HHsearch alignment for GI: 254781215 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.86 E-value=0.034 Score=32.42 Aligned_cols=155 Identities=17% Similarity=0.126 Sum_probs=78.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Q ss_conf 65557845899999999999874056555421012465025765978999999999998089966999808589999999
Q gi|254781215|r 45 LEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTL 124 (511)
Q Consensus 45 ~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~il 124 (511)
T Consensus 15 F~eIIG----Qe~iv~~L~nAI~~~RiaH-----AYLFsGPrGvGKTTlArifAkaLnC~~~~~~dpCg~C~s--C~~-- 81 (613)
T PRK05896 15 FKQIIG----QELIKKILVNAILNNKLTH-----AYIFSGPRGIGKTSIAKIFAKAINCLNPKDGDCCNSCSV--CES-- 81 (613)
T ss_pred HHHHCC----CHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH--HHH--
T ss_conf 655238----2999999999998499762-----277558998488999999999966999999998888878--999--
Q ss_pred HHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCC
Q ss_conf 99999999855000134443222222333444321112357861698530357556100212026761499971110299
Q gi|254781215|r 125 WAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTP 204 (511)
Q Consensus 125 w~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~ 204 (511)
T Consensus 82 -------I~~g~h~DviEIdaa-------------------sn~gIDeIReLie--~~~~~P~~gkyK-V~IIDEah~Ln 132 (613)
T PRK05896 82 -------INTNQSVDIVELDAA-------------------SNNGVDEIRNIID--NINYLPTTFKYK-VYIIDEAHMLS 132 (613)
T ss_pred -------HHCCCCCCEEEEECC-------------------CCCCHHHHHHHHH--HHCCCCCCCCCE-EEEECCHHHCC
T ss_conf -------856999986884065-------------------5578899999999--708587579945-99981622179
Q ss_pred HHHHHHHHHHHCCCCCC-EEEEEECCCCCCCCHHHHHH
Q ss_conf 78898888885079981-38998238998765567653
Q gi|254781215|r 205 DVINLGILGFLTERNAN-RFWIMTSNPRRLSGKFYEIF 241 (511)
Q Consensus 205 d~i~e~i~~~Lt~~g~~-~~~i~~~nP~~~~g~fy~~~ 241 (511)
T Consensus 133 ~~AaNALLKtLEEPP~~viFIL~Ttep~KLLpTIlSRC 170 (613)
T PRK05896 133 TSAWNALLKTLEEPPKHVVFIFATTEFQKIPLTIISRC 170 (613)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHCC
T ss_conf 99999999853489878379998288154937664035