HHsearch alignment for GI: 254781215 and conserved domain: PRK00254

>PRK00254 ski2-like helicase; Provisional.
Probab=98.11  E-value=0.00018  Score=46.75  Aligned_cols=144  Identities=15%  Similarity=0.081  Sum_probs=78.7

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf             45899999999999874056555421012465025765978999999999998089966999808589999999999999
Q gi|254781215|r   51 PRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSK  130 (511)
Q Consensus        51 P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k  130 (511)
T Consensus        24 l~p~Q~e~l~~---g~~~g~--------NllvsaPT~sGKTlvAElail~~~l~-~~~k~iyi~P~kALa~EK~-~~f~~   90 (717)
T PRK00254         24 LYPPQAEALTS---GVLEGK--------NLLIAIPTASGKTLIAEIAMVNKLLR-EGGKAVYLVPLKALAEEKF-REFKD   90 (717)
T ss_pred             CCHHHHHHHHH---HHCCCC--------CEEEECCCCCCHHHHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHH-HHHHH
T ss_conf             68999999874---233698--------18998998874899999999999985-2992999926799999999-99987


Q ss_pred             HHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCC------CCCEEEEECCHHCCC
Q ss_conf             99855000134443222222333444321112357861698530357556100212026------761499971110299
Q gi|254781215|r  131 WLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHN------TYGMAIINDEASGTP  204 (511)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~------~~~~lvI~DEAsgI~  204 (511)
T Consensus        91 ~~~~g-----~~V~---~~tGd~--~~~~~~l--~~~d-IiV~------T~Ek~dsl~r~~~~~l~~i~lvViDEiH~ig  151 (717)
T PRK00254         91 WEVLG-----LRVA---MATGDY--DSKDEWL--GKYD-IIIA------TAEKFDSLLRHGSSWIKDVKLLVADEIHLIG  151 (717)
T ss_pred             HHHCC-----CEEE---EEECCC--CCCCCCC--CCCC-EEEE------CHHHHHHHHHCCHHHHHCCCEEEEECEEECC
T ss_conf             77449-----8898---974898--8870104--6899-9998------8899999997162565326989997607888


Q ss_pred             H----HHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             7----889888888507998138998238
Q gi|254781215|r  205 D----VINLGILGFLTERNANRFWIMTSN  229 (511)
Q Consensus       205 d----~i~e~i~~~Lt~~g~~~~~i~~~n  229 (511)
T Consensus       152 D~~RG~~lE~~l~~l~~-~~q--iIgLSA  177 (717)
T PRK00254        152 SRDRGATLEFILTHMLG-RAQ--IIGLSA  177 (717)
T ss_pred             CCCCHHHHHHHHHHHHC-CCE--EEEEEE
T ss_conf             98740999999995100-366--999963