HHsearch alignment for GI: 254781215 and conserved domain: COG3972

>COG3972 Superfamily I DNA and RNA helicases [General function prediction only].
Probab=95.24  E-value=0.052  Score=31.25  Aligned_cols=119  Identities=18%  Similarity=0.079  Sum_probs=65.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCH---HHHHHHHHHHHHH--------HHHHCHHCCCCCCCCCCCCCCCC
Q ss_conf             576597899999999999808996699980858---9999999999999--------99855000134443222222333
Q gi|254781215|r   85 GRGIGKTTLNAWLVLWLMSTRPGISVICLANSE---TQLKTTLWAEVSK--------WLSLLPNKHWFEMQSLSLHPAPW  153 (511)
Q Consensus        85 grG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~---~Q~~~ilw~Ei~k--------~~~~~~~~~~~~~~~~~~~~~~~  153 (511)
T Consensus       184 LAGSGKT~~La~Kaa~lh~knPd~~I~~Tfftk~L~s~~r~l-v~~F~f~~~e~~pdW~~~l~~h~wgG~t~~g~y~~~~  262 (660)
T COG3972         184 LAGSGKTELLAHKAAELHSKNPDSRIAFTFFTKILASTMRTL-VPEFFFMRVEKQPDWGTKLFCHNWGGLTKEGFYGMYR  262 (660)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHH-HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHH
T ss_conf             247873029887778974479986389986667888999999-9999998862488724268884357878886038899


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCCC-------CCHHHHCCC-CCCEEEEECCHHCCCHHHHHHHHHHHCC
Q ss_conf             444321112357861698530357556-------100212026-7614999711102997889888888507
Q gi|254781215|r  154 YSDVLHCSLGIDSKHYSTMCRTYSEER-------PDTFVGHHN-TYGMAIINDEASGTPDVINLGILGFLTE  217 (511)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~s~~~-------~ea~~G~h~-~~~~lvI~DEAsgI~d~i~e~i~~~Lt~  217 (511)
T Consensus       263 ~~~~------~-------~~~~fsg~g~~F~~aC~eli~~~~~~~~yD~ilIDE~QDFP~~F~~Lcf~~tkd  321 (660)
T COG3972         263 YICH------Y-------YEIPFSGFGNGFDAACKELIADINNKKAYDYILIDESQDFPQSFIDLCFMVTKD  321 (660)
T ss_pred             HHHC------C-------CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf             9842------6-------654547877406799999998642564231799424554778999999998247