb|ADD94304.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
gi|291334711|gb|ADD94357.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
gi|291336437|gb|ADD95992.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 193
Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 8/189 (4%)
Query: 137 FYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLS 196
++E D E+ +++ + ++ ++++ N + +D+V+R+F+ + ++ K+GD +S
Sbjct: 1 MFIEED-----DEDILKFSTRHINEIFIAENDKGRIDTVFRKFSLSARAVMQKFGD--VS 53
Query: 197 SKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGNKGFHSKFVSVDENRFFEEKQIATF 255
+ + ++ E I+HAVYP+S D K+DK N F S ++ + F
Sbjct: 54 INIATKAKKDPYEEVEIMHAVYPRSDFDPRKQDKENMPFESVYLDAESGDELSVSGFREF 113
Query: 256 PYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF 315
P++V RY + EIYGRSPAM ALP ++ LNE + + + PP + +
Sbjct: 114 PFVVPRYLKASHEIYGRSPAMTALPDVKMLNEMSKTTIKSAQKQVDPPLLVPDDGFMLPV 173
Query: 316 DLKPGYMNI 324
PG +N
Sbjct: 174 RTIPGGLNF 182
>gi|33300841|ref|NP_877469.1| head-tail connector protein [Pseudomonas phage phiKMV]
gi|195546675|ref|YP_002117756.1| hypothetical protein PT5_gp34 [Pseudomonas phage PT5]
gi|33284812|emb|CAD44221.1| head-tail connector protein [Enterobacteria phage phiKMV]
gi|158187636|gb|ABW23113.1| conserved hypothetical phage protein [Pseudomonas phage PT5]
Length = 510
Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats.
Identities = 56/476 (11%), Positives = 137/476 (28%), Gaps = 38/476 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+ L++ G + E PY + + G+ L++ L+
Sbjct: 9 WEKLRD--GSVEQRAIEFAKTTLPYLMVDPMSGSRGVVEHDFQSAGALLVNNLAAKLARS 66
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + + A + D +V +V ++ S + L
Sbjct: 67 LFPTGIPFFRSELTD-AIRREADSRDTDITEVTAALARVDRKATQRLFQNAS--LAVLTQ 123
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y ++D ++ L + + + + + +
Sbjct: 124 VIKLLIVTGNALLYRDSDAAT--------VVAWSLRSYAVRRDATGRWMDIVLKQRYKSK 175
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ ++ ++ + + + + + + ++K + + +D
Sbjct: 176 DLDEEYKQDLMRAGRNLSGSGSVDLYTHV-----------QRKKGTAMEYAELYHEIDGV 224
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
R +E + PYIV + + E YGR + + +L+ +L + SL
Sbjct: 225 RVGKEGRWPIHLCPYIVPTWNLAPGEHYGRGHVEDYIGDFAKLSLLSEKLGLYELESLEV 284
Query: 303 PTIAVSE-AKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + + E ++ + + L + + F
Sbjct: 285 LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAYERGDYNKMAAIQQSLQAVVVRLNQAF 344
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+ D +A E E +G L + L +D L
Sbjct: 345 MYG--ANQRDAERVTAEEVRITAEEAENTLGGTYSLLAENLQSPLAYVCLSEVDDA-LLQ 401
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ P + S Q + + + G+ + +L + P MD +
Sbjct: 402 GLITKQHKPAIETGLPALSRSAAVQSMLNASQVIAGLAPIAQLDPRISLPKMMDTI 457
>gi|225626357|ref|YP_002727853.1| putative head-tail connector protein [Pseudomonas phage phikF77]
gi|225594866|emb|CAX63151.1| putative head-tail connector protein [Pseudomonas phage phikF77]
Length = 510
Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats.
Identities = 57/476 (11%), Positives = 135/476 (28%), Gaps = 38/476 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+ L++ G + E PY + + G+ L++ L+
Sbjct: 9 WEKLRD--GSVEQRAIEFAKTTLPYLMVDPMSGSRGVVEHDFQSAGALLVNNLAAKLARS 66
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + + A + D +V +V ++ S + L
Sbjct: 67 LFPTGIPFFRSELTD-AIRREADSRDTDITEVTAALARVDRKATQRLFQNAS--LAVLTQ 123
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y +D ++ L + + + + + +
Sbjct: 124 VIKLLIVTGNALLYRNSDEAT--------VVAWSLRSYAVRRDATGRWMDIVLKQRYKSK 175
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ + ++ + + + + + + ++K + + +D
Sbjct: 176 DLDEAYKQDLMRAGRNLSGSGSVDLYTHV-----------QRKKGTAMEYAELYHEIDGV 224
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
R EE + PYIV + + E YGR + + +L+ +L + SL
Sbjct: 225 RVGEEGRWPIHLCPYIVPTWNLAPGEHYGRGHVEDYIGDFAKLSLLSEKLGLYELESLEV 284
Query: 303 PTIAVSE-AKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + + E ++ + + L + + F
Sbjct: 285 LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAYERGDYNKMAAIQQSLQAVVVRLNQAF 344
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+ D +A E E +G L + L +D L
Sbjct: 345 MYG--ANQRDAERVTAEEVRITAEEAENTLGGTYSLLAENLQSPLAYVCLSEVDDA-LLQ 401
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ P + S Q + + + G+ + +L + P MD +
Sbjct: 402 GLITKQHKPAIETGLPALSRSAAVQSMLNASQVIAGLAPIAQLDPRISLPKMMDTI 457
>gi|195546737|ref|YP_002117815.1| head-tail connector protein [Pseudomonas phage PT2]
gi|165880746|gb|ABY71001.1| head-tail connector protein [Pseudomonas phage PT2]
Length = 510
Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats.
Identities = 55/476 (11%), Positives = 135/476 (28%), Gaps = 38/476 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+ L++ G + E PY + + G+ L++ L+
Sbjct: 9 WEKLRD--GSVESRAIEFAKTTLPYLMVDPMSGSRGVVEHDFQSAGALLVNNLAAKLARS 66
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + + A + D +V +V ++ S + L
Sbjct: 67 LFPTGIPFFRSELTD-AIRREADSRDTDITEVTAALARVDRKATQRLFQNAS--LAVLTQ 123
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y ++ L + + + + + +
Sbjct: 124 VIKLLIVTGNALLY--------RDSAAATVVAWSLRSYAVRRDATGRWMDIVLKQRYKSK 175
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ ++ ++ + + + + + + ++K+ + + +D
Sbjct: 176 DLDEEYKQDLMRAGRNLSGSGSVDLYTHV-----------QRKNGTAMEYAELYHEIDGV 224
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
R +E + PYIV + + E YGR + + +L+ +L + SL
Sbjct: 225 RVGKEGRWPIHLCPYIVPTWNLAPGEHYGRGHVEDYIGDFAKLSLLSEKLGLYELESLEV 284
Query: 303 PTIAVSE-AKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + + E ++ + + L + + F
Sbjct: 285 LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAYERGDYNKMAAIQQSLQAVVVRLNQAF 344
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+ D +A E E +G L + L +D L
Sbjct: 345 MYG--ANQRDAERVTAEEVRITAEEAENTLGGTYSLLAENLQSPLAYVCLSEVDDA-LLQ 401
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ P + S Q + + + G+ + +L + P MD +
Sbjct: 402 GLITKQHKPAIETGLPALSRSAAVQSMLNASQVIAGLAPIAQLDPRISLPKMMDTI 457
>gi|167600476|ref|YP_001671975.1| head-tail connector protein [Pseudomonas phage LUZ19]
gi|161168339|emb|CAP45503.1| head-tail connector protein [Pseudomonas phage LUZ19]
Length = 510
Score = 160 bits (405), Expect = 5e-37, Method: Composition-based stats.
Identities = 55/476 (11%), Positives = 134/476 (28%), Gaps = 38/476 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+ L++ G + E PY + + G+ L++ L+
Sbjct: 9 WEKLRD--GSVESRAIEFAKTTLPYLMVDPMSGSRGVVEHDFQSAGALLVNNLAAKLARS 66
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + + A + D +V +V ++ S + L
Sbjct: 67 LFPTGIPFFRSELTD-AIRREADSRDTDITEVTAALARVDRKATQRLFQNAS--LAVLTQ 123
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y ++ L + + + + + +
Sbjct: 124 VIKLLIVTGNALLY--------RDSAAATVVAWSLRSYAVRRDATGRWMDIVLKQRYKSK 175
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ ++ ++ + + + + + + ++K + + +D
Sbjct: 176 DLDEEYKQDLMRAGRNLSGSGSVDLYTHV-----------QRKKGTAMEYAELYHEIDGV 224
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
R +E + PYIV + + E YGR + + +L+ +L + SL
Sbjct: 225 RVGKEGRWPIHLCPYIVPTWNLAPGEHYGRGHVEDYIGDFAKLSLLSEKLGLYELESLEV 284
Query: 303 PTIAVSE-AKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + + E ++ + + L + + F
Sbjct: 285 LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAYERGDYNKMAAIQQSLQAVVVRLNQAF 344
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+ D +A E E +G L + L +D L
Sbjct: 345 MYG--ANQRDAERVTAEEVRITAEEAENTLGGTYSLLAENLQSPLAYVCLSEVDDA-LLQ 401
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ P + S Q + + + G+ + +L + P MD +
Sbjct: 402 GLITKQHKPAIETGLPALSRSAAVQSMLNASQVIAGLAPIAQLDPRISLPKMMDTI 457
>gi|254505047|ref|ZP_05117198.1| hypothetical protein SADFL11_5087 [Labrenzia alexandrii DFL-11]
gi|222441118|gb|EEE47797.1| hypothetical protein SADFL11_5087 [Labrenzia alexandrii DFL-11]
Length = 400
Score = 159 bits (403), Expect = 8e-37, Method: Composition-based stats.
Identities = 57/425 (13%), Positives = 120/425 (28%), Gaps = 51/425 (12%)
Query: 94 KKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIR 153
+ + T+ + +E + + +V G D
Sbjct: 5 PDLEKGFALATNLIT--KEIEKKAWRKPTSLTLELLVSTGNALERYMPDNS--------- 53
Query: 154 YISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTI 213
L + + + + L + +S L ++ + I
Sbjct: 54 IRVYRLDQYVVVRDLSGNLVELILREKVN---------KASLPEQTQSYLKASQEDDVEI 104
Query: 214 IHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQ--IATFPYIVGRYRVRADEIYG 271
+ E + E T P+ R+ E YG
Sbjct: 105 FTC------------AKRHPDGWEIKQEVEGQIIEGMGGVTPTNPFNPLRWSAVPGEDYG 152
Query: 272 RSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREG 331
R E + L+ + ++ T+ A N + G +
Sbjct: 153 RGKVEEHFSDLTYLDLLSKSMVDGSAMATRHITMVRPNAAGSNLRKRFAEAKNGDVISGN 212
Query: 332 RSLF---QPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKG 388
Q +E+ R+ + + FLL ++ + +A E E
Sbjct: 213 PEDVDLKQFANVTGMQIAQQEIARITQELAQAFLL-SSSMIRNAERVTAQEVRMIAEELE 271
Query: 389 AFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQA 448
+ +G + L + + A I + + + G LP PV + +E L + +
Sbjct: 272 SVLGGVYSYLSQDMMSARIEALMTSMMAAGQLPPVLQ-MTQPVLTVGLE---ALERDKDV 327
Query: 449 ESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
V + LQ + + P +D++D + + + P ++ E + RQ
Sbjct: 328 MRVQTVLQTLQAL--------PPDFLDYLDIPDLLKTFMIGLGLPGK-VKTEQEAQQTRQ 378
Query: 509 QREVQ 513
QR +
Sbjct: 379 QRLMA 383
>gi|158345057|ref|YP_001522822.1| putative head-tail connector protein [Pseudomonas phage LKD16]
gi|114796410|emb|CAK25966.1| putative head-tail connector protein [Pseudomonas phage LKD16]
Length = 510
Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats.
Identities = 55/476 (11%), Positives = 134/476 (28%), Gaps = 38/476 (7%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+ L++ G + E PY + + G+ L++ L+
Sbjct: 9 WEKLRD--GSVEQRAIEFAKTTLPYLMVDPMSGSRGVVEHDFQSAGALLVNNLAAKLARS 66
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + + A + D +V +V ++ S + L
Sbjct: 67 LFPTGIPFFRSELTD-AIRREADSRDTDITEVTAALARVDRKATQRLFQNAS--LAVLTQ 123
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y +D ++ L + + + + + +
Sbjct: 124 VIKLLIVTGNALLYRNSDEAT--------VVAWSLRSYAVRRDATGRWMDIVLKQRYKSK 175
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
+ + ++ + + + + + + +++ + + +D
Sbjct: 176 DLDDVYKQDLMRAGRNLSGSGSVDLYTHV-----------QRRKGTAMDYAEMYHEIDGV 224
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
R E + PYIV + + E YGR + + +L+ +L + SL
Sbjct: 225 RVGETGRWPIHLCPYIVPTWNLAPGEHYGRGHVEDYIGDFAKLSLLSEKLGLYELESLEV 284
Query: 303 PTIAVSE-AKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
+ + + E ++ + + L + + F
Sbjct: 285 LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAYERGDYNKMAAIQQSLQAVVVRLNQAF 344
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+ D +A E E +G L + L +D L
Sbjct: 345 MYG--ANQRDAERVTAEEVRITAEEAENTLGGTYSLLAENLQSPLAYVCLSEVDDA-LLQ 401
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ P + S Q + + + G+ + +L + P MD +
Sbjct: 402 GLITKQHKPAIETGLPALSRSAAVQSMLNASQVIAGLAPIAQLDPRISLPKMMDTI 457
>gi|158345175|ref|YP_001522882.1| putative head-tail connector protein [Enterobacteria phage LKA1]
gi|114796471|emb|CAK25009.1| putative head-tail connector protein [Pseudomonas phage LKA1]
Length = 514
Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/517 (9%), Positives = 124/517 (23%), Gaps = 52/517 (10%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLY------PYKNNAQLRM----WDTTGS 51
++ A + + R E+ F P Q + + + G+
Sbjct: 1 MRQQASAMWAEYRDSTAIR-----KAEDFAKFTIASLMVDPLDKTHQAEVVEYDFQSAGA 55
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
L++ L+ + PPG+ + Q ++ +
Sbjct: 56 FLVNNLTAKLALTLFPPGRPSFQIELDD-TLQELAAANGIDQSELHSRTADLERRATRRL 114
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
+ S + L +V G FY E + + + + +
Sbjct: 115 FVNAS--LSKLHRILKLLVVTGNALFYREPGTG--------KMLVWTMQSYTVRRTSHGD 164
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGN 231
V ++ + + ++ + + I P
Sbjct: 165 PAVVVLRQQMPFRELTPEIQADAQAKQIAKRDSDKCDLYTVIEWQPTPNGKR-------- 216
Query: 232 KGFHSKFVSVDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
+ + ++ R E PY+ + V E YGR E RL+
Sbjct: 217 ---CAVWHELEGKRVGPESSYPAHLCPYVPVAWNVPDGEHYGRGYVEEYSGDFARLSILS 273
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLK-PGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
L + +L + D + + + ++ +
Sbjct: 274 ERLGLYEFEALSLLNLVDEAKGGAVDDYRDAETGDFVPGQVGSVASYERGDYNKIAQASA 333
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
+ + + F+ + D + E E +G + L +
Sbjct: 334 SVESIVMRLNRAFMYTGQ--VRDAERVTVEEIRTVAEEAENLLGGVYSLLAETLQAPLAY 391
Query: 409 RELDILDS--QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ G L P + + + + A+ L+ +
Sbjct: 392 LTMYEASRGNGGMLLGIAQGVYRPSIITGIPALT------RNIETANILRATQEASAIVP 445
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
D +++ + + +V
Sbjct: 446 ALV--QLSKRFDPEKLVERIFANNSVDLSTLSKDPDV 480
>gi|312062873|gb|ADQ12735.1| putative Head-tail connector protein [Acinetobacter phage phiAB1]
Length = 518
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 55/505 (10%), Positives = 131/505 (25%), Gaps = 57/505 (11%)
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
+ + G+ +L+S L+S + P + + S + + K + + +
Sbjct: 58 YQSVGAYLVNRLASRLASTLFPVSTSFFRIEPSQE-LKDLVDKRGTST------LIDLEN 110
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
+ S + ++ G + L R L N +
Sbjct: 111 KACRRLFFNAS--YAQIVQALRLLIITG----------EVLLLRRDNRLRVFSLKNYALL 158
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK 225
N+ V + + L ++ ++ L + ++ K +
Sbjct: 159 RNNVGEVLEIITREPKRYRE---------LDAETQALLQDRNEDETLDLYTRIRKRNING 209
Query: 226 KKDKGNKGFHSKFVSVDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+D R + PYI + + YGR E
Sbjct: 210 VISWK------ITQEIDGVRLPNYEIYRDKLCPYIPVTWSYMNGDAYGRGYVEEYAGDFA 263
Query: 284 RLNETVN--ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
+L+E Q L + A + + + + ++ +
Sbjct: 264 KLSELSQGLTEYQIESLIIRHVYNA-QGGFDVESAVNSRNGDWISGNVNAVQNYESGSYQ 322
Query: 342 NPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
L + + + F+ + + +A E E +G + L
Sbjct: 323 KMNEVRLGLEAIMQRLNVAFMYTG--NMREGDRVTAYEIARNADEAEQVLGGVYSQLSQN 380
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ L + + + + L ++ S ++ + L N +
Sbjct: 381 MHLPLAYLLLYE-VRKDFIQAIDRQEIELNILTGLQALS------RSSENQALLVAANEI 433
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ + D + L + + + E+ + + +Q
Sbjct: 434 ATVAQVFS--QVSKRFNLDAIVDKILLSNGIDISEITYSEEEMRAKAMEEQRAAEAQRQQ 491
Query: 521 HLQQQLQQTSQ------DIGAKAAG 539
+QQ Q AAG
Sbjct: 492 VIQQAGAQLGGNQLENTQAAQLAAG 516
>gi|229604951|ref|YP_002875651.1| putative head-tail connector protein [Vibrio phage VP93]
gi|227976996|gb|ACP44098.1| putative head-tail connector protein [Vibrio phage VP93]
Length = 510
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/460 (10%), Positives = 122/460 (26%), Gaps = 43/460 (9%)
Query: 42 QLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCD 101
R + + G+ L+S L+ + P G + ++ + + + + + ++
Sbjct: 47 LQRDFQSHGAMLVNNLASKLTRTLFPTGMSFFRIS-DTDKMREIIAQLGSENAQLSAVFT 105
Query: 102 QVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSN 161
+ GF ++ G Y + R + +
Sbjct: 106 GIEREAMTLLTTHA-GFAQLTH-LMKLLIITGNALLYRDPLTG--------RMTVYSVRD 155
Query: 162 VYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKS 221
+ + V + + ++ + ++ +
Sbjct: 156 YAVRRDGAGRVLCTILRERVPIQDVPEEFRPTGYTDPTTDVW----------LYTKIQRE 205
Query: 222 LTDKKKDKGNKGFHSKFVSVDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPAMEAL 279
D +D PYI + + + E YGR +
Sbjct: 206 TRDAG------DVFVITQQIDGKPVGTLSVYPEKLCPYIPAVWNLVSGEHYGRGHVEDHA 259
Query: 280 PTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLK-PGYMNIGALSREGRSLFQPV 338
R++E L + ++ + ++ L A EG +
Sbjct: 260 GAFARVSELTQALTLYEIEAMRVVNLVSPKSTADVDALNDAETGEYVAGDGEGIKAHEAG 319
Query: 339 QFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGL 398
+ +L + + F+ + D +A E RE +G + L
Sbjct: 320 EARKIAEVVNDLQMVLAELARAFMYTG--NVRDAERVTAEEIKNNVREAEENMGGIYATL 377
Query: 399 QSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVE-YTSPLFKYQQAESVASALQG 457
+E + ++ L + PE L ++ T+ + + + +
Sbjct: 378 -AEILHIPLAHILTVEAR----PELLALLQANAVSLDIQVGTAAINRSIVVQRLGLVAND 432
Query: 458 VNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLI 497
+N ++ + + DRV L I
Sbjct: 433 INLILPVLA-----QATKRTNPDRVIDLILAGHGVDPTEI 467
>gi|115304377|ref|YP_762669.1| PfWMP4_39 [Cyanophage Pf-WMP4]
gi|113201871|gb|ABI33183.1| PfWMP4_39 [Phormidium phage Pf-WMP4]
Length = 641
Score = 148 bits (372), Expect = 3e-33, Method: Composition-based stats.
Identities = 62/539 (11%), Positives = 135/539 (25%), Gaps = 68/539 (12%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPY---KNNAQLRMWDTTGSE------------- 52
+ ++ +++R + +E + N + R + TTG++
Sbjct: 29 VISKWQESRDKRNTVENNWDETYELYRASAIDRQNTRARNFQTTGADDADWRHRINTGHT 88
Query: 53 --ACIKLSSLLSSLITPPGQKWHGLA------ESFSAYQAFLYKEDARSKKVREWCDQVT 104
L + P W L + L K + +R+ +
Sbjct: 89 FEVVETLVAYFKGATFP-SDDWFDLKGMVPELADAARVVKQLTKTKLEAASIRDIFETYV 147
Query: 105 DT-----LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPL 159
+ +R + + + + G DV +R +
Sbjct: 148 RNLVLYGVSTYRLGWDTSMERQFKRTFVETGDIFGGW----EDVAVNRQRSELRIEPLSP 203
Query: 160 SNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYP 219
+V++ + + T +++ + + +
Sbjct: 204 YDVWLDTSG-GKNTGTFVRLRHTREELHELVTSGYYDLDLTQVEQYVDYKFADPDTPKDV 262
Query: 220 KSLTDKKKDKGNKG---------FHSKFVSVDENRFFEEKQIATF---PYIVGRYRVRAD 267
D F + + P++ D
Sbjct: 263 NGTDTSGWDIIEYYGPLLVEGVQFWCVHAVFYGKQLIRLSDSKYWCGSPFVTTTLLPDRD 322
Query: 268 EIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDL--KPGYMNIG 325
+YG S L + LN N L ++ V + + D+ KPG +
Sbjct: 323 SVYGMSVLHPNLGALHVLNVLTNGRLDNLVLHINKMWTLVEDGILKREDVKAKPGAVFKV 382
Query: 326 ALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQV------LDDKASRSAAE 379
A QP+ G + + S++ +AAE
Sbjct: 383 AQHGS----LQPIDMG-RQDFVVTYQEAQVQESSVYRNTSTGPLIGNAAPRGGERVTAAE 437
Query: 380 SMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYT 439
G + + ++ ++++ +L PE P +
Sbjct: 438 IQGVRDAGGNRLSSVHTHIEDSSTLPLLNKVFSLLQQFYVTPETIRMYVPEEQMDGFFEV 497
Query: 440 SP--LF-----KYQQAESVASALQGVNTVVELGVKTG-DPSCMDHMDTDRVSRFSLWAT 490
SP L A V + V +++L +G P +D + L
Sbjct: 498 SPEYLHYPYKFLALGANYVVERERMVTDLLQLLDISGRVPQIGQSLDYALILEDLLRQM 556
>gi|148747833|ref|YP_001285799.1| portal protein [Phormidium phage Pf-WMP3]
gi|146230066|gb|ABQ12474.1| portal protein [Phormidium phage Pf-WMP3]
Length = 651
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 76/635 (11%), Positives = 171/635 (26%), Gaps = 120/635 (18%)
Query: 9 IQDRFNYLKNQRG----ELNYWM------EELTGFLYPY--------KNNAQLRMWDTTG 50
++ + + R E +L + + ++
Sbjct: 25 VKKEYKRFCDARQVCEETWLEAWGMYLSTPEAQDYLRDQVLRSVGDVNADWRHKITTGKA 84
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
EA + + L S P + W + + L + +
Sbjct: 85 FEAIETIHAYLMSATFP-NKNWFDVVPAKPGQDNLLVSRL------------IKRYVQDK 131
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYME-----ADVDEKGLEEGIRYISVPLSNVYMS 165
+ F +F ++ G + A+V +K + P V
Sbjct: 132 LTEGK--FRAAYANFLRQLLITGNSVLALPWRVETAEVKKKVQVRTPLFEDEPTFEVVSE 189
Query: 166 V-----NHQNVVDSVYREFTFTVDQIVSK-----------------------WGDKVLSS 197
+ V ++ F ++ +G L
Sbjct: 190 EREVKSSPDFEVLDMFDCFYDPNVTDPNRGAFIRKLTKTKADILNLLSEGYYYGVDPLDV 249
Query: 198 KMKSALARNENERFTI------------IHAVYPKSLTDKKKDKGNKGFHSKFVSVDENR 245
++ ++ + H NK +H V++ N
Sbjct: 250 VEHKCKDTSDTKQDMLSTFQGVTTSLWSPHQNVELLEYWGDIHLENKTYHDVVVTIMGNE 309
Query: 246 FFEEKQIATF---PYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
+Q + P+++G Y A + Y L + LN N+ L++
Sbjct: 310 VLRFEQNPYWCGRPFVIGTYIPTARQPYAMGALQPNLGMLHELNIITNQRLDNLELAIDQ 369
Query: 303 PTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFL 362
S+ + D+ + +S G Q N ++E + L+ +I F
Sbjct: 370 MYTLRSDGLLQPEDVYTEPGKVFLVSDHGDLQPLANQSSNFSITYQESSFLESTIDKNFG 429
Query: 363 LDLF---QVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDS--- 416
+ +AAE G + + ++ + ++ + + ++
Sbjct: 430 TGNYVGANAARSGERVTAAEVAAVREAGGNRLSGIHKHIEETSLLVLLEKVMHLVQQFTD 489
Query: 417 -----------QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
G E +++ ++ + + L + V ++
Sbjct: 490 QPGMVRVAGDEAGAYEYYELDVEDLQKEVRLVPIGSDHVIERKQYIEDRLTFIQAVAQV- 548
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
P +D R+ L E E +Q++ Q ++ L Q
Sbjct: 549 -----PEMGQLVDYKRILVDLLQHWGF--------EEPEAYLKQQDQQAPANPQEALLSQ 595
Query: 526 LQQTSQDIGAKAAGRAMEKKLTHD----MMENSYG 556
++D+G +A ++ +L D MM YG
Sbjct: 596 ----AKDVGGQAMSNMLQNQLQADGGTQMMSEMYG 626
>gi|281306687|ref|YP_003345493.1| predicted phage head-tail connector protein [Pseudomonas phage
phi-2]
gi|271277992|emb|CBH51598.1| predicted phage head-tail connector protein [Pseudomonas phage
phi-2]
Length = 518
Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats.
