HHsearch alignment for GI: 254781215 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=93.62 E-value=0.49 Score=25.10 Aligned_cols=105 Identities=20% Similarity=0.157 Sum_probs=57.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEE-ECCHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 24650257659789999999999980899669998-08589999999999999998550001344432222223334443
Q gi|254781215|r 79 KGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICL-ANSETQLKTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDV 157 (511)
Q Consensus 79 r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vt-Apt~~Q~~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (511)
T Consensus 108 Nvil~Gp~GtGKThLA~Alg~~A~~--~G~~V~f~~~~~-------L~~~L~~a~~~~~--------------------- 157 (269)
T PRK08181 108 NLLLFGPPGGGKSHLAAAIGLALIE--NGWRVLFTRTTD-------LVQKLQVARRELQ--------------------- 157 (269)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH--CCCEEEEEEHHH-------HHHHHHHHHHCCC---------------------
T ss_conf 0899899998788999999999998--799399978999-------9999999775583---------------------
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCC------HHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 21112357861698530357556100212026761499971110299------788988888850799813899823899
Q gi|254781215|r 158 LHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTP------DVINLGILGFLTERNANRFWIMTSNPR 231 (511)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~------d~i~e~i~~~Lt~~g~~~~~i~~~nP~ 231 (511)
T Consensus 158 ----------------------~~~~~~~l~-~-~dLLIiDe~G~~~~~~~~~~~lf~lI~~Ry-e~~--S-~IITSn-- 207 (269)
T PRK08181 158 ----------------------LESAIAKLD-K-FDLLILDDLAYVTKDQAETSVLFELISARY-ERR--S-ILITAN-- 207 (269)
T ss_pred ----------------------HHHHHHHHH-C-CCEEEEHHCCCCCCCHHHHHHHHHHHHHHH-CCC--C-EEEECC--
T ss_conf ----------------------999999974-4-460122010566799899999999999985-788--8-899889--
Q ss_pred CCCCHHHHHHHC
Q ss_conf 876556765303
Q gi|254781215|r 232 RLSGKFYEIFNK 243 (511)
Q Consensus 232 ~~~g~fy~~~~~ 243 (511)
T Consensus 208 ~~~~~W~~~f~D 219 (269)
T PRK08181 208 QPFGEWNRVFPD 219 (269)
T ss_pred CCHHHHHHHCCC
T ss_conf 997788775386