HHsearch alignment for GI: 254781215 and conserved domain: COG5323
>COG5323 Uncharacterized conserved protein [Function unknown].
Probab=99.67 E-value=4.2e-15 Score=113.84 Aligned_cols=343 Identities=17% Similarity=0.201 Sum_probs=231.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCH-HCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 465025765978999999999998089966999808589999999999999998550-0013444322222233344432
Q gi|254781215|r 80 GAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSLLP-NKHWFEMQSLSLHPAPWYSDVL 158 (511)
Q Consensus 80 ~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 158 (511)
T Consensus 39 WL~~GGRGsGKTrAGAeWv~~~Algkp--SiALvgeTl~DaREVMidGpSGi~~~~~~~RPr~EaSRR---RL~WpN--- 110 (410)
T COG5323 39 WLMLGGRGSGKTRAGAEWVTWNALGKP--SIALVGETLHDAREVMIDGPSGIMYHAGASRPRLEASRR---RLDWPN--- 110 (410)
T ss_pred EEEECCCCCCCCCCCCEEEEEHHCCCC--CHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHH---HHCCCC---
T ss_conf 667636567765555300221102684--065540100114676314827888763014721454556---303688---
Q ss_pred CCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCC--HHHHHHHHHHHC-CCCCCEEEEEECCCCCCCC
Q ss_conf 1112357861698530357556100212026761499971110299--788988888850-7998138998238998765
Q gi|254781215|r 159 HCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTP--DVINLGILGFLT-ERNANRFWIMTSNPRRLSG 235 (511)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~--d~i~e~i~~~Lt-~~g~~~~~i~~~nP~~~~g 235 (511)
T Consensus 111 -----------GAvA~~FSsEDPeSLRGPQ---Fh~AW~DEl~kWk~PqETw~MLqFGLRLGe~PR--qvVTTTPrp~p- 173 (410)
T COG5323 111 -----------GAVAYAFSSEDPDSLRGPQ---FHLAWTDELLKWKEPQETWAMLQFGLRLGEDPR--QVVTTTPRPIP- 173 (410)
T ss_pred -----------CCEEEEECCCCHHHCCCCC---CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH--HHEECCCCCCH-
T ss_conf -----------5014430358803204852---006777887447984889999987665167840--10205998627-
Q ss_pred HHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHCCCCCCCC
Q ss_conf 56765303524741798404336778977899999751898013544431756666787375599998864076531899
Q gi|254781215|r 236 KFYEIFNKPLDDWKRFQIDTRTVEGIDPSFHEGIIARYGLDSDVTRVEVCGQFPQQDIDSFIPLNIIEEALNREPCPDPY 315 (511)
Q Consensus 236 ~fy~~~~~~~~~w~~~~i~~~~~p~~~~~~ie~~~~~~geds~~~r~evlgeFp~~~~~~~i~~~~ie~a~~r~~~~~~~ 315 (511)
T Consensus 174 -lLKaLl~dptv~~trm~Ta~NAgNLapgFl~t~a~rYg-GTRLgrQEldGelvee-~GaLw~r~dle~c~ea~--p~pL 248 (410)
T COG5323 174 -LLKALLADPTVALTRMGTAANAGNLAPGFLRTLASRYG-GTRLGRQELDGELVEE-DGALWRREDLERCREAR--PAPL 248 (410)
T ss_pred -HHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHC-CCCHHHHHCCCEEECC-CCCCCCHHHHHHHHHCC--CCCC
T ss_conf -89988428612545054322445657799999999845-4411355528778636-77300287899998618--9870
Q ss_pred CEEEEEEEC-CCCCCCCEEEEE---ECCC-EEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHC
Q ss_conf 708999623-334784179998---2275-58998732778988999999999986188829980068763688989864
Q gi|254781215|r 316 APLIMGCDI-AEEGGDNTVVVL---RRGP-VIEHLFDWSKTDLRTTNNKISGLVEKYRPDAIIIDANNTGARTCDYLEML 390 (511)
Q Consensus 316 ~~~viGvDV-Ar~G~D~svi~~---r~G~-~v~~~~~~~~~d~~~~a~~i~~~~~~~~~~~i~iD~~GvG~gV~d~L~~~ 390 (511)
T Consensus 249 ~RiVVAVDPPA~~g~~sCGIVVaG~~~gr~~VLADes~~g~~PagWArravAa~r~heADa~VAEvNQGGeMVravLa~~ 328 (410)
T COG5323 249 DRIVVAVDPPATAGGDSCGIVVAGRRDGRAFVLADESARGLSPAGWARRAVAAARAHEADALVAEVNQGGEMVRAVLAQA 328 (410)
T ss_pred CEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 23799726987677875116998850581699612302478821268999999875113478887713417999999604
Q ss_pred CC--EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH---HHHHHHHHCCCEEEECCCCEEEEEECHHHCCCC
Q ss_conf 98--2798427777664025522799999999999970899981---899999857967998799849998412548999
Q gi|254781215|r 391 GY--HVYRVLGQKRAVDLEFCRNRRTELHVKMADWLEFASLINH---SGLIQNLKSLKSFIVPNTGELAIESKRVKGAKS 465 (511)
Q Consensus 391 g~--~v~~v~~~~~~~~~~~y~N~rae~~~~~re~l~~g~l~~d---~~l~~el~~~~~~~~~~~gki~ie~Kkkrg~~S 465 (511)
T Consensus 329 Dp~~pv~lvRASrG-----K--~~RAEPVAAL---YEQGRVrH~GrF~aLEdem~d-----fgp~g----------LssS 383 (410)
T COG5323 329 DPPCPVKLVRASRG-----K--RARAEPVAAL---YEQGRVRHCGRFVALEDEMMD-----FGPGG----------LSSS 383 (410)
T ss_pred CCCCCEEEEECCCC-----C--HHCCCHHHHH---HHCCCEEECCCCHHHHHHHHH-----HCCCC----------CCCC
T ss_conf 99986276661456-----3--1013616998---855630004651667898860-----08885----------5678
Q ss_pred CCHHHHHHHHHC
Q ss_conf 898999999975
Q gi|254781215|r 466 TDYSDGLMYTFA 477 (511)
Q Consensus 466 PD~ADAl~l~fa 477 (511)
T Consensus 384 PDRlDALVWAv~ 395 (410)
T COG5323 384 PDRLDALVWAVS 395 (410)
T ss_pred CHHHHHHHHHHH
T ss_conf 037788999999