Identities = 54/470 (11%), Positives = 133/470 (28%), Gaps = 37/470 (7%)
Query: 38 KNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVR 97
N + + G+ L++ L + + P G + S + A + + ++V
Sbjct: 43 SNQTVQHDFQSVGALLTNNLTAKLVASLFPSGVPFFKNMPSKTLLAAAVEQSINE-QEVN 101
Query: 98 EWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISV 157
++ + L ++ G Y + +
Sbjct: 102 NMLARLDREATERLFVQATT--AKLTRLLKLLIITGNALAYRDPKTG--------KMTVW 151
Query: 158 PLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAV 217
+ + + V + D++ + K + FT+I
Sbjct: 152 SIRSYVVRRAADGEFRHVVLKQIMRFDELPEHVQADYTAKKPGQYKPDRMMDYFTVIE-- 209
Query: 218 YPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPA 275
K+ NK + +D R E P+IV + + E YGR
Sbjct: 210 -------KQPGAVNKRV-VVWNEIDGLRVGPESSYPEHLAPWIVTVWNLADGEHYGRGLV 261
Query: 276 MEALPTIRRLNETVNE--LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRS 333
+ +++ + L + LSL + + + + +
Sbjct: 262 EDFTGDFAKVSLVSEQLGLYELEALSLLNVVDESAGGVIDEYQ-ESDTGDYVRGKTAAIT 320
Query: 334 LFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGP 393
++ + E + + + + F+ +A E +E + +G
Sbjct: 321 SYERGDYNKINAVRESIGEVIQRLSMAFMYTG--NTRQAERVTAEEIRAVAKEAESTLGG 378
Query: 394 LIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
+ L G + + + + P + + L + + +++ +
Sbjct: 379 VYSLLAETLQGPLAYLCMADVADDLMMGLVTKQYKP----VILTGIPALSRAVEMQNLLA 434
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
A Q + +V + D +D +V+ + + I EV
Sbjct: 435 ATQEIAAIVP-ALTQLDT----RVDGSKVADLIYNSRSVDVSRIFKEPEV 479
>gi|308071876|emb|CBW54797.1| putative head-tail connector protein [Pantoea phage LIMElight]
Length = 529
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/487 (10%), Positives = 126/487 (25%), Gaps = 44/487 (9%)
Query: 42 QLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCD 101
R + + G+ L+S ++ + P + + ++ + A +K+
Sbjct: 50 LQRDYQSKGAMLVNNLASKVTQALFPQNNAFFEIGQTAEML-QVAQEMGADAKQAASKFA 108
Query: 102 QVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSN 161
+ + L ++ G Y + + + + + +
Sbjct: 109 GIEVRASARVFLNAG--YSALSHAMKLLIITGNALVYRDPTNKQ--------FHTYSVRD 158
Query: 162 VYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKS 221
+ + V + + + + + L + E T+ V
Sbjct: 159 YVVKRDGSGKVLCLILKERIALQDLPEDFRLSRL------QYRTDPFEDVTLYTKV---- 208
Query: 222 LTDKKKDKGNKGFHSKFVSVDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPAMEAL 279
+K G + + V++ PYI + + E YGR +
Sbjct: 209 ---TRKHNGARVMYEVTQEVEDYPIGTPSTYPEYLCPYIPLTWNLVTGENYGRGHVEDFA 265
Query: 280 PTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALS-----REGRSL 334
RL+E + + I A D G
Sbjct: 266 GDFARLSELSESSLLYEVEMMRLINIIDPGAGIDLDDFMDADCGKAVAGKSNAAGNGVVA 325
Query: 335 FQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPL 394
+ ++ L + + F+ D +A E E +G +
Sbjct: 326 HEGGNAQKLAAVQNDIANLVQQLSIAFMYTG--NTRDAERVTAEEIRANVSEANQTLGGV 383
Query: 395 IGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVE-YTSPLFKYQQAESVAS 453
L SE + ++ L + + P L V + L + E +
Sbjct: 384 YANL-SEVLHLQLAHILSVEEE----PALLQLLMVQGIKLDVSVGLASLNRQANVERLQY 438
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQ 513
+ V+ + ++ + D + + T + Q+++
Sbjct: 439 LANALQIVLPVLTQSS-----KRFNPDLIIDAMCQGYGVDREALSYTEDQLQQLQEQQDA 493
Query: 514 RRVMEEQ 520
Q
Sbjct: 494 SAQQSAQ 500
>gi|332800729|emb|CBY88569.1| hypothetical protein [Pantoea phage LIMEzero]
Length = 522
Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/528 (10%), Positives = 152/528 (28%), Gaps = 51/528 (9%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLY--------PYKNNAQLRM-----WDTTGSEA 53
+ + R+ + + + + N R + + G+
Sbjct: 13 ESLWQRYRD-----TNVVTKARDYSRYTLSKLVSEYDALDANDTSRAQITRDYQSVGALL 67
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L + L+ + P Q++ + Q + + +V + + T+ +
Sbjct: 68 VNNLVARLAEFLFPSNQRFVRVKP-----QNLTDAQREKMGQVNQGLILIEKTVSERAKA 122
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+ L G Y ++D + Y L N + + + VV
Sbjct: 123 NGG--YADLIQAIAHQAVTGNVALYRDSDSET--------YRVYGLENFVVQRDGRGVVV 172
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+ D + +++ ++ + + + + + G
Sbjct: 173 DAIIKERLQYDSLPAEFQAQLKAQNFQCGGNKRI--WLYTRVLRVKRGNNYGYEITQQIG 230
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
S V + ++ EK P+I + +++ E YGR + RL+ A
Sbjct: 231 NMSGSVYTPGDDYYPEK---VCPWIFPVWSLKSGEHYGRGIVEDHAGDFARLSMLSESSA 287
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGR-SLFQPVQFGNPLPYHEELNR 352
+ + ++ + + + +L + + + +E+ +
Sbjct: 288 LYMQEAMRILWLLSGSGGNADDIEAAETGQVISLQTGTKLEGVEVGDYQKVQQARDEIGQ 347
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
+ + + F+ D +A E + +G +Q++ + ++ L
Sbjct: 348 IVQRLSQAFMYTGE--FRDSERTTATEIQQVATSAERAMGGPYS-MQAKTLQIPLAYVLL 404
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN--TVVELGVKTGD 470
+P+ +L+++ + L ++ + +Q ++ V +
Sbjct: 405 SEIDDTLVPDI------VGKILELQVVAGLDALGRSIEASQLIQALSDAQAAIAAVANIN 458
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIR-DTAEVEDIRQQREVQRRVM 517
+D V + R E++ QQ
Sbjct: 459 QVAQGVLDPKAVLETIFSSNGVALDDYRTSPEELQAKAQQINQMTAEA 506
>gi|239907145|ref|YP_002953886.1| hypothetical protein DMR_25090 [Desulfovibrio magneticus RS-1]
gi|239797011|dbj|BAH76000.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 682
Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats.
Identities = 60/619 (9%), Positives = 146/619 (23%), Gaps = 118/619 (19%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSE--------ACIK 56
A + F + R E + A + S+
Sbjct: 9 LASKLAKEFRDAQRARQPWEMKWLERYRMYMGEYDEAVANSFSANASKLFVNKCRVKVDT 68
Query: 57 LSSLLSSLITPPG--QKWHGLAESFSAYQAFLYKE-------DARSKKVREWCDQV---- 103
+ S L ++ P + W + + + + ++ +
Sbjct: 69 IVSRLMEILFPQAGDRNW-SIEPTPEPVLEPAMMDFIAGVRRAYGDAEAVKFLQDIAKQR 127
Query: 104 TDTLFGFRE------RSRSGFVGCLQSFYTSVVEFG-----------------TGCFYME 140
++ + G+ ++ +G T E
Sbjct: 128 SEAMSRVIADQLAESPDHVGYRATIREVILDGAIYGMGIHKGPLVDERKRRVWTAKLVAE 187
Query: 141 ADVDEKGLEEGIR------------YISVPLSNVYMSVNHQNVVDSV---YREFTFTVDQ 185
VD + ++ Y V + Y + + Y E+
Sbjct: 188 PGVDGRAIQREAWVLDTSPVERRPYYRRVSPWSFYWDQSANRRMGDCRYGYEEYRMVYGD 247
Query: 186 IVSK-----WGDKVLSSKMKSALARNENERFTIIHAVYPKSLT----------------- 223
++ + V+ + + + E T
Sbjct: 248 VLELAGRTGFDGDVVRAYLAEKRDGDATEYDFESQLRSINGGTPEPQLQGRWRVLERYGW 307
Query: 224 -----------DKKKDKGNKGFHSKFVSVDENRFFEEK---QIATFPYIVGRYRVRADEI 269
D D + + + + FP+ + +
Sbjct: 308 LRGDELEECGVDLGNDPVQADYFCNVWMLGGKIIKAVRAPIRGVEFPFQIFPMFRDDSSL 367
Query: 270 YGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR 329
G +N V + R+SL P A Q+ D
Sbjct: 368 CGLGVTGVYRDAQSAINAVVRAMMDNARMSLGPIGGVNVPALQQTLDADNIRGGTWLKFD 427
Query: 330 EGRSLFQPVQ-------FGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESME 382
G + + + + L + + + + + + + D A +
Sbjct: 428 TGEDMSKAITFWQASSHTSDYLALAKYFDDMGDELTVPRWVHGDGNVSDAAR-TLGGLSM 486
Query: 383 KTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPL 442
+ ++ E ++ P+ +G +
Sbjct: 487 LMNAMSINLAEMVKIFDDEVTSQFVTALYHWNMDFNPRPDIKGDFSVVARG--------- 537
Query: 443 FKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
++ V S + + + +P +D ++ R + PA ++ D A
Sbjct: 538 ATALMSKEVQS-QRLIQFMTMCAS---NPQFAPMLDVNKGLRQVATSMQIPADIVYDQAT 593
Query: 503 VEDIRQQREVQRRVMEEQH 521
V ++ Q+R++ +V EQ
Sbjct: 594 V-ELNQERQMAMQVRIEQA 611
>gi|325171218|ref|YP_004251190.1| hypothetical protein ViPhICP2p19 [Vibrio phage ICP2]
gi|323512244|gb|ADX87701.1| conserved hypothetical protein [Vibrio phage ICP2]
gi|323512316|gb|ADX87772.1| hypothetical protein TU12-16_00090 [Vibrio phage ICP2_2006_A]
Length = 581
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 68/583 (11%), Positives = 160/583 (27%), Gaps = 82/583 (14%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR---MWD--TTGSEACI-- 55
A+ I + + +QR E EL +++ W TT + C
Sbjct: 17 DGLAEQIANTWQNWNSQRQEWLSQKSELRNYIFATDTTTTTNSTLPWKNKTTLPKLCQIR 76
Query: 56 -KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
L S S + P ++W ++ +++A+ ++++ D +
Sbjct: 77 DNLHSNYISALFP-NERWLK-------WEGKSLQDEAKRDAIQQYMDN---------KVK 119
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV-D 173
S F + +++G +E + EE + ++ +++V +
Sbjct: 120 ESDFRTIMSQLLLDYIDYGNCFATVEYVKETTKDEESGATRDTYFGPRAVRIDPKDIVFN 179
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALAR---------------------------- 205
V +F + I + + L +
Sbjct: 180 PVAVDFAHSPKIIRTVLNEGELLQMEQDQPENASLASAIARRREFRRGLGTYTREDCEKA 239
Query: 206 ---------NENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENR--FFEEKQIAT 254
N + F + D D + F +R EEK+ +
Sbjct: 240 VGFSMDGFGNLYDYFQSPYVEVLTFYGD-YHDTQSGTFKRNMKVTIIDRMFVIEEKENPS 298
Query: 255 F----PYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEA 310
+ P +R+R D +Y P + R++ N A L PP +
Sbjct: 299 WFAQAPIFHCGWRIRQDNLYAMGPLDNLVGMQYRIDHLENLKADVFDLIAFPPMKVKGD- 357
Query: 311 KQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLD 370
F P + P ++ K +
Sbjct: 358 -VEEFVWGPMEQIYI-NGDGDVEMMAPNTQALQADMQIQILEAKM-EEFAGAPREAMGIR 414
Query: 371 DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPP 430
++A E + G I + + +++ L+I ++ + +
Sbjct: 415 TPGEKTAFEVQQLQNAAGRIFQEKIMNFEVMLMEKVLNAMLEISRRNLDVADTIRVFDSD 474
Query: 431 VSLLKVEYTS-------PLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVS 483
+ + + A A Q V +++ + H+ T+ ++
Sbjct: 475 DKVATFMNVNKDDITAKGRLRPVGARHFAEQAQVVQSLMGIANTPVWQDIKPHVSTENLA 534
Query: 484 RFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
+ + + + V + + + + + + Q
Sbjct: 535 KMLEHNLSLGGWDIFKPNVAVMEAQTTSALVNQSQAQIEEEAQ 577
>gi|291334262|gb|ADD93925.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C235]
Length = 155
Score = 91.4 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Query: 251 QIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEA 310
+ PY+V R+ A E+YGR P + ++P I+ N + + + ++++ +
Sbjct: 41 GEGSNPYVVFRWSKAAGEVYGRGPLLNSMPAIKTCNLVIEMILENAQMAISGMYQMEDDG 100
Query: 311 KQR--NFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRS 359
L PG + + S G + GN L ++++I
Sbjct: 101 IINVDTIQLLPGTIIPRSPSSRGLEPIK--NAGNFNVADLVLKDMRQNINE 149
>gi|9964612|ref|NP_064741.1| gp5 [Roseobacter phage SIO1]
gi|9944303|gb|AAG02587.1|AF189021_5 gp5 [Roseobacter phage SIO1]
Length = 271
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 60/238 (25%), Gaps = 26/238 (10%)
Query: 272 RSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREG 331
P + R++ N A +P + +FD +P
Sbjct: 1 MGPLDNLVGMQYRIDHLENLKADVFDQIAYPVLKIRGD--VEDFDFEPNARIYLG-DEGD 57
Query: 332 RSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQV-LDDKASRSAAESMEKTREKGAF 390
P + + ++ + + + + ++A E + G
Sbjct: 58 VGYLVPDSTALNADFQ--IQNIEAKMEMMAGAPREAMGIRSAGEKTAFEVGQLMTAAGRI 115
Query: 391 VGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLL--------------KV 436
+ F+ +++ L+ + + N L K+
Sbjct: 116 FQHKTAHFERVFLEPILNAMLETARRNMDYEDTAKVLNEDTGLYFFTQITRDDIKANGKI 175
Query: 437 EYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPA 494
++A+ V + K DP+ H+ +R PA
Sbjct: 176 VPMGARHFAERAQRVQNLTTMYQI------KASDPTVAAHLSGKEFARLLADELGEPA 227
>gi|291334465|gb|ADD94119.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161]
gi|291334522|gb|ADD94175.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291334658|gb|ADD94305.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
gi|291334712|gb|ADD94358.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
gi|291336438|gb|ADD95993.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 86
Score = 82.2 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
MI R ++ + +++EY SPL K Q++ ++S ++ + + L
Sbjct: 1 MIDRTFALILRKNLFRPAPEFLAGQD--IEIEYVSPLAKAQKSTELSSIMRAIEILGSLS 58
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAV 495
DH++ D++ R P
Sbjct: 59 NVA---PVFDHINMDKLVRHLADIVGVPQK 85
>gi|291334263|gb|ADD93926.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C235]
Length = 130
Score = 81.4 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 371 DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPP 430
++ SA E E+ + +G G LQ+E + ++ R + IL QG +
Sbjct: 6 NRTPMSATEVAERMADLSRQIGSSFGRLQAEMVTPVLQRVIHILKKQGRINIP----TVN 61
Query: 431 VSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWAT 490
+K++ TSPL + Q + + + + V G + G +D++ +++
Sbjct: 62 GREIKIQSTSPLAQAQANQDINGFNRFLELV---GARFGPQLINLLVDSNEATKYLAENL 118
>gi|9964610|ref|NP_064740.1| gp3 [Roseobacter phage SIO1]
gi|9944301|gb|AAG02585.1|AF189021_3 gp3 [Roseobacter phage SIO1]
Length = 282
Score = 74.5 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 69/260 (26%), Gaps = 35/260 (13%)
Query: 1 MNQR--SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR---MW-DTTGSEAC 54
M A +I +R+ N R E +EL ++Y W ++T +
Sbjct: 11 MIDPHSLAVEIANRWTSWNNARSEKVKEWKELRNYIYATDTRTTSNNKLPWSNSTTTPKL 70
Query: 55 IKLSSLLS----SLITPPGQKWHGLAESF---------SAYQAFLYKEDARSKKVREWCD 101
+++ L + + P ++W + S QA++ + +S V
Sbjct: 71 TQIADNLHANYFAALFP-QKRWFRFEATDADSDTKIKRSIIQAYMQNKLRQSDFVNTTSK 129
Query: 102 QVTDTLFGFRERSRSGFVGCLQSFYTS-----------VVEFGTGCFYMEADVDEKGLEE 150
V D + + F + Y VV
Sbjct: 130 LVNDYIQYGNCFATVDFERKVTK-YEDGDRIVNYVGPKVVRISPFDICFNPLAANFSDTP 188
Query: 151 GIRYISVPLSNV---YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNE 207
I + L + + + + + ++ + D S + +
Sbjct: 189 KIVRSVLTLGEIQRMVENDSSKGYMADIFNKMLGNRGSARGNEVDINKSEGFVADGFASL 248
Query: 208 NERFTIIHAVYPKSLTDKKK 227
+ + + D
Sbjct: 249 TDYYESDYVEVLTFYGDIYD 268
>gi|291334524|gb|ADD94177.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291334656|gb|ADD94303.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
gi|291334710|gb|ADD94356.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
gi|291336436|gb|ADD95991.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 95
Score = 74.1 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Query: 34 LYPYKNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARS 93
+ ++D + ++ L++ L ++T P W L F +
Sbjct: 11 TRSKGDKRTELIFDGSPLQSVELLAASLHGMLTNPSTPWFSLR--------FKQNDMENE 62
Query: 94 KKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYT 127
+ +EW + T+ ++ ++S F +
Sbjct: 63 DEAKEWLEDATEVMYS--AFNKSNFQQEYLNCIM 94
>gi|296532334|ref|ZP_06895072.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267358|gb|EFH13245.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 72
Score = 69.1 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-NNAQLRMWDTTGSEACIKLSSL 60
+ + + I R+ +R +E + + ++D T +A +L++
Sbjct: 1 MRPTPETILPRYQAALARRRPWEGVWQECYDHVLAQTPGSGGAMLYDATAPDAAEQLAAS 60
Query: 61 LSSLITPPGQKW 72
L + +TPP +W
Sbjct: 61 LLAELTPPWSRW 72
>gi|170719076|ref|YP_001784230.1| hypothetical protein HSM_0898 [Haemophilus somnus 2336]
gi|168827205|gb|ACA32576.1| Haemophilus-specific protein, uncharacterized [Haemophilus somnus
2336]
Length = 725
Score = 60.2 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/402 (9%), Positives = 102/402 (25%), Gaps = 23/402 (5%)
Query: 165 SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD 224
S + +D++ ++ + ++ N+ +A+
Sbjct: 257 SSDMDGYLDTLRTLSGLEKASNDKRYEVWTYHGGIPVSVLEQANQSLEEGYALELTEEQK 316
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+K + + + A FPY V ++G
Sbjct: 317 SEKAEIDGVIVMTGNGKILSVNLNPLDTAEFPYSVYTCEPDVACVFGFGIPYLCRDAQEI 376
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFD----LKPGYMNIGALSREGRSLFQPVQF 340
LN + G L++ I V+ + D +KP + + F+ +
Sbjct: 377 LNTAWRGMIDNGVLTI-GSQIVVNSSVLSPVDKSWEIKPNKLWRTNDRASANASFEAQRA 435
Query: 341 GNPLPYHEELNRLKESIR--SLFLLDL--FQVLDDKASRSAAESMEKTREKGAFVGPLIG 396
+ L I+ F+ + ++ ++ +
Sbjct: 436 FGVFNFESRQQELANIIQLAKSFMDEESGLPMIAQGEQGQVTPTLGGMSMLMNAANAVRR 495
Query: 397 GLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQ 456
E+ + + + + + + TS L + Q
Sbjct: 496 RQVKEWDDQVTKPLIRRFYEYNMAMD-DDPNIKGDMQVVARGTSAL--------LVKETQ 546
Query: 457 GVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRR 515
+ P D ++ + + + A ++ + E QQ E
Sbjct: 547 TAQIIDIFQKFGNHPQLSYAFDWYDGAKTLMQSMSMGAKTMLLSREDYEQKLQQIEQANA 606
Query: 516 VMEE----QHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMEN 553
+ Q Q+Q + + M+ + + +
Sbjct: 607 TQPQDPEILKSQMQMQLAQKKQQHEMQLEQMKLQHAMQIEQM 648
>gi|291335814|gb|ADD95414.1| hypothetical protein [uncultured phage MedDCM-OCT-S05-C849]
Length = 55
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 16/63 (25%), Gaps = 10/63 (15%)
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S + ++ G +M D + PL+ + +
Sbjct: 1 MEYIAASNDRVAIHQALKHLIVGGNALIFMHKDG----------LKTFPLTRYVVERDGD 50
Query: 170 NVV 172
V
Sbjct: 51 GNV 53
>gi|113461527|ref|YP_719596.1| hypothetical protein HS_1384 [Haemophilus somnus 129PT]
gi|112823570|gb|ABI25659.1| hemophilus-specific protein, uncharacterized [Haemophilus somnus
129PT]
Length = 688
Score = 56.4 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/418 (11%), Positives = 104/418 (24%), Gaps = 41/418 (9%)
Query: 165 SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD 224
S + +D++ ++ + ++ N+ +A+
Sbjct: 220 SSDMDGYLDTLRTLSGLEKASNDKRYEVWTYHGGIPVSVLEQANQSLEEGYALELTEEQK 279
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+K + + + A FPY V ++G
Sbjct: 280 SEKAEIDGVIVMTGNGKILSVNLNPLDTAEFPYSVYTCEPDVACVFGFGIPYLCRDAQEI 339
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFD----LKPGYMNIGALSREGRSLFQPVQF 340
LN + G L++ I V+ + D +KP + + F+ +
Sbjct: 340 LNTAWRGMIDNGVLTI-GSQIVVNSSVLSPVDKSWEIKPNKLWRTNDRASANASFEAQRA 398
Query: 341 GNPLPYHEELNRLKESIR--SLFLLDL--FQVLDDKASRSAAESMEKTREKGAFVGPLIG 396
+ L I+ F+ + ++ ++ +
Sbjct: 399 FGVFNFESRQQELANIIQLAKSFMDEESGLPMIAQGEQGQVTPTLGGMSMLMNAANAVRR 458
Query: 397 GLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQ 456
E+ + + + + + TS L + Q
Sbjct: 459 RQVKEWDDQVTKPLIRRFYEYNMAMN-DDPNIKGDMQVVARGTSAL--------LVKETQ 509
Query: 457 GVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRR 515
+ P D ++ + + + A ++ + E QQ E
Sbjct: 510 TAQIIDIFQKFGNHPQLSYAFDWYDGAKTLMQSMSMGAKTMLLSREDYEQKLQQIEQANA 569
Query: 516 VMEE---------------------QHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
+ L+Q Q + I + EK+L MME
Sbjct: 570 TQPQDPEILKSQMQMQLAQQKQQHEMQLEQMKLQHAMQI-EQMKVAIKEKELEVKMME 626
>gi|291334412|gb|ADD94067.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1035]
Length = 64
Score = 56.4 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 1 MNQ-RSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQL 43
M Q AK + RF+ LK+QR +E+ ++ P K +
Sbjct: 1 MAQSEKAKILLSRFDRLKSQRQNWESHWQEVADYMQPRKADVTK 44
>gi|294083946|ref|YP_003550703.1| putative portal protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663518|gb|ADE38619.1| putative portal protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 697
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/319 (10%), Positives = 86/319 (26%), Gaps = 18/319 (5%)
