HHsearch alignment for GI: 254781215 and conserved domain: PRK08074

>PRK08074 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.

Probab=96.04  E-value=0.11  Score=29.30  Aligned_cols=76  Identities=22%  Similarity=0.239  Sum_probs=48.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Q ss_conf             65557845899999999999874056555421012465025765978999999999998089966999808589999999
Q gi|254781215|r   45 LEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTL  124 (511)
Q Consensus        45 ~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~il  124 (511)
T Consensus       254 ~~~ye-~R~~Q~~ma~~V~~al~~~~--------~l~iEApTGtGKTlaYLlPai~~A~~~-~~~vvIST~T~~LQ~QL~  323 (932)
T PRK08074        254 MPGYE-KREGQQEMMKEVYTALRDSR--------HALIEAGTGTGKTLAYLLPAAYFAKKK-EEPVIISTYTVQLQQQLL  323 (932)
T ss_pred             CCCCC-CCHHHHHHHHHHHHHHHCCC--------CEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHH
T ss_conf             77887-58789999999999985388--------479986888871368799999999975-990999916288999999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254781215|r  125 WAEVSK  130 (511)
Q Consensus       125 w~Ei~k  130 (511)
T Consensus       324 ~kdlp~  329 (932)
T PRK08074        324 EKDIPL  329 (932)
T ss_pred             HHHHHH
T ss_conf             868999