HHsearch alignment for GI: 254781215 and conserved domain: PRK07246
>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=93.28 E-value=0.56 Score=24.76 Aligned_cols=78 Identities=24% Similarity=0.238 Sum_probs=46.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
Q ss_conf 56555784589999999999987405655542101246502576597899999999999808996699980858999999
Q gi|254781215|r 44 PLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTT 123 (511)
Q Consensus 44 ~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~i 123 (511)
T Consensus 240 ~~~g~E-~R~~Q~~Ma~~V~~al~~~~--------~l~IEAgTGtGKTlaYLlPai--a~-~~~~~vVIST~T~~LQeQL 307 (820)
T PRK07246 240 ALLGLE-ERPKQEQFAQLVDEDYHDGV--------ASFIEAQTGIGKTYGYLLPLL--AQ-SDQNQIIVSVPTKLLQDQI 307 (820)
T ss_pred CCCCCC-CCHHHHHHHHHHHHHHCCCC--------CEEEECCCCCCHHHHHHHHHH--HH-CCCCEEEEEECCHHHHHHH
T ss_conf 567986-18899999999999980588--------389988999647999999999--84-3798399990869999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999998
Q gi|254781215|r 124 LWAEVSKWLS 133 (511)
Q Consensus 124 lw~Ei~k~~~ 133 (511)
T Consensus 308 ~~kDlp~L~~ 317 (820)
T PRK07246 308 MAGEVKAIQE 317 (820)
T ss_pred HHHHHHHHHH
T ss_conf 9978999999