Query: 237 KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
V+ N + +++ P++ YG + A + T +
Sbjct: 323 HKVTKAGNVLLDIEEVKRRPFVTFCPLPIPHAFYGSNFAEKLCATQNARTVLTRSILDHA 382
Query: 297 RLSLHPPTIAVSEAKQRNFDLKP----GYMNIGALSREGRSLFQPVQFGNPLPYHEELNR 352
++ +P + V +L G +N+ P+ +
Sbjct: 383 MITNNPRYMVVKGGLSNPRELIDNRVGGLVNVSRPDAISAMPQAPLNPFVFQTLQQLDQD 442
Query: 353 LKES--IRSLFLLDLFQVLDDKASRSAAESMEKTREKGA-FVGPLIGGLQSEFIGAMISR 409
L+++ + L + + S + E + ++ + +
Sbjct: 443 LEDNTGVSRLSQGLNKDAISKQNSAAMVEQLATMSQQRQKILARHFAQFVKSLFHEIYRL 502
Query: 410 ELDILDSQGNL----------PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
++ D Q + P + LK+ Y + Q+ ++ +
Sbjct: 503 VVENEDQQKIVEISGAYVEVDPRSWSDKRDVMVELKLGYGEQDAEAQKMLALHTLFSQDP 562
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
+ + + + + + P +L + Q + + ME
Sbjct: 563 NIQPMYGMENRFAMLKKILEQQGILNVEEFLTPPQMLQPPQPDPAAEMQAQM-AMKQMEL 621
Query: 520 QHLQQQLQQTSQDIGAKAA 538
Q Q + +T A
Sbjct: 622 QERQTAVAETKATTDQAVA 640
>gi|167583563|ref|YP_001671753.1| portal protein [Enterobacteria phage phiEco32]
gi|164375401|gb|ABY52809.1| portal protein [Enterobacteria phage phiEco32]
Length = 747
Score = 54.1 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/419 (10%), Positives = 102/419 (24%), Gaps = 26/419 (6%)
Query: 137 FYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLS 196
+++ + + +++ + ++T T+D S
Sbjct: 208 IFVDEHATSFADAQYFCHRVRRSKEDLVAMGFPKDEIEAFNDWTDTMDTTQSTVAWSRTD 267
Query: 197 SKMKSALARNEN-ERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATF 255
+ + E + VY + D NK V +++
Sbjct: 268 WRQDIDADIGTDTEDIASMVWVYEHYIRTGVLD-KNKESKLYQVIQAGEHILHTEEVTHI 326
Query: 256 PYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF 315
P++ YG+S V + + A+ A R
Sbjct: 327 PFVTFCPYPIPGSFYGQSVYDITKDIQDLRTALVRGYIDNVNNANYGRYKALVGAYDRRS 386
Query: 316 DLKPGYMNIGALSREGRSLFQP---VQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDK 372
L + + R+ P + G + L K
Sbjct: 387 LLDNRPGGVVEMERQDAIDLFPYHNLPQGIDGLLGMSEELKETRTGVTKLGMGINPDVFK 446
Query: 373 ASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP----------- 421
+ A + + + + ++ ++ G +P
Sbjct: 447 NDNAYATVGLMMNAAQNRLRMVCRNIAHNGMVELMRGIYSLIRENGEVPIEVQTPRGMVQ 506
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+L V SP K ++A+ + S Q + +L G DR
Sbjct: 507 VNPKQLPARHNLQVVVAISPNEKAERAQKLISLKQLIAADAQLAPLFGLEQ-------DR 559
Query: 482 VSR-FSLWATNTPA--VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKA 537
+ + + ++ + + +Q +SQ + A A
Sbjct: 560 YMTAQIFELMGIKDTHKYLLPLEQYQPPEPSPMEILQLEMTKAQVENVQASSQKMIADA 618
>gi|291334599|gb|ADD94249.1| hypothetical protein Daci_1943 [uncultured phage
MedDCM-OCT-S04-C136]
Length = 741
Score = 53.7 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/455 (10%), Positives = 121/455 (26%), Gaps = 46/455 (10%)
Query: 76 AESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTG 135
+ Y+ E + ++ + V + +F E ++ F L+ + V+
Sbjct: 141 KVDYETYENLSIVEKEALQDTKDEIETVEEEVFE-DESAKEKFEEVLKQYEMQGVDISQV 199
Query: 136 CF----YMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS--VYREFTFTVDQIVSK 189
+ ++ S+P + + + + D+ V + T +V+
Sbjct: 200 QVPNFNLYNCKIKRIKKTGRVKIESIPPEEFLIDRSAKTIEDADFVSHKVLMTRSDLVAM 259
Query: 190 -WGDKVLSSKMKSALARNENERFTIIHAVYP-----KSLTDKKKDKGNKGFHSKFVSVDE 243
+ + KS L +E + V + T +K + + D
Sbjct: 260 GYPQDEVDELPKSDLDIYNDEETVRLADVDDYRISSSTDTSTEKVLVYESYVKYDYDEDG 319
Query: 244 --------------NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
+ + P++ YGRS + + +
Sbjct: 320 IAELRKIVSAGADGHHILSNMPCDSVPFVTITPIPMPHRFYGRSISELVEDVQLMKSTVM 379
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-------N 342
+L L+ + + + L I + + QP+Q
Sbjct: 380 RQLLDNMYLTNNNRVAVMDGMVNMDDLLTTRPGGIVRTKQPPNQVMQPLQAQPISQQAFP 439
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS-- 400
L Y + + + + L+ K + M++T+ + + +
Sbjct: 440 LLSYLDSVREGRTGVSKEAQGLSPDTLNAKTATGVNALMQQTQMRSELIARVFAETGVKD 499
Query: 401 ------EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASA 454
E + +E I+ S +P + L + +
Sbjct: 500 LFKKIFELMVKYQDKEKIIMMSNQYIPVRPTEWKDR---FNISIVVGLGTGSKEQQTIML 556
Query: 455 LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWA 489
+ ++ G M ++ +
Sbjct: 557 NSILERQLQAFQIQGGKE-MPMVNLKNMYNTLTKM 590
>gi|313113989|ref|ZP_07799544.1| hypothetical protein HMPREF9436_01396 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623691|gb|EFQ07091.1| hypothetical protein HMPREF9436_01396 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 649
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/396 (10%), Positives = 114/396 (28%), Gaps = 27/396 (6%)
Query: 79 FSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFY 138
+ + + +K + ++ T+ + + + ++ GTG
Sbjct: 106 DNYPEPNVLPRAEDDEKTAKALSKILPTV-----LEQCDYETVYSDTWWRKLKTGTGVKG 160
Query: 139 MEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS--VYREFTFTVDQIVSKWGDKVLS 196
+ D + +G I SV L +Y +++ D+ ++ DQ+ ++
Sbjct: 161 VFWDPEARGGLGEICIRSVNLLMLYWEPGVEDIQDTPHLFSLSLMDNDQLEGRYPQMAGH 220
Query: 197 SKMKSALARNENERFTIIHAVYPKSLTDKKK---------DKGNKGFHSKFVSVDENRFF 247
+ +A+ ++ KK + + + +
Sbjct: 221 TGSSMDVAKYIHDDSIDTGDKSVVVDWYYKKALEGGQTVLHYCKYCNGVVLYASENDPQY 280
Query: 248 EEKQIAT---FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPT 304
++ +P++ D G T ++E + + + +L+
Sbjct: 281 AQRGFYDHGKYPFVFDPLFREEDSPAGFGYIDVMKDTQTAIDEMNHAMDENVKLAAKARY 340
Query: 305 IAVSEAKQRNFDLK-PGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLK-ESIRSLFL 362
+ A +L G + + R F+P+Q + ++ +
Sbjct: 341 VLSDTAGVNEEELADFGKDIVHVVGRLTDDSFRPLQTNVLSGNCISYRDARVSELKEISG 400
Query: 363 LDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPE 422
+ +AA ++ +E G+ + + ++++ +
Sbjct: 401 NRDVSQGGTTSGLTAASAIAALQEAGSKLSRDMLKSAYRTFAKECYLVIELMRQFY---D 457
Query: 423 CEGADNPPVSLLKVEYT---SPLFKYQQAESVASAL 455
E VEY + + + +V
Sbjct: 458 EERVYRITGESGGVEYVPFSNAMLQAVPGGNVGGVQ 493
>gi|157828579|ref|YP_001494821.1| hypothetical protein A1G_03995 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801060|gb|ABV76313.1| hypothetical protein A1G_03995 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 111
Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG- 233
+YR F+ + +KW D K LA+N +E I+H V P+S + K KG
Sbjct: 1 MYRLFSMPIKAASAKWPDFA---DFKERLAKNPDETVKILHIVSPQSENQRGKGGKGKGL 57
Query: 234 -----FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALP 280
+ S+++ + E + + + FP+ V + ++YG +PA A+
Sbjct: 58 MTTLAYSSEYIYLSEQKIISQSGYSYFPFFVTLWIKGEGQVYGYAPAHHAIS 109
>gi|329663665|ref|NP_001039712.2| laminin subunit beta-2 [Bos taurus]
Length = 1802
Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 63/207 (30%), Gaps = 22/207 (10%)
Query: 354 KESIRSLF-LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF--IGAMISRE 410
+ ++ + R A E+ ++ + G ++ + +I
Sbjct: 1464 QAELQRALAEGGGILSQVAETRRQAGEAQQRAQAALDKAHASRGQVEQANQELRQLIQNV 1523
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV-VELGVKTG 469
D L +G P+ V L + SP Q A +A ++ + V L G
Sbjct: 1524 KDFLSQEGADPDSIEMVATRVLELSI-PASPEQIQQLAGEIAERVRSLADVDTILARTVG 1582
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQT 529
D R A R AE E +Q+ + E+ + Q
Sbjct: 1583 D------------VRR-AEQLLNDARRARSRAEGE---KQKAETVQAALEEAQRAQGAAQ 1626
Query: 530 SQDIGAKAAGRAMEKKLTHDMMENSYG 556
GA + E+ L H + E G
Sbjct: 1627 GAIQGAVVDTQDTEQTL-HQVQERMAG 1652
>gi|297459157|ref|XP_001790228.2| PREDICTED: laminin, beta 2 [Bos taurus]
Length = 1803
Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 63/207 (30%), Gaps = 22/207 (10%)
Query: 354 KESIRSLF-LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF--IGAMISRE 410
+ ++ + R A E+ ++ + G ++ + +I
Sbjct: 1465 QAELQRALAEGGGILSQVAETRRQAGEAQQRAQAALDKAHASRGQVEQANQELRQLIQNV 1524
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV-VELGVKTG 469
D L +G P+ V L + SP Q A +A ++ + V L G
Sbjct: 1525 KDFLSQEGADPDSIEMVATRVLELSI-PASPEQIQQLAGEIAERVRSLADVDTILARTVG 1583
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQT 529
D R A R AE E +Q+ + E+ + Q
Sbjct: 1584 D------------VRR-AEQLLNDARRARSRAEGE---KQKAETVQAALEEAQRAQGAAQ 1627
Query: 530 SQDIGAKAAGRAMEKKLTHDMMENSYG 556
GA + E+ L H + E G
Sbjct: 1628 GAIQGAVVDTQDTEQTL-HQVQERMAG 1653
>gi|297488687|ref|XP_002697087.1| PREDICTED: laminin, beta 2 (laminin S) [Bos taurus]
gi|296474911|gb|DAA17026.1| laminin, beta 2 (laminin S) [Bos taurus]
Length = 1802
Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 63/207 (30%), Gaps = 22/207 (10%)
Query: 354 KESIRSLF-LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF--IGAMISRE 410
+ ++ + R A E+ ++ + G ++ + +I
Sbjct: 1464 QAELQRALAEGGGILSQVAETRRQAGEAQQRAQAALDKAHASRGQVEQANQELRQLIQNV 1523
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV-VELGVKTG 469
D L +G P+ V L + SP Q A +A ++ + V L G
Sbjct: 1524 KDFLSQEGADPDSIEMVATRVLELSI-PASPEQIQQLAGEIAERVRSLADVDTILARTVG 1582
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQT 529
D R A R AE E +Q+ + E+ + Q
Sbjct: 1583 D------------VRR-AEQLLNDARRARSRAEGE---KQKAETVQAALEEAQRAQGAAQ 1626
Query: 530 SQDIGAKAAGRAMEKKLTHDMMENSYG 556
GA + E+ L H + E G
Sbjct: 1627 GAIQGAVVDTQDTEQTL-HQVQERMAG 1652
>gi|21234402|ref|NP_640321.1| hypothetical protein VpV262p60 [Vibrio phage VpV262]
gi|21064915|gb|AAM28399.1| hypothetical protein [Vibrio phage VpV262]
Length = 599
Score = 51.4 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 53/599 (8%), Positives = 159/599 (26%), Gaps = 94/599 (15%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR---MW-DTTGSEACIKLSSLLSS 63
++ F ++N R + + +EL ++ + ++T KL+ L
Sbjct: 24 ELVVLFTNMENARAQKDREDKELMDYIDATDTRKTSNSKLPFKNSTTI---NKLA-HLHL 79
Query: 64 LITP-------PGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
+IT P + W + +A +++ + + S
Sbjct: 80 MITTSYMEHLLPNRNWVDFVGFDN------DSVNAEKREIARS--------YVRGKVEAS 125
Query: 117 GFVGCLQSFYTSVVEFGTGC--------FYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
G ++ G + A+ G + S+V+ V
Sbjct: 126 NLEGVIERMVDDFAVRGFCVAHTRHVKRMTVTAENQVIKNYSGTVTERLSPSDVFWDVTA 185
Query: 169 QNV------VDSVYREFTFTVDQIVSKWGDKVLSS------------------------- 197
++ + +Y + + + +
Sbjct: 186 DSLPKAAKCIRQLYTLGSLKREIEEGTFPLMSMEDFQKLREERRTIREALADGYNGRRKF 245
Query: 198 -KMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEK------ 250
+ + + D ++ ++ +++ ++V + + K
Sbjct: 246 DSLHKKGYGSMMNYINEGVVEVLTFMGDFYDEENDELWNNYEITVIDRKIIGRKQSKDTW 305
Query: 251 -QIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSE 309
V ++ + P +L++ N LHP V +
Sbjct: 306 DGSQNLHIAVYEFQKDT--LCPIGPLHRLTGMQYKLDKRENFREDLHDRFLHPSLKKVGD 363
Query: 310 AKQRNFDLKPGYMNIGALSREGRSLFQPVQF-GNPLPYHEELNRLKESIRSLFLLDLFQV 368
+++ P ++ + + + + P + L +++
Sbjct: 364 VREKGMRGGPNHVFEVEETGDVQYMTPPAEVLQPDNQLSITLQLMEDL---SGAPKESIG 420
Query: 369 LDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADN 428
++ E + + + + E + +++ L+ + + + N
Sbjct: 421 QRTAGEKTKFEVQLLDQGQNKVFRRKVKKFERELLTPVLNDYLEQGRNHLDASDTIKTFN 480
Query: 429 PPVS-----LLKVEYTSPLFK--YQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+ + + + + Q A A + + + + HM +
Sbjct: 481 SELGTATFLDITADDLNLNGQMVAQGATLFAEKANTLQNLNAILGGPLGAALAPHMSRTK 540
Query: 482 ---VSRFSLW--ATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGA 535
+ A I + + R ++ ++ E Q+++ + D G
Sbjct: 541 LFNAVEYLGDLDAYGIFTFGIGVQEDQQLARMAQKSTQQTEETALTQEEVGGPTTDTGQ 599
>gi|165933293|ref|YP_001650082.1| hypothetical protein RrIowa_0838 [Rickettsia rickettsii str. Iowa]
gi|165908380|gb|ABY72676.1| hypothetical protein RrIowa_0838 [Rickettsia rickettsii str. Iowa]
Length = 111
Score = 51.0 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG- 233
+YR F+ + +KW D K LA+N +E I+H V P+S + K KG
Sbjct: 1 MYRLFSMPIKAASAKWPDFA---DFKERLAKNPDETVKILHIVSPQSENQRGKGGKGKGL 57
Query: 234 -----FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALP 280
+ S+++ + E + + FP+ V + ++YG +PA A+
Sbjct: 58 MTTLAYSSEYIYLSEQKIISQSGYLYFPFFVTLWIKGEGQVYGYAPAHHAIS 109
>gi|157828580|ref|YP_001494822.1| hypothetical protein A1G_04000 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801061|gb|ABV76314.1| hypothetical protein A1G_04000 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 59
Score = 50.6 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 101 DQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEAD 142
+ + S F + F+ ++ FGT FY+E D
Sbjct: 4 QMIEKAIMDIFNNPASNFYNQIHQFFLNLAAFGTAIFYVEED 45
>gi|319776214|ref|YP_004138702.1| hypothetical protein HICON_18250 [Haemophilus influenzae F3047]
gi|317450805|emb|CBY87027.1| Putative uncharacterized protein [Haemophilus influenzae F3047]
Length = 731
Score = 50.2 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 47/421 (11%), Positives = 107/421 (25%), Gaps = 45/421 (10%)
Query: 165 SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD 224
S + VD++ +++ + + NE D
Sbjct: 260 SNDMDGYVDTLRTLSGLETQSKDNRYELWTYHGGIPLNVLSGANELLG--EDNKLNIPDD 317
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEK----QIATFPYIVGRYRVRADEIYGRSPAMEALP 280
++ N V + A FPY V ++G
Sbjct: 318 EESRAANLEIEGVIVMAGNGKILSVNLNPLDTAEFPYSVYTCEPDVCCLFGFGIPYLCRD 377
Query: 281 TIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFD----LKPGYMNIGALSREGRSLFQ 336
LN + G L + P V+ + D L P + + F+
Sbjct: 378 AQEILNTAWRGMIDNGILGI-GPQAVVNSSVLTPVDGNWELAPYKLWKTNDRATVNAQFE 436
Query: 337 PVQFGNPLPYHEELNRLKESIR--SLFLLDL--FQVLDDKASRSAAESMEKTREKGAFVG 392
+ L I+ F+ + ++ ++
Sbjct: 437 AQRAFGIFDIGSRQQELANIIQLSKSFMDEESGLPMIAQGEQGQVTPTLGGMSMLM-NAA 495
Query: 393 PLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVA 452
+ Q + +++ L + N+ E + + TS L +
Sbjct: 496 NAVRRRQVKEWDDSVTKPLIRRFYEYNMNMSEDSSIKGDMQVVARGTSAL--------LV 547
Query: 453 SALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNT-PAVLIRDTAEVEDIRQQRE 511
Q + P M D ++ + + + ++ E E Q+ +
Sbjct: 548 KETQTAQIIDIFQKFGQHPQLMYAFDWYDGAKTLMQSMSMGTQTMLIPREEYEQKLQEIQ 607
Query: 512 VQRRVMEE--------------------QHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMM 551
+ + + +Q++ +Q + + EK+L ++
Sbjct: 608 EAQAQQPQDPEILKVQMQMQIAQQKQQHEMQLEQMRTQAQLQIEQMKVQIREKELEIKVL 667
Query: 552 E 552
E
Sbjct: 668 E 668
>gi|56551276|ref|YP_162115.1| hypothetical protein ZMO0380 [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542850|gb|AAV89004.1| hypothetical protein ZMO0380 [Zymomonas mobilis subsp. mobilis ZM4]
Length = 729
Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 42/342 (12%), Positives = 95/342 (27%), Gaps = 36/342 (10%)
Query: 244 NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPP 303
+ +++ P++V RA + G S A + + R + + + + P
Sbjct: 317 DVLLSIEEVDEAPFVVWTPFPRAHRMIGNSLAEKVMDIQRVKSVLMRQALDGVYQTNAPR 376
Query: 304 TIAVSEAKQRN-----FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKE--- 355
+ + ++PG + L L E + +E
Sbjct: 377 MAVNVDGLTEDTFDDLLTIRPGAIVRYRGGIPPTPLNAGFDIQKSLGMIEYMQSAQESRT 436
Query: 356 ---SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
+ D + A+ + +G L + + MI+
Sbjct: 437 GITRLNQGLDADSLNKTATGQALLQAQGQQMEEYVARNFAQSLGRLFQKKLWLMIASGDP 496
Query: 413 ILDS-QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
+ +G + A PP ++V L ++ + +A Q ++ +
Sbjct: 497 MAIKVEGLYKTVDPALWPPDMRVRVTV--GLGSGRKDQRLAYRQQLLSIQQQALAVGLTG 554
Query: 472 SCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR-------EVQR---------- 514
S + + + R P + D Q +
Sbjct: 555 SKQIYNNIAAMIRDCG--LGNPTDYLIDPDIRLAGNQAENPVNNNSAAAQNSSGSVGNNP 612
Query: 515 ---RVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMEN 553
+ Q + Q Q+ + D A A++K+ T +
Sbjct: 613 DYTELKARQDINLQGQKMAADQERSMAEFALKKQETEAKLAM 654
>gi|241760934|ref|ZP_04759023.1| hypothetical protein ZmobDRAFT_0099 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241374553|gb|EER64014.1| hypothetical protein ZmobDRAFT_0099 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 729
Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/341 (12%), Positives = 93/341 (27%), Gaps = 34/341 (9%)
Query: 244 NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPP 303
+ +++ P++V RA + G S A + + R + + + + P
Sbjct: 317 DVLLSIEEVDEAPFVVWTPFPRAHRMIGNSLAEKVMDIQRVKSVLMRQALDGVYQTNAPR 376
Query: 304 TIAVSEAKQRN-----FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKE--- 355
+ + ++PG + L L E + +E
Sbjct: 377 MAVNVDGLTEDTFDDLLTIRPGAIVRYRGGIPPTPLNAGFDIQKSLGMIEYMQSAQESRT 436
Query: 356 ---SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
+ D + A+ + +G L + + MI+
Sbjct: 437 GITRLNQGLDADSLNKTATGQALLQAQGQQMEEYVARNFAQSLGRLFQKKLWLMIASGDP 496
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
+ L + P ++V T L ++ + +A Q ++ + S
Sbjct: 497 MAIKVEGLYKTVDPALWPP-DMRVRVTVGLGSGRKDQRLAYRQQLLSIQQQALAVGLTGS 555
Query: 473 CMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR-------EVQR----------- 514
+ + + R P + D Q +
Sbjct: 556 KQIYNNIAAMIRDCG--LGNPTDYLIDPDIRLAGNQAENPVNNNSAAAQNSSGSVGNNPD 613
Query: 515 --RVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMEN 553
+ Q + Q Q+ + D A A++K+ T +
Sbjct: 614 YTELKARQDINLQGQKMAADQERSMAEFALKKQETEAKLAM 654
>gi|260753098|ref|YP_003225991.1| hypothetical protein Za10_0861 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552461|gb|ACV75407.1| hypothetical protein Za10_0861 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 729
Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/341 (12%), Positives = 93/341 (27%), Gaps = 34/341 (9%)
Query: 244 NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPP 303
+ +++ P++V RA + G S A + + R + + + + P
Sbjct: 317 DVLLSIEEVDEAPFVVWTPFPRAHRMIGNSLAEKVMDIQRVKSVLMRQALDGVYQTNAPR 376
Query: 304 TIAVSEAKQRN-----FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKE--- 355
+ + ++PG + L L E + +E
Sbjct: 377 MAVNVDGLTEDTFDDLLTIRPGAIVRYRGGIPPTPLNAGFDIQKSLGMIEYMQSAQESRT 436
Query: 356 ---SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
+ D + A+ + +G L + + MI+
Sbjct: 437 GITRLNQGLDADSLNKTATGQALLQAQGQQMEEYVARNFAQSLGRLFQKKLWLMIASGDP 496
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
+ L + P ++V T L ++ + +A Q ++ + S
Sbjct: 497 MAIKVEGLYKTVDPALWPP-DMRVRVTVGLGSGRKDQRLAYRQQLLSIQQQALAVGLTGS 555
Query: 473 CMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR-------EVQR----------- 514
+ + + R P + D Q +
Sbjct: 556 KQIYNNIAAMIRDCG--LGNPTDYLIDPDIRLAGNQAENPVNNNSAAAQNSSGSVGNNPD 613
Query: 515 --RVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMEN 553
+ Q + Q Q+ + D A A++K+ T +
Sbjct: 614 YTELKARQDINLQGQKMAADQERSMAEFALKKQETEAKLAM 654
>gi|157828622|ref|YP_001494864.1| hypothetical protein A1G_04250 [Rickettsia rickettsii str.
'Sheila Smith']
gi|157801103|gb|ABV76356.1| hypothetical protein A1G_04250 [Rickettsia rickettsii str.
