HHsearch alignment for GI: 254781215 and conserved domain: COG1484

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=95.70  E-value=0.15  Score=28.40  Aligned_cols=74  Identities=16%  Similarity=-0.022  Sum_probs=49.8

Q ss_pred             HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             42145577756555784589999999999987405655542101246502576597899999999999808996699980
Q gi|254781215|r   35 FFPWGEKGTPLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLA  114 (511)
Q Consensus        35 ~~~w~~~~~~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtA  114 (511)
T Consensus        69 ~~p~~-k~~~~~d~~~~~~~~~~~l~~~~~~~~~~~-----~~~nl~l~G~~G~GKthLa~Ai~~~l~-~~g~sv~f~~~  141 (254)
T COG1484          69 SFPAK-KTFEEFDFEFQPGIDKKALEDLASLVEFFE-----RGENLVLLGPPGVGKTHLAIAIGNELL-KAGISVLFITA  141 (254)
T ss_pred             CCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHC-----CCCCEEEECCCCCCHHHHHHHHHHHHH-HCCCEEEEEEH
T ss_conf             68755-785430235885566999999999998732-----588289989999879999999999999-83984999885


Q ss_pred             C
Q ss_conf             8
Q gi|254781215|r  115 N  115 (511)
Q Consensus       115 p  115 (511)
T Consensus       142 ~  142 (254)
T COG1484         142 P  142 (254)
T ss_pred             H
T ss_conf             9