HHsearch alignment for GI: 254781215 and conserved domain: PRK07246

>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=93.28  E-value=0.56  Score=24.76  Aligned_cols=78  Identities=24%  Similarity=0.238  Sum_probs=46.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
Q ss_conf             56555784589999999999987405655542101246502576597899999999999808996699980858999999
Q gi|254781215|r   44 PLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTT  123 (511)
Q Consensus        44 ~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~i  123 (511)
T Consensus       240 ~~~g~E-~R~~Q~~Ma~~V~~al~~~~--------~l~IEAgTGtGKTlaYLlPai--a~-~~~~~vVIST~T~~LQeQL  307 (820)
T PRK07246        240 ALLGLE-ERPKQEQFAQLVDEDYHDGV--------ASFIEAQTGIGKTYGYLLPLL--AQ-SDQNQIIVSVPTKLLQDQI  307 (820)
T ss_pred             CCCCCC-CCHHHHHHHHHHHHHHCCCC--------CEEEECCCCCCHHHHHHHHHH--HH-CCCCEEEEEECCHHHHHHH
T ss_conf             567986-18899999999999980588--------389988999647999999999--84-3798399990869999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999998
Q gi|254781215|r  124 LWAEVSKWLS  133 (511)
Q Consensus       124 lw~Ei~k~~~  133 (511)
T Consensus       308 ~~kDlp~L~~  317 (820)
T PRK07246        308 MAGEVKAIQE  317 (820)
T ss_pred             HHHHHHHHHH
T ss_conf             9978999999