'Sheila Smith']
Length = 56
Score = 48.3 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACI 55
M+ + F+ LK++R + N +EL ++ P ++D+T + +
Sbjct: 1 MHDNELNKKIEYFDNLKSKREKWNQRWDELKRYVCPQ-TERNKVIFDSTSIGSLV 54
>gi|316995429|gb|ADU79210.1| hypothetical protein EcP1_gp59 [Enterobacter phage EcP1]
Length = 719
Score = 47.5 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 55/456 (12%), Positives = 130/456 (28%), Gaps = 76/456 (16%)
Query: 139 MEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS---VYREFTFTVDQIVSKWGDKVL 195
ME + K L+ + + NVY+ + Q +D V F ++ ++ K L
Sbjct: 220 MEKVTETKVLQNQPYVEVLNIENVYIDPSCQGDMDKATFVIHRFETSIAELKKSGNYKNL 279
Query: 196 SSKMKSALAR-----NENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS---------- 240
+++E T Y S +K+ + + +
Sbjct: 280 DKLTVKDSDELIPSISDDEIKTSTPTDYNISGKSRKRFNVTEYWGYYDIDDSGVLTPIVV 339
Query: 241 ---VDENRFFEEKQIA--TFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
D E P++V Y +YG A + + +
Sbjct: 340 AYVGDVKIRCSENPYPHGKPPFVVIPYLPMDSSVYGEPDAELIYDNQAIIGASTRAMIDL 399
Query: 296 GRLSLHP---------------PTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQF 340
S + +A +A+ + P I ++ P
Sbjct: 400 VARSANGQNIIRKDVFDPVNYRKFMAGEDAQSNPLN-VPLAEAIRTVTTPEVPSIIPGLI 458
Query: 341 GNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPL---IGG 397
E L+ + ++ + S ++ + +G
Sbjct: 459 QQQNNEAESLSGV-KAFSEGISSGSLGDVAAGIRGVLDASSKREMSILRRLKKGMVDLGR 517
Query: 398 LQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQG 457
+ ++ E I + + LKV+ ++P + Q++ +A +Q
Sbjct: 518 MIIAMNQEFLTDEEIIRITNDAFVHVKREALAGDFDLKVDISTPEAEQQKSNQLAFLVQT 577
Query: 458 VNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQ-------R 510
+ + +++ L + +V + ++
Sbjct: 578 IGNTIPF----------------EITKVLLTEI----SRLNKMPDVAQMIKEFEPTPDPL 617
Query: 511 EVQRRVMEEQHLQQQLQQTSQ------DIGAKAAGR 540
E Q++ +E LQQ++++++ G+ A +
Sbjct: 618 EEQKKQLELAKLQQEIKESAAREAYYLQRGSLATSQ 653
>gi|209548748|ref|YP_002280665.1| hypothetical protein Rleg2_1145 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534504|gb|ACI54439.1| hypothetical protein Rleg2_1145 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 612
Score = 47.1 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 48/507 (9%), Positives = 110/507 (21%), Gaps = 71/507 (14%)
Query: 72 WHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG------FVGCLQSF 125
WH + VR+ +T+ F +S F +
Sbjct: 133 WHTFEVDDGVLGERRPSPFDKVWDVRDRTPYLTNQGFSAEMIWKSREEWKLIFEDKAEEI 192
Query: 126 YTSVV------EFGTGCFYMEAD----------VDEKGLEEGIRYISVPLSNVYMSVNHQ 169
S++ G+G + + I++ + Y+ +
Sbjct: 193 -DSLINAGAPLVGGSGYSLLGERLRLVNGGSYYDKQFDELCVIKFDYRVAAKFYVYTSKD 251
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
V + + K E+ ++ Y D
Sbjct: 252 GKVFQTFDR---------------KEAEKNSQRGEEISEEKGYKVYTCYFSGDVM--LDW 294
Query: 230 GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
+ P + R + YG A N T+
Sbjct: 295 FESPYQLN---------PARGDFVDTPIVAFR-EELTGKPYGI--IRAARDPQNLYNRTL 342
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE 349
+ + + + + I ++ + F+ E
Sbjct: 343 SLIYWHSTSNRVVMDKGAVDKISKVATEIARADGIIEVNPGKKFDFE-NNTQRIQHLREI 401
Query: 350 LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGL------QSEFI 403
L ++ + + + ++S + + + ++ +
Sbjct: 402 LQVADMDVQKALGIYDEMMGVETNAKSGIAIQRRQAASQTTIALMFDRFLDAKYRWADKL 461
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESV------ASALQG 457
++ + + L K + V S +
Sbjct: 462 LWLVRATF---TDKNVFNVTDDDGVVKSVSLNEAVKGADGKDVTRQDVRVGTYDVSIEET 518
Query: 458 VNTVVELGVKTGD--PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRR 515
++ + + ++ + L P + EVE QQR
Sbjct: 519 MDVSSQNEESRIKMFELFTAGITPEQFTPGLLDIAGVPKNA-KLRKEVEASVQQRLANEA 577
Query: 516 VMEEQHLQQQLQQTSQDIGAKAAGRAM 542
M EQ + G A A
Sbjct: 578 QMREQMQKLGGGPQGITQGPAGAQPAA 604
>gi|153212119|ref|ZP_01947936.1| hypothetical protein A55_1887 [Vibrio cholerae 1587]
gi|124116915|gb|EAY35735.1| hypothetical protein A55_1887 [Vibrio cholerae 1587]
Length = 740
Score = 47.1 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 38/391 (9%), Positives = 93/391 (23%), Gaps = 48/391 (12%)
Query: 201 SALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQI-------- 252
++ H P+ + + + F S VD +
Sbjct: 297 QPTYKDRRYEIWEYHGPIPREVLQEAGLLTEEEFESTPSEVDGVIVMSGCGLILKAGINP 356
Query: 253 ---ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSE 309
+PY V I+G LN + G ++ +
Sbjct: 357 FDTEEWPYSVYCAEEDVSCIFGYGIPHLCSDAQSILNTAWRAMIDNGVATVGDQIVVNQS 416
Query: 310 AKQ---RNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIR--SLFLLD 364
A ++ P + + F+ + I F+ +
Sbjct: 417 ALMPADNDWSFSPLKVWKTTDKASVSAQFEAQKAFGVFSLQNRQAEYANIISMAKAFMDE 476
Query: 365 L--FQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPE 422
++ ++ + Q + +++ L N+
Sbjct: 477 ESGLPMISQGEQGQVTPTLGGMSMLM-NAANAVRRRQVKEWDDSVTKPLIRRFYAWNMQF 535
Query: 423 CEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD-HMDTDR 481
+ + + T+ L Q + + L + + D + +
Sbjct: 536 SKKNEIKGDMQIIARGTTAL-----LVKETQTAQLIELMDRLSSRPDAEAAFDFYFVYES 590
Query: 482 VSRFSLWATNTPAVLIRDTAEVEDIRQQREV--------------------QRRVMEEQH 521
+ + + ++R E E +Q + QR M+
Sbjct: 591 LVKSM--SMGA-RSVLRPREEYEAKLKQIQEAQQNQPQDPQLVIKEMEIALQREKMQHDE 647
Query: 522 LQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
+ + +A E ++ M+E
Sbjct: 648 TLAKFSAAMKQQETQAMLYREEMRMQQAMLE 678
>gi|149018527|gb|EDL77168.1| laminin, beta 2 [Rattus norvegicus]
Length = 1801
Score = 46.7 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 23/206 (11%)
Query: 354 KESIRSLFLLDLFQVLD-DKASRSAAESMEKTREKGAFVGPLIGGLQSEF--IGAMISRE 410
+ ++ + + + R A E+ ++ + G ++ + +I
Sbjct: 1463 QAELQRALVEGGGILSRVSETRRQAEEAQQRAQAALDKANASRGQVEQANQELRELIQNV 1522
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQ-AESVASALQGVNTV-VELGVKT 468
D L +G P+ V + + SP + Q+ A +A ++ + V L
Sbjct: 1523 KDFLSQEGADPDSIEMVATRVLDISI-PASP-EQIQRLASEIAERVRSLADVDTILAHTM 1580
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
GD R A R AE E Q+ + E+ + Q
Sbjct: 1581 GD------------VRR-AEQLLQDAQRARSRAEGER---QKAETVQAALEEAQRAQGAA 1624
Query: 529 TSQDIGAKAAGRAMEKKLTHDMMENS 554
GA + E+ L +
Sbjct: 1625 QGAIRGAVVDTKNTEQTLQQVQERMA 1650
>gi|6981142|ref|NP_037106.1| laminin subunit beta-2 precursor [Rattus norvegicus]
gi|126371|sp|P15800|LAMB2_RAT RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin chain B3;
AltName: Full=Laminin-11 subunit beta; AltName:
Full=Laminin-14 subunit beta; AltName: Full=Laminin-15
subunit beta; AltName: Full=Laminin-3 subunit beta;
AltName: Full=Laminin-4 subunit beta; AltName:
Full=Laminin-7 subunit beta; AltName: Full=Laminin-9
subunit beta; AltName: Full=S-laminin subunit beta;
Short=S-LAM beta; Flags: Precursor
gi|57251|emb|CAA34561.1| precursor (AA -35 to 1766) [Rattus norvegicus]
Length = 1801
Score = 46.7 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 23/206 (11%)
Query: 354 KESIRSLFLLDLFQVLD-DKASRSAAESMEKTREKGAFVGPLIGGLQSEF--IGAMISRE 410
+ ++ + + + R A E+ ++ + G ++ + +I
Sbjct: 1463 QAELQRALVEGGGILSRVSETRRQAEEAQQRAQAALDKANASRGQVEQANQELRELIQNV 1522
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQ-AESVASALQGVNTV-VELGVKT 468
D L +G P+ V + + SP + Q+ A +A ++ + V L
Sbjct: 1523 KDFLSQEGADPDSIEMVATRVLDISI-PASP-EQIQRLASEIAERVRSLADVDTILAHTM 1580
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
GD R A R AE E Q+ + E+ + Q
Sbjct: 1581 GD------------VRR-AEQLLQDAQRARSRAEGER---QKAETVQAALEEAQRAQGAA 1624
Query: 529 TSQDIGAKAAGRAMEKKLTHDMMENS 554
GA + E+ L +
Sbjct: 1625 QGAIRGAVVDTKNTEQTLQQVQERMA 1650
>gi|226290|prf||1505373A laminin-like adhesive protein
Length = 1801
Score = 46.7 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 23/206 (11%)
Query: 354 KESIRSLFLLDLFQVLD-DKASRSAAESMEKTREKGAFVGPLIGGLQSEF--IGAMISRE 410
+ ++ + + + R A E+ ++ + G ++ + +I
Sbjct: 1463 QAELQRALVEGGGILSRVSETRRQAEEAQQRAQAALDKANASRGQVEQANQELRELIQNV 1522
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQ-AESVASALQGVNTV-VELGVKT 468
D L +G P+ V + + SP + Q+ A +A ++ + V L
Sbjct: 1523 KDFLSQEGADPDSIEMVATRVLDISI-PASP-EQIQRLASEIAERVRSLADVDTILAHTM 1580
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
GD R A R AE E Q+ + E+ + Q
Sbjct: 1581 GD------------VRR-AEQLLQDAQRARSRAEGER---QKAETVQAALEEAQRAQGAA 1624
Query: 529 TSQDIGAKAAGRAMEKKLTHDMMENS 554
GA + E+ L +
Sbjct: 1625 QGAIRGAVVDTKNTEQTLQQVQERMA 1650
>gi|218778476|ref|YP_002429794.1| hypothetical protein Dalk_0621 [Desulfatibacillum alkenivorans
AK-01]
gi|218759860|gb|ACL02326.1| protein of unknown function DUF323 [Desulfatibacillum alkenivorans
AK-01]
Length = 918
Score = 46.3 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 45/147 (30%), Gaps = 15/147 (10%)
Query: 407 ISRELDILDSQGNLPEC----EGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
I+ +L L +G P + + + L + S+++ Q +
Sbjct: 82 INSDLKRLYKEGKNPSGVIIGPENNFIMSDEAREALLATLAQTAGNGSLSALDQLAQMMN 141
Query: 463 ELGVKTGDPSCMDHMDTD-------RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRR 515
L D +D + D R+ R + + + R+ +
Sbjct: 142 TLKQILSDEDIIDSNNPDDALSQIHRLLRGISEKLGIDQEV----EDAREGVAVRQAEEG 197
Query: 516 VMEEQHLQQQLQQTSQDIGAKAAGRAM 542
E + + A+AAG+A+
Sbjct: 198 EDAELIASPEADGAGKGGDAEAAGKAL 224
>gi|307545235|ref|YP_003897714.1| Haemophilus-specific protein, uncharacterized [Halomonas elongata
DSM 2581]
gi|307217259|emb|CBV42529.1| Haemophilus-specific protein, uncharacterized [Halomonas elongata
DSM 2581]
Length = 749
Score = 46.3 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 30/325 (9%), Positives = 71/325 (21%), Gaps = 51/325 (15%)
Query: 247 FEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIA 306
+ PY ++ +G+ N T L +S P
Sbjct: 377 INRDPLERRPYHKSSFQPVPGSFWGQGIPELMADVQDVCNATARGLVNNLAISSGPQVEV 436
Query: 307 VSEAKQ---RNFDLKPGYM--NIGALSREGRSLFQPVQFGNPLP-YHEELNRLKESIRSL 360
+ Q D+ P + ++ + Q + + +
Sbjct: 437 YEDRLQPQEDPTDIYPWKIWRTKASIETGNNPALRFFQPQSNASELLAVYEQFEYRADES 496
Query: 361 FLLDLFQ---VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
+ + A ++A+ + I + + +I
Sbjct: 497 TNIPRYMYGSDEAGGAGQTASGLSMLMESANKGIKDAIRHIDRGVLRRVIEALWLHNMQF 556
Query: 418 GNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ + + +S + +Q Q ++L D + H
Sbjct: 557 -----SDDNSIKGDASVVARGSSAMLIREQ------TNQLRQQFLQLTANDYDMGILGHD 605
Query: 478 DTDRVSRFSLWATNTPAVLIRDTAEVED------------------------------IR 507
++ + P LI E++ R
Sbjct: 606 GRRKLLESIAEKLDLPG-LIPSEEEMQKNLAQQRQDQQAQLQMEQAKAEAEAAEKQARAR 664
Query: 508 QQREVQRRVMEEQHLQQQLQQTSQD 532
+ + E QQ+
Sbjct: 665 EANADAAQTEAETQQSQQMAPLEAQ 689
>gi|83646950|ref|YP_435385.1| chaperone activity ATPase ATP-binding subunit [Hahella chejuensis
KCTC 2396]
gi|83634993|gb|ABC30960.1| ATPase with chaperone activity, ATP-binding subunit [Hahella
chejuensis KCTC 2396]
Length = 919
Score = 45.6 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 63/208 (30%), Gaps = 13/208 (6%)
Query: 298 LSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQ---PVQFGNPLPYHEELNRLK 354
L++H +A + L Y+ L +G SL + + +
Sbjct: 380 LAIHHNVRISDDAIIQAVKLSARYIPGRQLPDKGVSLLDTACARVSLSQSATPSLIEDTR 439
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
I+ + ++ +S E++E E+ A + + Q+E IL
Sbjct: 440 RRIQQIDTNLDLISQENISSGEYHETLELLTEEKAVLEASLAA-QTEQWEKEKDLIAKIL 498
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD-PSC 473
+ + L + A P + E ++ N L GD P
Sbjct: 499 EVRTKLEQDYQAKKGPEDAGD--------RLSDEEVAELQVEFKNLFAALASAQGDQPLM 550
Query: 474 MDHMDTDRVSRFSLWATNTPAVLIRDTA 501
M H+D V+ T P +
Sbjct: 551 MPHVDGQAVAEVVANWTGIPVGKMVSDE 578
>gi|281357154|ref|ZP_06243643.1| hypothetical protein Vvad_PD2246 [Victivallis vadensis ATCC
BAA-548]
gi|281316185|gb|EFB00210.1| hypothetical protein Vvad_PD2246 [Victivallis vadensis ATCC
BAA-548]
Length = 752
Score = 45.6 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 82/304 (26%), Gaps = 39/304 (12%)
Query: 262 YRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAK----QRNFDL 317
YR D I+G A R +N + L+ P I ++A +
Sbjct: 426 YRANIDSIWGEGIADLLHHVQRSVNSLMRSRNNNLALAGAPQVIINTDAVRLKPGEPLQI 485
Query: 318 KPGYMNIGALSR--EGRSLFQPVQFGNPLP-YHEELNRLKESIRSLFLLDLFQV-----L 369
P + S + F+ +Q + EL + + + +
Sbjct: 486 TPFKQWFVSGSGYYGAQKPFELMQIPDVSDSLSRELEKELVFADRISGIPEYSQGVSKGA 545
Query: 370 DDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNP 429
++ A+ +A+ + I + +I + + N
Sbjct: 546 ENGAAGTASGLSMLLDAASNQIKDPINNIDEGLYEPLIRDLYY-----DKIND-PEVPNS 599
Query: 430 PVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVS---RFS 486
K+ + + +S + + V++ P + + + R
Sbjct: 600 AKGDFKIHARGAIGLAFKEQSQIRRREFFSLVLQ------SPLLQQILKPEGIVALTREV 653
Query: 487 LWATNTPAVLIRDTAE------------VEDIRQQREVQRRVMEEQHLQQQLQQTSQDIG 534
+ + P I + + Q + + +++ Q Q S
Sbjct: 654 VRTLDMPVNDIVTSETEFAAQQQQLQLQQQAAAAQSDELQAAIQQIDEQLAAGQISPQEA 713
Query: 535 AKAA 538
+A
Sbjct: 714 DRAK 717
>gi|31982223|ref|NP_032509.2| laminin subunit beta-2 precursor [Mus musculus]
gi|19913504|gb|AAH26051.1| Laminin, beta 2 [Mus musculus]
gi|148689344|gb|EDL21291.1| laminin, beta 2, isoform CRA_a [Mus musculus]
gi|148689345|gb|EDL21292.1| laminin, beta 2, isoform CRA_a [Mus musculus]
Length = 1799
Score = 45.6 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 23/206 (11%)
Query: 354 KESIRSLFLLDLFQVLD-DKASRSAAESMEKTREKGAFVGPLIGGLQSEF--IGAMISRE 410
+ ++ + + + R A E+ ++ + G ++ + +I
Sbjct: 1461 QAELQRALVEGGGILSRVSETRRQAEEAQQRAQAALDKANASRGQVEQANQELRELIQNV 1520
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQ-AESVASALQGVNTV-VELGVKT 468
D L +G P+ V + + SP + Q+ A +A ++ + V L
Sbjct: 1521 KDFLSQEGADPDSIEMVATRVLDISI-PASP-EQIQRLASEIAERVRSLADVDTILAHTM 1578
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
GD R A R AE E Q+ + E+ + Q
Sbjct: 1579 GD------------VRR-AEQLLQDAHRARSRAEGER---QKAETVQAALEEAQRAQGAA 1622
Query: 529 TSQDIGAKAAGRAMEKKLTHDMMENS 554
GA + E+ L +
Sbjct: 1623 QGAIWGAVVDTQNTEQTLQRVQERMA 1648
>gi|291618425|ref|YP_003521167.1| Hypothetical Protein PANA_2872 [Pantoea ananatis LMG 20103]
gi|291153455|gb|ADD78039.1| Hypothetical Protein PANA_2872 [Pantoea ananatis LMG 20103]
gi|327394819|dbj|BAK12241.1| hypothetical protein PAJ_2161 [Pantoea ananatis AJ13355]
Length = 353
Score = 44.8 bits (104), Expect = 0.039, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 21/187 (11%)
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
L FQ + S +A + +EK + +Q E L G
Sbjct: 150 LGTGFQAVGSGISAAAPSVTQMAKEKLQQNNINLDNMQQE--------LETTLRQTGKPE 201
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAES-VASALQGVNTVVELGVKTGDPSCMDHMDTD 480
+ + Q AE+ + T H DT
Sbjct: 202 LQPENLKQDANN----------EAQNAENQANNTANHPQTADTDLANWFKGVIARHSDTL 251
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE--QHLQQQLQQTSQDIGAKAA 538
+ + A + E E I Q E + + Q L++Q +Q +++ G +AA
Sbjct: 252 QAADRDALKNIIKARTGKSDQEAEQIVNQAEQSYQQAMQKYQELKKQAEQKAREAGEQAA 311
Query: 539 GRAMEKK 545
+
Sbjct: 312 KATAKAS 318
>gi|301770389|ref|XP_002920595.1| PREDICTED: laminin subunit beta-2-like [Ailuropoda melanoleuca]
Length = 1797
Score = 44.0 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 73/236 (30%), Gaps = 29/236 (12%)
Query: 325 GALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT 384
G L G + G EL R+L + R A E+ ++
Sbjct: 1437 GGLGCSGVVAMADLALGRARHTQAELQ------RALAEGGGILSHVAETRRQAGEAQQRA 1490
Query: 385 REKGAFVGPLIGGLQ--SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPL 442
R G ++ ++ + +I D L +G P+ V L + SP
Sbjct: 1491 RAALDKANASRGQVEKANQELRELIQSVKDFLSQEGADPDSIEMVATRVLELSI-PASP- 1548
Query: 443 FKYQQ-AESVASALQGVNTV-VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDT 500
+ Q A +A ++ + V L GD R A R
Sbjct: 1549 EQIQHLAGEIAERVRSLADVDTILARTVGD------------VRR-AEQLLQDARRARSR 1595
Query: 501 AEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
AE E +Q+ + E+ + Q GA + E+ L H + E G
Sbjct: 1596 AEGE---KQKAETVQAALEEAQRAQGAAQGAIQGAVVDTQDTERTL-HQVQEKMAG 1647
>gi|281338355|gb|EFB13939.1| hypothetical protein PANDA_009358 [Ailuropoda melanoleuca]
Length = 1805
Score = 44.0 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 73/236 (30%), Gaps = 29/236 (12%)
Query: 325 GALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT 384
G L G + G EL R+L + R A E+ ++
Sbjct: 1445 GGLGCSGVVAMADLALGRARHTQAELQ------RALAEGGGILSHVAETRRQAGEAQQRA 1498
Query: 385 REKGAFVGPLIGGLQ--SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPL 442
R G ++ ++ + +I D L +G P+ V L + SP
Sbjct: 1499 RAALDKANASRGQVEKANQELRELIQSVKDFLSQEGADPDSIEMVATRVLELSI-PASP- 1556
Query: 443 FKYQQ-AESVASALQGVNTV-VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDT 500
+ Q A +A ++ + V L GD R A R
Sbjct: 1557 EQIQHLAGEIAERVRSLADVDTILARTVGD------------VRR-AEQLLQDARRARSR 1603
Query: 501 AEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
AE E +Q+ + E+ + Q GA + E+ L H + E G
Sbjct: 1604 AEGE---KQKAETVQAALEEAQRAQGAAQGAIQGAVVDTQDTERTL-HQVQEKMAG 1655
>gi|282598927|ref|YP_003358477.1| N4 gp59-like protein [Pseudomonas phage LIT1]
gi|259048687|emb|CAZ66336.1| N4 gp59-like protein [Pseudomonas phage LIT1]
Length = 726
Score = 44.0 bits (102), Expect = 0.072, Method: Composition-based stats.
Identities = 42/421 (9%), Positives = 115/421 (27%), Gaps = 19/421 (4%)
Query: 142 DVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKS 201
D +++ + Y + ++ + ++S+ S +++
Sbjct: 253 DPSCGSDFSKAKFLIETFESSYAELKADGRYQNL-DKIQVEGQNLLSEPDYTGPSEGVRN 311
Query: 202 ALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGR 261
++++ + ++H + + + +V PY+V
Sbjct: 312 FDFQDKSRKRLVVHEYWG-YYDIHGDGVLHPIVATWVGAVMIRMEENPFPDKRIPYVVVN 370
Query: 262 YRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKP 319
Y R ++YG S + R + + S + + A
Sbjct: 371 YIPRKRDLYGESDGALLIDNQRIIGAVTRGMIDTMARSANGQVGVMKGALDVTNRRRFDR 430
Query: 320 G---YMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRS 376
G N GA R + + Y L + + + + +
Sbjct: 431 GENYEFNPGADPRAAVHMHTFPEIPQSAQYMINLQQAEAESMTGVKAFNAGISGAALGDT 490
Query: 377 AAESMEKTREKGAFVGPLIGGLQSEFIG----------AMISRELDILDSQGNLPECEGA 426
A ++ L + I + + + + +
Sbjct: 491 ATAVRGALDAASKRELGILRRLSAGIIEIGRKIIAMNAEFLDDVEVVRITNEHFVDIRRD 550
Query: 427 DNPPVSLLKVEYTSPLFKYQQAESVASALQGVN-TVVELGVKTGDPSCMDHMDTDRVSRF 485
D LK++ ++ + + LQ + + + + M+ ++
Sbjct: 551 DLAGNFDLKLDISTAEEDNAKVNDLTFMLQTMGPNMDPMMAQQIMGQIMELKKMPDFAKR 610
Query: 486 SLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGA-KAAGRAMEK 544
P + + A++E + Q +++ H +G +A RA+
Sbjct: 611 IREFQPQPDPIAQQKAQLELMLLQAQIEAERARAAHYMSGAGLQDSKVGTEQAKARALAS 670
Query: 545 K 545
+
Sbjct: 671 Q 671
>gi|73985821|ref|XP_533831.2| PREDICTED: similar to Laminin beta-2 chain precursor (S-laminin)
(Laminin B1s chain) [Canis familiaris]
Length = 1801
Score = 43.7 bits (101), Expect = 0.082, Method: Composition-based stats.
Identities = 42/285 (14%), Positives = 82/285 (28%), Gaps = 31/285 (10%)
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R+ L + + A++E P + + QP G
Sbjct: 1384 RKHKANQQALGKLSARTHSLSLTAINELVCGPPGDAPCATSPCGGAGCLDEDGQPRCGGL 1443
Query: 343 PLPYHEELNRL--------KESIRSLF-LLDLFQVLDDKASRSAAESMEKTREKGAFVGP 393
+ L + ++ + R A E+ ++ +
Sbjct: 1444 GCNGAVAMADLALGRARHTQAELQRALAEGGGILSQVAETRRQAGEAQQRAQAALDKANA 1503
Query: 394 LIGGLQ--SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQ-AES 450
G ++ ++ + +I D L +G P+ V L + SP + Q A +
Sbjct: 1504 SRGQVEKANQELRELIQSVKDFLSQEGADPDSIEMVATRVLELSI-PASP-EQIQHLAGA 1561
Query: 451 VASALQGVNTV-VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQ 509
+A ++ + V L GD R A R AE E +Q
Sbjct: 1562 IAERVRSLADVDTILARTVGD------------VRR-AEQLLQDARRARSRAEGE---KQ 1605
Query: 510 REVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENS 554
+ + E+ + Q GA + E+ L + +
Sbjct: 1606 KAETVQAALEEAQRAQGAAQGAIQGAVVDTQDTERTLHQVQAKMA 1650
>gi|282599474|ref|YP_003358364.1| N4 gp59-like protein [Pseudomonas phage LUZ7]
gi|259048573|emb|CAZ66223.1| N4 gp59-like protein [Pseudomonas phage LUZ7]
Length = 720
Score = 42.9 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 38/429 (8%), Positives = 105/429 (24%), Gaps = 30/429 (6%)
Query: 142 DVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKS 201
D G +++ + Y + ++ + I+S+ S +++
Sbjct: 247 DPSCNGDMNKAKFVVESFESSYAELKADGRYSNL-EKINEQNSDILSQPDYATGSESVRN 305
Query: 202 ALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGR 261
+ + + ++H + + + + V PY+V
Sbjct: 306 FDFADRSRKRLVVHEYWG-YYDIHGDGELHSIVATWVGQVLIRLELNPFPDGKIPYVVAA 364
Query: 262 YRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPP--TIAVSEAKQRNFDLKP 319
Y D +YG S + + + + S + + +
Sbjct: 365 YLPVKDSVYGDSDGSLLIDNQKIVGAISRGMIDIMAQSANGQVGFQKGALDITNRRRYER 424
Query: 320 G---YMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRS 376
G N G + Y +L+ + + +
Sbjct: 425 GETYEFNPGNNPATAIYTHTFQEIPRSAEYMLNQQQLEAESMTGVKAFNTGISGQALGDT 484
Query: 377 AAESMEKTREKGAFVGPLIGGLQS---EFIGAMISRELDILDSQGNLPECEGADNPPVSL 433
A ++ L E +I+ + LD + +
Sbjct: 485 ATGIRGALDAASKRELGILRRLSDCLIEVGRRVIAMNAEFLDDEEVIRITNEGFVTVRRD 544
Query: 434 LKVEY-----TSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM----DTDRVSR 484
+ S + VA + T+ + + + ++
Sbjct: 545 -DLAGEFDLRLSISTAEEDNAKVADLSFMLQTMGPNLEWGMNQLILSEIAELKKMPDLAH 603
Query: 485 FSLWATNTPAVL--IRDTAEVEDIRQQREVQRRVMEEQHL--------QQQLQQTSQDIG 534
P + + E+ + Q + ++ Q ++ +G
Sbjct: 604 RIRKYQPEPDPIAQRKAELEIALLEAQVQETLAKAQQAASTGYLNTSKAGTEGQKARALG 663
Query: 535 AKAAGRAME 543
++A ++
Sbjct: 664 SQADLADLD 672
>gi|119943823|ref|YP_941503.1| pentapeptide repeat-containing protein [Psychromonas ingrahamii 37]
gi|119862427|gb|ABM01904.1| pentapeptide repeat protein [Psychromonas ingrahamii 37]
Length = 976
Score = 42.5 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 18/202 (8%), Positives = 64/202 (31%), Gaps = 7/202 (3%)
Query: 330 EGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGA 389
Q + + + ++ + + ++ + + A E ++K +
Sbjct: 389 GDEEYKQVMGDNLSAFAEGKKQQAEQEMDEAIDKQVAELRANGMDKQADELLDKIKNPPQ 448
Query: 390 FVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKV-EYTSPLFKYQQA 448
+ + + + I + + L + + ++ +V + + + Q+
Sbjct: 449 DIELPEDAKKLQALTDKILPGISAMKEAPKLDDLDLTKLNLKAMDEVQAHMEAMAEKQKK 508
Query: 449 ESVASALQGVNTVVELGVKTGDPSCMDHMDT--DRVSRFSLWATNTPAVLIRDTAEVEDI 506
E++ Q ++ + + P + +D ++ P ++ VE
Sbjct: 509 EALLKVEQQLDELKQ--QAAQQPEMAEQLDPSIKQLEEMLASIDAIP--VLTRPDTVEQD 564
Query: 507 RQQREVQRRVMEEQHLQQQLQQ 528
Q + E+ Q+++
Sbjct: 565 TQLSAQLAQAAEQLTEQKKMMA 586
>gi|152982158|ref|YP_001354469.1| hypothetical protein mma_2779 [Janthinobacterium sp. Marseille]
gi|151282235|gb|ABR90645.1| Uncharacterized conserved protein (possible phage related tail
length tape measure protein) [Janthinobacterium sp.
Marseille]
Length = 901
Score = 42.1 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 36/274 (13%), Positives = 71/274 (25%), Gaps = 26/274 (9%)
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQF-GNPLPYHEELNRLKESIRS 359
P A E QR KP + + ++ Q + L R + ++ +
Sbjct: 339 APKIQADPELLQRL--TKPKAVKPAQDTTGAQTTLMKAQLDAEFALLKDGLTRQQTALDA 396
Query: 360 LFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGN 419
L V D ++A E E E L Q G + L
Sbjct: 397 ALEDRLVSVRDYYTQKTAIEQREVDAEIARKQQELARSQQVATTGKSENDRLR--AKAEV 454
Query: 420 LPECEGADNPPVSLLKVEYTSPLFKYQQAESVA-SALQGVNTVVELGVKTGDPSCMDHM- 477
+E + Q +A + Q + ++ D +
Sbjct: 455 AKSEADLITLNNRRTDIEQANARKAAQAERELADALAQAREELAQITGTATDADRQAAIE 514
Query: 478 ----------------DTDRVSRFSLWATNTPAVLIRDTAE---VEDIRQQREVQRRVME 518
D + + A L A+ V + + + + +
Sbjct: 515 RSYRDLRARLAAESDTDGVSLVDRLIDVKAAQANLAALEAQWRQVTERLRNAQEAIQTQQ 574
Query: 519 EQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
+ L + Q Q + + ++L M +
Sbjct: 575 QAGLLTEAQARQQIVALQQQSATEMERLLPTMQQ 608
>gi|238793398|ref|ZP_04637024.1| Uncharacterized mscS family protein [Yersinia intermedia ATCC
29909]
gi|238727367|gb|EEQ18895.1| Uncharacterized mscS family protein [Yersinia intermedia ATCC
29909]
Length = 1121
Score = 42.1 bits (97), Expect = 0.26, Method: Composition-based stats.
Identities = 27/228 (11%), Positives = 70/228 (30%), Gaps = 31/228 (13%)
Query: 332 RSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESM----EKTREK 387
+ +P+ + + E ++ + L L + +R +ES+ ++ E
Sbjct: 103 QEGDKPLPVPSNMSTSELEQQVLQISSQLLELSRLSQQEQDRAREISESLSQLPQQQSEA 162
Query: 388 GAFVGPLIGGLQSEFI--GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + LQ++ + + +L + A+ +S L L +
Sbjct: 163 RRILAEISARLQAQSNPANPVAQAQFALLQ-AEAVARKAKANELELSQLSANNRQELSRL 221
Query: 446 Q------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-TPAVLIR 498
+ + E V + LQ + + + + + P +I+
Sbjct: 222 RAELYKKRQERVDAQLQSLRNNLNNQRQQAAEQAL------ERTELLAEQGGDLPESIIK 275
Query: 499 ---DTAEVEDIRQQREV--------QRRVMEEQHLQQQLQQTSQDIGA 535
E+ Q+ QR+ + + +Q T ++
Sbjct: 276 ELQTNRELSQALNQQAQRIDLISSQQRQAVAQTQQVRQALSTIREQAQ 323
>gi|254729487|ref|YP_003084169.1| hypothetical protein PSS2_gp025 [Cyanophage PSS2]
gi|254211639|gb|ACT65587.1| hypothetical protein [Cyanophage PSS2]
gi|265524837|gb|ACY75729.1| predicted protein [Cyanophage PSS2]
Length = 518
Score = 42.1 bits (97), Expect = 0.26, Method: Composition-based stats.
