HHsearch alignment for GI: 254781215 and conserved domain: PRK01172
>PRK01172 ski2-like helicase; Provisional.
Probab=98.01 E-value=0.00023 Score=46.16 Aligned_cols=156 Identities=13% Similarity=0.053 Sum_probs=81.2
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 45899999999999874056555421012465025765978999999999998089966999808589999999999999
Q gi|254781215|r 51 PRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSK 130 (511)
Q Consensus 51 P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k 130 (511)
T Consensus 23 l~p~Q~ea~~~~~~----gk--------NllvsaPTgsGKTlvAe~ai~~~l~--~~~k~iyi~P~kAL~~EK-~~~~~~ 87 (674)
T PRK01172 23 LYDHQRMAIEQLRK----GE--------NVIVSVPTAAGKTLIAYSAIYETFL--AGLKSIYIVPLRSLAMEK-YEELSR 87 (674)
T ss_pred CCHHHHHHHHHHHC----CC--------CEEEECCCCCCHHHHHHHHHHHHHH--HCCCEEEECCHHHHHHHH-HHHHHH
T ss_conf 89899999999977----99--------5999789998699999999999998--589799987789999999-999998
Q ss_pred HHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCC---CCCCEEEEECCHHCCCH--
Q ss_conf 9985500013444322222233344432111235786169853035755610021202---67614999711102997--
Q gi|254781215|r 131 WLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHH---NTYGMAIINDEASGTPD-- 205 (511)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h---~~~~~lvI~DEAsgI~d-- 205 (511)
T Consensus 88 ~~~-----~g~~v~---~~tGd~~~~~---~~~~~~~I~V~T-----~Ek~~sl~~~~~~~l~~v~~vViDEiH~i~d~~ 151 (674)
T PRK01172 88 LRS-----LGMRVK---ISIGDYDDPP---DFIKRYDVVILT-----SEKADSLIHHDPYIINDVGLIVADEIHIIGDED 151 (674)
T ss_pred HHC-----CCCEEE---EEECCCCCCC---CCCCCCCEEEEC-----HHHHHHHHHCCCHHHCCCCEEEEECCEECCCCC
T ss_conf 873-----798277---8853888980---102558999987-----899999986495022136989982652506877
Q ss_pred --HHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
Q ss_conf --88988888850799813899823899876556
Q gi|254781215|r 206 --VINLGILGFLTERNANRFWIMTSNPRRLSGKF 237 (511)
Q Consensus 206 --~i~e~i~~~Lt~~g~~~~~i~~~nP~~~~g~f 237 (511)
T Consensus 152 RG~~lE~~l~kl~~l~~~~qiIgLSATi~N~~~l 185 (674)
T PRK01172 152 RGPTLETVLSSARYVNPDARILALSATVSNANEL 185 (674)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
T ss_conf 2499999999998538660799715786899999