HHsearch alignment for GI: 254781215 and conserved domain: COG0470

>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair].
Probab=92.22  E-value=0.78  Score=23.85  Aligned_cols=108  Identities=22%  Similarity=0.223  Sum_probs=64.5

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCC-------------------EEEEEECCHHHHHHHHHHHHHHHHHHCHHCCC
Q ss_conf             46502576597899999999999808996-------------------69998085899999999999999985500013
Q gi|254781215|r   80 GAISAGRGIGKTTLNAWLVLWLMSTRPGI-------------------SVICLANSETQLKTTLWAEVSKWLSLLPNKHW  140 (511)
Q Consensus        80 ~aV~sgrG~GKS~l~a~l~lw~l~~~p~~-------------------kv~vtApt~~Q~~~ilw~Ei~k~~~~~~~~~~  140 (511)
T Consensus        27 lL~~Gp~G~Gktt~a~~lA~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~lel~~s~~~~~~i~~~~vr~~~~~~~----  102 (325)
T COG0470          27 LLFYGPPGVGKTTAALALAKELLCENPTGLLPCGHCRSCKLIPAGNHPDFLELNPSDLRKIDIIVEQVRELAEFLS----  102 (325)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCC----
T ss_conf             0037999997899999999996586643345520022444320256886599773213333006999999998604----


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHHHCCCCC
Q ss_conf             44432222223334443211123578616985303575561002120267614999711102997889888888507998
Q gi|254781215|r  141 FEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGFLTERNA  220 (511)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~Lt~~g~  220 (511)
T Consensus       103 -------------------------------------------~~~~~~~~-kviiidead~mt~~A~nallk~lEep~~  138 (325)
T COG0470         103 -------------------------------------------ESPLEGGY-KVVIIDEADKLTEDAANALLKTLEEPPK  138 (325)
T ss_pred             -------------------------------------------CCCCCCCC-EEEEEECCCCCCHHHHHHHHHHCCCCCC
T ss_conf             -------------------------------------------46566772-6999732032698888767543324888


Q ss_pred             CEEEEEECC-CCCCCC
Q ss_conf             138998238-998765
Q gi|254781215|r  221 NRFWIMTSN-PRRLSG  235 (511)
Q Consensus       221 ~~~~i~~~n-P~~~~g  235 (511)
T Consensus       139 ~~~~il~~n~~~~il~  154 (325)
T COG0470         139 NTRFILITNDPSKILP  154 (325)
T ss_pred             CEEEEEEECCHHHCHH
T ss_conf             7169997498555647