Identities = 54/519 (10%), Positives = 142/519 (27%), Gaps = 82/519 (15%)
Query: 20 RGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESF 79
R E +E PYK ++ + +A + + Q + E
Sbjct: 48 RAEYLP--QEPGERDTPYKQRLGRSIYPSFYRDAIRAFA-----GLLSNYQ----IHEMP 96
Query: 80 SAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYM 139
++ + D R + ++ + + + + + G
Sbjct: 97 ASMEDADDNVDRRGSSLNKFLNSLDQLV---------------------LRDGGAAVLV- 134
Query: 140 EADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKM 199
E EEG + + + + + G +V++ +
Sbjct: 135 -EMPPETLDEEGNSLETSAMEEIEAARAP---WLVPIERQNLINWRTKVVDGREVVTMAV 190
Query: 200 KSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIV 259
+ ++ + V K + ++ E + + T P +
Sbjct: 191 IRTIEERQDPK-NAFGTVLEPIYLLLTPGAWQKIRLVRGATMKWEMVVEAEGVTTLPVVP 249
Query: 260 GRYRVRADEIY-GRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLK 318
+ + G S + L + + T+ L P ++Q
Sbjct: 250 LVWYGATGSQFAGGSLPLSGLADLSIQHFTLRSDLVELIHRLALPVPVRKGSQQLPDGSY 309
Query: 319 P----GYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKAS 374
P G + L G F + + + E+ ++ + L ++ +
Sbjct: 310 PPMVLGPNSGMDLPENGDFKFAELSGSSLAQHQVEVEHVEALMDRSSLSFMYGSTGNG-- 367
Query: 375 RSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLL 434
R+A E++ + + + V LI Q+ + + L + + ++
Sbjct: 368 RTATEAVLQGSQVASQVRTLIENKQA------MFGLIMKLWTTYMAEDLSEEAGLDIND- 420
Query: 435 KVEYTSPLFKYQQAESVASALQG-----VNTVVELGVKTGDPSCMDHMDTDRVSRFSLWA 489
+ + + +A+ V + L ++ LG + +D +
Sbjct: 421 -----NLIARPLEAQEVQAYLALFGGDLLSHETTLGELQKGQALSQDIDLE--------- 466
Query: 490 TNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
E+ + +R+ + E + +
Sbjct: 467 -----------EEIARVTDERKARAEEAMEMMQETGGED 494
>gi|302527178|ref|ZP_07279520.1| von Willebrand factor [Streptomyces sp. AA4]
gi|302436073|gb|EFL07889.1| von Willebrand factor [Streptomyces sp. AA4]
Length = 652
Score = 41.7 bits (96), Expect = 0.31, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 54/212 (25%), Gaps = 37/212 (17%)
Query: 341 GNPLPYHEELNRLKESIRSLFLLDLFQ-------VLDDKASRSAAESME------KTREK 387
G + L ++ R D LD +AA E ++ E
Sbjct: 83 GTLQEVQQLLQEALQAERRELFPDPDDEARFREAQLDALPPGTAAAVRELNEYDWRSDEA 142
Query: 388 GAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPL--FKY 445
+ L E + A + + G +L + L
Sbjct: 143 RQKYEQIRDLLGREMLDARFQGMKQAMQNAG-----PEDVERINQMLG--DLNALLSAHA 195
Query: 446 QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
Q A + + + G + + D + + ++ +E
Sbjct: 196 QGASDID--ERFSEFMRRHGEFFPENP----QNVDELIDVLAARSAAAQRMLNSMSE--- 246
Query: 506 IRQQREVQRRVMEEQ----HLQQQLQQTSQDI 533
+QR + ++ L QQL +
Sbjct: 247 --EQRAELAELAQQAFGDPRLAQQLSALDSQL 276
>gi|221504668|gb|EEE30341.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 522
Score = 41.7 bits (96), Expect = 0.31, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 21/190 (11%)
Query: 309 EAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQV 368
A+ + F L+ G + + + + L+ I F + +
Sbjct: 216 SAETQAFQLRRGAEIVIGTPGRVKDCLEKAYTVLNQCNYVVLDEADRMIDMGFEEIVNFI 275
Query: 369 LDDKAS---RSAAESMEKTREKGAFVGPLIGGLQ---SEFIGAMISREL-DILDSQGNLP 421
LD + +S E++ +E A G + L S + + R L +
Sbjct: 276 LDQIPTSNLKSNDEALILQQEMQAKAGHRLYRLTQMFSATMPPAVERLARKYLRQPSYIS 335
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+ +VE+ K Q+ + V + P M ++ +
Sbjct: 336 IGDPGAGKRAIEQRVEFVPEARKKQRLQDV------LENAT--------PPVMVFVNQKK 381
Query: 482 VSRFSLWATN 491
+
Sbjct: 382 SADALAKVLG 391
>gi|302035504|ref|YP_003795826.1| putative phage tail length tape measure protein [Candidatus
Nitrospira defluvii]
gi|300603568|emb|CBK39898.1| putative Phage tail length tape measure protein [Candidatus
Nitrospira defluvii]
Length = 901
Score = 41.7 bits (96), Expect = 0.32, Method: Composition-based stats.
Identities = 36/274 (13%), Positives = 71/274 (25%), Gaps = 26/274 (9%)
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQF-GNPLPYHEELNRLKESIRS 359
P A E QR KP + + ++ Q + L R + ++ +
Sbjct: 339 APKIQADPELLQRL--TKPKAVKPAQDTTGAQTTLMKAQLDAEFALLKDGLARQQTALDA 396
Query: 360 LFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGN 419
L V D ++A E E E L Q G + L
Sbjct: 397 ALEDRLVSVRDYYTQKTALEQREVDAEIARKQQELARSQQVVTTGKSENDRLKAKAEVAK 456
Query: 420 LPECEGADNPPVSLLKVEYTSPLFKYQQAESVA-SALQGVNTVVELGVKTGDPSCMDHM- 477
+E + Q +A + Q + ++ D +
Sbjct: 457 --AEADLITLNNRRTDIEQANARKAAQAERELADALAQAREELAQITGTATDTDRQAAIE 514
Query: 478 ----------------DTDRVSRFSLWATNTPAVLIRDTAE---VEDIRQQREVQRRVME 518
D + + A L A+ V + + + + +
Sbjct: 515 RSYRDLRARLAAESDADGVSLIDRLINVKAAQANLAALEAQWRQVTERLRNAQEAIQTQQ 574
Query: 519 EQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
+ L + Q Q + + ++L M +
Sbjct: 575 QAGLLTEAQARQQIVALQQQSATEMERLLPTMQQ 608
>gi|71281799|ref|YP_269191.1| sensor histidine kinase/response regulator [Colwellia
psychrerythraea 34H]
gi|71147539|gb|AAZ28012.1| sensor histidine kinase/response regulator [Colwellia
psychrerythraea 34H]
Length = 784
Score = 41.7 bits (96), Expect = 0.34, Method: Composition-based stats.
Identities = 17/211 (8%), Positives = 57/211 (27%), Gaps = 11/211 (5%)
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGA 405
++ + + S E + + + + + +
Sbjct: 110 IRLPEQVVEGKVMKSSFGLSIPNKRVGNNDSQNEQSNRRQLGTLIIATNLATIHARLWQT 169
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
+ L+ + + +E + K + + L
Sbjct: 170 GFNILLNQTLLVVLIMLVIMFILQRLITRHLESMAGYSKAIGDGDLEAPLTL-----SRR 224
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
++ R ++ + R E + +R R+ ++++E + + Q
Sbjct: 225 QPNFPDELNQLVNALNDMRLAIRH-----DINRREEEKQALRYNRDQLQQMVERRTMSLQ 279
Query: 526 LQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
+ + KA + + ++H++ G
Sbjct: 280 QAKEIAEEANKAKSQFL-ATMSHEIRTPMNG 309
>gi|238750060|ref|ZP_04611563.1| Uncharacterized mscS family protein [Yersinia rohdei ATCC 43380]
gi|238711604|gb|EEQ03819.1| Uncharacterized mscS family protein [Yersinia rohdei ATCC 43380]
Length = 1113
Score = 41.3 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 65/222 (29%), Gaps = 19/222 (8%)
Query: 332 RSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESM----EKTREK 387
+ + +P+ + + E ++ + L L+ + +R +ES+ ++ E
Sbjct: 97 QEVDKPLPVPSNMSTSELEQQVLQISSQLLELNRLSQQEQDRAREISESLSQLPQQQSEA 156
Query: 388 GAFVGPLIGGLQSEF--IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + LQ++ + + +L + A+ +S L L +
Sbjct: 157 RRILAEIGSRLQAQSSPTNPVTQAQFALLQ-AEAVARKAKANELELSQLSANNRQELSRL 215
Query: 446 QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-----TPAVLIRDT 500
+ + + L + + L +
Sbjct: 216 RAELYKKRQERVDAQLQTLRNNLNNQRQQAAEKALERTELLAEQGGDLPESITQQLQINR 275
Query: 501 AEVEDIRQQRE-------VQRRVMEEQHLQQQLQQTSQDIGA 535
+ + QQ + QR+ + + +Q T ++
Sbjct: 276 ELSQALNQQAQRIDLISSQQRQAVAQTQQVRQALSTIREQAQ 317
>gi|21436526|emb|CAD29630.1| putative chitin binding protein [Anopheles gambiae]
Length = 567
Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 66/253 (26%), Gaps = 35/253 (13%)
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
+ S P ++ + + P + + +PV+F
Sbjct: 91 KGVPSSASPVYMSPASSLMTKATSLPLGVPPFRPIPKPTPEAEPVRFDP----------- 139
Query: 354 KESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDI 413
+R F L Q D +S + G + I
Sbjct: 140 -SVLRRNFALKTAQTPDPS-----FQSQLMNQTSSFHRGGAAIRTAPASPFPSAPNQQII 193
Query: 414 LDSQG-NLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP- 471
Q + + P S+ ++ T P+ + ++ + ++ TG P
Sbjct: 194 YKEQNLQVQKVPAFQAMPESVSRIS-TGPVVQVDNKLQPSAIKNSIMSIPPRRQMTGKPG 252
Query: 472 -----------SCMDHMD-TDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
+ +D A N +I+ E +RQQ ++ E+
Sbjct: 253 PTIATGSATTGDAAEEIDLMGHTVEELAAAANVSVEVIK---EAIRVRQQELRAQKQYEK 309
Query: 520 QHLQQQLQQTSQD 532
Q Q
Sbjct: 310 QQAAFAQTQFLAQ 322
>gi|156046663|ref|XP_001589710.1| hypothetical protein SS1G_09432 [Sclerotinia sclerotiorum 1980]
gi|154693827|gb|EDN93565.1| hypothetical protein SS1G_09432 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1631
Score = 41.0 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 23/228 (10%), Positives = 61/228 (26%), Gaps = 11/228 (4%)
Query: 320 GYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLF--QVLDDKASRSA 377
G I + Q G+ P L L++ + + + +++ +
Sbjct: 1257 GERGISPVGASRNRGLSSPQSGSNTPDMARLRELEQQLAASMHAHQEIKEAFENREQEAE 1316
Query: 378 AESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVE 437
+ EK + + + M+ R D L
Sbjct: 1317 SAYREKLSQLENDYQSAV--HYVKGTEKMLKRMKDELSRYKQDNTRLKEQLTAAEERSAA 1374
Query: 438 YTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLI 497
SP + + ++ + + + D V + N+ + L+
Sbjct: 1375 SRSPTSWESERAGLVGQIETLQSEINSSAAQMHKELAD------VQKELQDTQNSHSDLM 1428
Query: 498 RDTAEV-EDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEK 544
R E+ + + E R + + + + + +++
Sbjct: 1429 RSHEELKKQLASTSEQARHELGQLQEENAQLEKRAQDAEEKVSLLLDQ 1476
>gi|119509792|ref|ZP_01628936.1| PBS lyase HEAT-like repeat protein [Nodularia spumigena CCY9414]
gi|119465527|gb|EAW46420.1| PBS lyase HEAT-like repeat protein [Nodularia spumigena CCY9414]
Length = 936
Score = 41.0 bits (94), Expect = 0.53, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 69/224 (30%), Gaps = 22/224 (9%)
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
+ L +++ ++ + L + D +AA+++ + + K + S++
Sbjct: 107 RRAAAQALGQMQAKEQAPQVALLLKDSDPDVRYAAAQALGQMQAKEVVPQVALLLKDSDW 166
Query: 403 IGAMIS-RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGV--- 458
+ + L + ++ +P+ ++ L + Q E V +
Sbjct: 167 NVRNAAAQALGQMQAKEVVPQVALLLKDSDPNVRRAAAYALGQMQAKEVVPQVALLLKDS 226
Query: 459 ---------NTVVELGVKTGDPSCMDHM-DTDRVSRFSLW-ATN-------TPAVLIRDT 500
+ ++ K P + D+D R + A P V +
Sbjct: 227 DWNVRNAAAQALGQMQAKEVVPQVALLLKDSDWNVRNAAAQALGQMQAKEVVPQVALLLK 286
Query: 501 AEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEK 544
++R M+ + Q+ +D + A +
Sbjct: 287 DSDWNVRNAAAQALGQMQAKEQAPQVALLLKDSDSDVRSVAAQA 330
Score = 39.8 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 63/206 (30%), Gaps = 29/206 (14%)
Query: 373 ASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS-RELDILDSQGNLPECEGADNPPV 431
+ +AAE++ + + K + SE + + L + ++ P+
Sbjct: 75 SRSAAAEALGQMQAKEVVPQLALLLKDSETYVRRAAAQALGQMQAKEQAPQVALLLKDSD 134
Query: 432 SLLKVEYTSPLFKYQQAESVASALQGV------------NTVVELGVKTGDPSCMDHM-D 478
++ L + Q E V + + ++ K P + D
Sbjct: 135 PDVRYAAAQALGQMQAKEVVPQVALLLKDSDWNVRNAAAQALGQMQAKEVVPQVALLLKD 194
Query: 479 TDRVSRFSLW-ATN-------TPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTS 530
+D R + A P V + ++R M+ + + Q+
Sbjct: 195 SDPNVRRAAAYALGQMQAKEVVPQVALLLKDSDWNVRNAAAQALGQMQAKEVVPQVALLL 254
Query: 531 QD-------IGAKAAGRAMEKKLTHD 549
+D A+A G+ K++
Sbjct: 255 KDSDWNVRNAAAQALGQMQAKEVVPQ 280
Score = 37.5 bits (85), Expect = 6.7, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 73/239 (30%), Gaps = 35/239 (14%)
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
E L +++ L L + + R+AA+++ + + K P + L +
Sbjct: 76 RSAAAEALGQMQAKEVVPQLALLLKDSETYVRRAAAQALGQMQAKEQ--APQVALLLKDS 133
Query: 403 IGAMIS----RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGV 458
+ + L + ++ +P+ ++ L + Q E V +
Sbjct: 134 -DPDVRYAAAQALGQMQAKEVVPQVALLLKDSDWNVRNAAAQALGQMQAKEVVPQVALLL 192
Query: 459 N------------TVVELGVKTGDPSCMDHM-DTDRVSRFSLW-ATN-------TPAVLI 497
+ ++ K P + D+D R + A P V +
Sbjct: 193 KDSDPNVRRAAAYALGQMQAKEVVPQVALLLKDSDWNVRNAAAQALGQMQAKEVVPQVAL 252
Query: 498 RDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQD-------IGAKAAGRAMEKKLTHD 549
++R M+ + + Q+ +D A+A G+ K+
Sbjct: 253 LLKDSDWNVRNAAAQALGQMQAKEVVPQVALLLKDSDWNVRNAAAQALGQMQAKEQAPQ 311
>gi|291334641|gb|ADD94289.1| portal protein [uncultured phage MedDCM-OCT-S04-C64]
Length = 755
Score = 40.6 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 47/426 (11%), Positives = 115/426 (26%), Gaps = 60/426 (14%)
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFH 235
+ E T +++ + + N T + + D +
Sbjct: 245 FDESAMTEEELARRNKTDEEEPFDYVSEESMRNYFITECYIKIDRDGDDIAE-LLRVTLA 303
Query: 236 SKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
+ +R +++ P+ + + YG S A + R + ++
Sbjct: 304 GGNYTSGSSRLLGIEEVDHMPFATCSPILMPHKFYGLSIADITMDLQRIKSVLTRQMLDN 363
Query: 296 GRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
L+ + T + +PG + P+ +
Sbjct: 364 TYLANNSRTAVNDSHVNLDDLLTSRPGGVVRYKGEGSASQYITPIPHNPLPNEAYTMMGY 423
Query: 354 KESIRSL-------FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+ +R L + + AA + + R K + ++G + + + +
Sbjct: 424 LDDVRRQRTGVGDETAGLGENSLSNVNTGVAALAFDAKRMKIELIARILGEVGFKDVFRL 483
Query: 407 ISRELDILDSQGNLPECEGADN---------PPVSLLKVEYTSPLFKYQQAESVASAL-Q 456
I + L + L G + ++V + + ++ ++ + + +
Sbjct: 484 IHKLLMKHQDRKMLLNVAGNFQAINPSEWRKRENTSVQV-GVGSVSRERRMVALETIMAK 542
Query: 457 GVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRD----------------- 499
+ G+ T + + R
Sbjct: 543 QNELIANGGMGTLVQPFQVY----QTLRDIADGFGLQPQAYFTDPRTLPPPPPPQPDAQA 598
Query: 500 ------------TAEVEDIRQQREVQRRVMEEQ------HLQQQLQQTSQDIGAKAAGRA 541
AE + R Q +V + E+Q L+QQ Q DI + A
Sbjct: 599 ELALTHARALVMDAESKMQRNQIDVAKAQAEQQIKFRELELRQQELQLKADIERQKAELV 658
Query: 542 MEKKLT 547
+ ++ T
Sbjct: 659 LLQRET 664
>gi|3540281|gb|AAC34383.1| All-1 related protein [Takifugu rubripes]
Length = 4823
Score = 40.6 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 20/244 (8%), Positives = 64/244 (26%), Gaps = 18/244 (7%)
Query: 329 REGRSLFQPVQFGNPLPYHEELNRLKESIRSLFL-------------LDLFQVLDDKASR 375
+ Q G+ ++ + L ++ + L +
Sbjct: 3209 SGPSTPSHVYQVGSANQLQQKKDHLNLQKQTGLMGNQQSMVQQQQQQPLLTPQRQGSVTD 3268
Query: 376 SAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLK 435
M E + Q M+ + + Q G P V
Sbjct: 3269 DKPSMMNIKEEGKTIDISVQQQQQQAVQNPMMQSQDSSMQLQVTGQPHPGQQQPVVMGHN 3328
Query: 436 VEYTSPLFKYQQAESVASALQGVNT-VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPA 494
+ + + ++Q+ +++ ++ + ++ + + N P
Sbjct: 3329 PQQQALMAQHQKQQAMMGIIRAQQQGITAQRPALQPGQIRTPVNIQAIIAQNPQLRNLPP 3388
Query: 495 VLIRDTAEVEDIRQQREVQR---RVMEEQHLQQQL-QQTSQDIGAKAAGRAMEKKLTHDM 550
+ ++Q + + M + ++ Q+ +G + ++ + M
Sbjct: 3389 NQQIQHIQAIIAQRQIQQGQMLRMAMGQGQIRPQMPPGQVLQVGQQHQSNMLQPGVNSQM 3448
Query: 551 MENS 554
+
Sbjct: 3449 QQGM 3452
>gi|195471922|ref|XP_002088251.1| GE18474 [Drosophila yakuba]
gi|194174352|gb|EDW87963.1| GE18474 [Drosophila yakuba]
Length = 1037
Score = 40.6 bits (93), Expect = 0.66, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 62/210 (29%), Gaps = 19/210 (9%)
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFV------GPLIGGLQSEF 402
+ +R L++ L L + S + S ++ + G L
Sbjct: 146 SAETSRTEMRDLYMKLLRNALGQSKNPSLSLSHKQKLARRQLQVQSQAQGQSYQQLARTT 205
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
I G ++ E + + Q++E + +Q + +
Sbjct: 206 DEEQIQGLAQSQQQSGLKQSLNQNEDQEDQ----EDVTSQAQAQKSERQSQLIQSTQSEI 261
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHL 522
+ ++ + + NT D E + + Q E Q + +
Sbjct: 262 QGQSQSQVQAQS----QAEAISQLQESENT-----TDDQEQAESQDQAESQAQAQTQVQS 312
Query: 523 QQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
Q Q Q++ G +A +++ L E
Sbjct: 313 QAQEQESLVQAGDQAKEDPIDQSLHQAQAE 342
>gi|307108830|gb|EFN57069.1| hypothetical protein CHLNCDRAFT_143822 [Chlorella variabilis]
Length = 796
Score = 40.6 bits (93), Expect = 0.70, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 444 KYQQAESV-ASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
+ SV ++ + + G + + + ++D +R + P + A
Sbjct: 699 RAPAMGSVRSAVRRFAAAFEDDGGFNAEDAALSNVDPKEAARRAAD----PVSALDIAAT 754
Query: 503 VEDIRQQREVQRRVMEEQHLQQ----QLQQTSQDIGAKAAGR 540
V ++ Q+ + + + +Q Q+ Q G AAG+
Sbjct: 755 VREVFQRVAAAQPQLMQAGSEQLTPVQMAALQQIFGQAAAGQ 796
>gi|22124533|ref|NP_667956.1| hypothetical protein y0619 [Yersinia pestis KIM 10]
gi|150260593|ref|ZP_01917321.1| putative membrane transport protein [Yersinia pestis CA88-4125]
gi|218927566|ref|YP_002345441.1| hypothetical protein YPO0363 [Yersinia pestis CO92]
gi|229840234|ref|ZP_04460393.1| putative membrane transport protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842312|ref|ZP_04462467.1| putative membrane transport protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903949|ref|ZP_04519062.1| putative membrane transport protein [Yersinia pestis Nepal516]
gi|21957330|gb|AAM84207.1|AE013664_2 putative periplasmic binding transport protein [Yersinia pestis KIM
10]
gi|115346177|emb|CAL19045.1| putative membrane transport protein [Yersinia pestis CO92]
gi|149290001|gb|EDM40078.1| putative membrane transport protein [Yersinia pestis CA88-4125]
gi|229679719|gb|EEO75822.1| putative membrane transport protein [Yersinia pestis Nepal516]
gi|229690622|gb|EEO82676.1| putative membrane transport protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696600|gb|EEO86647.1| putative membrane transport protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|320013772|gb|ADV97343.1| putative membrane transport protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 1119
Score = 40.6 bits (93), Expect = 0.73, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 62/228 (27%), Gaps = 25/228 (10%)
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+ L P + L + + L Q + S S + ++ E
Sbjct: 100 AQEGDKPLPVPSNLSTSDLEQQVLQVSSQLLELNRLSQQEQDRAREISESLGQLPQQQSE 159
Query: 387 KGAFVGPLIGGLQSEFI-GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + +QS+ +++ L + + +S L L +
Sbjct: 160 ARRMLAEIGPRIQSQSNPSTPVAQAQLTLLQAEAVARKAKVNELELSQLSANNRQELSRL 219
Query: 446 Q------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-----TPA 494
Q + V + LQ + + + + +
Sbjct: 220 QVELYKKREARVQAQLQSLRNNLNNQRQQAAEQAL------ERTELLAEQGGDLPESITQ 273
Query: 495 VLIRDTAEVEDIRQQRE-------VQRRVMEEQHLQQQLQQTSQDIGA 535
L R+ + + QQ + QR+ + + +Q T ++
Sbjct: 274 QLQRNRELSQALNQQVQRIDLISSQQRQAVAQTQQVRQALNTIREQAQ 321
>gi|108809911|ref|YP_653827.1| hypothetical protein YPA_3921 [Yersinia pestis Antiqua]
gi|108813468|ref|YP_649235.1| hypothetical protein YPN_3308 [Yersinia pestis Nepal516]
gi|165926747|ref|ZP_02222579.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936580|ref|ZP_02225148.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011886|ref|ZP_02232784.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213988|ref|ZP_02240023.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167400559|ref|ZP_02306068.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419121|ref|ZP_02310874.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423312|ref|ZP_02315065.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469168|ref|ZP_02333872.1| hypothetical protein YpesF_15059 [Yersinia pestis FV-1]
gi|270489063|ref|ZP_06206137.1| transporter, small conductance mechanosensitive ion channel (MscS)
family protein [Yersinia pestis KIM D27]
gi|294502472|ref|YP_003566534.1| membrane transport protein [Yersinia pestis Z176003]
gi|108777116|gb|ABG19635.1| membrane transport protein [Yersinia pestis Nepal516]
gi|108781824|gb|ABG15882.1| putative membrane transport protein [Yersinia pestis Antiqua]
gi|165915696|gb|EDR34305.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921370|gb|EDR38594.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989245|gb|EDR41546.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166204783|gb|EDR49263.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166963115|gb|EDR59136.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049927|gb|EDR61335.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167057482|gb|EDR67228.1| mechanosensitive ion channel domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|262360502|gb|ACY57223.1| membrane transport protein [Yersinia pestis D106004]
gi|262364449|gb|ACY61006.1| membrane transport protein [Yersinia pestis D182038]
gi|270337567|gb|EFA48344.1| transporter, small conductance mechanosensitive ion channel (MscS)
family protein [Yersinia pestis KIM D27]
gi|294352931|gb|ADE63272.1| membrane transport protein [Yersinia pestis Z176003]
Length = 1113
Score = 40.6 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 62/228 (27%), Gaps = 25/228 (10%)
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+ L P + L + + L Q + S S + ++ E
Sbjct: 94 AQEGDKPLPVPSNLSTSDLEQQVLQVSSQLLELNRLSQQEQDRAREISESLGQLPQQQSE 153
Query: 387 KGAFVGPLIGGLQSEFI-GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + +QS+ +++ L + + +S L L +
Sbjct: 154 ARRMLAEIGPRIQSQSNPSTPVAQAQLTLLQAEAVARKAKVNELELSQLSANNRQELSRL 213
Query: 446 Q------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-----TPA 494
Q + V + LQ + + + + +
Sbjct: 214 QVELYKKREARVQAQLQSLRNNLNNQRQQAAEQAL------ERTELLAEQGGDLPESITQ 267
Query: 495 VLIRDTAEVEDIRQQRE-------VQRRVMEEQHLQQQLQQTSQDIGA 535
L R+ + + QQ + QR+ + + +Q T ++
Sbjct: 268 QLQRNRELSQALNQQVQRIDLISSQQRQAVAQTQQVRQALNTIREQAQ 315
>gi|45440372|ref|NP_991911.1| hypothetical protein YP_0518 [Yersinia pestis biovar Microtus str.
91001]
gi|229836622|ref|ZP_04456788.1| putative membrane transport protein [Yersinia pestis Pestoides A]
gi|45435228|gb|AAS60788.1| putative membrane transport protein [Yersinia pestis biovar
Microtus str. 91001]
gi|229706306|gb|EEO92314.1| putative membrane transport protein [Yersinia pestis Pestoides A]
Length = 1119
Score = 40.6 bits (93), Expect = 0.78, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 62/228 (27%), Gaps = 25/228 (10%)
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+ L P + L + + L Q + S S + ++ E
Sbjct: 100 AQEGDKPLPVPSNLSTSDLEQQVLQVSSQLLELNRLSQQEQDRAREISESLGQLPQQQSE 159
Query: 387 KGAFVGPLIGGLQSEFI-GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + +QS+ +++ L + + +S L L +
Sbjct: 160 ARRMLAEIGPRIQSQSNPSTPVAQAQLTLLQAEAVARKAKVNELELSQLSANNRQELSRL 219
Query: 446 Q------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-----TPA 494
Q + V + LQ + + + + +
Sbjct: 220 QVELYKKREARVQAQLQSLRNNLNNQRQQAAEQAL------ERTELLAEQGGDLPESITQ 273
Query: 495 VLIRDTAEVEDIRQQRE-------VQRRVMEEQHLQQQLQQTSQDIGA 535
L R+ + + QQ + QR+ + + +Q T ++
Sbjct: 274 QLQRNRELSQALNQQVQRIDLISSQQRQAVAQTQQVRQALNTIREQAQ 321
>gi|310286713|ref|YP_003937971.1| Permease protein of ABC transporter system [Bifidobacterium bifidum
S17]
gi|309250649|gb|ADO52397.1| Permease protein of ABC transporter system [Bifidobacterium bifidum
S17]
Length = 1139
Score = 40.6 bits (93), Expect = 0.78, Method: Composition-based stats.
