HHsearch alignment for GI: 254781215 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=97.22 E-value=0.013 Score=34.99 Aligned_cols=153 Identities=17% Similarity=0.186 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 89999999999987405655542101246502576597899999999999808996699980858999999999999999
Q gi|254781215|r 53 SWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWL 132 (511)
Q Consensus 53 ~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~ 132 (511)
T Consensus 7 PWq~~~~~~L~~~i~~~rl~H-----A~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~---~~~-----------~~i 67 (319)
T PRK08769 7 PWQQRAFDQTVAALDAGRLGH-----GLLICGPEGLGKRAVALALAEHVLASGPDPALAQ---RTR-----------QLI 67 (319)
T ss_pred CCCHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC---HHH-----------HHH
T ss_conf 776899999999997699420-----6875899987899999999999837997976543---388-----------999
Q ss_pred HHCHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHH
Q ss_conf 85500013444322222233344-43211123578616985303575561002120267614999711102997889888
Q gi|254781215|r 133 SLLPNKHWFEMQSLSLHPAPWYS-DVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGI 211 (511)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i 211 (511)
T Consensus 68 ~~g-~HPD~~~i~----~~~~~~~~k~k~~I~Id------qiR~l~~--~~~~~p~~g~~K-V~IId~Ad~mn~~AaNal 133 (319)
T PRK08769 68 AAG-THPDLQLVS----FIPNRTGDKLRTEIVIE------QVREISQ--KLALTPQYGIAQ-VVIVDPADAINRSACNAL 133 (319)
T ss_pred HCC-CCCCEEEEE----CCCCCCCCCCCCCCCHH------HHHHHHH--HHHHCCCCCCCE-EEEECCHHHCCHHHHHHH
T ss_conf 668-998968775----34444543112348699------9999999--961372027956-999806675289999999
Q ss_pred HHHHCCCCCCEEEEEE-CCCCCCCCHHH
Q ss_conf 8885079981389982-38998765567
Q gi|254781215|r 212 LGFLTERNANRFWIMT-SNPRRLSGKFY 238 (511)
Q Consensus 212 ~~~Lt~~g~~~~~i~~-~nP~~~~g~fy 238 (511)
T Consensus 134 LK~LEEPp~~~~~iL~~~~~~~ll~TI~ 161 (319)
T PRK08769 134 LKTLEEPSPGRYLWLISAQPARLPATIR 161 (319)
T ss_pred HHHHCCCCCCEEEEEEECCHHHCCHHHH
T ss_conf 9982279988489998699365824776