HHsearch alignment for GI: 254781215 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.72 E-value=0.044 Score=31.74 Aligned_cols=149 Identities=18% Similarity=0.088 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998740565554210124650257659789999999999980899669998085899999999999999985
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL 134 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~ 134 (511)
T Consensus 19 Qe~iv~~L~nAi~~~Rl~H-----AYLFsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~--C~sC~--------~-i~~ 82 (523)
T PRK08451 19 QESVSKTLSLALDNNRLAH-----AYLFSGLRGSGKTSSARIFSRALVCEQGPSSTPCGT--CAQCQ--------A-ALE 82 (523)
T ss_pred CHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC--CHHHH--------H-HHC
T ss_conf 4999999999998599671-----587578998688999999999975999999898887--88899--------9-864
Q ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHH
Q ss_conf 50001344432222223334443211123578616985303575561002120267614999711102997889888888
Q gi|254781215|r 135 LPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGF 214 (511)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~ 214 (511)
T Consensus 83 g~hpDViEiDaasn-------------------~gID~IReLie--~~~~~P~~gryK-V~IIDEah~Lt~~A~NALLKT 140 (523)
T PRK08451 83 GRHIDIIEMDAASN-------------------RGIDDIRNLIE--QTKYKPSMARFK-IFIIDEVHMLTKEAFNALLKT 140 (523)
T ss_pred CCCCCEEEECCCCC-------------------CCHHHHHHHHH--HHCCCCCCCCEE-EEEEECCCCCCHHHHHHHHHH
T ss_conf 89998551055333-------------------68999999999--723588679727-999826030489999999997
Q ss_pred HCCCCCC-EEEEEECCCCCCCCHHHHHH
Q ss_conf 5079981-38998238998765567653
Q gi|254781215|r 215 LTERNAN-RFWIMTSNPRRLSGKFYEIF 241 (511)
Q Consensus 215 Lt~~g~~-~~~i~~~nP~~~~g~fy~~~ 241 (511)
T Consensus 141 LEEPP~~vvFILaTTep~KLp~TIlSRC 168 (523)
T PRK08451 141 LEEPPSYVKFILATTDPLKLPATILSRT 168 (523)
T ss_pred CCCCCCCCEEEEECCCHHHCHHHHHHHH
T ss_conf 0389878379997599476848887420