Identities = 33/267 (12%), Positives = 69/267 (25%), Gaps = 29/267 (10%)
Query: 297 RLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR---EGRSLFQPVQFGNPLPYHEELNRL 353
L+ A S+ + G+ + +
Sbjct: 275 SLASDYTFFAPSDGVTGDIYTAISLTVSGSTDEDAFGDDYDTLVRDVADR--IEATVQTK 332
Query: 354 KESIRSLFLLD----LFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
+++ R L+D A R ++ + E+ + Q++ +
Sbjct: 333 RQNERRQTLVDAAQKKLDQAKTDAYRQLDDAQMQITEQTEELK--TRREQAKTTKQSLED 390
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
+L L+ Q + V Q + + QG+ T +
Sbjct: 391 QLTQLEDQ------SEQLQDGKDQVNV------GLLQARQGQSQLQQGIATAQTMNDLAA 438
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRR------VMEEQHLQ 523
+ D + A P ++ + + Q R + LQ
Sbjct: 439 QGARAAEQAADAADQAVAGAQGLPETVLEPLRKAAKTARDLATQARSKADESAAQLTQLQ 498
Query: 524 QQLQQTSQDIGAKAAGRAMEKKLTHDM 550
QL Q + I A A ++ T +
Sbjct: 499 SQLSQVNATIAQLEAQSATLQRQTEQL 525
>gi|153949019|ref|YP_001402618.1| hypothetical protein YpsIP31758_3664 [Yersinia pseudotuberculosis
IP 31758]
gi|170026025|ref|YP_001722530.1| hypothetical protein YPK_3811 [Yersinia pseudotuberculosis YPIII]
gi|152960514|gb|ABS47975.1| mechanosensitive ion channel domain protein [Yersinia
pseudotuberculosis IP 31758]
gi|169752559|gb|ACA70077.1| MscS Mechanosensitive ion channel [Yersinia pseudotuberculosis
YPIII]
Length = 1113
Score = 40.6 bits (93), Expect = 0.80, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 62/228 (27%), Gaps = 25/228 (10%)
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+ L P + L + + L Q + S S + ++ E
Sbjct: 94 AQEGDKPLPVPSNLSTSDLEQQVLQVSSQLLELNRLSQQEQDRAREISESLGQLPQQQSE 153
Query: 387 KGAFVGPLIGGLQSEFI-GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + +QS+ +++ L + + +S L L +
Sbjct: 154 ARRMLAEIGPRIQSQSNPSTPVAQAQLTLLQAEAVARKAKVNELELSQLSANNRQELSRL 213
Query: 446 Q------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-----TPA 494
Q + V + LQ + + + + +
Sbjct: 214 QVELYKKREARVQAQLQSLRNNLNNQRQQAAEQAL------ERTELLAEQGGDLPESITQ 267
Query: 495 VLIRDTAEVEDIRQQRE-------VQRRVMEEQHLQQQLQQTSQDIGA 535
L R+ + + QQ + QR+ + + +Q T ++
Sbjct: 268 QLQRNRELSQALNQQVQRIDLISSQQRQAVAQTQQVRQALNTIREQAQ 315
>gi|145600859|ref|YP_001164935.1| hypothetical protein YPDSF_3612 [Yersinia pestis Pestoides F]
gi|162418708|ref|YP_001605289.1| hypothetical protein YpAngola_A0711 [Yersinia pestis Angola]
gi|145212555|gb|ABP41962.1| membrane transport protein [Yersinia pestis Pestoides F]
gi|162351523|gb|ABX85471.1| mechanosensitive ion channel domain protein [Yersinia pestis
Angola]
Length = 1113
Score = 40.6 bits (93), Expect = 0.80, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 62/228 (27%), Gaps = 25/228 (10%)
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+ L P + L + + L Q + S S + ++ E
Sbjct: 94 AQEGDKPLPVPSNLSTSDLEQQVLQVSSQLLELNRLSQQEQDRAREISESLGQLPQQQSE 153
Query: 387 KGAFVGPLIGGLQSEFI-GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + +QS+ +++ L + + +S L L +
Sbjct: 154 ARRMLAEIGPRIQSQSNPSTPVAQAQLTLLQAEAVARKAKVNELELSQLSANNRQELSRL 213
Query: 446 Q------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-----TPA 494
Q + V + LQ + + + + +
Sbjct: 214 QVELYKKREARVQAQLQSLRNNLNNQRQQAAEQAL------ERTELLAEQGGDLPESITQ 267
Query: 495 VLIRDTAEVEDIRQQRE-------VQRRVMEEQHLQQQLQQTSQDIGA 535
L R+ + + QQ + QR+ + + +Q T ++
Sbjct: 268 QLQRNRELSQALNQQVQRIDLISSQQRQAVAQTQQVRQALNTIREQAQ 315
>gi|186893774|ref|YP_001870886.1| hypothetical protein YPTS_0441 [Yersinia pseudotuberculosis PB1/+]
gi|186696800|gb|ACC87429.1| MscS Mechanosensitive ion channel [Yersinia pseudotuberculosis
PB1/+]
Length = 1113
Score = 40.6 bits (93), Expect = 0.81, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 62/228 (27%), Gaps = 25/228 (10%)
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+ L P + L + + L Q + S S + ++ E
Sbjct: 94 AQEGDKPLPVPSNLSTSDLEQQVLQVSSQLLELNRLSQQEQDRAREISESLGQLPQQQSE 153
Query: 387 KGAFVGPLIGGLQSEFI-GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + +QS+ +++ L + + +S L L +
Sbjct: 154 ARRMLAEIGPRIQSQSNPSTPVAQAQLTLLQAEAVARKAKVNELELSQLSANNRQELSRL 213
Query: 446 Q------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-----TPA 494
Q + V + LQ + + + + +
Sbjct: 214 QVELYKKREARVQAQLQSLRNNLNNQRQQAAEQAL------ERTELLAEQGGDLPESITQ 267
Query: 495 VLIRDTAEVEDIRQQRE-------VQRRVMEEQHLQQQLQQTSQDIGA 535
L R+ + + QQ + QR+ + + +Q T ++
Sbjct: 268 QLQRNRELSQALNQQVQRIDLISSQQRQAVAQTQQVRQALNTIREQAQ 315
>gi|160700609|ref|YP_001552284.1| hypothetical protein BA3_0015 [Thalassomonas phage BA3]
gi|157787728|gb|ABV74300.1| hypothetical protein BA3_0015 [Thalassomonas phage BA3]
Length = 711
Score = 40.2 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 41/330 (12%), Positives = 77/330 (23%), Gaps = 50/330 (15%)
Query: 272 RSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGY-------MNI 324
RS + R N + + L+ P I + D +
Sbjct: 353 RSIIRHSKDAQRMANYWDSAATETVALAPKAPFIGSEGNVEGREDEWEQANTKNFSLLTY 412
Query: 325 GALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT 384
+ + P E I+S + + S + +
Sbjct: 413 IPQYQGDPGPRRQPPAAVPAAELTLGQNSVEKIKSTMGMYDASLGAMGNETSGRAIIARQ 472
Query: 385 REKGAFVGPLIGGLQ---SEFIGAMISRELDILDSQG----NLPECEGADNPPVSLL--- 434
R+ I L ++ I D++ P+ +
Sbjct: 473 RQGDRGSFAFIDNLTKSIRRVGKILVEMIPHIYDTERVVRLKFPDETEDFVKLNEQIFDE 532
Query: 435 -----------------KVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
V T P F Q+ E+ + +Q V D +M
Sbjct: 533 ESGEWVTIHDLNVQKYDVVVTTGPAFATQRIEAAEAMIQFAQAVPSAAAVMAD-LIAQNM 591
Query: 478 DTDRVSRFSLWATN--TPAVLIRDTAEVEDIRQ-----------QREVQRRVMEEQHLQQ 524
D P ++ E E I + Q+ + + +
Sbjct: 592 DWPGA-DVIAERLKKIVPPNVL-SKDEREAIEEDMPEQTEPTPEQQVEMAKSQADMAQAE 649
Query: 525 QLQQTSQDIGAKAAGRAMEKKLTHDMMENS 554
+Q KA E + M+E+
Sbjct: 650 ADTAQAQADMLKAQLETEEAQKQLAMIEDM 679
>gi|301107205|ref|XP_002902685.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098559|gb|EEY56611.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1082
Score = 40.2 bits (92), Expect = 0.89, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 10/219 (4%)
Query: 340 FGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
E+ RL+E +R L + + E +I
Sbjct: 526 TVKFDDVGREVTRLQEEVRLLKAGSAAAPTSENERSMLHTLSTRLEEAMIQAKDVIT--Y 583
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAES--VASALQG 457
+ + + L + +G + S + E T+ L + QQ++ + +
Sbjct: 584 KDGVIQSLKERLQLASKRGA--DTIALLQQERSEFEREKTNLLAQLQQSKDSSASKKDEE 641
Query: 458 VNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVM 517
V+ + + + +++ A + RD + R +++V +
Sbjct: 642 VSRLQAENMALEQQKAALTVKVAQLTLELETARSQWTQDARDREHRAEKRCEKQVAQAEE 701
Query: 518 EEQH----LQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
+ + +QQQ+ Q ++ K A + + ++ E
Sbjct: 702 QLEQATTAMQQQMAQFRAELDMKVAKQRVAAQVACRAGE 740
>gi|51594767|ref|YP_068958.1| hypothetical protein YPTB0415 [Yersinia pseudotuberculosis IP
32953]
gi|51588049|emb|CAH19655.1| Small Conductance Mechanosensitive Ion Channel (MscS) Family
Protein [Yersinia pseudotuberculosis IP 32953]
Length = 1119
Score = 40.2 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 63/228 (27%), Gaps = 25/228 (10%)
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+ L P + L + + L Q + S S + ++ E
Sbjct: 100 AQEGDKPLPVPSNLSTSDLEQQVLQVSSQLLELNRLSQQEQDRAREISESLGQLPQQQSE 159
Query: 387 KGAFVGPLIGGLQSEFI-GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
+ + +QS+ + +++ L + + +S L L +
Sbjct: 160 ARRMLAEIGPRIQSQSNPSSPVAQAQLTLLQAEAVARKAKVNELELSQLSANNRQELSRL 219
Query: 446 Q------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN-----TPA 494
Q + V + LQ + + + + +
Sbjct: 220 QVELYKKREARVQAQLQSLRNNLNNQRQQAAEQAL------ERTELLAEQGGDLPESITQ 273
Query: 495 VLIRDTAEVEDIRQQRE-------VQRRVMEEQHLQQQLQQTSQDIGA 535
L R+ + + QQ + QR+ + + +Q T ++
Sbjct: 274 QLQRNRELSQALNQQVQRIDLISSQQRQAVAQTQQVRQALNTIREQAQ 321
>gi|172087805|ref|YP_206390.2| fused chromosome partitioning protein: nucleotide hydrolase [Vibrio
fischeri ES114]
gi|171902388|gb|AAW87502.2| fused chromosome partitioning protein: predicted nucleotide
hydrolase [Vibrio fischeri ES114]
Length = 1488
Score = 40.2 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 88/285 (30%), Gaps = 14/285 (4%)
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
+ N + AQ + P + + + + + L + G +S +
Sbjct: 165 FKAFNSVTDYHAQMFDYGVLPKKLRNTSDRSKFYRLIEASL-YGGISSAITRSLRDYLLP 223
Query: 342 NPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ ++ ++R + + ++ A + +
Sbjct: 224 QNGGVKKAFQDMEAALRENRMTLEAIKTTQSDRDLFKHLITESTNYVASDYMRHANDRRK 283
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ ++++++Q +L + N S L++ S Q ++ + LQ V T
Sbjct: 284 KVEQTLTHRVELMNAQRSLVDLSSVLNNMQSELELLTESESGLEQDYQAASDHLQLVQTA 343
Query: 462 ----------VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQRE 511
E + + M + + A + EV+ ++ Q
Sbjct: 344 VRQQEKIERYSEDLEELTERLEEQVMVVEEAAEQLAMA---EEQALLTEEEVDSLKTQLA 400
Query: 512 VQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
++ ++ Q + Q + KA + LT D + G
Sbjct: 401 DYQQALDMQQTRALQYQQAVKALEKAQQLTANESLTQDNAVDLQG 445
>gi|295103621|emb|CBL01165.1| Site-specific recombinases, DNA invertase Pin homologs
[Faecalibacterium prausnitzii SL3/3]
Length = 849
Score = 39.8 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 58/175 (33%), Gaps = 14/175 (8%)
Query: 386 EKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
EK P G + + I + + G + + K++ + K
Sbjct: 523 EKVEVHAPTGGR--TRYRQQRIDIYFNFI---GEYHPPAEEISEEERVRKIDEQAEAKKN 577
Query: 446 QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFS------LWATNT---PAVL 496
++ + + ++ + GDP + ++++R +
Sbjct: 578 EKRQKSVQRYRERQNELKAAAQAGDPEAIAKLESERERKRLQGAKRRAELKAIREADPEY 637
Query: 497 IRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMM 551
+R E E IR ++ + + + + + ++T +++ A A E D M
Sbjct: 638 LRTMEEKERIRLEKMQEAERRKAEKQKNKAKRTRKELKALAEAGDPEAIAERDAM 692
>gi|197336681|ref|YP_002158030.1| chromosome partition protein MukB [Vibrio fischeri MJ11]
gi|197313933|gb|ACH63382.1| chromosome partition protein MukB [Vibrio fischeri MJ11]
Length = 1490
Score = 39.8 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 33/278 (11%), Positives = 87/278 (31%), Gaps = 14/278 (5%)
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
+ N + AQ + P + + + + + L + G +S +
Sbjct: 167 FKAFNSVTDYHAQMFDYGVLPKKLRNTSDRSKFYRLIEASL-YGGISSAITRSLRDYLLP 225
Query: 342 NPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ ++ ++R + + ++ A + +
Sbjct: 226 QNGGVKKAFQDMEAALRENRMTLEAIKTTQSDRDLFKHLITESTNYVASDYMRHANDRRK 285
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ ++++++Q +L + N S L++ S Q ++ + LQ V T
Sbjct: 286 KVEQTLTHRVELMNAQRSLVDLSSVLNNMQSELELLTESESGLEQDYQAASDHLQLVQTA 345
Query: 462 ----------VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQRE 511
E + + M + + A + EV+ ++ Q
Sbjct: 346 VRQQEKIERYSEDLEELTERLEEQVMVVEEAAEQLAMA---EEQALLTEEEVDSLKTQLA 402
Query: 512 VQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHD 549
++ ++ Q + Q + KA + + LT D
Sbjct: 403 DYQQALDMQQTRALQYQQAVKALEKAQQLTVNESLTQD 440
>gi|221481559|gb|EEE19941.1| DEAD-box helicase family protein [Toxoplasma gondii GT1]
Length = 1158
Score = 39.8 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 21/190 (11%)
Query: 309 EAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQV 368
A+ + F L+ G + + + + L+ I F + +
Sbjct: 852 SAETQAFQLRRGAEIVIGTPGRVKDCLEKAYTVLNQCNYVVLDEADRMIDMGFEEIVNFI 911
Query: 369 LDDKAS---RSAAESMEKTREKGAFVGPLIGGLQ---SEFIGAMISREL-DILDSQGNLP 421
LD + +S E++ +E A G + L S + + R L +
Sbjct: 912 LDQIPTSNLKSNDEALILQQEMQAKAGHRLYRLTQMFSATMPPAVERLARKYLRQPSYIS 971
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+ +VE+ K Q+ + V + P M ++ +
Sbjct: 972 IGDPGAGKRAIEQRVEFVPEARKKQRLQDV------LENAT--------PPVMVFVNQKK 1017
Query: 482 VSRFSLWATN 491
+
Sbjct: 1018 SADALAKVLG 1027
>gi|237843843|ref|XP_002371219.1| DEAD-box ATP-dependent RNA helicase, putative [Toxoplasma gondii
ME49]
gi|211968883|gb|EEB04079.1| DEAD-box ATP-dependent RNA helicase, putative [Toxoplasma gondii
ME49]
Length = 1158
Score = 39.8 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 21/190 (11%)
Query: 309 EAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQV 368
A+ + F L+ G + + + + L+ I F + +
Sbjct: 852 SAETQAFQLRRGAEIVIGTPGRVKDCLEKAYTVLNQCNYVVLDEADRMIDMGFEEIVNFI 911
Query: 369 LDDKAS---RSAAESMEKTREKGAFVGPLIGGLQ---SEFIGAMISREL-DILDSQGNLP 421
LD + +S E++ +E A G + L S + + R L +
Sbjct: 912 LDQIPTSNLKSNDEALILQQEMQAKAGHRLYRLTQMFSATMPPAVERLARKYLRQPSYIS 971
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+ +VE+ K Q+ + V + P M ++ +
Sbjct: 972 IGDPGAGKRAIEQRVEFVPEARKKQRLQDV------LENAT--------PPVMVFVNQKK 1017
Query: 482 VSRFSLWATN 491
+
Sbjct: 1018 SADALAKVLG 1027
>gi|239927556|ref|ZP_04684509.1| hypothetical protein SghaA1_04984 [Streptomyces ghanaensis ATCC
14672]
gi|291435900|ref|ZP_06575290.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291338795|gb|EFE65751.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length = 1629
Score = 39.8 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 32/272 (11%), Positives = 68/272 (25%), Gaps = 19/272 (6%)
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
N Q G+ + A+ L + N R+
Sbjct: 376 TNATLQGGQAASQGAQKALQ-MAGAQQSLAAAHRNAARQIRQAEEGVADAVRNAAEASER 434
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
++K++ R L RSAAE + E A Q + A
Sbjct: 435 AAQQVKQAKR---GLADAVQQAADRQRSAAEQVRSAEESLADAQRTARQAQQDLTQARAD 491
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
+ D + L ++ V ++ +T + + + V +
Sbjct: 492 AARQLEDLESRLANASLSERDAVLAVQEAHT----RLIRMREAGESASYVE--QQRAQLA 545
Query: 469 GDPSCMDHMDTDRVSRFS------LWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHL 522
D + D ++ + R ++ Q +Q L
Sbjct: 546 YDQAVQRLADQRAETKRLSAEKKKADKAGVEGSDLVLD---AQERLRQAEQGVAKGQQQL 602
Query: 523 QQQLQQTSQDIGAKAAGRAMEKKLTHDMMENS 554
+ + ++ A ++ + N
Sbjct: 603 AKAREDAARQAVQSQRDIAEAQQRVAEAQRNV 634
>gi|152987165|ref|YP_001351358.1| methyl-accepting chemotaxis protein [Pseudomonas aeruginosa PA7]
gi|150962323|gb|ABR84348.1| methyl-accepting chemotaxis protein [Pseudomonas aeruginosa PA7]
Length = 708
Score = 39.8 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 82/283 (28%), Gaps = 19/283 (6%)
Query: 282 IRRLNETVNELAQFGRLSLHPPT------IAVSEAKQRNFDLKPGYMNIGALSREGRSLF 335
LN + +L+ + + ++Q L+ N
Sbjct: 257 QETLNGMSEAMQTALTDALNNIMAPAIQTLVSTTSQQSTQVLEKLVGNFMDGMTSVGREQ 316
Query: 336 QPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLI 395
+ ++ + E + LF L+++ R + +++ + +
Sbjct: 317 GLQMQQAAADVNAAVSGMSERLNQLF-----SSLNEQQGRQMEVAQQQSAAFETQLQRIS 371
Query: 396 GGLQSEFIGAMISRELDILDS--QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
G +E A + + L S L G +V + L + ++ A
Sbjct: 372 G--SAEERQAQMEQRFAELMSGLTNQLQTQLGTAQQRDEERQVLFERLLGQASSSQ-TAM 428
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQ 513
Q ++ E + H + ++V + NT + R+Q Q
Sbjct: 429 LEQFSSSTREQMQAMAEAGNERHSNLEKVFSRLMMNLNTQLD---SQMGAAEQREQARQQ 485
Query: 514 RRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
R + + Q+ + + + +L D + G
Sbjct: 486 RFQEQLDQVSTHQQELLSGLASAVQATQQQSRLMADQHQQLLG 528
>gi|221485690|gb|EEE23971.1| membrane attachment protein, putative [Toxoplasma gondii GT1]
Length = 4912
Score = 39.8 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 25/238 (10%), Positives = 66/238 (27%), Gaps = 20/238 (8%)
Query: 326 ALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTR 385
A + Q L +++ + L + + E +
Sbjct: 4469 AGIEQHAKSVQAQAQAWESEVAMVLAEMQDLVSELQAANRTNSPANVRH----EVVANLA 4524
Query: 386 EKGAFVGPLIGGLQSEF-IGAMISRELDILDSQGNLPECEGADNPPVS----LLKVEYTS 440
+ + G + R +L+ +L P + L+ + S
Sbjct: 4525 AVNSLLHNTESDQVETVDTGPELMRATTLLNRAQSLLRTAVDPGDPDTHENADLEAQAES 4584
Query: 441 PLFKYQQAESVASALQGVNTVVELG------VKTGDPSCMDHMDTDRVSRFSLWATNTPA 494
+ Q+ + + V G G P + + A
Sbjct: 4585 LSGRLQEHVDKHNLNRFEQFVSSTGSGLWSLENLGLPPM-----VEAALAALARTQSEAA 4639
Query: 495 VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
L+R+ + ++ + Q+ + + + L+ +T + +G + E + ++
Sbjct: 4640 DLMREWSRIQGLDQEAQADLQTRLRERLEAVSAETRKALGMLRSSLLSEVQRNDAKLQ 4697
>gi|313115193|ref|ZP_07800677.1| hypothetical protein HMPREF9436_02547 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622471|gb|EFQ05942.1| hypothetical protein HMPREF9436_02547 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 604
Score = 39.8 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 38/355 (10%), Positives = 93/355 (26%), Gaps = 21/355 (5%)
Query: 79 FSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFY 138
+ + + +A + V + ++ + + ++ GTG
Sbjct: 81 DNYPEPNVLPREADDEDTARALSSVLPVV-----LEQADYEQVYSDCWWRKLKQGTGVTG 135
Query: 139 MEADVDEKGLEEGIRYISVPLSNVYMSV---NHQNVVDSVYREFTFTVDQIVSKWGDKVL 195
+ D +G I SV L +Y + Q D T
Sbjct: 136 IFWDPAMRGGIGDIAVRSVNLLMLYWEPGVADIQASPDFFSLSLEDTARLCAQYPQLAGH 195
Query: 196 SSKMKSALARNENERFTIIHAVYPKSLTDKKKDK-GNKGFHSKFVS-------VDENRFF 247
++ + +E K+ D+ G H +
Sbjct: 196 TASVLDVPRYIHDEGQDTSSKSVVVDWYYKRPDETGRMVLHYCKFCNGVVLYASQNDPAL 255
Query: 248 EEKQIAT---FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPT 304
E + +P++ V D G +++ + + + LS
Sbjct: 256 AESGLYDHGQYPFVFDPLFVEEDSPAGFGYIDVMKDCQTAIDKMNHAMDENVLLSAKQRY 315
Query: 305 IAVSEAKQRNFDLKPGYMNIGALSRE-GRSLFQPVQFGNPLPYHEELNRLK-ESIRSLFL 362
+ A +L +I + F+P+Q + + E ++ +
Sbjct: 316 VLSDTAGVNEEELADFSRDIVHVVGRLNDDSFRPLQTAGLQGNSLSYRQSRIEELKEISG 375
Query: 363 LDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
+AA ++ +E G+ + + ++++
Sbjct: 376 NRDMTQGGTAGGVTAASAIAALQEAGSKLSRDMLKSAYRAFAKQCYLIIELMRQF 430
>gi|218288465|ref|ZP_03492755.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218241438|gb|EED08612.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 676
Score = 39.8 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 65/231 (28%), Gaps = 5/231 (2%)
Query: 311 KQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPY-HEELNRLKESIRSLFLLDLFQVL 369
L G G L + G+ L+ ++ + L FQ +
Sbjct: 159 FIDEIHLLVGAGASQGGLDAGNILKPALARGDIQVIGATTLDEYRQIEKDPALERRFQPV 218
Query: 370 DDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNP 429
+ + E I A ++ + + + +
Sbjct: 219 MVDEPSVEEAVQILEGLRPRYEAYHGVRYTDEAIRACVTLSHRYIGDRFLPDKAIDLMDE 278
Query: 430 PVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWA 489
S ++Y + E +A+ + + + + + ++ +++ A
Sbjct: 279 AGSKANLQYGG--DRASIEERLAAIAREKE--AAIRQEAYERAAELKVEEEKLRAELAHA 334
Query: 490 TNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
V + D ++ I + + + Q +L+ D+ A G+
Sbjct: 335 AGASDVPVVDEEQIAAIVEAKTGIPVTRMQADEQAKLKNLEADLAAVVIGQ 385
>gi|149728671|ref|XP_001498255.1| PREDICTED: laminin, beta 2 (laminin S) [Equus caballus]
Length = 1801
Score = 39.8 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 60/226 (26%), Gaps = 21/226 (9%)
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGA 405
+ +++ + + + ++ ++ RE V + E
Sbjct: 1477 LSQVAETRRQAGEAQQQAQAALDKANASRGQVEQANQELRELIQSVKDFLS---QEGADP 1533
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLF-----KYQQAESVASALQGVNT 460
+ + ++P + E L + V A Q +
Sbjct: 1534 DSIEMVATRVLELSIPASPEQIQHLAGAI-AERVRSLADVDTILARTVGDVRRAEQLLQD 1592
Query: 461 VVEL-----GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRR 515
G K + + + R A + DT + E Q + +
Sbjct: 1593 ARRARSRAEGEKQKAETVQAAL--EEAQRAQGAAQGAIQGAVVDTQDTEQTLHQVQERMA 1650
Query: 516 VMEEQ-----HLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
E+ QQL + + K AG ++ + ++ G
Sbjct: 1651 GAEQALSSAGERAQQLDGLLEALKLKRAGNSLAASSAEETAGSAQG 1696
>gi|221502938|gb|EEE28648.1| membrane attachment protein, putative [Toxoplasma gondii VEG]
Length = 4798
Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 25/238 (10%), Positives = 66/238 (27%), Gaps = 20/238 (8%)
Query: 326 ALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTR 385
A + Q L +++ + L + + E +
Sbjct: 4355 AGIEQHAKSVQAQAQAWESEVAMVLAEMQDLVSELQAANRTNSPANVRH----EVVANLA 4410
Query: 386 EKGAFVGPLIGGLQSEF-IGAMISRELDILDSQGNLPECEGADNPPVS----LLKVEYTS 440
+ + G + R +L+ +L P + L+ + S
Sbjct: 4411 AVNSLLHNTESDQVETVDTGPELMRATTLLNRAQSLLRTAVDPGDPDTHENADLEAQAES 4470
Query: 441 PLFKYQQAESVASALQGVNTVVELG------VKTGDPSCMDHMDTDRVSRFSLWATNTPA 494
+ Q+ + + V G G P + + A
Sbjct: 4471 LSGRLQEHVDKHNLNRFEQFVSSTGSGLWSLENLGLPPM-----VEAALAALARTQSEAA 4525
Query: 495 VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
L+R+ + ++ + Q+ + + + L+ +T + +G + E + ++
Sbjct: 4526 DLMREWSRIQGLDQEAQADLQTRLRERLEAVSAETRKALGMLRSSLLSEVQRNDAKLQ 4583
>gi|237842841|ref|XP_002370718.1| membrane attachment protein, putative [Toxoplasma gondii ME49]
gi|211968382|gb|EEB03578.1| membrane attachment protein, putative [Toxoplasma gondii ME49]
Length = 4900
Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 25/238 (10%), Positives = 66/238 (27%), Gaps = 20/238 (8%)
Query: 326 ALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTR 385
A + Q L +++ + L + + E +
Sbjct: 4457 AGIEQHAKSVQAQAQAWESEVAMVLAEMQDLVSELQAANRTNSPANVRH----EVVANLA 4512
Query: 386 EKGAFVGPLIGGLQSEF-IGAMISRELDILDSQGNLPECEGADNPPVS----LLKVEYTS 440
+ + G + R +L+ +L P + L+ + S
Sbjct: 4513 AVNSLLHNTESDQVETVDTGPELMRATTLLNRAQSLLRTAVDPGDPDTQENADLEAQAES 4572
Query: 441 PLFKYQQAESVASALQGVNTVVELG------VKTGDPSCMDHMDTDRVSRFSLWATNTPA 494
+ Q+ + + V G G P + + A
Sbjct: 4573 LSGRLQEHMDKHNLNRFEQFVSSTGSGLWSLENLGLPPM-----VEAALAALARTQSEAA 4627
Query: 495 VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
L+R+ + ++ + Q+ + + + L+ +T + +G + E + ++
Sbjct: 4628 DLMREWSRIQGLDQEAQADLQTRLRERLEAVSAETRKALGMLQSSLLSEVQRNDAKLQ 4685
>gi|332286581|ref|YP_004418492.1| metallopeptidase [Pusillimonas sp. T7-7]
