HHsearch alignment for GI: 254781215 and conserved domain: PRK01297

>PRK01297 ATP-dependent RNA helicase RhlB; Provisional.
Probab=96.90  E-value=0.032  Score=32.62  Aligned_cols=76  Identities=14%  Similarity=0.078  Sum_probs=55.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC--------CCEEEEEEC
Q ss_conf             565557845899999999999874056555421012465025765978999999999998089--------966999808
Q gi|254781215|r   44 PLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRP--------GISVICLAN  115 (511)
Q Consensus        44 ~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p--------~~kv~vtAp  115 (511)
T Consensus       100 ~~~Gf~~PTpIQ~~aIP~iL~----Gk--------Dvi~~A~TGSGKTlAyLLPil~~ll~~~~~~~~~~~~p~aLIL~P  167 (472)
T PRK01297        100 HDLGFPYCTPIQAQVLGYTLA----GH--------DAIGRAQTGTGKTAAFLISIINQLLQTPPPKERYMGEPRALIIAP  167 (472)
T ss_pred             HHCCCCCCCHHHHHHHHHHHC----CC--------CEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECC
T ss_conf             977999999999999999976----99--------889989998679999999999999717751011368952999879


Q ss_pred             CHHHHHHHHHHHHHHHH
Q ss_conf             58999999999999999
Q gi|254781215|r  116 SETQLKTTLWAEVSKWL  132 (511)
Q Consensus       116 t~~Q~~~ilw~Ei~k~~  132 (511)
T Consensus       168 TRELa~QI~-~~~~~L~  183 (472)
T PRK01297        168 TRELVVQIA-KDAAALT  183 (472)
T ss_pred             CHHHHHHHH-HHHHHHH
T ss_conf             999999999-9999974