HHsearch alignment for GI: 254781215 and conserved domain: PRK06871
>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=96.91 E-value=0.031 Score=32.65 Aligned_cols=153 Identities=18% Similarity=0.202 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999874056555421012465025765978999999999998089966999808589999999999999998
Q gi|254781215|r 54 WQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLS 133 (511)
Q Consensus 54 WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~ 133 (511)
T Consensus 5 Wl~~~~~~l~~~~~~~r~~H-----A~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~sC~l~---------~~g 70 (324)
T PRK06871 5 WLQPIYQQITQTFLQGRGHH-----ALLFKADSGLGTEQLIRALAQWLMCQAPGDEQPCGQCHSCHLF---------QAG 70 (324)
T ss_pred CCHHHHHHHHHHHHCCCCCE-----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH---------HCC
T ss_conf 65799999999998699543-----7876899997899999999999828999999988889899999---------738
Q ss_pred HCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHH
Q ss_conf 55000134443222222333444321112357861698530357556100212026761499971110299788988888
Q gi|254781215|r 134 LLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILG 213 (511)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~ 213 (511)
T Consensus 71 ~HPD~~~i~~~~~----k~I~vd~I---------------R~l~~--~~~~~~~~g~~K-V~iI~~ae~m~~~AaNALLK 128 (324)
T PRK06871 71 NHPDFHILEPIDG----KDIGVDQV---------------REINE--KVSQFAQQGGNK-VVYIQGAERLTEAAANALLK 128 (324)
T ss_pred CCCCEEEEECCCC----CCCCHHHH---------------HHHHH--HHHHCCCCCCCE-EEEECCHHHHHHHHHHHHHH
T ss_conf 9998799846788----87889999---------------99999--986462205966-99975888857999999999
Q ss_pred HHCCCCCCEE-EEEECCCCCCCCHHHHHHH
Q ss_conf 8507998138-9982389987655676530
Q gi|254781215|r 214 FLTERNANRF-WIMTSNPRRLSGKFYEIFN 242 (511)
Q Consensus 214 ~Lt~~g~~~~-~i~~~nP~~~~g~fy~~~~ 242 (511)
T Consensus 129 tLEEPp~~~~fiL~t~~~~~ll~TI~SRCq 158 (324)
T PRK06871 129 TLEEPRPNTYFLLQADLSASLLATIYSRCQ 158 (324)
T ss_pred HHCCCCCCEEEEEEECCCCCCCCHHHHCCC
T ss_conf 833898783899987870103240862661