HHsearch alignment for GI: 254781215 and conserved domain: COG1783

>COG1783 XtmB Phage terminase large subunit [General function prediction only].
Probab=99.24  E-value=1.5e-08  Score=72.58  Aligned_cols=342  Identities=17%  Similarity=0.154  Sum_probs=199.5

Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             65025765978999999999998089966999808589999999999999998550001344432222223334443211
Q gi|254781215|r   81 AISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHC  160 (511)
Q Consensus        81 aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (511)
T Consensus        28 i~~G~rGS~KSy~~alk~i~kl~~~~~~d~lvIR~v~nt~k~St~~~~~e~l~e~gv~~~f~~~~s~pe---------~i   98 (414)
T COG1783          28 IAKGGRGSSKSYATALKNIEKLLSEPGIDVLVIREVENTHKQSTYALFKEALSELGVTKFFKISKSSPE---------II   98 (414)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHH---------HE
T ss_conf             998267775008889999999970778757999972354412089999999998384011577417866---------60


Q ss_pred             CCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCC-HHHHHHHHHH-HCCCCCCEEEEEECCCCCCCCHHH
Q ss_conf             12357861698530357556100212026761499971110299-7889888888-507998138998238998765567
Q gi|254781215|r  161 SLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTP-DVINLGILGF-LTERNANRFWIMTSNPRRLSGKFY  238 (511)
Q Consensus       161 ~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~-d~i~e~i~~~-Lt~~g~~~~~i~~~nP~~~~g~fy  238 (511)
T Consensus        99 ~~~~G~ri~F~-----G~ddp~klKSi~~~~~s~~WfEE~~e~s~e~~~e~l~~l~~~~~~~~--~~~~snpv~~~pw~~  171 (414)
T COG1783          99 LKDTGQRIIFK-----GLDDPAKLKSIAVNWISDLWFEEASEFSYEDDIELLVELRRRELKGH--IILSSNPVSFNPWTY  171 (414)
T ss_pred             ECCCCCEEEEE-----CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CEEECCCCCCCCCCH
T ss_conf             21258678994-----58987885230100433555787763303456888777641223777--246326434588538


Q ss_pred             HHH----HC--CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEE-----ECHHHHHHHHH
Q ss_conf             653----03--52474179840433677897789999975189801354443175666678737-----55999988640
Q gi|254781215|r  239 EIF----NK--PLDDWKRFQIDTRTVEGIDPSFHEGIIARYGLDSDVTRVEVCGQFPQQDIDSF-----IPLNIIEEALN  307 (511)
Q Consensus       239 ~~~----~~--~~~~w~~~~i~~~~~p~~~~~~ie~~~~~~geds~~~r~evlgeFp~~~~~~~-----i~~~~ie~a~~  307 (511)
T Consensus       172 ~~w~~~~~Dek~~~dt~~hhtT~~dn~fL~~~~v~~~ed~k~~d~d~yri~~~gev~v~~~~v~~~~e~~~~d~v~~~i~  251 (414)
T COG1783         172 KHWLEFAVDEKKKADTYIHHTTYRDNLFLGFDDVDELEDLKKNDPDLYRIVRDGEVGVKNGDVFDQFEVKPFDAVKFAID  251 (414)
T ss_pred             HHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEECCHHHCCCHHHHHHHHH
T ss_conf             88888874435578668886201356667778999998764128541238997789860752546321577288776677


Q ss_pred             CCCCCCCCCEEEEEEECCCCCCCCEEEEE--ECCCE--EEEEEECCCCCHHHHHHHHHHHHHHCCCC--EEEEEECCCCH
Q ss_conf             76531899708999623334784179998--22755--89987327789889999999999861888--29980068763
Q gi|254781215|r  308 REPCPDPYAPLIMGCDIAEEGGDNTVVVL--RRGPV--IEHLFDWSKTDLRTTNNKISGLVEKYRPD--AIIIDANNTGA  381 (511)
Q Consensus       308 r~~~~~~~~~~viGvDVAr~G~D~svi~~--r~G~~--v~~~~~~~~~d~~~~a~~i~~~~~~~~~~--~i~iD~~GvG~  381 (511)
T Consensus       252 ~i~~~s------~gm~~Gf~~~~n~l~~~~v~~~~k~l~~~~ey~~~~~---~~d~~~~~i~e~n~~k~~~~~dsAe~--  320 (414)
T COG1783         252 NISRPS------TGMDFGFTAKFNRLLKLAVDPGKKYLYIYVEYYANKM---LDDKKTKDISEFNKTKSVIALDSAEP--  320 (414)
T ss_pred             HHCCCC------CCCEEEEEECCCEEEEEEEECCCCEEEEEEECHHHHH---HHHHHHHHHHHHHHCCEEEEECCCCH--
T ss_conf             615565------5402425740757788887046540479861122443---43567899987541122797046347--


Q ss_pred             HHHHHHHHCCCEEEE-ECCCCCCCCHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHCCCEEEECCCCEEEEEECH
Q ss_conf             688989864982798-42777766402552279999999999997-0899981899999857967998799849998412
Q gi|254781215|r  382 RTCDYLEMLGYHVYR-VLGQKRAVDLEFCRNRRTELHVKMADWLE-FASLINHSGLIQNLKSLKSFIVPNTGELAIESKR  459 (511)
Q Consensus       382 gV~d~L~~~g~~v~~-v~~~~~~~~~~~y~N~rae~~~~~re~l~-~g~l~~d~~l~~el~~~~~~~~~~~gki~ie~Kk  459 (511)
T Consensus       321 kli~yfk~~G~~~v~a~k~~~s----------~lq~~k~l-~~fk~i~~~p~~en~I~e~~~~~-y~~D---------k~  379 (414)
T COG1783         321 KLIQYFKDVGVGMVYAKKFKGS----------RLQKIKKL-KRFKAIYSSPRCENTINEFNHLE-YKKD---------KK  379 (414)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCC----------HHHHHHHH-HHHCCEEECCCCCCHHHHHEEEE-EEEC---------CC
T ss_conf             7889998628651135567630----------77878988-85125780687652111110113-3201---------22


Q ss_pred             HHCCCCCCHHH
Q ss_conf             54899989899
Q gi|254781215|r  460 VKGAKSTDYSD  470 (511)
Q Consensus       460 krg~~SPD~AD  470 (511)
T Consensus       380 ~~~i~~p~~id  390 (414)
T COG1783         380 GNGIDSPFTID  390 (414)
T ss_pred             CCCCCCCCCCC
T ss_conf             56889853367