HHsearch alignment for GI: 254781215 and conserved domain: COG5525
>COG5525 Bacteriophage tail assembly protein [General function prediction only].
Probab=95.25 E-value=0.049 Score=31.45 Aligned_cols=172 Identities=10% Similarity=0.041 Sum_probs=92.7
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 76421455777565557845899999999999874056555421012465025765978999999999998089966999
Q gi|254781215|r 33 LHFFPWGEKGTPLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVIC 112 (511)
Q Consensus 33 ~~~~~w~~~~~~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~v 112 (511)
T Consensus 32 ~y~~~~~sa~~~g~W~t~p--~~~~~~n~~----------~~~~~~~V~f~k~ArvG~T~m~~gw~~Y~I~~-~p~~mlv 98 (611)
T COG5525 32 NYMLPKESAYEEGRWETLP--FQIAIMNAM----------GSDEIRAVNFVKSARVGKTKMLLGWIGYFIEH-KPRNMLV 98 (611)
T ss_pred HCCCCCCCCCCCCCCCCCH--HHHHHHHCC----------CCCCCEEEEEEECCCCCCEEEECCEEEEEEEE-CCCCCEE
T ss_conf 3024765578877776726--899987536----------98641689997402036224542258999986-5765233
Q ss_pred EECCHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCC
Q ss_conf 80858999999999999999855000134443222222333444321112357861698530357556100212026761
Q gi|254781215|r 113 LANSETQLKTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYG 192 (511)
Q Consensus 113 tApt~~Q~~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~ 192 (511)
T Consensus 99 ~qpt~~~a~~~~k~k~~pti~~~p~l~--------~~ls~~~~dNn~~~K~f~~G~~l~~g~~-------s~~~~r~~s~ 163 (611)
T COG5525 99 VQPTDEKAREHSKTKVEPTIRDVPSLV--------SLLSPSRNDNNLTDKRFPGGVFLMIGWK-------SAKNYRSISV 163 (611)
T ss_pred ECCCHHHHHHHHHHHCCCCHHCCHHHH--------HHCCCCCCCCCEECCCCCCCEEEEECCC-------CCCCCCCCCH
T ss_conf 336555779988875075020063378--------6527656787311023347727972565-------4565667644
Q ss_pred EEEEECCHHCCCHHHH------HHHHHHHCCCCCCEEEEEECCCCCC
Q ss_conf 4999711102997889------8888885079981389982389987
Q gi|254781215|r 193 MAIINDEASGTPDVIN------LGILGFLTERNANRFWIMTSNPRRL 233 (511)
Q Consensus 193 ~lvI~DEAsgI~d~i~------e~i~~~Lt~~g~~~~~i~~~nP~~~ 233 (511)
T Consensus 164 ~~v~lde~d~fpedv~~EGs~~sl~~kR~~t-~~~~~~l~~stP~i~ 209 (611)
T COG5525 164 DVVVLDELDRFPEDVEGEGSATSLASKRITT-MSWGKSLVESTPTIP 209 (611)
T ss_pred HHHHHHHHHCCCHHHCCCCCHHHHHHHHHCC-CCCCCEEEECCCCCC
T ss_conf 5656667743651222688876778876024-556622441378788