gi|330430534|gb|AEC21868.1| metallopeptidase [Pusillimonas sp. T7-7]
Length = 475
Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 25/222 (11%), Positives = 66/222 (29%), Gaps = 25/222 (11%)
Query: 337 PVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREK---GAFVGP 393
P E+ L+ I L D + +A++ +
Sbjct: 21 PTLTQKQADAREQRAELRARI--AGLQDEIDRSESSRRDAASQLKASETAISASNRRLAE 78
Query: 394 LIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
L + E + E I++ + L + + SP ++ +
Sbjct: 79 LAER-RHEAERELKDIERQIVEQKQQLQARQHELGEQMRAQYAGGLSPWAALLSGDNPQA 137
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQRE-- 511
+ ++ + + D ++ DR++R R + ++ Q +
Sbjct: 138 IGRDLSYLGYITQAQADAVIAVNLALDRLARLQA----------RSEEQTRELAQLAQDT 187
Query: 512 -------VQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKL 546
++ +Q L++ + G A+ + +++L
Sbjct: 188 TEEKNKLEAQKAERQQVLKRIEAELQAQRGQAASLKQNDERL 229
>gi|307943499|ref|ZP_07658843.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773129|gb|EFO32346.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 859
Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 25/268 (9%), Positives = 78/268 (29%), Gaps = 21/268 (7%)
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLF-----QPVQF 340
E + + K+ ++P N ++S++ S + +
Sbjct: 545 EEIARLTQELREALNEYMQALAEQMKRNPQAMQPFNSNQQSMSQQDLSEMLDRIEELART 604
Query: 341 GNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS 400
G+ E L ++++ + +L + D E + + E L+
Sbjct: 605 GSRDAARELLAQMQQMLENLQAGRPQMMPPDGMDGEMMEMLNELSEMIQKQQQLMDQTHQ 664
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
+ S + + + + Q + + QG
Sbjct: 665 ----------FNQQQSPNGQQQQGQNRPGQQGQQQPGQGNQMTAEQLQQMLDQLRQGQGN 714
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ + + D + + ++ + + + D + ++ + ++ +
Sbjct: 715 LAQQLQELMDQLGQNGVGENQALGEAGKSMG------DAQQSLGDGQGEQALGQQGQALE 768
Query: 521 HLQQQLQQTSQDIGAKAAGRAMEKKLTH 548
L+Q Q ++ + + G M + +
Sbjct: 769 SLRQGAQGLAEQMMGQGNGPGMAQGPSP 796
>gi|325277058|ref|ZP_08142716.1| hypothetical protein G1E_25906 [Pseudomonas sp. TJI-51]
gi|324097808|gb|EGB95996.1| hypothetical protein G1E_25906 [Pseudomonas sp. TJI-51]
Length = 328
Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 34/133 (25%), Gaps = 11/133 (8%)
Query: 414 LDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSC 473
L G + + S + + + Q +
Sbjct: 172 LQQSGKAELNPSNLEQQADQAQAQGESA-GRIAAEDPTQAVDQLKQWFDRVRKA--GEPA 228
Query: 474 MDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ--QREVQRRVMEEQHLQQQLQQTSQ 531
+ D + T + E + I R Q+ + Q L+ Q +Q ++
Sbjct: 229 LSAADKQALVNIVAARTG------KSQQEAQQIVDNYARAYQQAAEQVQVLKDQAEQQAR 282
Query: 532 DIGAKAAGRAMEK 544
+ AA +
Sbjct: 283 EAAQVAASNVSKA 295
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 8/109 (7%)
Query: 442 LFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTA 501
L + QQ + + Q + + +G + D R + R+
Sbjct: 333 LRQLQQVKKMGPLTQLLEMIPGMGQLLRQQQVQ--ISDDEYKRIEAIILSMTPEERRNPD 390
Query: 502 EVEDIRQQREVQ------RRVMEEQHLQQQLQQTSQDIGAKAAGRAMEK 544
+ R++R Q V + +Q+Q+ ++G AAGR+
Sbjct: 391 IINYSRRRRIAQGSGTTIAEVSQLLTQFKQMQRMMAELGQLAAGRSRGP 439
>gi|120611311|ref|YP_970989.1| methyl-accepting chemotaxis sensory transducer [Acidovorax citrulli
AAC00-1]
gi|120589775|gb|ABM33215.1| methyl-accepting chemotaxis sensory transducer [Acidovorax citrulli
AAC00-1]
Length = 541
Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 61/239 (25%), Gaps = 33/239 (13%)
Query: 325 GALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT 384
A S Q G + +L ++R + +R AA+ T
Sbjct: 288 IAAGNNDLSARTEQQAGALQQTAASMEQLTSTVRQ----------NADNARHAAQLAGST 337
Query: 385 REKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFK 444
E G ++G + S DS + + G + + + +
Sbjct: 338 SEVAQRGGAMVGQMVSTMGAVT--------DSSRRIVDIIGVIDGIAFQTNILALNAAVE 389
Query: 445 YQQAES-----------VASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTP 493
+A V S Q + + + D S ++ R+ +
Sbjct: 390 AARAGEQGRGFAVVANEVRSLAQRSASAAKEIKQLIDTSVQQVGESSRLVNQAGTTMG-- 447
Query: 494 AVLIRDTAEVEDIRQQREVQRRVMEEQ-HLQQQLQQTSQDIGAKAAGRAMEKKLTHDMM 551
++ +V + Q+ + Q + A E +
Sbjct: 448 -EVVDSVQQVARLIQEIASANQEQAAGIDQVNQAVTHMDQATQQNAALVEEATAAAQSL 505
>gi|218189914|gb|EEC72341.1| hypothetical protein OsI_05562 [Oryza sativa Indica Group]
Length = 2184
Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 23/193 (11%), Positives = 54/193 (27%), Gaps = 20/193 (10%)
Query: 354 KESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL-- 411
++ + + D A+ +A + E + + QSE + +
Sbjct: 128 QQQQAKMNMAGPSTRDQDVAANTA-KMQELMSLQAQAQAQMFKRQQSEHLQQAEKQAEQG 186
Query: 412 ---DILDSQGNL--PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ G++ P P L P+ Q +++A + +
Sbjct: 187 QPSNSEQRSGDMRPPSMPPQGVPGQQLSSAGMVRPMQPMQGQAGMSNAG---ANPMAMAQ 243
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
+ + D + PA + + + ++ R + E + Q
Sbjct: 244 LQAIQAWAKEHNVD---------LSNPANVTLISQILPMLQSNRMAAMQKQNEVGMASQQ 294
Query: 527 QQTSQDIGAKAAG 539
Q + A G
Sbjct: 295 QSVPSQMNNDAPG 307
>gi|311276733|ref|XP_003135336.1| PREDICTED: nik-related protein kinase-like [Sus scrofa]
Length = 1353
Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 31/223 (13%)
Query: 333 SLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVG 392
QP + + + + +F+ Q + + A++ ++ +
Sbjct: 388 EPSQPRWLPDREEPQVKALQHLQGAARVFMPLQAQDSAPRPLQGQAQAHQRLQGAARVFM 447
Query: 393 PLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVA 452
PL ++++ L Q P + L+ + +P + + +A
Sbjct: 448 PLQAQVKAKASRP--------LQMQMKAPPRPRRTAWMLMPLQAQVKAP----RPLQVLA 495
Query: 453 SALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV--EDIRQQR 510
+ + G P R +V + RQ R
Sbjct: 496 QIPREQQAQTQPQASEGPQDLDQ----------------VPEE-FRGHDQVPEQQQRQGR 538
Query: 511 EVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMEN 553
+++ + Q +QQL+Q + +A E E
Sbjct: 539 VPEQQQRQNQVPEQQLEQNGIPEQPEVQEQAAEPTQAETEAEE 581
>gi|41052581|dbj|BAD07923.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa
Japonica Group]
gi|41052776|dbj|BAD07645.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa
Japonica Group]
gi|222622037|gb|EEE56169.1| hypothetical protein OsJ_05089 [Oryza sativa Japonica Group]
Length = 2200
Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 23/193 (11%), Positives = 54/193 (27%), Gaps = 20/193 (10%)
Query: 354 KESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL-- 411
++ + + D A+ +A + E + + QSE + +
Sbjct: 128 QQQQAKMNMAGPSTRDQDVAANTA-KMQELMSLQAQAQAQMFKRQQSEHLQQAEKQAEQG 186
Query: 412 ---DILDSQGNL--PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ G++ P P L P+ Q +++A + +
Sbjct: 187 QPSNSEQRSGDMRPPSMPPQGVPGQQLSSAGMVRPMQPMQGQAGMSNAG---ANPMAMAQ 243
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
+ + D + PA + + + ++ R + E + Q
Sbjct: 244 LQAIQAWAKEHNVD---------LSNPANVTLISQILPMLQSNRMAAMQKQNEVGMASQQ 294
Query: 527 QQTSQDIGAKAAG 539
Q + A G
Sbjct: 295 QSVPSQMNNDAPG 307
>gi|168051357|ref|XP_001778121.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670443|gb|EDQ57011.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 27/95 (28%), Gaps = 13/95 (13%)
Query: 461 VVELGVKTGDPS---CMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVM 517
++GV+ +P M+T + ++ + Q
Sbjct: 742 AQQMGVQQMNPQQLNAAQQMNTQQQLN--AQQMGV--------QQMNPQQLNAAQQMNTQ 791
Query: 518 EEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
++ QQ Q AA + +++ M
Sbjct: 792 QQLSAQQMGMQQMNPQQLNAAQQMSTQQMNPQQMS 826
>gi|291232347|ref|XP_002736118.1| PREDICTED: myeloid/lymphoid or mixed-lineage leukemia 4-like,
partial [Saccoglossus kowalevskii]
Length = 3264
Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 66/261 (25%), Gaps = 40/261 (15%)
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
+ S + G P+ + N++ + L + +A + +
Sbjct: 24 MRSPIPSPAPLLSTGPMAPHMQVPNQMSGQL-----LPGMMPVRGQAPGYSGIPGIMLGQ 78
Query: 387 KGAFVGPLIGGLQ-----SEFIGAMISRELDILDSQ-GNLPECEGADNPPVSLLKVEY-- 438
+ G +Q ++ + L + G + G P ++V
Sbjct: 79 GLPHMQGPPGQMQGPPVTTQGQLGQMQGPLGQMQGPPGQMQGPPGQMQGPPGQMQVPPGQ 138
Query: 439 -TSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD-------------HMDTDRVSR 484
P + Q V + Q G G P M + ++
Sbjct: 139 MQGPPGQMQGPP-VTTQGQLGQMQGPPGQMQGPPGQMQGPPGQMQGPPGQMQVPPGQMQV 197
Query: 485 FSLWATNTPAVLIRDTAEVEDIRQQREVQRRVME----EQH---LQQQLQQTSQDI---- 533
P +++ Q + M+ + H Q Q + +
Sbjct: 198 PPGQMQGLPVTTQVPPGQMQGPPGQMQGPPGQMQGPPGQMHGPPGQMQGPHGAMQMFEAL 257
Query: 534 -GAKAAGRAMEKKLTHDMMEN 553
G ++T D M
Sbjct: 258 PGQMLHSPRGPGEVTMDRMSM 278
>gi|40556094|ref|NP_955179.1| CNPV156 hypothetical protein [Canarypox virus]
gi|40233919|gb|AAR83502.1| CNPV156 hypothetical protein [Canarypox virus]
Length = 832
Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats.
Identities = 25/222 (11%), Positives = 76/222 (34%), Gaps = 11/222 (4%)
Query: 336 QPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLI 395
+ ++ E+ + E+ + ++ ++ + E E+ K + ++
Sbjct: 465 KTLEIAMQKIVEIEVQEIIENAIRESEMQESEMKENAER-AMQEIAER-EMKEIAMQEIV 522
Query: 396 GGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY------QQAE 449
E I + + + E + ++E + + +
Sbjct: 523 ER---EMQEIAIQEIAERAMQEIAIQEIAERAMQESVMQEIEMQEITERTIQEITERAMQ 579
Query: 450 SVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQ 509
+A + E + S M ++ ++ ++ + + +++ A E Q+
Sbjct: 580 EIAIQESAKRAMQESAERAMQESVMQEIEMQEIAERAMQESVMQEIEMQERAMQERAMQE 639
Query: 510 REVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMM 551
R +Q R M+E +Q++ Q + R M+++ ++
Sbjct: 640 RAMQERAMQEIEMQERAMQERAMQEIEMQEREMQERAMQEIE 681
>gi|196229374|ref|ZP_03128239.1| hypothetical protein CfE428DRAFT_1404 [Chthoniobacter flavus
Ellin428]
gi|196226606|gb|EDY21111.1| hypothetical protein CfE428DRAFT_1404 [Chthoniobacter flavus
Ellin428]
Length = 514
Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 15/142 (10%), Positives = 47/142 (33%), Gaps = 5/142 (3%)
Query: 416 SQGNLPECEGADNPPVSLLKVEYTSPLFKYQ-QAESVASALQGVNTVVELGVKTGDPS-- 472
L + L+ T+P + + +++ Q V + +
Sbjct: 180 KADALKKLAEQLQKGAEQLRANATNPEEAGKSKLRELSALEQMVQDMQKSPAGLTPEEQQ 239
Query: 473 -CMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQ 531
++ + ++ + + + E+E Q+ Q+ + +++QL+ +
Sbjct: 240 ALAKALEQNEATKEAAKSLAA-GDQAKAAEELEKEMQKLAEQKDGATSEEIRKQLEDAVK 298
Query: 532 DIGAKAAGRAMEKKLTHDMMEN 553
+ + +KL + E+
Sbjct: 299 QLAQQKQLSEAMQKLAQQLKES 320
>gi|320589539|gb|EFX02000.1| myosin class 2 heavy chain [Grosmannia clavigera kw1407]
Length = 2564
Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 62/208 (29%), Gaps = 28/208 (13%)
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESME-KTREKGAFVGPLIGGLQSEFIGA 405
++ +++ + + + SAAE +E + E + L+SE +
Sbjct: 1657 QIVEEAVERQLQTTAEAVPARRQEAEEGGSAAEMLEARVMELELRLQAERANLESELLLR 1716
Query: 406 MI-SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
+ + + + ++VE + Q+ + L+ E
Sbjct: 1717 RTAEDKTAEMGRK---------LELAETKIEVEIMNRSAYDQRVADLEDRLRHQEEKTEA 1767
Query: 465 GVKTGDPSCMDHMDTDRVSR-FSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQ 523
MD R + L T E +R++ E + + ++
Sbjct: 1768 -----------EMDVRRSAEGRLSEVQG---QLRISTEERTRLREELEERGQQLKAAEET 1813
Query: 524 QQLQQTSQDIGAKAAGRAMEKKLTHDMM 551
T + A +A E+ D+
Sbjct: 1814 --TGTTLMRLAVLEAAQAREETAHSDLQ 1839
>gi|238018524|ref|ZP_04598950.1| hypothetical protein VEIDISOL_00351 [Veillonella dispar ATCC 17748]
gi|237864995|gb|EEP66285.1| hypothetical protein VEIDISOL_00351 [Veillonella dispar ATCC 17748]
Length = 1214
Score = 38.3 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 37/107 (34%), Gaps = 2/107 (1%)
Query: 443 FKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
+ Q+ ++ + Q + + + + ++ + + AE
Sbjct: 467 AEAQRQAAIQAEQQRLAAQQAEQARIAEAQRQAALKAEQ--DRIAAQQAEQQRIAAEQAE 524
Query: 503 VEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHD 549
+ + Q+R+ EQ Q+ + AA +A ++++ +
Sbjct: 525 AQRQAALQAEQQRIAAEQAEAQRQAALKAEQERIAAEQAEQQRIAAE 571
>gi|89052971|ref|YP_508422.1| hypothetical protein Jann_0480 [Jannaschia sp. CCS1]
gi|88862520|gb|ABD53397.1| hypothetical protein Jann_0480 [Jannaschia sp. CCS1]
Length = 850
Score = 38.3 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 81/276 (29%), Gaps = 14/276 (5%)
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
E + ++ + + + + M+ L R + + +Q G
Sbjct: 530 QEMREAMDEYMQELADNTEFGDD--TDQPDEGERQEMSNADLDEMLRRIEELMQEGRMAE 587
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGA 405
E L L+E + ++ + D E+ME +E L E
Sbjct: 588 AMEMLQALQEMLENMEITQGEGG-GDGPQTPGQEAMEGLQETLRGQQELSDDSFQELQDQ 646
Query: 406 M-ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT---- 460
+R + QGN P+ + + + AE L+ +
Sbjct: 647 FNPNRPGQQSEQQGNAPQGNQPGQEGQNPGDIAG-GDSGQGSLAERQQELLRQLEEQARR 705
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWAT---NTPAVLIRDTAEVEDIRQQREVQRRVM 517
+ G + GD + R + A L + +E +R+ +
Sbjct: 706 LPGTGTEAGDEALEQLDGAGRAMDEAAEALERGGIAEALDLQSEAMEALREGMTQLSEAL 765
Query: 518 EEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMEN 553
++ + Q ++ G A R M+ L N
Sbjct: 766 AQEQGAEPGQGPAE--GNMAESRPMQDPLGRQAGNN 799
>gi|326317367|ref|YP_004235039.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374203|gb|ADX46472.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Acidovorax avenae subsp. avenae ATCC 19860]
Length = 541
Score = 38.3 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 61/239 (25%), Gaps = 33/239 (13%)
Query: 325 GALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT 384
A S Q G + +L ++R + +R AA+ T
Sbjct: 288 IAAGNNDLSARTEQQAGALQQTAASMEQLASTVRH----------NADNARHAAQLAGST 337
Query: 385 REKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFK 444
E G ++G + S DS + + G + + + +
Sbjct: 338 SEVAQRGGAMVGQMVSTMGAVT--------DSSRRIVDIIGVIDGIAFQTNILALNAAVE 389
Query: 445 YQQAES-----------VASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTP 493
+A V S Q + + + D S ++ R+ +
Sbjct: 390 AARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIDTSVQQVGESSRLVNQAGTTMG-- 447
Query: 494 AVLIRDTAEVEDIRQQREVQRRVMEEQ-HLQQQLQQTSQDIGAKAAGRAMEKKLTHDMM 551
++ +V + Q+ + Q + A + +
Sbjct: 448 -EVVESVQQVARLIQEIASANQEQAAGIDQVNQAVTHMDQATQQNAALVEQATAAAQSL 505
>gi|301780748|ref|XP_002925791.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5-like
[Ailuropoda melanoleuca]
Length = 3514
Score = 38.3 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 81/315 (25%), Gaps = 41/315 (13%)
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R L E L + L P L EG
Sbjct: 2166 RTLAEVERLLGEMRARDLGAPRAVAEAELDAARRLLARVQEQLTSRWEGNQGLAARARDR 2225
Query: 343 PLPYHEELNRLKESIRSL-FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ L L+ ++ + L+ + +++ + +E L LQ+
Sbjct: 2226 LAQHEAGLMDLRGALNRAVGTTREAEELNSRNQERLEDALHRKQELSRDNATLRATLQAA 2285
Query: 402 F-IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQA-ESVASALQGVN 459
A +S L +D + S V + Q+A E+ + +
Sbjct: 2286 SDTLAQLSGLLPAMDQAREVSAAPPRGTEAGSDGIVRGVNQDHFIQRAIEAANAYSSILQ 2345
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRF--------SLWATNTPAVLIRDTAEV-------- 503
V G ++ V R L T+ ++ +
Sbjct: 2346 AVQAAEGAAGQARQQENDTWAMVVRRGLAPRAWELLTNTSALLEVVLREQQRLGHVRVTL 2405
Query: 504 ---------EDIRQQREVQRRVMEEQHLQQQLQQTSQDI-------------GAKAAGRA 541
R++++ R + L +TS+ I A+ R
Sbjct: 2406 QGTGTQLRDAQARKEQQATRIQEVQAMLAMDTDETSKKIARAKAVAAEAQDTAARVQSRI 2465
Query: 542 MEKKLTHDMMENSYG 556
+ + + + YG
Sbjct: 2466 QDMQKHLERWQGQYG 2480
>gi|295103136|emb|CBL00680.1| hypothetical protein [Faecalibacterium prausnitzii SL3/3]
Length = 594
Score = 38.3 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 32/302 (10%), Positives = 78/302 (25%), Gaps = 18/302 (5%)
Query: 133 GTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS---VNHQNVVDSVYREFTFTVDQIVSK 189
GTG + D G I SV L +Y + Q+ D + T
Sbjct: 130 GTGVTGIFWDPAAHGGLGDIAVRSVNLLMLYWEPGVQDIQDSPDLFHLSLEDTARLTAQ- 188
Query: 190 WGDKVLSSKMKSALARNENER---------FTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
+ + + R +E + P + +
Sbjct: 189 YPQLTGHAAGVVDVPRYIHEDGQTTANKSVVVDWYYKRPDENGKLRLHYCKLCNGVVLYA 248
Query: 241 VDENRFFEEKQIAT---FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
+ + + +P++ V D G +++ + + +
Sbjct: 249 SQNDPALAARGLYDHGKYPFVFDPLFVEEDSPAGFGYIDVMKDCQNAIDKMNHAMDENVL 308
Query: 298 LSLHPPTIAVSEAKQRNFDLKPGYMNIGALSRE-GRSLFQPVQFGNPLPYHEELNRLK-E 355
L+ + A +L +I + F+P+Q + E
Sbjct: 309 LASRQRYVLSDTAGVNEEELADLSRDIVHVVGRLNEDSFRPLQTAGLQGNSLSYRNSRIE 368
Query: 356 SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILD 415
++ + +AA ++ +E G+ + + ++++
Sbjct: 369 ELKEISGNRDLTQGGTTGGVTAASAIAALQEAGSKLSRDMLKSAYRAFARQCYLIIELMR 428
Query: 416 SQ 417
Sbjct: 429 QF 430
>gi|195035865|ref|XP_001989392.1| GH11701 [Drosophila grimshawi]
gi|193905392|gb|EDW04259.1| GH11701 [Drosophila grimshawi]
Length = 1857
Score = 37.9 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 7/199 (3%)
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
+++E + L L + S + E + + + + Q E + E
Sbjct: 747 EQIRELNQQLDELTTQLNVQKADSSALDEMLNAQQSQNVDSKTQLEQFQVELQQLKTANE 806
Query: 411 LDILDSQGNLPECEGADNPPVSLLK----VEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ + + E + S Q +E+ + + + + + G
Sbjct: 807 TVLKEKAAMEQQMEQELGKLRQQTQELLLASGDSKSQNLQLSEAKVALEKQLEALQQSGE 866
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
S + ++ ++ R + L + + + +Q ++ +++ +QQ
Sbjct: 867 AQLQASQAEIVNKEQQLRELEKS---KEQLQQQLEQQTKLHEQLIASQQELQQSQTKQQA 923
Query: 527 QQTSQDIGAKAAGRAMEKK 545
+Q++Q + ME K
Sbjct: 924 EQSAQLAQETSKVVEMEAK 942
>gi|258649127|ref|ZP_05736596.1| peptidyl-prolyl cis-trans isomerase [Prevotella tannerae ATCC
51259]
gi|260850781|gb|EEX70650.1| peptidyl-prolyl cis-trans isomerase [Prevotella tannerae ATCC
51259]
Length = 739
Score = 37.9 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 14/146 (9%), Positives = 37/146 (25%), Gaps = 25/146 (17%)
Query: 425 GADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSC-MDHMDTDRVS 483
+VE S + K Q+ + S + + + D ++T
Sbjct: 51 ETLTIQDFQNRVEQLSNIAKMQKQRAGQS-----DALTDQEQDQIREQVWSDFVNTS-AI 104
Query: 484 RFSLWATNTPAVLIRDTAEVE-DIRQQREVQRRVMEEQHLQQQLQQT------------- 529
+ +V+ +R + ++M + Q
Sbjct: 105 KHETDKAGIQV----TDEDVQDALRTGQAQSLQMMAQMGFANQQTGRFDVNALQDFLKNY 160
Query: 530 SQDIGAKAAGRAMEKKLTHDMMENSY 555
+++ A + M+ +
Sbjct: 161 DKNMAQLAQSGQQAYMEQYQMLRQIW 186
>gi|163815658|ref|ZP_02207030.1| hypothetical protein COPEUT_01838 [Coprococcus eutactus ATCC 27759]
gi|158448963|gb|EDP25958.1| hypothetical protein COPEUT_01838 [Coprococcus eutactus ATCC 27759]
Length = 438
Score = 37.9 bits (86), Expect = 4.5, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 63/223 (28%), Gaps = 26/223 (11%)
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
+ ++ + L LD +A+ + + ++K +E LQ+E
Sbjct: 59 AEAKANAEKYQKKVDK--LTATVNELDKQATDISTQIVQKKQEADD--------LQTEID 108
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVE 463
+ + VEY L E + + V+ +
Sbjct: 109 ETQTKLAEAQVSEDNQYVAMKKRIQYLYEEGDVEYIDALMSSASFEDSLNKSEYVDQLSS 168
Query: 464 LGVKTGDPSCMDHMDTDR----VSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRR---- 515
K D D + A L + ++++ + Q+ +
Sbjct: 169 YDQKQLDKLVKTKNDIAEYEQTLKDDLADVKKVQADLEQKQSDLDAVISQKNEEINKYSG 228
Query: 516 -VMEEQHLQQQLQ-------QTSQDIGAKAAGRAMEKKLTHDM 550
+Q L ++ +I + A R E++ ++
Sbjct: 229 DAAMQQALAEEYARQESELDDKLAEIARQEAARLEEERKQEEL 271
>gi|221271428|dbj|BAH15181.1| portal protein [Serratia phage KSP100]
Length = 374
Score = 37.9 bits (86), Expect = 4.6, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 64/250 (25%), Gaps = 16/250 (6%)
Query: 315 FDLKPGYMNI-GALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKA 373
D +PG + A+ P+ G + + + K
Sbjct: 29 LDNRPGGVVEENAIGMVDLFPHHPLPAGVDSILEQIEQAKERRTGVTRIGMGLSPEVFKN 88
Query: 374 SRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSL 433
S A + + + F+ + +L N + +
Sbjct: 89 DNSFATVDMMMSAAQNRMRMVARNVAQNFMTQLFLAIYRLLKENENSTLPIEVNGAMKEV 148
Query: 434 L--------KVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRF 485
+ KV + + ++ E + +Q + + + + ++R
Sbjct: 149 MPALWPDRDKVIVAVAIGQNERRERANNLVQLSQFLT--ANPLLSGTTFTAENANHLARE 206
Query: 486 SLWATNT--PAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIG---AKAAGR 540
A I +V+ E Q + Q++Q + I A GR
Sbjct: 207 LTLAMGFYDVNNFITPMEQVQPQGPTPEQQAEQQRIELESQRVQLELKKIENDMQVAMGR 266
Query: 541 AMEKKLTHDM 550
++
Sbjct: 267 MQAEQTEAQA 276
>gi|75761880|ref|ZP_00741807.1| Phage protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228905318|ref|ZP_04069295.1| hypothetical protein bthur0014_63940 [Bacillus thuringiensis IBL
4222]
gi|228937950|ref|ZP_04100577.1| hypothetical protein bthur0008_6260 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970830|ref|ZP_04131470.1| hypothetical protein bthur0003_6170 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977404|ref|ZP_04137799.1| hypothetical protein bthur0002_6190 [Bacillus thuringiensis Bt407]
gi|74490640|gb|EAO53929.1| Phage protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228782381|gb|EEM30564.1| hypothetical protein bthur0002_6190 [Bacillus thuringiensis Bt407]
gi|228788955|gb|EEM36894.1| hypothetical protein bthur0003_6170 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821741|gb|EEM67742.1| hypothetical protein bthur0008_6260 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228854317|gb|EEM98998.1| hypothetical protein bthur0014_63940 [Bacillus thuringiensis IBL
4222]
gi|326938429|gb|AEA14325.1| Phage protein [Bacillus thuringiensis serovar chinensis CT-43]
Length = 707
Score = 37.9 bits (86), Expect = 4.6, Method: Composition-based stats.
