HHsearch alignment for GI: 254781215 and conserved domain: PRK08853

>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.00  E-value=0.11  Score=29.16  Aligned_cols=149  Identities=17%  Similarity=0.165  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999998740565554210124650257659789999999999980899669998085899999999999999985
Q gi|254781215|r   55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL  134 (511)
Q Consensus        55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~  134 (511)
T Consensus        21 Q~~v~~~L~nal~~~rl~h-----aylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C--~----~C-~~i~----~   84 (717)
T PRK08853         21 QSHVLTALENALAHNRLHH-----AYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQC--A----TC-KEID----E   84 (717)
T ss_pred             CHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC--C----CH-HHHH----C
T ss_conf             5999999999997099740-----5761088988898999999998678999999978887--0----26-7674----4


Q ss_pred             CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHH
Q ss_conf             50001344432222223334443211123578616985303575561002120267614999711102997889888888
Q gi|254781215|r  135 LPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGF  214 (511)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~  214 (511)
T Consensus        85 -----------------g~~~d~~EiDaAs~~~--vdd~rel~-~~-~~y~p~~~~yK-vyiiDEvHmls~~afnAlLKt  142 (717)
T PRK08853         85 -----------------GRFVDLLEIDAASRTK--VEDTRELL-DN-VQYKPARGRFK-VYLIDEVHMLSRHSFNALLKT  142 (717)
T ss_pred             -----------------CCCCCEEEECCCCCCC--HHHHHHHH-HH-CCCCCCCCCEE-EEEEECHHHCCHHHHHHHHHH
T ss_conf             -----------------7877524540565678--89999999-85-55488778547-999830544389999999876


Q ss_pred             HCCCCCCE-EEEEECCCCCCCCHHHHHH
Q ss_conf             50799813-8998238998765567653
Q gi|254781215|r  215 LTERNANR-FWIMTSNPRRLSGKFYEIF  241 (511)
Q Consensus       215 Lt~~g~~~-~~i~~~nP~~~~g~fy~~~  241 (511)
T Consensus       143 lEEPP~hv~FilaTT~~~kip~TilSRc  170 (717)
T PRK08853        143 LEEPPEYVKFLLATTDPQKLPVTILSRC  170 (717)
T ss_pred             HCCCCCCEEEEEECCCHHHCCHHHHHHH
T ss_conf             0378756489984387343738898765