HHsearch alignment for GI: 254781215 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.63 E-value=0.05 Score=31.36 Aligned_cols=149 Identities=17% Similarity=0.183 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998740565554210124650257659789999999999980899669998085899999999999999985
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL 134 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~ 134 (511)
T Consensus 21 Q~~v~~~L~nal~~~rl-~ha----ylf~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~C--~~C-----~~i----~~ 84 (704)
T PRK08691 21 QEHVVKALQNALDEGRL-HHA----YLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGVC--QSC-----TQI----DA 84 (704)
T ss_pred CHHHHHHHHHHHHHCCC-CCE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC--HHH-----HHH----HC
T ss_conf 69999999999981997-523----750278987888999999999679999999978777--767-----878----55
Q ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHH
Q ss_conf 50001344432222223334443211123578616985303575561002120267614999711102997889888888
Q gi|254781215|r 135 LPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGF 214 (511)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~ 214 (511)
T Consensus 85 -----------------g~~~D~~EiDaAs~~~--vdd~R~l~~-~-~~y~P~~~~yK-VyiiDEvhmLs~~afNAlLKt 142 (704)
T PRK08691 85 -----------------GRYVDLLEIDAASNTG--IDNIREVLE-N-AQYAPTAGKYK-VYIIDEVHMLSKSAFNAMLKT 142 (704)
T ss_pred -----------------CCCCCEEEEECCCCCC--HHHHHHHHH-H-CCCCCCCCCEE-EEEEECHHHCCHHHHHHHHHH
T ss_conf -----------------8998747742454458--899999998-5-34688678535-999831544389999999986
Q ss_pred HCCCCCC-EEEEEECCCCCCCCHHHHHH
Q ss_conf 5079981-38998238998765567653
Q gi|254781215|r 215 LTERNAN-RFWIMTSNPRRLSGKFYEIF 241 (511)
Q Consensus 215 Lt~~g~~-~~~i~~~nP~~~~g~fy~~~ 241 (511)
T Consensus 143 LEEPP~~v~FilaTTdp~Klp~TIlSRC 170 (704)
T PRK08691 143 LEEPPEHVKFILATTDPHKVPVTVLSRC 170 (704)
T ss_pred HCCCCCCEEEEEECCCHHHCCHHHHHHH
T ss_conf 1479756089985488464758999888