HHsearch alignment for GI: 254781215 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=94.41 E-value=0.35 Score=26.05 Aligned_cols=178 Identities=13% Similarity=0.169 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHCCCCC-------CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 999999999987405655-------5421012465025765978999999999998089966999808589999999999
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNN-------PNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAE 127 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~-------~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~E 127 (511)
T Consensus 10 Qe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~-~cg~--C~~C~~i---- 82 (395)
T PRK07940 10 QDAVVAELRAAARAARADSAHSAAAGSGMTHAWLFTGPPGSGRSNAARAFAAALQCTDPGVP-GCGE--CRACRTV---- 82 (395)
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC-CCCC--CHHHHHH----
T ss_conf 29999999999983634344333346876603763689987889999999999669999999-9987--8789998----
Q ss_pred HHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHH
Q ss_conf 99999855000134443222222333444321112357861698530357556100212026761499971110299788
Q gi|254781215|r 128 VSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVI 207 (511)
Q Consensus 128 i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i 207 (511)
T Consensus 83 ---~~g~hpDv~~i~-------p~~-------~~i~id------~iR~l~--~~~~~~p~~~~~k-v~ii~~a~~m~~~a 136 (395)
T PRK07940 83 ---LAGTHPDVRVVV-------PEG-------LSIGVD------EVREIV--QIAARRPTTGRWR-IVVIEDADRLTERA 136 (395)
T ss_pred ---HCCCCCCEEEEE-------CCC-------CCCCHH------HHHHHH--HHHHHCCCCCCCE-EEEEECHHHHCHHH
T ss_conf ---768998718982-------687-------768899------999999--9985273037955-99980778748999
Q ss_pred HHHHHHHHCCCCCCEEEEE-ECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHH-HHCCCCH
Q ss_conf 9888888507998138998-23899876556765303524741798404336778977899999-7518980
Q gi|254781215|r 208 NLGILGFLTERNANRFWIM-TSNPRRLSGKFYEIFNKPLDDWKRFQIDTRTVEGIDPSFHEGII-ARYGLDS 277 (511)
Q Consensus 208 ~e~i~~~Lt~~g~~~~~i~-~~nP~~~~g~fy~~~~~~~~~w~~~~i~~~~~p~~~~~~ie~~~-~~~geds 277 (511)
T Consensus 137 ~NalLKtLEEPp~~~~fiL~t~~~~~llpTI~SRcq~---------~~---f~~~~~~~i~~~L~~~~gi~~ 196 (395)
T PRK07940 137 ANALLKAVEEPPPRTVWLLCAPSVEDVLPTIRSRCRH---------VA---LRTPSVEAVADVLVRRDGVDP 196 (395)
T ss_pred HHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHEE---------CC---CCCCCHHHHHHHHHHCCCCCH
T ss_conf 9999985217888869998739978744688744000---------23---799999999999987019998