Identities = 39/318 (12%), Positives = 75/318 (23%), Gaps = 15/318 (4%)
Query: 133 GTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH--QNVVDSVYREFTFTVDQIVSKW 190
G G E D ++ IR VY+ + + +D I ++
Sbjct: 162 GEGEVGFEED-MQRLYTGEIRCRICDPLTVYIDPAAEMDEEIRWIVERKPRDIDYIKERY 220
Query: 191 GDKVLSSK---MKSALARNENERFTIIHAVYPK---SLTDKKKDKGNKGFHSKFVSVDEN 244
G V + + +A F P K G K
Sbjct: 221 GKDVAADENVGFAAAFDVTPQNGFNSTSKKRPNMAMVDEMWVKPCGKHPNGLKVTIAGGQ 280
Query: 245 RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPT 304
++ P+ + + + + LP R +N + A R +
Sbjct: 281 LLDIDENAGDIPFFIFGDIPIPGSVKAEAFIKDMLPIQREINIMRSMFATHARKMGNSMW 340
Query: 305 IAVSEAKQ--RNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFL 362
+ + + G + R + P Y LN I L
Sbjct: 341 LVPMGSSVDEDEITNEEGGIVHYTPIEGVRPE-RVGAPDIPSFYDRILNNHDADIDDLSG 399
Query: 363 LDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPE 422
+ + E+ + + ++ R L ++
Sbjct: 400 AREISQGRLPSGLDTYSGLSLMVEQENEKLAVSSQNYEHGMKRLLQRVLLLMKKHYTEER 459
Query: 423 CEGADNPPVSLLKVEYTS 440
P +E S
Sbjct: 460 MARILGPDN---DIELVS 474
>gi|195448509|ref|XP_002071689.1| GK10116 [Drosophila willistoni]
gi|194167774|gb|EDW82675.1| GK10116 [Drosophila willistoni]
Length = 1733
Score = 37.9 bits (86), Expect = 4.8, Method: Composition-based stats.
Identities = 22/261 (8%), Positives = 59/261 (22%), Gaps = 53/261 (20%)
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNR 352
Q + P + + + N +
Sbjct: 558 EQARQQMAQNPMMMQQRQMSEDLARQQAAQNP----------------MMMQQRQMAEEQ 601
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
++ + ++ + + + +R M + R+ + E
Sbjct: 602 ARQQMSQNPMMMQQRQMAEDLARQQVAQMMQQRQMAEEQARQHMAQNPMMMQQRQMAEEQ 661
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
P + + Q AE +P
Sbjct: 662 ARQQAAQNPMM------------------MQQRQMAED-----------QARQQMAQNPM 692
Query: 473 CMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQD 532
M +++ ++ ++ + E R+ M + + Q +Q ++D
Sbjct: 693 MMQ---QRQMAEDLARQQAAQNPMM-----MQQRQMAEEQARQQMAQNPMMMQQRQMAED 744
Query: 533 IGAKAAGRAMEKKLTHDMMEN 553
+ + A + M E
Sbjct: 745 LARQQAEQNPMMMQQRQMAEE 765
>gi|320352670|ref|YP_004194009.1| type 11 methyltransferase [Desulfobulbus propionicus DSM 2032]
gi|320121172|gb|ADW16718.1| Methyltransferase type 11 [Desulfobulbus propionicus DSM 2032]
Length = 586
Score = 37.9 bits (86), Expect = 5.0, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 63/250 (25%), Gaps = 12/250 (4%)
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPY 346
TV ++ + V++ P + G + +Q
Sbjct: 196 LTVMDVLEGVSPDYAVIAQRVADPFIMQTTAAPFAKDYGIDLKNIAGRYQQYLTARIGMA 255
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
++ + V + + AE+ + E+ A + +
Sbjct: 256 ETTAQTAEQRAQRA----ETAVQNAEQRVQQAETAAQNAEQRAQRAETAVQNAEQRVQRA 311
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAE-SVASALQGVNTVVELG 465
+ V + S + Q+AE +V +A Q V
Sbjct: 312 ETAAQSAEQRAQRAETAVQNAEQRVQQAETAAQSAEQRAQRAETAVQNAEQRVQRAETAA 371
Query: 466 V-----KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ + + ++ + + A ++ +QR Q +
Sbjct: 372 QSAEQRAQRAETAVQ--NAEQRVQQAEIAVQNAEQRVQRAETAAQSAEQRVQQAETAVQN 429
Query: 521 HLQQQLQQTS 530
Q+ Q +
Sbjct: 430 AEQRVQQAIA 439
>gi|312131267|ref|YP_003998607.1| hypothetical protein Lbys_2592 [Leadbetterella byssophila DSM
17132]
gi|311907813|gb|ADQ18254.1| hypothetical protein Lbys_2592 [Leadbetterella byssophila DSM
17132]
Length = 1080
Score = 37.9 bits (86), Expect = 5.2, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 72/217 (33%), Gaps = 18/217 (8%)
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGA 405
++E+ LK ++ L + + + + +K + L+ S+ +
Sbjct: 555 LNKEIQDLKNQLQELLEK------QSRFEQQSPQLQQKMEMIQKMLNELMESKDSKVLEE 608
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
+ LD + + N L E L +Q+ + + N + EL
Sbjct: 609 LKKMMEKSLDEKSL--DQLEKFNKNQRNLDKELDRTLKLFQELQRKQKIEETSNELKELA 666
Query: 466 VKT-------GDPSCMDHMD--TDRVSRFSLWATNTPAVLIRDTAEVEDIRQQ-REVQRR 515
+ +P + ++ + + + N L + ++D + + E Q++
Sbjct: 667 EEQEKLSEADANPQDQEKINQKFEDIKKKLEDIENRSNELNKSFDPMDDKQSEISEDQKQ 726
Query: 516 VMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
+E Q + + A + M +++ M
Sbjct: 727 AKKELSQQNKDAASKAQKNAAKKMKQMAEEMEQQMQS 763
Score = 37.1 bits (84), Expect = 7.8, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 53/194 (27%), Gaps = 16/194 (8%)
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
+++ +++ + L +VL++ EK+ ++ L E
Sbjct: 582 QLQQKMEMIQKMLNELMESKDSKVLEELKKMMEKSLDEKSLDQLEKFNKNQRNLDKE--L 639
Query: 405 AMISRELDILDSQGNLPECE---GADNPPVSLLKVEYTSPLFK---YQQAESVASALQGV 458
+ L + + E L +P + Q+ E + L+ +
Sbjct: 640 DRTLKLFQELQRKQKIEETSNELKELAEEQEKLSEADANPQDQEKINQKFEDIKKKLEDI 699
Query: 459 NTVVELGVKTGDPSCMDHM-----DTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQ 513
K+ DP D D + + A + +Q +
Sbjct: 700 ENRSNELNKSFDP-MDDKQSEISEDQKQAKKELSQQNKDAAS--KAQKNAAKKMKQMAEE 756
Query: 514 RRVMEEQHLQQQLQ 527
+ QQ Q
Sbjct: 757 MEQQMQSAEMQQAQ 770
>gi|317485513|ref|ZP_07944390.1| hypothetical protein HMPREF0179_01743 [Bilophila wadsworthia 3_1_6]
gi|316923193|gb|EFV44402.1| hypothetical protein HMPREF0179_01743 [Bilophila wadsworthia 3_1_6]
Length = 699
Score = 37.5 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 53/454 (11%), Positives = 112/454 (24%), Gaps = 53/454 (11%)
Query: 99 WCD-QVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYI-S 156
W + F R + E +G ++D E I
Sbjct: 162 WLESDKCRYAFFQRWMDLFDLQCLYPEREKEIGEAFSGLSAHDSDYSYMDDEADIVEQDK 221
Query: 157 VPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHA 216
L + S + + V + + + + D
Sbjct: 222 RVLGSTRWSDPERRRIRPVQLWYPVLEKAVFALFPDGQCVEVNTKLPDAQVYMLVRNAQQ 281
Query: 217 VYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYI-----------VGRYRVR 265
+ S+ + K F + DE F Q P+I V R
Sbjct: 282 LITTSVRKLRV----KTFIGSYELSDEPSPFPHGQYPFIPFIGYLDRYLNPFGVPRMLSG 337
Query: 266 ADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIG 325
+E + +M + L + + + L + LKPG +
Sbjct: 338 QNEEINKRRSMN----LAMLQKRRIIVEEGAADDLQDLYE-EANKPDGFMVLKPGGRSKM 392
Query: 326 ALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDL--------FQVLDDKASRSA 377
+ + Q +E+ ++ + ++ A
Sbjct: 393 EIIEGAQ--LSQYQIQVLEQSEKEIQQISGANDEAMGYTSNANSGKAIELRRQQSSTIMA 450
Query: 378 AESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVE 437
+ R +I +Q + + R D + + + VE
Sbjct: 451 SLFGNYRRSMSRLGQLVIANVQGAWTAEKVLRITDKMTNAERFVTVNQKVLGESGDV-VE 509
Query: 438 YTSPLFKYQQAESVASA-------LQGVNTVVELGVKTGDPSCMDHM-----------DT 479
+ + + V+ A Q +N ++E K P + ++ +
Sbjct: 510 IRNDITQGMYDVIVSDAPATDSVREQNMNLLIEW-CKQSPPEVIPYLMGMAMEMSNLPNK 568
Query: 480 DRVSRFSLWATNT-PAVLIRDTAEVEDIRQQREV 512
D++ P + E++ QQ
Sbjct: 569 DQLMMKLKPMMGITPEEMDMSPEELQQRAQQEAE 602
>gi|197294333|ref|YP_001798874.1| hypothetical protein PAa_0204 [Candidatus Phytoplasma australiense]
gi|171853660|emb|CAM11539.1| Conserved hypothetical protein [Candidatus Phytoplasma australiense]
Length = 1164
Score = 37.5 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 43/393 (10%), Positives = 100/393 (25%), Gaps = 60/393 (15%)
Query: 198 KMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPY 257
K K A N++ + A K + ++ + + + +
Sbjct: 667 KTKQAKLDEINKKIGTLTANKDNLEKTIKDLENDQTVTNYKKIKNRTDWGVRSSSKEIQF 726
Query: 258 I------VGRYRVRAD-EIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP-PTIAVSE 309
Y++ + Y A E Q + L P
Sbjct: 727 PRFWNDKPFTYKIVPKIDFYETGFTQNARGYQAYREEIDKNTIQGESIELSPGKYYCEPS 786
Query: 310 AKQR--NFDLKPGYMNIGALSREGRSLFQPVQFG----NPLPYHEELNRLKESIRSLFLL 363
R + + + E + N +EL+ + ++++ L
Sbjct: 787 INMRNIPYSTHGANLIFSEPTSETEPPQNLFKLDEAKENLKNISQELSNYETNLKNAQLE 846
Query: 364 DLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPEC 423
+ + S +E I L++E I + +
Sbjct: 847 YNQLLENQTPDDS------LQQELNNK-ANHIKTLKNEMQQLEI--------KEQSFRSE 891
Query: 424 EGADNPPVSLLKVEYTSPLFKYQQAESVAS-----ALQGVNTVVE--LGVKTGDPSCMDH 476
LK +YT+ L K QQ + + + + D + +
Sbjct: 892 IDTLKLENKNLKEKYTNDLTKIQQELDATKTENEQLEKEMQEIQAELIKNGNADDALVKQ 951
Query: 477 MDTDRV-SRFS--------LWATNTPAVLIRDTAEVEDIRQQREVQRRV----------- 516
++ + T ++ + E++ +RQ+ + Q
Sbjct: 952 LNHKEAQIKELKGKINTLEANETKLQTIIKQKDEEIKQLRQKVQEQAEQIIKLTTEIENN 1011
Query: 517 ----MEEQHLQQQLQQTSQDIGAKAAGRAMEKK 545
++ QQL+ + + + K
Sbjct: 1012 IEIFKQQAMKIQQLEGAIAGLEGASGSLGSDNK 1044
>gi|307104056|gb|EFN52312.1| hypothetical protein CHLNCDRAFT_58914 [Chlorella variabilis]
Length = 740
Score = 37.5 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 78/256 (30%), Gaps = 16/256 (6%)
Query: 306 AVSEAKQRNFDLKP-GYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLD 364
A + + + ++ L+P G G L Q L + ++E I
Sbjct: 142 AAANSVEADYVLEPQGPQPPGLHQDGQEELEISRQSEALLAILQAGEHVEEVIAQHRADI 201
Query: 365 LFQVLDD-KASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPEC 423
+L AAE +EK + L L++E + S L +LD ++ +
Sbjct: 202 DDSMLQLLARRMKAAELLEKQEAVLQGLQLLYRRLKAEVDRQLASPGLRLLDELMSILDL 261
Query: 424 EGADNPPVSLLKVEYTSPLFKYQQA-------ESVASALQGVNTVVELGVKTGDPSCMDH 476
D + + E + + +A G + D D
Sbjct: 262 GEGDLGSPAAAREERRAQAAAHLRAAFSGSLVGDADVLSLAAQLSASGGSQLADQLVADP 321
Query: 477 MDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAK 536
+D F A L+R E + Q+R E Q+ + S ++
Sbjct: 322 VDP---MVFMAEA----TELLRRVEEQHTQLEAYLQQQRQEEGTGQSQEAVRASLEVEQL 374
Query: 537 AAGRAMEKKLTHDMME 552
R L + ++
Sbjct: 375 LEQRQAAVALVQECLQ 390
>gi|301118911|ref|XP_002907183.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105695|gb|EEY63747.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2213
Score = 37.5 bits (85), Expect = 5.9, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 54/181 (29%), Gaps = 13/181 (7%)
Query: 383 KTREKGAFVGPLIG-GLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSP 441
+E + + E +++ L + ++ + +
Sbjct: 989 MAQEHEKQLAEQHKYRGEVEAERQRLTQVLQ--QESTRFQNLRKEAGEARAQIEAQAMAA 1046
Query: 442 LFKY--QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRD 499
+ + Q + A + + + + ++R L+
Sbjct: 1047 MKQREQQLLDEKARVEEELQLQFSKINEENIELRATVDNLKDINRRKSTEIG---RLMAT 1103
Query: 500 TAEVEDIRQQREVQRRVMEE-----QHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENS 554
+ E E Q R + + M++ +QQ++ S+ + AK + KL EN
Sbjct: 1104 SQEAEQQIQSRMQEAQKMQQLTEEVARAKQQMETLSKTLAAKESAHDEAMKLQSAEFENQ 1163
Query: 555 Y 555
Y
Sbjct: 1164 Y 1164
>gi|145525567|ref|XP_001448600.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416155|emb|CAK81203.1| unnamed protein product [Paramecium tetraurelia]
Length = 891
Score = 37.5 bits (85), Expect = 6.4, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 69/245 (28%), Gaps = 28/245 (11%)
Query: 323 NIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESME 382
NI + + Q ++ + + + + E ++ + + D+ + E
Sbjct: 379 NITQQREQRQPTVQQIETIHEEELKQTIQEITEELKKPHKKHMTKAQRDEQKKRKKEIQR 438
Query: 383 KTREKGAFVGPLIGGLQSEFIG---------AMISRELDILDSQGNLPECEGADNPPVSL 433
+ G + E + + D + L +
Sbjct: 439 LHEDIERIKKEKGGDFEYEKTDSDSEDRFRRKKLQNQFDDMFKPRQLSRRQSHQFDENEG 498
Query: 434 LKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTP 493
++Y S Q+ E + + + + + +
Sbjct: 499 EDLDYASE----QEIEDRTKIQRVEQIIQQKRDPNYQYNPQEFWQQE------------- 541
Query: 494 AVLIRDTAEVEDIR-QQREVQR-RVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMM 551
+ +V I QQR+ + + + L+QQ+Q +Q +++
Sbjct: 542 VKINVKKPQVSSIASQQRQQEMFYQFQREKLEQQMQMINQKYSQSPTDPPQQQQANPLQY 601
Query: 552 ENSYG 556
+ S+G
Sbjct: 602 QMSHG 606
>gi|332186618|ref|ZP_08388361.1| HAMP domain protein [Sphingomonas sp. S17]
gi|332013270|gb|EGI55332.1| HAMP domain protein [Sphingomonas sp. S17]
Length = 609
Score = 37.5 bits (85), Expect = 6.4, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 65/242 (26%), Gaps = 13/242 (5%)
Query: 309 EAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRS-LFLLDLFQ 367
+ + S Q + ++ + +++
Sbjct: 316 STVVTAASSINNGAGDIRQASDDLSQRTEQQAASLEETAAAMDEITTTVKETAAGASQAN 375
Query: 368 VLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGAD 427
+ +A A ES E R +G I SE I +I+ I L G +
Sbjct: 376 RIVGEAREEARESGEIVRRAVQAMGG-IERASSE-ISEIIAVIDGISFQTNLLALNAGVE 433
Query: 428 NPPVSLLK----VEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMD-TDRV 482
V + Q++ A ++ T V+ G + D R+
Sbjct: 434 AARAGDAGKGFAVVASEVRALAQRSADAAKDVKTRITASSDQVEEGVRLVGETGDALQRI 493
Query: 483 SRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVM-----EEQHLQQQLQQTSQDIGAKA 537
+ + + QQ M + + +Q ++ + ++A
Sbjct: 494 IQRIAEIDGLVSNIANSADRQATGLQQVNTAVAEMDGMTQQNAAMVEQATAAARSLASEA 553
Query: 538 AG 539
G
Sbjct: 554 DG 555
>gi|330830183|ref|YP_004393135.1| phage tail tape measure protein, TP901 family [Aeromonas veronii
B565]
gi|328805319|gb|AEB50518.1| Phage tail tape measure protein, TP901 family [Aeromonas veronii
B565]
Length = 811
Score = 37.5 bits (85), Expect = 6.5, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 26/89 (29%)
Query: 464 LGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQ 523
+ D +DT + + + ++ R Q +R ++ Q
Sbjct: 22 AASGQSRITAKDLVDTKKRIKELEAQSGQIDGYRTLGQQIGATRAQLTQAQRDAQQMAQQ 81
Query: 524 QQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
+ ++A +A +K E
Sbjct: 82 FAKVEQPTKAMSRAMEQAKQKVRDLSQQE 110
>gi|327271670|ref|XP_003220610.1| PREDICTED: nuclear receptor coactivator 6-like [Anolis
carolinensis]
Length = 2035
Score = 37.1 bits (84), Expect = 7.9, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 65/261 (24%), Gaps = 19/261 (7%)
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
+ P L PG+ + +S G P
Sbjct: 465 SNFMVMQQQNQGPQGLHPGLGGMPKRLPPGFPSGQTNQNFMQSQVPSTAPGTPASTGAPQ 524
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
+ +S + + ++ S G + ++
Sbjct: 525 LQTSQSAQHTGGQGN-GLSQNQMQVQHGPSNMMQSNLMGLHGNMNNQQAGNSGVPQVN-- 581
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
+ + G + + + V + Q S+ Q + + +L ++
Sbjct: 582 MGSMQ--GQPSQGPQSQLMGMHQPIVSTQGQMVNIQPQGSLNPQNQMILSRAQLMPQSQM 639
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREV---------QRRVMEEQH 521
+ + + TP + + + ++ Q+ M EQ
Sbjct: 640 MVAPQNQNLGPTQQRM-----TPPKQMLPQQGQQMMAAHNQMMGPQGQVLLQQNSMMEQM 694
Query: 522 LQQQLQQTSQDIGAKAAGRAM 542
+ Q+Q Q GA+ M
Sbjct: 695 MTNQMQGNKQQFGAQNQSNVM 715
>gi|260802925|ref|XP_002596342.1| hypothetical protein BRAFLDRAFT_76142 [Branchiostoma floridae]
gi|229281597|gb|EEN52354.1| hypothetical protein BRAFLDRAFT_76142 [Branchiostoma floridae]
Length = 2545
Score = 37.1 bits (84), Expect = 8.2, Method: Composition-based stats.
Identities = 18/271 (6%), Positives = 74/271 (27%), Gaps = 26/271 (9%)
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH 347
+ + + + ++ ++ + L E +
Sbjct: 308 LQDSSKEALQDKNRVIDQLNHALRTKDQLIQQLNQDKADLVAEKVKPLEAQVQNLTQELR 367
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ +++ I +++ ++ E ++ ++ + + +
Sbjct: 368 VKEGNMQDDINRYQQQVEVSKKNNQEIQALLEDQQRKLDEYEIAAGQMTRDHDKKEKEIK 427
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS-------------- 453
E +L+++ E + S +K++ + L + + + + +
Sbjct: 428 ELEKLVLEAEDENEELKRKLQDMDSDVKLQEQNALKRDKAIQGLTAAIQNKSKEIDELCE 487
Query: 454 -ALQGVNTVVELGVKTGDPSCMDHMDTDR----VSRFSLWATNTPAVLIRDTAEVEDIR- 507
+ ++ + + +S T + AE + ++
Sbjct: 488 QIEELQQSLAQARETAHKAQLQQFQGVEEQQQALSDKEAEITGLQGKVHEKDAENQQLKK 547
Query: 508 ------QQREVQRRVMEEQHLQQQLQQTSQD 532
Q+ + ++ +E Q +D
Sbjct: 548 SLRKKEQEIDQLQQAAQEADDQADEALRDKD 578
>gi|329297591|ref|ZP_08254927.1| hypothetical protein Pstas_15486 [Plautia stali symbiont]
Length = 337
Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 52/207 (25%), Gaps = 21/207 (10%)
Query: 326 ALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF--LLDLFQVLDDKASRSAAESMEK 383
A + ++ I F L F L + S A
Sbjct: 96 AQREGALHGLLMFGVSTLITLWLAISLASGIIGGAFNILGSGFNALGNGISAVAPSVTNM 155
Query: 384 TREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLF 443
+EK + LQ+E L G V +
Sbjct: 156 AKEKLQENNINLDDLQNELQTT--------LRQTGK-----PELQSENLQQDVNSEANNA 202
Query: 444 KYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
+ Q ++ + N + H DT + + A + E
Sbjct: 203 QNQAKQTAQNPQNAGNDIANWIRGV----LSRHADTLQAADRDALKNIIKARTGKSDQEA 258
Query: 504 EDIRQQREVQRRVMEE--QHLQQQLQQ 528
E I Q E + + Q L+Q+ +Q
Sbjct: 259 EQIVNQTEQSYQQAMQKYQQLKQEAEQ 285
>gi|322367864|ref|ZP_08042434.1| Patched family protein [Haladaptatus paucihalophilus DX253]
gi|320552571|gb|EFW94215.1| Patched family protein [Haladaptatus paucihalophilus DX253]
Length = 1255
Score = 36.7 bits (83), Expect = 9.6, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 75/233 (32%), Gaps = 25/233 (10%)
Query: 340 FGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKA----SRSAAESMEKTREKGAFVGPLI 395
+ L++ L + S ES + + KG +
Sbjct: 193 QQRSDELNRSKQDLQQRGEELKEEGQELKQRGQTLQQRSDELNESKAQLQAKGQELQAQA 252
Query: 396 GGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYT----SPLFKYQQAESV 451
L +E + ++ ++ L E + L+V + + ES+
Sbjct: 253 KQL-NESKAQLRNQSEELKQRAQELNESRAELEQRQANLEVRAQELNQTQRELAARNESL 311
Query: 452 ASALQGVNTVVELGVKTGDPSCMDHMDT--DRVSRFSLWATNTPAVLIRDTAEVEDIRQQ 509
+ + G D +D+ + + A L ++A ++ RQ+
Sbjct: 312 QERRATIEEAHQNG-TINDTEYEQRLDSLREEQAELKADQ----AQLANESAALQQDRQE 366
Query: 510 REVQRRVMEE---------QHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMEN 553
EV + +E+ L+QQ +Q + G A RA ++ + ++ +
Sbjct: 367 LEVDAQQLEQRAAELESDKAELEQQSEQLQESAGQLQAERAELEQRSAELQQE 419
>gi|149278197|ref|ZP_01884335.1| hypothetical protein PBAL39_11587 [Pedobacter sp. BAL39]
gi|149230963|gb|EDM36344.1| hypothetical protein PBAL39_11587 [Pedobacter sp. BAL39]
Length = 1110
Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 52/303 (17%)
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
++L+E L Q ++ E+K+ L + + F +
Sbjct: 502 KKLDEGSQTLKQQMAKAIKLAGTVEKESKKLGETLL---------------DKKQLTFDD 546
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
+ L++ K+ ++ + E+ +EK + L + +
Sbjct: 547 KKQVEQLLDKRKQLEAAVKEIQQLNQQQTSDKAENNTLTEELKEKQRQIDELFNHVLDDK 606
Query: 403 IGAMISRELDILDSQGNLPECEGA--DNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
A++ + ++D + LK E L Y+Q E + Q ++
Sbjct: 607 TKALLEKLQQMMDQNNKEQTHDELSKMQVDNKSLKKELDRILELYKQLEYEQNLQQNIDQ 666
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTA-----EVEDIRQQREV--- 512
+ EL K S + N P ++ E E IR++ +
Sbjct: 667 LKELAKKQEALS-----KKSTAAEQKTADRNAPKEELKKQQRENAAEFEQIRKELQQLKE 721
Query: 513 ----------------------QRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDM 550
++ E+ L++ Q + + KAAG+ + +
Sbjct: 722 KNEQLEHPNDFSMPEKESADIKSQQEQSEESLEKNNLQKAAEHQKKAAGQLEQMAKKMEE 781
Query: 551 MEN 553
M+
Sbjct: 782 MQQ 784
>gi|254675300|ref|NP_598708.3| nuclear mitotic apparatus protein 1 [Mus musculus]
Length = 2094
Score = 36.7 bits (83), Expect = 9.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 37/107 (34%), Gaps = 12/107 (11%)
Query: 448 AESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
SV++ Q + + G T A L + E+ ++
Sbjct: 470 QSSVSNLSQAKEELEQASQAQGAQLTAQ----------LTSMTGLNATLQQRDQELASLK 519
Query: 508 QQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENS 554
+Q + ++ M + +Q+ Q +Q + + + KL +E +
Sbjct: 520 EQAKKEQAQMLQTMQEQE--QAAQGLRQQVEQLSSSLKLKEQQLEEA 564
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.308 0.122 0.289
Lambda K H
0.267 0.0371 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,813,804,080
Number of Sequences: 14124377
Number of extensions: 97158073
Number of successful extensions: 4014518
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 24508
Number of HSP's successfully gapped in prelim test: 6741
Number of HSP's that attempted gapping in prelim test: 2193837
Number of HSP's gapped (non-prelim): 691387
length of query: 556
length of database: 4,842,793,630
effective HSP length: 144
effective length of query: 412
effective length of database: 2,808,883,342
effective search space: 1157259936904
effective search space used: 1157259936904
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 84 (37.1 bits)