HHsearch alignment for GI: 254781215 and conserved domain: PRK07133
>PRK07133 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.74 E-value=0.042 Score=31.84 Aligned_cols=139 Identities=16% Similarity=0.116 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC----EEEEEECCHHHHHHHHHHHHHH
Q ss_conf 999999999987405655542101246502576597899999999999808996----6999808589999999999999
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGI----SVICLANSETQLKTTLWAEVSK 130 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~----kv~vtApt~~Q~~~ilw~Ei~k 130 (511)
T Consensus 23 Qe~Vv~tL~nAI~~gRIaH-----AYLF~GPRGvGKTT~ARIfAKaLNC~~~~d~~~pC~~C~~~~-------------- 83 (718)
T PRK07133 23 QDHIIETLKNIIKSGKISH-----AYLFSGPHGTGKTSVAKIFANALNCSHKTDLIEPCQNCIENF-------------- 83 (718)
T ss_pred CHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCC--------------
T ss_conf 5999999999997499750-----586238998688999999999967999999999770214304--------------
Q ss_pred HHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHH
Q ss_conf 99855000134443222222333444321112357861698530357556100212026761499971110299788988
Q gi|254781215|r 131 WLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLG 210 (511)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~ 210 (511)
T Consensus 84 --~~s-------------------~DViEIDAASn~g--VDdIReLie--~v~y~P~~gkYK-VyIIDEvHMLS~~AfNA 137 (718)
T PRK07133 84 --NNN-------------------LDIIEMDAASNNG--VDEIRELRE--NVKNLPQISKYK-IYIIDEVHMLSKSAFNA 137 (718)
T ss_pred --CCC-------------------CCEEEECCCCCCC--HHHHHHHHH--HHCCCCCCCCEE-EEEEECCCCCCHHHHHH
T ss_conf --789-------------------8737754556688--899999999--825588778724-99996620079999999
Q ss_pred HHHHHCCCCCC-EEEEEECCCCCCCCHHH
Q ss_conf 88885079981-38998238998765567
Q gi|254781215|r 211 ILGFLTERNAN-RFWIMTSNPRRLSGKFY 238 (511)
Q Consensus 211 i~~~Lt~~g~~-~~~i~~~nP~~~~g~fy 238 (511)
T Consensus 138 LLKtLEEPP~hvvFILaTTep~KIP~TIl 166 (718)
T PRK07133 138 LLKTLEEPPKHVIFILATTDVQKIPLTIL 166 (718)
T ss_pred HHHHHCCCCCCCEEEEEECCHHHCCHHHH
T ss_conf 99850279878279997088254848774